data_2J49 # _entry.id 2J49 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2J49 PDBE EBI-29847 WWPDB D_1290029847 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2J4B _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'CRYSTAL STRUCTURE OF ENCEPHALITOZOON CUNICULI TAF5 N-TERMINAL DOMAIN' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2J49 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-08-28 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Romier, C.' 1 'James, N.' 2 'Birck, C.' 3 'Cavarelli, J.' 4 'Vivares, C.' 5 'Collart, M.A.' 6 'Moras, D.' 7 # _citation.id primary _citation.title ;Crystal Structure, Biochemical and Genetic Characterization of Yeast and E. Cuniculi Taf(II)5 N-Terminal Domain: Implications for TFIID Assembly. ; _citation.journal_abbrev J.Mol.Biol. _citation.journal_volume 368 _citation.page_first 1292 _citation.page_last ? _citation.year 2007 _citation.journal_id_ASTM JMOBAK _citation.country UK _citation.journal_id_ISSN 0022-2836 _citation.journal_id_CSD 0070 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17397863 _citation.pdbx_database_id_DOI 10.1016/J.JMB.2007.02.039 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Romier, C.' 1 primary 'James, N.' 2 primary 'Birck, C.' 3 primary 'Cavarelli, J.' 4 primary 'Vivares, C.' 5 primary 'Collart, M.A.' 6 primary 'Moras, D.' 7 # _cell.entry_id 2J49 _cell.length_a 91.340 _cell.length_b 91.340 _cell.length_c 55.240 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2J49 _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 5' 17282.674 1 ? ? 'N-TERMINAL DOMAIN, RESIDUES 147-290' ? 2 water nat water 18.015 37 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'TBP-ASSOCIATED FACTOR 5, TBP-ASSOCIATED FACTOR 90 KDA, TAFII-90' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMNAPENYIRAYSMLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKNPVYARRFFDRFSPDFKDFHGSEINRLFSV NSIDHIKENEVASAFQSHKYRITMSKTTLNLLLYFLNENESIGGSLIISVINQHLDPNIVESVTAREK ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMNAPENYIRAYSMLKNWVDSSLEIYKPELSYIMYPIFIYLFLNLVAKNPVYARRFFDRFSPDFKDFHGSEINRLFSV NSIDHIKENEVASAFQSHKYRITMSKTTLNLLLYFLNENESIGGSLIISVINQHLDPNIVESVTAREK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ASN n 1 6 ALA n 1 7 PRO n 1 8 GLU n 1 9 ASN n 1 10 TYR n 1 11 ILE n 1 12 ARG n 1 13 ALA n 1 14 TYR n 1 15 SER n 1 16 MET n 1 17 LEU n 1 18 LYS n 1 19 ASN n 1 20 TRP n 1 21 VAL n 1 22 ASP n 1 23 SER n 1 24 SER n 1 25 LEU n 1 26 GLU n 1 27 ILE n 1 28 TYR n 1 29 LYS n 1 30 PRO n 1 31 GLU n 1 32 LEU n 1 33 SER n 1 34 TYR n 1 35 ILE n 1 36 MET n 1 37 TYR n 1 38 PRO n 1 39 ILE n 1 40 PHE n 1 41 ILE n 1 42 TYR n 1 43 LEU n 1 44 PHE n 1 45 LEU n 1 46 ASN n 1 47 LEU n 1 48 VAL n 1 49 ALA n 1 50 LYS n 1 51 ASN n 1 52 PRO n 1 53 VAL n 1 54 TYR n 1 55 ALA n 1 56 ARG n 1 57 ARG n 1 58 PHE n 1 59 PHE n 1 60 ASP n 1 61 ARG n 1 62 PHE n 1 63 SER n 1 64 PRO n 1 65 ASP n 1 66 PHE n 1 67 LYS n 1 68 ASP n 1 69 PHE n 1 70 HIS n 1 71 GLY n 1 72 SER n 1 73 GLU n 1 74 ILE n 1 75 ASN n 1 76 ARG n 1 77 LEU n 1 78 PHE n 1 79 SER n 1 80 VAL n 1 81 ASN n 1 82 SER n 1 83 ILE n 1 84 ASP n 1 85 HIS n 1 86 ILE n 1 87 LYS n 1 88 GLU n 1 89 ASN n 1 90 GLU n 1 91 VAL n 1 92 ALA n 1 93 SER n 1 94 ALA n 1 95 PHE n 1 96 GLN n 1 97 SER n 1 98 HIS n 1 99 LYS n 1 100 TYR n 1 101 ARG n 1 102 ILE n 1 103 THR n 1 104 MET n 1 105 SER n 1 106 LYS n 1 107 THR n 1 108 THR n 1 109 LEU n 1 110 ASN n 1 111 LEU n 1 112 LEU n 1 113 LEU n 1 114 TYR n 1 115 PHE n 1 116 LEU n 1 117 ASN n 1 118 GLU n 1 119 ASN n 1 120 GLU n 1 121 SER n 1 122 ILE n 1 123 GLY n 1 124 GLY n 1 125 SER n 1 126 LEU n 1 127 ILE n 1 128 ILE n 1 129 SER n 1 130 VAL n 1 131 ILE n 1 132 ASN n 1 133 GLN n 1 134 HIS n 1 135 LEU n 1 136 ASP n 1 137 PRO n 1 138 ASN n 1 139 ILE n 1 140 VAL n 1 141 GLU n 1 142 SER n 1 143 VAL n 1 144 THR n 1 145 ALA n 1 146 ARG n 1 147 GLU n 1 148 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;BAKER'S YEAST ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'SACCHAROMYCES CEREVISIAE' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2J49 1 ? ? 2J49 ? 2 UNP TAF5_YEAST 1 ? ? P38129 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2J49 A 1 ? 4 ? 2J49 143 ? 146 ? 143 146 2 2 2J49 A 5 ? 148 ? P38129 147 ? 290 ? 147 290 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2J49 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.75 _exptl_crystal.density_percent_sol 54.88 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.50 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.05 M CACODYLATE PH 6.5,2.4 M NA FORMATE' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2004-03-07 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.973178 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE BM30A' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline BM30A _diffrn_source.pdbx_wavelength 0.973178 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2J49 _reflns.observed_criterion_sigma_I 2.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.000 _reflns.d_resolution_high 2.300 _reflns.number_obs 7594 _reflns.number_all ? _reflns.percent_possible_obs 99.0 _reflns.pdbx_Rmerge_I_obs 0.04000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 42.0000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.500 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.35 _reflns_shell.percent_possible_all 99.0 _reflns_shell.Rmerge_I_obs 0.20000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 4.700 _reflns_shell.pdbx_redundancy 3.20 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2J49 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 6781 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.64 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 99.4 _refine.ls_R_factor_obs 0.221 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.215 _refine.ls_R_factor_R_free 0.270 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 10.600 _refine.ls_number_reflns_R_free 807 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.941 _refine.correlation_coeff_Fo_to_Fc_free 0.906 _refine.B_iso_mean 57.97 _refine.aniso_B[1][1] 1.48000 _refine.aniso_B[2][2] 1.48000 _refine.aniso_B[3][3] -2.22000 _refine.aniso_B[1][2] 0.74000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.376 _refine.pdbx_overall_ESU_R_Free 0.266 _refine.overall_SU_ML 0.209 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 17.315 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1116 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 37 _refine_hist.number_atoms_total 1153 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 45.64 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 1146 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.157 1.947 ? 1552 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.261 5.000 ? 133 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.305 23.793 ? 58 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.966 15.000 ? 197 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 20.441 15.000 ? 6 'X-RAY DIFFRACTION' ? r_chiral_restr 0.086 0.200 ? 169 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.004 0.020 ? 870 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.195 0.200 ? 529 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.308 0.200 ? 804 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.149 0.200 ? 43 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.197 0.200 ? 27 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.113 0.200 ? 7 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.572 1.500 ? 695 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 0.926 2.000 ? 1096 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.253 3.000 ? 519 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 1.860 4.500 ? 456 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.30 _refine_ls_shell.d_res_low 2.36 _refine_ls_shell.number_reflns_R_work 509 _refine_ls_shell.R_factor_R_work 0.2450 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3340 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 55 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2J49 _struct.title 'Crystal structure of yeast TAF5 N-terminal domain' _struct.pdbx_descriptor 'TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 5' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2J49 _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text 'TRANSCRIPTION, NUCLEAR PROTEIN, TRANSCRIPTION REGULATION, TAF5, TFIID, WD REPEAT, INITIATION' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 9 ? SER A 23 ? ASN A 151 SER A 165 1 ? 15 HELX_P HELX_P2 2 TYR A 28 ? ASN A 51 ? TYR A 170 ASN A 193 1 ? 24 HELX_P HELX_P3 3 ASN A 51 ? SER A 63 ? ASN A 193 SER A 205 1 ? 13 HELX_P HELX_P4 4 PHE A 66 ? ARG A 76 ? PHE A 208 ARG A 218 1 ? 11 HELX_P HELX_P5 5 SER A 82 ? ASN A 89 ? SER A 224 ASN A 231 1 ? 8 HELX_P HELX_P6 6 ASN A 89 ? SER A 97 ? ASN A 231 SER A 239 1 ? 9 HELX_P HELX_P7 7 SER A 105 ? ASN A 119 ? SER A 247 ASN A 261 1 ? 15 HELX_P HELX_P8 8 GLU A 120 ? ILE A 122 ? GLU A 262 ILE A 264 5 ? 3 HELX_P HELX_P9 9 GLY A 123 ? HIS A 134 ? GLY A 265 HIS A 276 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 TYR A 100 ? MET A 104 ? TYR A 242 MET A 246 AA 2 LEU A 135 ? ILE A 139 ? LEU A 277 ILE A 281 # _pdbx_struct_sheet_hbond.sheet_id AA _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 102 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 244 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id ASP _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 136 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id ASP _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 278 # _database_PDB_matrix.entry_id 2J49 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2J49 _atom_sites.fract_transf_matrix[1][1] 0.010948 _atom_sites.fract_transf_matrix[1][2] 0.006321 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012642 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.018103 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 143 ? ? ? A . n A 1 2 SER 2 144 ? ? ? A . n A 1 3 HIS 3 145 ? ? ? A . n A 1 4 MET 4 146 ? ? ? A . n A 1 5 ASN 5 147 ? ? ? A . n A 1 6 ALA 6 148 ? ? ? A . n A 1 7 PRO 7 149 149 PRO PRO A . n A 1 8 GLU 8 150 150 GLU GLU A . n A 1 9 ASN 9 151 151 ASN ASN A . n A 1 10 TYR 10 152 152 TYR TYR A . n A 1 11 ILE 11 153 153 ILE ILE A . n A 1 12 ARG 12 154 154 ARG ARG A . n A 1 13 ALA 13 155 155 ALA ALA A . n A 1 14 TYR 14 156 156 TYR TYR A . n A 1 15 SER 15 157 157 SER SER A . n A 1 16 MET 16 158 158 MET MET A . n A 1 17 LEU 17 159 159 LEU LEU A . n A 1 18 LYS 18 160 160 LYS LYS A . n A 1 19 ASN 19 161 161 ASN ASN A . n A 1 20 TRP 20 162 162 TRP TRP A . n A 1 21 VAL 21 163 163 VAL VAL A . n A 1 22 ASP 22 164 164 ASP ASP A . n A 1 23 SER 23 165 165 SER SER A . n A 1 24 SER 24 166 166 SER SER A . n A 1 25 LEU 25 167 167 LEU LEU A . n A 1 26 GLU 26 168 168 GLU GLU A . n A 1 27 ILE 27 169 169 ILE ILE A . n A 1 28 TYR 28 170 170 TYR TYR A . n A 1 29 LYS 29 171 171 LYS LYS A . n A 1 30 PRO 30 172 172 PRO PRO A . n A 1 31 GLU 31 173 173 GLU GLU A . n A 1 32 LEU 32 174 174 LEU LEU A . n A 1 33 SER 33 175 175 SER SER A . n A 1 34 TYR 34 176 176 TYR TYR A . n A 1 35 ILE 35 177 177 ILE ILE A . n A 1 36 MET 36 178 178 MET MET A . n A 1 37 TYR 37 179 179 TYR TYR A . n A 1 38 PRO 38 180 180 PRO PRO A . n A 1 39 ILE 39 181 181 ILE ILE A . n A 1 40 PHE 40 182 182 PHE PHE A . n A 1 41 ILE 41 183 183 ILE ILE A . n A 1 42 TYR 42 184 184 TYR TYR A . n A 1 43 LEU 43 185 185 LEU LEU A . n A 1 44 PHE 44 186 186 PHE PHE A . n A 1 45 LEU 45 187 187 LEU LEU A . n A 1 46 ASN 46 188 188 ASN ASN A . n A 1 47 LEU 47 189 189 LEU LEU A . n A 1 48 VAL 48 190 190 VAL VAL A . n A 1 49 ALA 49 191 191 ALA ALA A . n A 1 50 LYS 50 192 192 LYS LYS A . n A 1 51 ASN 51 193 193 ASN ASN A . n A 1 52 PRO 52 194 194 PRO PRO A . n A 1 53 VAL 53 195 195 VAL VAL A . n A 1 54 TYR 54 196 196 TYR TYR A . n A 1 55 ALA 55 197 197 ALA ALA A . n A 1 56 ARG 56 198 198 ARG ARG A . n A 1 57 ARG 57 199 199 ARG ARG A . n A 1 58 PHE 58 200 200 PHE PHE A . n A 1 59 PHE 59 201 201 PHE PHE A . n A 1 60 ASP 60 202 202 ASP ASP A . n A 1 61 ARG 61 203 203 ARG ARG A . n A 1 62 PHE 62 204 204 PHE PHE A . n A 1 63 SER 63 205 205 SER SER A . n A 1 64 PRO 64 206 206 PRO PRO A . n A 1 65 ASP 65 207 207 ASP ASP A . n A 1 66 PHE 66 208 208 PHE PHE A . n A 1 67 LYS 67 209 209 LYS LYS A . n A 1 68 ASP 68 210 210 ASP ASP A . n A 1 69 PHE 69 211 211 PHE PHE A . n A 1 70 HIS 70 212 212 HIS HIS A . n A 1 71 GLY 71 213 213 GLY GLY A . n A 1 72 SER 72 214 214 SER SER A . n A 1 73 GLU 73 215 215 GLU GLU A . n A 1 74 ILE 74 216 216 ILE ILE A . n A 1 75 ASN 75 217 217 ASN ASN A . n A 1 76 ARG 76 218 218 ARG ARG A . n A 1 77 LEU 77 219 219 LEU LEU A . n A 1 78 PHE 78 220 220 PHE PHE A . n A 1 79 SER 79 221 221 SER SER A . n A 1 80 VAL 80 222 222 VAL VAL A . n A 1 81 ASN 81 223 223 ASN ASN A . n A 1 82 SER 82 224 224 SER SER A . n A 1 83 ILE 83 225 225 ILE ILE A . n A 1 84 ASP 84 226 226 ASP ASP A . n A 1 85 HIS 85 227 227 HIS HIS A . n A 1 86 ILE 86 228 228 ILE ILE A . n A 1 87 LYS 87 229 229 LYS LYS A . n A 1 88 GLU 88 230 230 GLU GLU A . n A 1 89 ASN 89 231 231 ASN ASN A . n A 1 90 GLU 90 232 232 GLU GLU A . n A 1 91 VAL 91 233 233 VAL VAL A . n A 1 92 ALA 92 234 234 ALA ALA A . n A 1 93 SER 93 235 235 SER SER A . n A 1 94 ALA 94 236 236 ALA ALA A . n A 1 95 PHE 95 237 237 PHE PHE A . n A 1 96 GLN 96 238 238 GLN GLN A . n A 1 97 SER 97 239 239 SER SER A . n A 1 98 HIS 98 240 240 HIS HIS A . n A 1 99 LYS 99 241 241 LYS LYS A . n A 1 100 TYR 100 242 242 TYR TYR A . n A 1 101 ARG 101 243 243 ARG ARG A . n A 1 102 ILE 102 244 244 ILE ILE A . n A 1 103 THR 103 245 245 THR THR A . n A 1 104 MET 104 246 246 MET MET A . n A 1 105 SER 105 247 247 SER SER A . n A 1 106 LYS 106 248 248 LYS LYS A . n A 1 107 THR 107 249 249 THR THR A . n A 1 108 THR 108 250 250 THR THR A . n A 1 109 LEU 109 251 251 LEU LEU A . n A 1 110 ASN 110 252 252 ASN ASN A . n A 1 111 LEU 111 253 253 LEU LEU A . n A 1 112 LEU 112 254 254 LEU LEU A . n A 1 113 LEU 113 255 255 LEU LEU A . n A 1 114 TYR 114 256 256 TYR TYR A . n A 1 115 PHE 115 257 257 PHE PHE A . n A 1 116 LEU 116 258 258 LEU LEU A . n A 1 117 ASN 117 259 259 ASN ASN A . n A 1 118 GLU 118 260 260 GLU GLU A . n A 1 119 ASN 119 261 261 ASN ASN A . n A 1 120 GLU 120 262 262 GLU GLU A . n A 1 121 SER 121 263 263 SER SER A . n A 1 122 ILE 122 264 264 ILE ILE A . n A 1 123 GLY 123 265 265 GLY GLY A . n A 1 124 GLY 124 266 266 GLY GLY A . n A 1 125 SER 125 267 267 SER SER A . n A 1 126 LEU 126 268 268 LEU LEU A . n A 1 127 ILE 127 269 269 ILE ILE A . n A 1 128 ILE 128 270 270 ILE ILE A . n A 1 129 SER 129 271 271 SER SER A . n A 1 130 VAL 130 272 272 VAL VAL A . n A 1 131 ILE 131 273 273 ILE ILE A . n A 1 132 ASN 132 274 274 ASN ASN A . n A 1 133 GLN 133 275 275 GLN GLN A . n A 1 134 HIS 134 276 276 HIS HIS A . n A 1 135 LEU 135 277 277 LEU LEU A . n A 1 136 ASP 136 278 278 ASP ASP A . n A 1 137 PRO 137 279 279 PRO PRO A . n A 1 138 ASN 138 280 280 ASN ASN A . n A 1 139 ILE 139 281 281 ILE ILE A . n A 1 140 VAL 140 282 282 VAL VAL A . n A 1 141 GLU 141 283 ? ? ? A . n A 1 142 SER 142 284 ? ? ? A . n A 1 143 VAL 143 285 ? ? ? A . n A 1 144 THR 144 286 ? ? ? A . n A 1 145 ALA 145 287 ? ? ? A . n A 1 146 ARG 146 288 ? ? ? A . n A 1 147 GLU 147 289 ? ? ? A . n A 1 148 LYS 148 290 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 2001 2001 HOH HOH A . B 2 HOH 2 2002 2002 HOH HOH A . B 2 HOH 3 2003 2003 HOH HOH A . B 2 HOH 4 2004 2004 HOH HOH A . B 2 HOH 5 2005 2005 HOH HOH A . B 2 HOH 6 2006 2006 HOH HOH A . B 2 HOH 7 2007 2007 HOH HOH A . B 2 HOH 8 2008 2008 HOH HOH A . B 2 HOH 9 2009 2009 HOH HOH A . B 2 HOH 10 2010 2010 HOH HOH A . B 2 HOH 11 2011 2011 HOH HOH A . B 2 HOH 12 2012 2012 HOH HOH A . B 2 HOH 13 2013 2013 HOH HOH A . B 2 HOH 14 2014 2014 HOH HOH A . B 2 HOH 15 2015 2015 HOH HOH A . B 2 HOH 16 2016 2016 HOH HOH A . B 2 HOH 17 2017 2017 HOH HOH A . B 2 HOH 18 2018 2018 HOH HOH A . B 2 HOH 19 2019 2019 HOH HOH A . B 2 HOH 20 2020 2020 HOH HOH A . B 2 HOH 21 2021 2021 HOH HOH A . B 2 HOH 22 2022 2022 HOH HOH A . B 2 HOH 23 2023 2023 HOH HOH A . B 2 HOH 24 2024 2024 HOH HOH A . B 2 HOH 25 2025 2025 HOH HOH A . B 2 HOH 26 2026 2026 HOH HOH A . B 2 HOH 27 2027 2027 HOH HOH A . B 2 HOH 28 2028 2028 HOH HOH A . B 2 HOH 29 2029 2029 HOH HOH A . B 2 HOH 30 2030 2030 HOH HOH A . B 2 HOH 31 2031 2031 HOH HOH A . B 2 HOH 32 2032 2032 HOH HOH A . B 2 HOH 33 2033 2033 HOH HOH A . B 2 HOH 34 2034 2034 HOH HOH A . B 2 HOH 35 2035 2035 HOH HOH A . B 2 HOH 36 2036 2036 HOH HOH A . B 2 HOH 37 2037 2037 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-10 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 28.5750 _pdbx_refine_tls.origin_y 32.5200 _pdbx_refine_tls.origin_z 54.1710 _pdbx_refine_tls.T[1][1] -0.4535 _pdbx_refine_tls.T[2][2] -0.4416 _pdbx_refine_tls.T[3][3] -0.1024 _pdbx_refine_tls.T[1][2] 0.0249 _pdbx_refine_tls.T[1][3] 0.0337 _pdbx_refine_tls.T[2][3] -0.0202 _pdbx_refine_tls.L[1][1] 6.7694 _pdbx_refine_tls.L[2][2] 4.3537 _pdbx_refine_tls.L[3][3] 5.2113 _pdbx_refine_tls.L[1][2] 1.6449 _pdbx_refine_tls.L[1][3] 1.2123 _pdbx_refine_tls.L[2][3] 0.1752 _pdbx_refine_tls.S[1][1] -0.3166 _pdbx_refine_tls.S[1][2] -0.0433 _pdbx_refine_tls.S[1][3] 0.3952 _pdbx_refine_tls.S[2][1] -0.1427 _pdbx_refine_tls.S[2][2] 0.3348 _pdbx_refine_tls.S[2][3] -0.2129 _pdbx_refine_tls.S[3][1] -0.2731 _pdbx_refine_tls.S[3][2] -0.2711 _pdbx_refine_tls.S[3][3] -0.0182 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 151 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 282 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data reduction' . ? 1 HKL-2000 'data scaling' . ? 2 SHARP phasing . ? 3 SOLOMON phasing . ? 4 REFMAC refinement 5.2.0019 ? 5 # _pdbx_entry_details.entry_id 2J49 _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE FIRST 4 RESIDUES REPRESENT THE THROMBIN CUTTING SITE (GS) AND THE NDEL CLONING SITE (HM) AND ARE NOT PART OF THE FULL PROTEIN. THESE RESIDUES ARE MAPPED TO THE PDB ENTRY. ; # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 143 ? A GLY 1 2 1 Y 1 A SER 144 ? A SER 2 3 1 Y 1 A HIS 145 ? A HIS 3 4 1 Y 1 A MET 146 ? A MET 4 5 1 Y 1 A ASN 147 ? A ASN 5 6 1 Y 1 A ALA 148 ? A ALA 6 7 1 Y 1 A GLU 283 ? A GLU 141 8 1 Y 1 A SER 284 ? A SER 142 9 1 Y 1 A VAL 285 ? A VAL 143 10 1 Y 1 A THR 286 ? A THR 144 11 1 Y 1 A ALA 287 ? A ALA 145 12 1 Y 1 A ARG 288 ? A ARG 146 13 1 Y 1 A GLU 289 ? A GLU 147 14 1 Y 1 A LYS 290 ? A LYS 148 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #