data_2J5D # _entry.id 2J5D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.392 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2J5D pdb_00002j5d 10.2210/pdb2j5d/pdb PDBE EBI-29911 ? ? WWPDB D_1290029911 ? ? BMRB 7288 ? 10.13018/BMR7288 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-04-17 2 'Structure model' 1 1 2011-05-08 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2018-02-28 5 'Structure model' 1 4 2020-01-15 6 'Structure model' 1 5 2024-05-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Database references' 4 4 'Structure model' 'Source and taxonomy' 5 5 'Structure model' Other 6 6 'Structure model' 'Data collection' 7 6 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' citation 2 4 'Structure model' entity_src_gen 3 5 'Structure model' pdbx_database_status 4 6 'Structure model' chem_comp_atom 5 6 'Structure model' chem_comp_bond 6 6 'Structure model' database_2 # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation.journal_abbrev' 2 4 'Structure model' '_citation.page_last' 3 4 'Structure model' '_citation.pdbx_database_id_DOI' 4 4 'Structure model' '_citation.title' 5 4 'Structure model' '_entity_src_gen.pdbx_host_org_cell_line' 6 4 'Structure model' '_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id' 7 4 'Structure model' '_entity_src_gen.pdbx_host_org_scientific_name' 8 4 'Structure model' '_entity_src_gen.pdbx_host_org_variant' 9 5 'Structure model' '_pdbx_database_status.status_code_cs' 10 5 'Structure model' '_pdbx_database_status.status_code_mr' 11 6 'Structure model' '_database_2.pdbx_DOI' 12 6 'Structure model' '_database_2.pdbx_database_accession' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2J5D _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-09-14 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_cs REL _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_id 7288 _pdbx_database_related.details . _pdbx_database_related.db_name BMRB _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Bocharov, E.V.' 1 ? 'Pustovalova, Y.E.' 2 ? 'Volynsky, P.E.' 3 ? 'Maslennikov, I.V.' 4 ? 'Goncharuk, M.V.' 5 ? 'Ermolyuk, Y.S.' 6 ? 'Arseniev, A.S.' 7 ? # _citation.id primary _citation.title 'Unique dimeric structure of BNip3 transmembrane domain suggests membrane permeabilization as a cell death trigger.' _citation.journal_abbrev 'J. Biol. Chem.' _citation.journal_volume 282 _citation.page_first 16256 _citation.page_last 16266 _citation.year 2007 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17412696 _citation.pdbx_database_id_DOI 10.1074/jbc.M701745200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bocharov, E.V.' 1 ? primary 'Pustovalova, Y.E.' 2 ? primary 'Pavlov, K.V.' 3 ? primary 'Volynsky, P.E.' 4 ? primary 'Goncharuk, M.V.' 5 ? primary 'Ermolyuk, Y.S.' 6 ? primary 'Karpunin, D.V.' 7 ? primary 'Schulga, A.A.' 8 ? primary 'Kirpichnikov, M.P.' 9 ? primary 'Efremov, R.G.' 10 ? primary 'Maslennikov, I.V.' 11 ? primary 'Arseniev, A.S.' 12 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'BCL2/ADENOVIRUS E1B 19 KDA PROTEIN-INTERACTING PROTEIN 3' _entity.formula_weight 4926.933 _entity.pdbx_number_of_molecules 2 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'HOMODIMERIC TRANSMEMBRANE DOMAIN, RESIDUES 146-190' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name 'BNIP3 TM' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code RNTSVMKKGGIFSAEFLKVFLPSLLLSHLLAIGLGIYIGRRLTTS _entity_poly.pdbx_seq_one_letter_code_can RNTSVMKKGGIFSAEFLKVFLPSLLLSHLLAIGLGIYIGRRLTTS _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ARG n 1 2 ASN n 1 3 THR n 1 4 SER n 1 5 VAL n 1 6 MET n 1 7 LYS n 1 8 LYS n 1 9 GLY n 1 10 GLY n 1 11 ILE n 1 12 PHE n 1 13 SER n 1 14 ALA n 1 15 GLU n 1 16 PHE n 1 17 LEU n 1 18 LYS n 1 19 VAL n 1 20 PHE n 1 21 LEU n 1 22 PRO n 1 23 SER n 1 24 LEU n 1 25 LEU n 1 26 LEU n 1 27 SER n 1 28 HIS n 1 29 LEU n 1 30 LEU n 1 31 ALA n 1 32 ILE n 1 33 GLY n 1 34 LEU n 1 35 GLY n 1 36 ILE n 1 37 TYR n 1 38 ILE n 1 39 GLY n 1 40 ARG n 1 41 ARG n 1 42 LEU n 1 43 THR n 1 44 THR n 1 45 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant pLysS _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector PGEMEX1 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'MITOCHONDIONAL PROTEIN FROM BCL-2 FAMILY' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ARG 1 146 146 ARG ARG A . n A 1 2 ASN 2 147 147 ASN ASN A . n A 1 3 THR 3 148 148 THR THR A . n A 1 4 SER 4 149 149 SER SER A . n A 1 5 VAL 5 150 150 VAL VAL A . n A 1 6 MET 6 151 151 MET MET A . n A 1 7 LYS 7 152 152 LYS LYS A . n A 1 8 LYS 8 153 153 LYS LYS A . n A 1 9 GLY 9 154 154 GLY GLY A . n A 1 10 GLY 10 155 155 GLY GLY A . n A 1 11 ILE 11 156 156 ILE ILE A . n A 1 12 PHE 12 157 157 PHE PHE A . n A 1 13 SER 13 158 158 SER SER A . n A 1 14 ALA 14 159 159 ALA ALA A . n A 1 15 GLU 15 160 160 GLU GLU A . n A 1 16 PHE 16 161 161 PHE PHE A . n A 1 17 LEU 17 162 162 LEU LEU A . n A 1 18 LYS 18 163 163 LYS LYS A . n A 1 19 VAL 19 164 164 VAL VAL A . n A 1 20 PHE 20 165 165 PHE PHE A . n A 1 21 LEU 21 166 166 LEU LEU A . n A 1 22 PRO 22 167 167 PRO PRO A . n A 1 23 SER 23 168 168 SER SER A . n A 1 24 LEU 24 169 169 LEU LEU A . n A 1 25 LEU 25 170 170 LEU LEU A . n A 1 26 LEU 26 171 171 LEU LEU A . n A 1 27 SER 27 172 172 SER SER A . n A 1 28 HIS 28 173 173 HIS HIS A . n A 1 29 LEU 29 174 174 LEU LEU A . n A 1 30 LEU 30 175 175 LEU LEU A . n A 1 31 ALA 31 176 176 ALA ALA A . n A 1 32 ILE 32 177 177 ILE ILE A . n A 1 33 GLY 33 178 178 GLY GLY A . n A 1 34 LEU 34 179 179 LEU LEU A . n A 1 35 GLY 35 180 180 GLY GLY A . n A 1 36 ILE 36 181 181 ILE ILE A . n A 1 37 TYR 37 182 182 TYR TYR A . n A 1 38 ILE 38 183 183 ILE ILE A . n A 1 39 GLY 39 184 184 GLY GLY A . n A 1 40 ARG 40 185 185 ARG ARG A . n A 1 41 ARG 41 186 186 ARG ARG A . n A 1 42 LEU 42 187 187 LEU LEU A . n A 1 43 THR 43 188 188 THR THR A . n A 1 44 THR 44 189 189 THR THR A . n A 1 45 SER 45 190 190 SER SER A . n B 1 1 ARG 1 146 146 ARG ARG B . n B 1 2 ASN 2 147 147 ASN ASN B . n B 1 3 THR 3 148 148 THR THR B . n B 1 4 SER 4 149 149 SER SER B . n B 1 5 VAL 5 150 150 VAL VAL B . n B 1 6 MET 6 151 151 MET MET B . n B 1 7 LYS 7 152 152 LYS LYS B . n B 1 8 LYS 8 153 153 LYS LYS B . n B 1 9 GLY 9 154 154 GLY GLY B . n B 1 10 GLY 10 155 155 GLY GLY B . n B 1 11 ILE 11 156 156 ILE ILE B . n B 1 12 PHE 12 157 157 PHE PHE B . n B 1 13 SER 13 158 158 SER SER B . n B 1 14 ALA 14 159 159 ALA ALA B . n B 1 15 GLU 15 160 160 GLU GLU B . n B 1 16 PHE 16 161 161 PHE PHE B . n B 1 17 LEU 17 162 162 LEU LEU B . n B 1 18 LYS 18 163 163 LYS LYS B . n B 1 19 VAL 19 164 164 VAL VAL B . n B 1 20 PHE 20 165 165 PHE PHE B . n B 1 21 LEU 21 166 166 LEU LEU B . n B 1 22 PRO 22 167 167 PRO PRO B . n B 1 23 SER 23 168 168 SER SER B . n B 1 24 LEU 24 169 169 LEU LEU B . n B 1 25 LEU 25 170 170 LEU LEU B . n B 1 26 LEU 26 171 171 LEU LEU B . n B 1 27 SER 27 172 172 SER SER B . n B 1 28 HIS 28 173 173 HIS HIS B . n B 1 29 LEU 29 174 174 LEU LEU B . n B 1 30 LEU 30 175 175 LEU LEU B . n B 1 31 ALA 31 176 176 ALA ALA B . n B 1 32 ILE 32 177 177 ILE ILE B . n B 1 33 GLY 33 178 178 GLY GLY B . n B 1 34 LEU 34 179 179 LEU LEU B . n B 1 35 GLY 35 180 180 GLY GLY B . n B 1 36 ILE 36 181 181 ILE ILE B . n B 1 37 TYR 37 182 182 TYR TYR B . n B 1 38 ILE 38 183 183 ILE ILE B . n B 1 39 GLY 39 184 184 GLY GLY B . n B 1 40 ARG 40 185 185 ARG ARG B . n B 1 41 ARG 41 186 186 ARG ARG B . n B 1 42 LEU 42 187 187 LEU LEU B . n B 1 43 THR 43 188 188 THR THR B . n B 1 44 THR 44 189 189 THR THR B . n B 1 45 SER 45 190 190 SER SER B . n # _cell.entry_id 2J5D _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2J5D _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _exptl.entry_id 2J5D _exptl.method 'SOLUTION NMR' _exptl.crystals_number ? # _database_PDB_matrix.entry_id 2J5D _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2J5D _struct.title 'NMR structure of BNIP3 transmembrane domain in lipid bicelles' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2J5D _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'MEMBRANE PROTEIN, MITOCHONDRION, TRANSMEMBRANE, TRANSMEMBRANE DOMAIN, BCL-2, BNIP3, MEMBRANE, HOMODIMER, APOPTOSIS' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BNIP3_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession Q12983 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2J5D A 1 ? 45 ? Q12983 146 ? 190 ? 146 190 2 1 2J5D B 1 ? 45 ? Q12983 146 ? 190 ? 146 190 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 13 ? THR A 44 ? SER A 158 THR A 189 1 ? 32 HELX_P HELX_P2 2 GLU B 15 ? PHE B 20 ? GLU B 160 PHE B 165 1 ? 6 HELX_P HELX_P3 3 PHE B 20 ? LEU B 42 ? PHE B 165 LEU B 187 1 ? 23 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HG B SER 158 ? ? OE2 B GLU 160 ? ? 1.54 2 2 O A LEU 169 ? ? HG A SER 172 ? ? 1.57 3 3 O B LEU 169 ? ? HG B SER 172 ? ? 1.56 4 4 HG B SER 158 ? ? OE2 B GLU 160 ? ? 1.59 5 4 HG A SER 158 ? ? OE1 A GLU 160 ? ? 1.59 6 5 HG B SER 149 ? ? O B LYS 152 ? ? 1.57 7 11 O A ARG 186 ? ? HG A SER 190 ? ? 1.58 8 12 HG A SER 158 ? ? OE1 A GLU 160 ? ? 1.59 9 13 HG A SER 158 ? ? OE2 A GLU 160 ? ? 1.57 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 2 NE A ARG 146 ? ? CZ A ARG 146 ? ? NH1 A ARG 146 ? ? 123.45 120.30 3.15 0.50 N 2 2 NE A ARG 185 ? ? CZ A ARG 185 ? ? NH1 A ARG 185 ? ? 123.77 120.30 3.47 0.50 N 3 3 CB B TYR 182 ? ? CG B TYR 182 ? ? CD2 B TYR 182 ? ? 116.36 121.00 -4.64 0.60 N 4 3 NE B ARG 186 ? ? CZ B ARG 186 ? ? NH1 B ARG 186 ? ? 124.58 120.30 4.28 0.50 N 5 3 NE B ARG 186 ? ? CZ B ARG 186 ? ? NH2 B ARG 186 ? ? 116.58 120.30 -3.72 0.50 N 6 4 CB B PHE 165 ? ? CG B PHE 165 ? ? CD2 B PHE 165 ? ? 116.32 120.80 -4.48 0.70 N 7 4 NE B ARG 186 ? ? CZ B ARG 186 ? ? NH1 B ARG 186 ? ? 123.77 120.30 3.47 0.50 N 8 5 NE A ARG 146 ? ? CZ A ARG 146 ? ? NH1 A ARG 146 ? ? 123.97 120.30 3.67 0.50 N 9 5 CB A PHE 165 ? ? CG A PHE 165 ? ? CD2 A PHE 165 ? ? 116.53 120.80 -4.27 0.70 N 10 5 NE B ARG 146 ? ? CZ B ARG 146 ? ? NH1 B ARG 146 ? ? 123.78 120.30 3.48 0.50 N 11 5 CB B TYR 182 ? ? CG B TYR 182 ? ? CD2 B TYR 182 ? ? 117.13 121.00 -3.87 0.60 N 12 6 NE B ARG 186 ? ? CZ B ARG 186 ? ? NH1 B ARG 186 ? ? 123.81 120.30 3.51 0.50 N 13 7 CB B PHE 161 ? ? CG B PHE 161 ? ? CD2 B PHE 161 ? ? 115.07 120.80 -5.73 0.70 N 14 8 NE A ARG 185 ? ? CZ A ARG 185 ? ? NH1 A ARG 185 ? ? 124.66 120.30 4.36 0.50 N 15 9 CB A PHE 161 ? ? CG A PHE 161 ? ? CD2 A PHE 161 ? ? 116.45 120.80 -4.35 0.70 N 16 9 CB B PHE 157 ? ? CG B PHE 157 ? ? CD2 B PHE 157 ? ? 116.39 120.80 -4.41 0.70 N 17 10 NE B ARG 186 ? ? CZ B ARG 186 ? ? NH1 B ARG 186 ? ? 123.47 120.30 3.17 0.50 N 18 11 NE B ARG 185 ? ? CZ B ARG 185 ? ? NH1 B ARG 185 ? ? 123.30 120.30 3.00 0.50 N 19 12 NE B ARG 186 ? ? CZ B ARG 186 ? ? NH1 B ARG 186 ? ? 123.63 120.30 3.33 0.50 N 20 12 NE B ARG 186 ? ? CZ B ARG 186 ? ? NH2 B ARG 186 ? ? 117.28 120.30 -3.02 0.50 N 21 13 CB A PHE 157 ? ? CG A PHE 157 ? ? CD2 A PHE 157 ? ? 116.15 120.80 -4.65 0.70 N 22 13 CB A PHE 161 ? ? CG A PHE 161 ? ? CD2 A PHE 161 ? ? 116.53 120.80 -4.27 0.70 N 23 13 CB B TYR 182 ? ? CG B TYR 182 ? ? CD2 B TYR 182 ? ? 116.55 121.00 -4.45 0.60 N 24 14 NE A ARG 146 ? ? CZ A ARG 146 ? ? NH1 A ARG 146 ? ? 124.28 120.30 3.98 0.50 N 25 14 NE A ARG 146 ? ? CZ A ARG 146 ? ? NH2 A ARG 146 ? ? 117.04 120.30 -3.26 0.50 N 26 14 CB A PHE 157 ? ? CG A PHE 157 ? ? CD2 A PHE 157 ? ? 115.88 120.80 -4.92 0.70 N 27 14 CB A PHE 161 ? ? CG A PHE 161 ? ? CD2 A PHE 161 ? ? 116.58 120.80 -4.22 0.70 N 28 14 NE A ARG 186 ? ? CZ A ARG 186 ? ? NH2 A ARG 186 ? ? 117.26 120.30 -3.04 0.50 N 29 14 NE B ARG 185 ? ? CZ B ARG 185 ? ? NH1 B ARG 185 ? ? 124.57 120.30 4.27 0.50 N 30 15 NE A ARG 186 ? ? CZ A ARG 186 ? ? NH2 A ARG 186 ? ? 117.25 120.30 -3.05 0.50 N 31 15 NE B ARG 186 ? ? CZ B ARG 186 ? ? NH1 B ARG 186 ? ? 124.52 120.30 4.22 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 MET A 151 ? ? -64.08 96.23 2 1 LYS A 153 ? ? -104.17 -69.63 3 1 SER B 149 ? ? 177.08 149.18 4 1 LEU B 162 ? ? -80.70 31.73 5 1 LYS B 163 ? ? -127.09 -72.58 6 1 THR B 188 ? ? -117.05 -79.98 7 2 SER B 149 ? ? -56.83 109.70 8 2 ILE B 156 ? ? -36.84 139.57 9 3 MET B 151 ? ? 65.01 -64.65 10 3 LYS B 153 ? ? 46.84 27.38 11 3 SER B 158 ? ? -60.39 93.40 12 3 THR B 188 ? ? -84.35 -73.00 13 4 LYS A 153 ? ? 44.57 85.64 14 4 PHE A 157 ? ? -64.17 -71.44 15 4 SER B 149 ? ? 63.43 116.98 16 4 VAL B 150 ? ? 70.93 135.69 17 4 SER B 158 ? ? 172.28 141.53 18 5 SER A 149 ? ? -114.76 54.98 19 5 THR A 189 ? ? -109.33 53.88 20 5 SER B 149 ? ? 175.59 140.94 21 5 MET B 151 ? ? 59.83 -47.79 22 5 PHE B 161 ? ? -95.77 48.70 23 5 LYS B 163 ? ? -148.22 -39.97 24 5 PHE B 165 ? ? -51.43 -70.18 25 5 THR B 189 ? ? -106.04 70.21 26 6 VAL A 150 ? ? 36.95 50.24 27 6 SER A 158 ? ? -16.20 125.07 28 6 ASN B 147 ? ? -130.52 -49.80 29 6 LEU B 187 ? ? 6.47 -73.09 30 6 THR B 189 ? ? -90.52 58.40 31 7 ASN A 147 ? ? 21.40 78.41 32 7 MET A 151 ? ? -15.37 99.11 33 7 ILE A 156 ? ? -134.88 -148.95 34 7 THR A 189 ? ? -96.84 52.96 35 7 PHE B 165 ? ? -36.40 -71.79 36 7 ARG B 185 ? ? -96.55 -81.29 37 7 THR B 189 ? ? -79.01 26.71 38 8 PRO A 167 ? ? -51.96 -71.31 39 8 LYS B 152 ? ? -101.10 68.17 40 9 THR A 188 ? ? -95.98 -66.15 41 9 THR A 189 ? ? -106.23 67.46 42 9 ASN B 147 ? ? -135.37 -69.22 43 9 LYS B 152 ? ? -39.96 134.62 44 9 LEU B 169 ? ? -53.95 -71.08 45 10 THR A 148 ? ? -127.35 -66.05 46 10 LYS A 152 ? ? 64.25 97.30 47 10 THR A 189 ? ? -104.07 -74.58 48 10 SER B 158 ? ? 64.66 129.64 49 10 THR B 188 ? ? -101.47 -60.63 50 11 PHE A 157 ? ? -98.29 -72.07 51 11 ALA A 159 ? ? 35.99 50.35 52 11 GLU A 160 ? ? 66.75 -55.66 53 11 VAL A 164 ? ? -97.13 43.10 54 11 PHE A 165 ? ? -151.47 -68.20 55 11 ASN B 147 ? ? 74.76 -64.97 56 11 LYS B 152 ? ? 67.14 -64.56 57 11 LYS B 153 ? ? -65.97 94.37 58 12 ILE A 156 ? ? -110.93 -167.43 59 12 THR A 189 ? ? -67.11 68.76 60 12 MET B 151 ? ? -19.77 -64.43 61 13 THR A 148 ? ? -52.00 105.75 62 13 VAL A 150 ? ? -108.88 -77.80 63 13 PHE A 157 ? ? -66.96 -77.33 64 13 ILE B 156 ? ? -21.24 98.28 65 13 PHE B 157 ? ? 71.94 -46.28 66 13 SER B 158 ? ? -161.74 113.23 67 14 SER A 149 ? ? -93.42 -70.28 68 14 VAL A 150 ? ? 36.58 103.84 69 14 SER A 158 ? ? -174.85 119.34 70 14 ALA A 159 ? ? -124.89 -77.99 71 14 THR A 189 ? ? 20.40 89.94 72 14 ASN B 147 ? ? 7.91 75.73 73 14 LYS B 152 ? ? 34.60 86.35 74 14 THR B 188 ? ? -97.22 -75.17 75 15 THR A 188 ? ? -87.77 40.45 76 15 ASN B 147 ? ? 41.83 87.11 77 15 SER B 158 ? ? -173.53 119.95 78 16 SER A 158 ? ? 18.77 109.59 79 16 SER B 149 ? ? 65.25 117.38 80 16 THR B 188 ? ? -96.54 -75.22 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 TYR A 182 ? ? 0.075 'SIDE CHAIN' 2 1 ARG A 185 ? ? 0.075 'SIDE CHAIN' 3 1 TYR B 182 ? ? 0.068 'SIDE CHAIN' 4 2 TYR A 182 ? ? 0.088 'SIDE CHAIN' 5 3 PHE A 161 ? ? 0.104 'SIDE CHAIN' 6 3 PHE B 161 ? ? 0.083 'SIDE CHAIN' 7 3 TYR B 182 ? ? 0.172 'SIDE CHAIN' 8 4 PHE A 157 ? ? 0.126 'SIDE CHAIN' 9 4 PHE A 165 ? ? 0.111 'SIDE CHAIN' 10 4 TYR A 182 ? ? 0.094 'SIDE CHAIN' 11 4 ARG A 185 ? ? 0.110 'SIDE CHAIN' 12 4 TYR B 182 ? ? 0.071 'SIDE CHAIN' 13 4 ARG B 186 ? ? 0.090 'SIDE CHAIN' 14 5 PHE A 165 ? ? 0.100 'SIDE CHAIN' 15 5 TYR A 182 ? ? 0.093 'SIDE CHAIN' 16 5 ARG A 185 ? ? 0.083 'SIDE CHAIN' 17 5 PHE B 161 ? ? 0.078 'SIDE CHAIN' 18 5 TYR B 182 ? ? 0.067 'SIDE CHAIN' 19 5 ARG B 185 ? ? 0.089 'SIDE CHAIN' 20 6 PHE B 161 ? ? 0.075 'SIDE CHAIN' 21 6 TYR B 182 ? ? 0.085 'SIDE CHAIN' 22 7 PHE A 161 ? ? 0.136 'SIDE CHAIN' 23 7 TYR A 182 ? ? 0.071 'SIDE CHAIN' 24 7 PHE B 161 ? ? 0.093 'SIDE CHAIN' 25 7 TYR B 182 ? ? 0.068 'SIDE CHAIN' 26 8 TYR A 182 ? ? 0.167 'SIDE CHAIN' 27 8 ARG B 146 ? ? 0.074 'SIDE CHAIN' 28 9 PHE A 157 ? ? 0.086 'SIDE CHAIN' 29 9 PHE A 161 ? ? 0.085 'SIDE CHAIN' 30 9 TYR A 182 ? ? 0.078 'SIDE CHAIN' 31 9 TYR B 182 ? ? 0.091 'SIDE CHAIN' 32 10 ARG A 146 ? ? 0.084 'SIDE CHAIN' 33 10 TYR A 182 ? ? 0.121 'SIDE CHAIN' 34 10 PHE B 165 ? ? 0.101 'SIDE CHAIN' 35 10 TYR B 182 ? ? 0.087 'SIDE CHAIN' 36 11 PHE B 161 ? ? 0.113 'SIDE CHAIN' 37 11 TYR B 182 ? ? 0.153 'SIDE CHAIN' 38 12 PHE A 165 ? ? 0.105 'SIDE CHAIN' 39 12 PHE B 157 ? ? 0.087 'SIDE CHAIN' 40 12 PHE B 165 ? ? 0.128 'SIDE CHAIN' 41 12 TYR B 182 ? ? 0.107 'SIDE CHAIN' 42 13 PHE A 157 ? ? 0.133 'SIDE CHAIN' 43 13 PHE A 161 ? ? 0.098 'SIDE CHAIN' 44 13 TYR A 182 ? ? 0.066 'SIDE CHAIN' 45 13 ARG A 185 ? ? 0.071 'SIDE CHAIN' 46 13 TYR B 182 ? ? 0.210 'SIDE CHAIN' 47 13 ARG B 185 ? ? 0.082 'SIDE CHAIN' 48 14 PHE A 157 ? ? 0.114 'SIDE CHAIN' 49 14 ARG A 185 ? ? 0.119 'SIDE CHAIN' 50 14 TYR B 182 ? ? 0.076 'SIDE CHAIN' 51 15 PHE A 161 ? ? 0.075 'SIDE CHAIN' 52 15 PHE B 165 ? ? 0.117 'SIDE CHAIN' 53 15 TYR B 182 ? ? 0.165 'SIDE CHAIN' 54 15 ARG B 185 ? ? 0.072 'SIDE CHAIN' 55 16 PHE A 161 ? ? 0.088 'SIDE CHAIN' 56 16 TYR A 182 ? ? 0.141 'SIDE CHAIN' 57 16 TYR B 182 ? ? 0.171 'SIDE CHAIN' 58 16 ARG B 186 ? ? 0.096 'SIDE CHAIN' # loop_ _pdbx_validate_main_chain_plane.id _pdbx_validate_main_chain_plane.PDB_model_num _pdbx_validate_main_chain_plane.auth_comp_id _pdbx_validate_main_chain_plane.auth_asym_id _pdbx_validate_main_chain_plane.auth_seq_id _pdbx_validate_main_chain_plane.PDB_ins_code _pdbx_validate_main_chain_plane.label_alt_id _pdbx_validate_main_chain_plane.improper_torsion_angle 1 1 THR B 148 ? ? 11.00 2 1 LEU B 169 ? ? -10.32 3 3 LEU A 169 ? ? -10.04 4 4 PHE A 161 ? ? -10.07 5 5 LEU B 169 ? ? -10.45 6 6 PHE A 157 ? ? 11.12 7 7 VAL A 150 ? ? 10.29 8 7 LEU B 169 ? ? -10.76 9 7 THR B 188 ? ? -10.40 10 8 LEU B 169 ? ? -11.91 11 10 LEU B 169 ? ? -10.16 12 13 THR A 148 ? ? 10.81 13 15 LEU A 187 ? ? -11.22 # _pdbx_entry_details.entry_id 2J5D _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;WE STUDIED BNIP3 FRAGMENT ARG146-SER190 WHICH CONTAINS THE TRANSMEMBRANE SEGMENT WITH ADJACENT REGION ; _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_nmr_ensemble.entry_id 2J5D _pdbx_nmr_ensemble.conformers_calculated_total_number 200 _pdbx_nmr_ensemble.conformers_submitted_total_number 16 _pdbx_nmr_ensemble.conformer_selection_criteria 'THE BEST TARGET FUNCTION' # _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.contents '95% H2O/ 5% D2O' _pdbx_nmr_sample_details.solvent_system ? _pdbx_nmr_sample_details.label ? _pdbx_nmr_sample_details.type ? _pdbx_nmr_sample_details.details ? # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.temperature 313.0 _pdbx_nmr_exptl_sample_conditions.pressure_units atm _pdbx_nmr_exptl_sample_conditions.pressure 1.0 _pdbx_nmr_exptl_sample_conditions.pH 5.1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 20 _pdbx_nmr_exptl_sample_conditions.ionic_strength_units mM _pdbx_nmr_exptl_sample_conditions.pH_units pH _pdbx_nmr_exptl_sample_conditions.temperature_units K _pdbx_nmr_exptl_sample_conditions.label ? # loop_ _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.type _pdbx_nmr_exptl.solution_id 1 1 15N-HSQC 1 2 1 '3D-15N-EDITED- NOESY' 1 3 1 3D-15N-EDITED-TOCSY 1 4 1 13C-HSQC 1 5 1 '3D-13C-EDITED- NOESY' 1 6 1 '3D HCCH-TOCSY' 1 7 1 '2D- NOESY' 1 8 1 2D-TOCSY 1 9 1 2D-ROESY 1 10 1 HNCA 1 11 1 HNCOCA 1 12 1 HNCACB 1 13 1 CBCACONH 1 14 1 HBHACONH 1 15 1 '2D-15N- 13C-F1-FILT.-F3-SEPAR.- NOESY-HSQC' 1 16 1 '3D-13C-F1-FILT. -F3-SEPAR.-NOESY-HSQC' 1 # _pdbx_nmr_details.entry_id 2J5D _pdbx_nmr_details.text 'THE FIRST 12 AND THE LAST 4 STRUCTERES DIFFER IN HIS173 TAUTOMERIC FORM WITH PROTONATED NE OR ND, RESPECTIVELY.' # _pdbx_nmr_refine.entry_id 2J5D _pdbx_nmr_refine.method TAD _pdbx_nmr_refine.details ;NMR-DERIVED STRUCTURES OF BNIP3 TM DIMERIC WERE RELAXATED BY MOLECULAR DYNAMICS IN EXPLICIT LIPID DMPC BILAYER USING NMR CONSTRAINTS THERE ARE SLOW CONFORMATIONAL EXCHANGE IN HYDROGEN BOND NET OF (SER172, HIS173)2 CLUSTER ON THE DIMERIZATION INTERFACE. ; _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.authors _pdbx_nmr_software.ordinal refinement GROMACS ? LINDAHL 1 'structure solution' CYANA ? ? 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 GLU N N N N 58 GLU CA C N S 59 GLU C C N N 60 GLU O O N N 61 GLU CB C N N 62 GLU CG C N N 63 GLU CD C N N 64 GLU OE1 O N N 65 GLU OE2 O N N 66 GLU OXT O N N 67 GLU H H N N 68 GLU H2 H N N 69 GLU HA H N N 70 GLU HB2 H N N 71 GLU HB3 H N N 72 GLU HG2 H N N 73 GLU HG3 H N N 74 GLU HE2 H N N 75 GLU HXT H N N 76 GLY N N N N 77 GLY CA C N N 78 GLY C C N N 79 GLY O O N N 80 GLY OXT O N N 81 GLY H H N N 82 GLY H2 H N N 83 GLY HA2 H N N 84 GLY HA3 H N N 85 GLY HXT H N N 86 HIS N N N N 87 HIS CA C N S 88 HIS C C N N 89 HIS O O N N 90 HIS CB C N N 91 HIS CG C Y N 92 HIS ND1 N Y N 93 HIS CD2 C Y N 94 HIS CE1 C Y N 95 HIS NE2 N Y N 96 HIS OXT O N N 97 HIS H H N N 98 HIS H2 H N N 99 HIS HA H N N 100 HIS HB2 H N N 101 HIS HB3 H N N 102 HIS HD1 H N N 103 HIS HD2 H N N 104 HIS HE1 H N N 105 HIS HE2 H N N 106 HIS HXT H N N 107 ILE N N N N 108 ILE CA C N S 109 ILE C C N N 110 ILE O O N N 111 ILE CB C N S 112 ILE CG1 C N N 113 ILE CG2 C N N 114 ILE CD1 C N N 115 ILE OXT O N N 116 ILE H H N N 117 ILE H2 H N N 118 ILE HA H N N 119 ILE HB H N N 120 ILE HG12 H N N 121 ILE HG13 H N N 122 ILE HG21 H N N 123 ILE HG22 H N N 124 ILE HG23 H N N 125 ILE HD11 H N N 126 ILE HD12 H N N 127 ILE HD13 H N N 128 ILE HXT H N N 129 LEU N N N N 130 LEU CA C N S 131 LEU C C N N 132 LEU O O N N 133 LEU CB C N N 134 LEU CG C N N 135 LEU CD1 C N N 136 LEU CD2 C N N 137 LEU OXT O N N 138 LEU H H N N 139 LEU H2 H N N 140 LEU HA H N N 141 LEU HB2 H N N 142 LEU HB3 H N N 143 LEU HG H N N 144 LEU HD11 H N N 145 LEU HD12 H N N 146 LEU HD13 H N N 147 LEU HD21 H N N 148 LEU HD22 H N N 149 LEU HD23 H N N 150 LEU HXT H N N 151 LYS N N N N 152 LYS CA C N S 153 LYS C C N N 154 LYS O O N N 155 LYS CB C N N 156 LYS CG C N N 157 LYS CD C N N 158 LYS CE C N N 159 LYS NZ N N N 160 LYS OXT O N N 161 LYS H H N N 162 LYS H2 H N N 163 LYS HA H N N 164 LYS HB2 H N N 165 LYS HB3 H N N 166 LYS HG2 H N N 167 LYS HG3 H N N 168 LYS HD2 H N N 169 LYS HD3 H N N 170 LYS HE2 H N N 171 LYS HE3 H N N 172 LYS HZ1 H N N 173 LYS HZ2 H N N 174 LYS HZ3 H N N 175 LYS HXT H N N 176 MET N N N N 177 MET CA C N S 178 MET C C N N 179 MET O O N N 180 MET CB C N N 181 MET CG C N N 182 MET SD S N N 183 MET CE C N N 184 MET OXT O N N 185 MET H H N N 186 MET H2 H N N 187 MET HA H N N 188 MET HB2 H N N 189 MET HB3 H N N 190 MET HG2 H N N 191 MET HG3 H N N 192 MET HE1 H N N 193 MET HE2 H N N 194 MET HE3 H N N 195 MET HXT H N N 196 PHE N N N N 197 PHE CA C N S 198 PHE C C N N 199 PHE O O N N 200 PHE CB C N N 201 PHE CG C Y N 202 PHE CD1 C Y N 203 PHE CD2 C Y N 204 PHE CE1 C Y N 205 PHE CE2 C Y N 206 PHE CZ C Y N 207 PHE OXT O N N 208 PHE H H N N 209 PHE H2 H N N 210 PHE HA H N N 211 PHE HB2 H N N 212 PHE HB3 H N N 213 PHE HD1 H N N 214 PHE HD2 H N N 215 PHE HE1 H N N 216 PHE HE2 H N N 217 PHE HZ H N N 218 PHE HXT H N N 219 PRO N N N N 220 PRO CA C N S 221 PRO C C N N 222 PRO O O N N 223 PRO CB C N N 224 PRO CG C N N 225 PRO CD C N N 226 PRO OXT O N N 227 PRO H H N N 228 PRO HA H N N 229 PRO HB2 H N N 230 PRO HB3 H N N 231 PRO HG2 H N N 232 PRO HG3 H N N 233 PRO HD2 H N N 234 PRO HD3 H N N 235 PRO HXT H N N 236 SER N N N N 237 SER CA C N S 238 SER C C N N 239 SER O O N N 240 SER CB C N N 241 SER OG O N N 242 SER OXT O N N 243 SER H H N N 244 SER H2 H N N 245 SER HA H N N 246 SER HB2 H N N 247 SER HB3 H N N 248 SER HG H N N 249 SER HXT H N N 250 THR N N N N 251 THR CA C N S 252 THR C C N N 253 THR O O N N 254 THR CB C N R 255 THR OG1 O N N 256 THR CG2 C N N 257 THR OXT O N N 258 THR H H N N 259 THR H2 H N N 260 THR HA H N N 261 THR HB H N N 262 THR HG1 H N N 263 THR HG21 H N N 264 THR HG22 H N N 265 THR HG23 H N N 266 THR HXT H N N 267 TYR N N N N 268 TYR CA C N S 269 TYR C C N N 270 TYR O O N N 271 TYR CB C N N 272 TYR CG C Y N 273 TYR CD1 C Y N 274 TYR CD2 C Y N 275 TYR CE1 C Y N 276 TYR CE2 C Y N 277 TYR CZ C Y N 278 TYR OH O N N 279 TYR OXT O N N 280 TYR H H N N 281 TYR H2 H N N 282 TYR HA H N N 283 TYR HB2 H N N 284 TYR HB3 H N N 285 TYR HD1 H N N 286 TYR HD2 H N N 287 TYR HE1 H N N 288 TYR HE2 H N N 289 TYR HH H N N 290 TYR HXT H N N 291 VAL N N N N 292 VAL CA C N S 293 VAL C C N N 294 VAL O O N N 295 VAL CB C N N 296 VAL CG1 C N N 297 VAL CG2 C N N 298 VAL OXT O N N 299 VAL H H N N 300 VAL H2 H N N 301 VAL HA H N N 302 VAL HB H N N 303 VAL HG11 H N N 304 VAL HG12 H N N 305 VAL HG13 H N N 306 VAL HG21 H N N 307 VAL HG22 H N N 308 VAL HG23 H N N 309 VAL HXT H N N 310 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 GLU N CA sing N N 55 GLU N H sing N N 56 GLU N H2 sing N N 57 GLU CA C sing N N 58 GLU CA CB sing N N 59 GLU CA HA sing N N 60 GLU C O doub N N 61 GLU C OXT sing N N 62 GLU CB CG sing N N 63 GLU CB HB2 sing N N 64 GLU CB HB3 sing N N 65 GLU CG CD sing N N 66 GLU CG HG2 sing N N 67 GLU CG HG3 sing N N 68 GLU CD OE1 doub N N 69 GLU CD OE2 sing N N 70 GLU OE2 HE2 sing N N 71 GLU OXT HXT sing N N 72 GLY N CA sing N N 73 GLY N H sing N N 74 GLY N H2 sing N N 75 GLY CA C sing N N 76 GLY CA HA2 sing N N 77 GLY CA HA3 sing N N 78 GLY C O doub N N 79 GLY C OXT sing N N 80 GLY OXT HXT sing N N 81 HIS N CA sing N N 82 HIS N H sing N N 83 HIS N H2 sing N N 84 HIS CA C sing N N 85 HIS CA CB sing N N 86 HIS CA HA sing N N 87 HIS C O doub N N 88 HIS C OXT sing N N 89 HIS CB CG sing N N 90 HIS CB HB2 sing N N 91 HIS CB HB3 sing N N 92 HIS CG ND1 sing Y N 93 HIS CG CD2 doub Y N 94 HIS ND1 CE1 doub Y N 95 HIS ND1 HD1 sing N N 96 HIS CD2 NE2 sing Y N 97 HIS CD2 HD2 sing N N 98 HIS CE1 NE2 sing Y N 99 HIS CE1 HE1 sing N N 100 HIS NE2 HE2 sing N N 101 HIS OXT HXT sing N N 102 ILE N CA sing N N 103 ILE N H sing N N 104 ILE N H2 sing N N 105 ILE CA C sing N N 106 ILE CA CB sing N N 107 ILE CA HA sing N N 108 ILE C O doub N N 109 ILE C OXT sing N N 110 ILE CB CG1 sing N N 111 ILE CB CG2 sing N N 112 ILE CB HB sing N N 113 ILE CG1 CD1 sing N N 114 ILE CG1 HG12 sing N N 115 ILE CG1 HG13 sing N N 116 ILE CG2 HG21 sing N N 117 ILE CG2 HG22 sing N N 118 ILE CG2 HG23 sing N N 119 ILE CD1 HD11 sing N N 120 ILE CD1 HD12 sing N N 121 ILE CD1 HD13 sing N N 122 ILE OXT HXT sing N N 123 LEU N CA sing N N 124 LEU N H sing N N 125 LEU N H2 sing N N 126 LEU CA C sing N N 127 LEU CA CB sing N N 128 LEU CA HA sing N N 129 LEU C O doub N N 130 LEU C OXT sing N N 131 LEU CB CG sing N N 132 LEU CB HB2 sing N N 133 LEU CB HB3 sing N N 134 LEU CG CD1 sing N N 135 LEU CG CD2 sing N N 136 LEU CG HG sing N N 137 LEU CD1 HD11 sing N N 138 LEU CD1 HD12 sing N N 139 LEU CD1 HD13 sing N N 140 LEU CD2 HD21 sing N N 141 LEU CD2 HD22 sing N N 142 LEU CD2 HD23 sing N N 143 LEU OXT HXT sing N N 144 LYS N CA sing N N 145 LYS N H sing N N 146 LYS N H2 sing N N 147 LYS CA C sing N N 148 LYS CA CB sing N N 149 LYS CA HA sing N N 150 LYS C O doub N N 151 LYS C OXT sing N N 152 LYS CB CG sing N N 153 LYS CB HB2 sing N N 154 LYS CB HB3 sing N N 155 LYS CG CD sing N N 156 LYS CG HG2 sing N N 157 LYS CG HG3 sing N N 158 LYS CD CE sing N N 159 LYS CD HD2 sing N N 160 LYS CD HD3 sing N N 161 LYS CE NZ sing N N 162 LYS CE HE2 sing N N 163 LYS CE HE3 sing N N 164 LYS NZ HZ1 sing N N 165 LYS NZ HZ2 sing N N 166 LYS NZ HZ3 sing N N 167 LYS OXT HXT sing N N 168 MET N CA sing N N 169 MET N H sing N N 170 MET N H2 sing N N 171 MET CA C sing N N 172 MET CA CB sing N N 173 MET CA HA sing N N 174 MET C O doub N N 175 MET C OXT sing N N 176 MET CB CG sing N N 177 MET CB HB2 sing N N 178 MET CB HB3 sing N N 179 MET CG SD sing N N 180 MET CG HG2 sing N N 181 MET CG HG3 sing N N 182 MET SD CE sing N N 183 MET CE HE1 sing N N 184 MET CE HE2 sing N N 185 MET CE HE3 sing N N 186 MET OXT HXT sing N N 187 PHE N CA sing N N 188 PHE N H sing N N 189 PHE N H2 sing N N 190 PHE CA C sing N N 191 PHE CA CB sing N N 192 PHE CA HA sing N N 193 PHE C O doub N N 194 PHE C OXT sing N N 195 PHE CB CG sing N N 196 PHE CB HB2 sing N N 197 PHE CB HB3 sing N N 198 PHE CG CD1 doub Y N 199 PHE CG CD2 sing Y N 200 PHE CD1 CE1 sing Y N 201 PHE CD1 HD1 sing N N 202 PHE CD2 CE2 doub Y N 203 PHE CD2 HD2 sing N N 204 PHE CE1 CZ doub Y N 205 PHE CE1 HE1 sing N N 206 PHE CE2 CZ sing Y N 207 PHE CE2 HE2 sing N N 208 PHE CZ HZ sing N N 209 PHE OXT HXT sing N N 210 PRO N CA sing N N 211 PRO N CD sing N N 212 PRO N H sing N N 213 PRO CA C sing N N 214 PRO CA CB sing N N 215 PRO CA HA sing N N 216 PRO C O doub N N 217 PRO C OXT sing N N 218 PRO CB CG sing N N 219 PRO CB HB2 sing N N 220 PRO CB HB3 sing N N 221 PRO CG CD sing N N 222 PRO CG HG2 sing N N 223 PRO CG HG3 sing N N 224 PRO CD HD2 sing N N 225 PRO CD HD3 sing N N 226 PRO OXT HXT sing N N 227 SER N CA sing N N 228 SER N H sing N N 229 SER N H2 sing N N 230 SER CA C sing N N 231 SER CA CB sing N N 232 SER CA HA sing N N 233 SER C O doub N N 234 SER C OXT sing N N 235 SER CB OG sing N N 236 SER CB HB2 sing N N 237 SER CB HB3 sing N N 238 SER OG HG sing N N 239 SER OXT HXT sing N N 240 THR N CA sing N N 241 THR N H sing N N 242 THR N H2 sing N N 243 THR CA C sing N N 244 THR CA CB sing N N 245 THR CA HA sing N N 246 THR C O doub N N 247 THR C OXT sing N N 248 THR CB OG1 sing N N 249 THR CB CG2 sing N N 250 THR CB HB sing N N 251 THR OG1 HG1 sing N N 252 THR CG2 HG21 sing N N 253 THR CG2 HG22 sing N N 254 THR CG2 HG23 sing N N 255 THR OXT HXT sing N N 256 TYR N CA sing N N 257 TYR N H sing N N 258 TYR N H2 sing N N 259 TYR CA C sing N N 260 TYR CA CB sing N N 261 TYR CA HA sing N N 262 TYR C O doub N N 263 TYR C OXT sing N N 264 TYR CB CG sing N N 265 TYR CB HB2 sing N N 266 TYR CB HB3 sing N N 267 TYR CG CD1 doub Y N 268 TYR CG CD2 sing Y N 269 TYR CD1 CE1 sing Y N 270 TYR CD1 HD1 sing N N 271 TYR CD2 CE2 doub Y N 272 TYR CD2 HD2 sing N N 273 TYR CE1 CZ doub Y N 274 TYR CE1 HE1 sing N N 275 TYR CE2 CZ sing Y N 276 TYR CE2 HE2 sing N N 277 TYR CZ OH sing N N 278 TYR OH HH sing N N 279 TYR OXT HXT sing N N 280 VAL N CA sing N N 281 VAL N H sing N N 282 VAL N H2 sing N N 283 VAL CA C sing N N 284 VAL CA CB sing N N 285 VAL CA HA sing N N 286 VAL C O doub N N 287 VAL C OXT sing N N 288 VAL CB CG1 sing N N 289 VAL CB CG2 sing N N 290 VAL CB HB sing N N 291 VAL CG1 HG11 sing N N 292 VAL CG1 HG12 sing N N 293 VAL CG1 HG13 sing N N 294 VAL CG2 HG21 sing N N 295 VAL CG2 HG22 sing N N 296 VAL CG2 HG23 sing N N 297 VAL OXT HXT sing N N 298 # _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.type ? # _atom_sites.entry_id 2J5D _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_