HEADER HYDROLASE 05-OCT-06 2J6Y TITLE STRUCTURAL AND FUNCTIONAL CHARACTERISATION OF PARTNER SWITCHING TITLE 2 REGULATING THE ENVIRONMENTAL STRESS RESPONSE IN BACILLUS SUBTILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHOSPHOSERINE PHOSPHATASE RSBU; COMPND 3 CHAIN: A, B, C, D, E; COMPND 4 FRAGMENT: RSBT BINDING DOMAIN, RESIDUES 1-111; COMPND 5 SYNONYM: SIGMA FACTOR SIGB REGULATION PROTEIN RSBU, N-RSBU; COMPND 6 EC: 3.1.3.3; COMPND 7 ENGINEERED: YES; COMPND 8 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS HYDROLASE, PARTNER SWITCHING, PROTEIN PHOSPHATASE, RSBT, RSBU, KEYWDS 2 STRESS, BACILLUS SUBTILIS EXPDTA X-RAY DIFFRACTION AUTHOR S.W.HARDWICK,J.PANE-FARRE,O.DELUMEAU,J.MARLES-WRIGHT,J.W.MURRAY, AUTHOR 2 M.HECKER,R.J.LEWIS REVDAT 6 13-DEC-23 2J6Y 1 REMARK REVDAT 5 28-MAR-18 2J6Y 1 SOURCE JRNL REVDAT 4 28-JUN-17 2J6Y 1 REMARK REVDAT 3 24-FEB-09 2J6Y 1 VERSN REVDAT 2 17-APR-07 2J6Y 1 JRNL REVDAT 1 13-FEB-07 2J6Y 0 JRNL AUTH S.W.HARDWICK,J.PANE-FARRE,O.DELUMEAU,J.MARLES-WRIGHT, JRNL AUTH 2 J.W.MURRAY,M.HECKER,R.J.LEWIS JRNL TITL STRUCTURAL AND FUNCTIONAL CHARACTERIZATION OF PARTNER JRNL TITL 2 SWITCHING REGULATING THE ENVIRONMENTAL STRESS RESPONSE IN JRNL TITL 3 BACILLUS SUBTILIS. JRNL REF J. BIOL. CHEM. V. 282 11562 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17303566 JRNL DOI 10.1074/JBC.M609733200 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 42.91 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.9 REMARK 3 NUMBER OF REFLECTIONS : 34179 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.186 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.253 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1788 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.85 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.90 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2429 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.18 REMARK 3 BIN R VALUE (WORKING SET) : 0.2490 REMARK 3 BIN FREE R VALUE SET COUNT : 125 REMARK 3 BIN FREE R VALUE : 0.3460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3518 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 348 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 19.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.157 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.161 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.102 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.286 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.950 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.906 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3577 ; 0.013 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4844 ; 1.757 ; 1.970 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 425 ; 5.752 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 173 ;28.136 ;23.526 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 656 ;15.534 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;14.929 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 539 ; 0.124 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2677 ; 0.005 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1945 ; 0.220 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2568 ; 0.313 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 294 ; 0.173 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 114 ; 0.232 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 32 ; 0.120 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2174 ; 1.353 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3446 ; 2.057 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1582 ; 3.370 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1391 ; 4.942 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2J6Y COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 05-OCT-06. REMARK 100 THE DEPOSITION ID IS D_1290030137. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-SEP-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.933 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 35972 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 48.110 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 96.1 REMARK 200 DATA REDUNDANCY : 2.200 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 5.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.85 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.95 REMARK 200 COMPLETENESS FOR SHELL (%) : 93.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.20 REMARK 200 R MERGE FOR SHELL (I) : 0.44000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: ARP/WARP REMARK 200 STARTING MODEL: PDB ENTRY 1W53 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 29.72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.75 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10 % PEG 20000, 100 MM MES PH 6.5, PH REMARK 280 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 50.07850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 23.91550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 50.07850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 23.91550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -23.55336 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 92.00087 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 24 TO LYS REMARK 400 ENGINEERED RESIDUE IN CHAIN B, GLU 24 TO LYS REMARK 400 ENGINEERED RESIDUE IN CHAIN C, GLU 24 TO LYS REMARK 400 ENGINEERED RESIDUE IN CHAIN D, GLU 24 TO LYS REMARK 400 ENGINEERED RESIDUE IN CHAIN E, GLU 24 TO LYS REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 86 REMARK 465 HIS A 87 REMARK 465 GLN A 88 REMARK 465 THR A 89 REMARK 465 LEU A 90 REMARK 465 ARG A 91 REMARK 465 GLY A 92 REMARK 465 ILE A 93 REMARK 465 GLN A 94 REMARK 465 GLN A 95 REMARK 465 GLU A 96 REMARK 465 ILE A 97 REMARK 465 LYS A 98 REMARK 465 SER A 99 REMARK 465 GLU A 100 REMARK 465 ILE A 101 REMARK 465 GLU A 102 REMARK 465 ILE A 103 REMARK 465 ALA A 104 REMARK 465 ALA A 105 REMARK 465 ASN A 106 REMARK 465 VAL A 107 REMARK 465 GLN A 108 REMARK 465 GLN A 109 REMARK 465 THR A 110 REMARK 465 LEU A 111 REMARK 465 MET B 1 REMARK 465 ASP B 2 REMARK 465 PHE B 3 REMARK 465 ARG B 4 REMARK 465 GLU B 86 REMARK 465 HIS B 87 REMARK 465 GLN B 88 REMARK 465 THR B 89 REMARK 465 LEU B 90 REMARK 465 ARG B 91 REMARK 465 GLY B 92 REMARK 465 ILE B 93 REMARK 465 GLN B 94 REMARK 465 GLN B 95 REMARK 465 GLU B 96 REMARK 465 ILE B 97 REMARK 465 LYS B 98 REMARK 465 SER B 99 REMARK 465 GLU B 100 REMARK 465 ILE B 101 REMARK 465 GLU B 102 REMARK 465 ILE B 103 REMARK 465 ALA B 104 REMARK 465 ALA B 105 REMARK 465 ASN B 106 REMARK 465 VAL B 107 REMARK 465 GLN B 108 REMARK 465 GLN B 109 REMARK 465 THR B 110 REMARK 465 LEU B 111 REMARK 465 MET C 1 REMARK 465 ASP C 2 REMARK 465 GLN C 88 REMARK 465 THR C 89 REMARK 465 LEU C 90 REMARK 465 ARG C 91 REMARK 465 GLY C 92 REMARK 465 ILE C 93 REMARK 465 GLN C 94 REMARK 465 GLN C 95 REMARK 465 GLU C 96 REMARK 465 ILE C 97 REMARK 465 LYS C 98 REMARK 465 SER C 99 REMARK 465 GLU C 100 REMARK 465 ILE C 101 REMARK 465 GLU C 102 REMARK 465 ILE C 103 REMARK 465 ALA C 104 REMARK 465 ALA C 105 REMARK 465 ASN C 106 REMARK 465 VAL C 107 REMARK 465 GLN C 108 REMARK 465 GLN C 109 REMARK 465 THR C 110 REMARK 465 LEU C 111 REMARK 465 MET D 1 REMARK 465 GLU D 86 REMARK 465 HIS D 87 REMARK 465 GLN D 88 REMARK 465 THR D 89 REMARK 465 LEU D 90 REMARK 465 ARG D 91 REMARK 465 GLY D 92 REMARK 465 ILE D 93 REMARK 465 GLN D 94 REMARK 465 GLN D 95 REMARK 465 GLU D 96 REMARK 465 ILE D 97 REMARK 465 LYS D 98 REMARK 465 SER D 99 REMARK 465 GLU D 100 REMARK 465 ILE D 101 REMARK 465 GLU D 102 REMARK 465 ILE D 103 REMARK 465 ALA D 104 REMARK 465 ALA D 105 REMARK 465 ASN D 106 REMARK 465 VAL D 107 REMARK 465 GLN D 108 REMARK 465 GLN D 109 REMARK 465 THR D 110 REMARK 465 LEU D 111 REMARK 465 MET E 1 REMARK 465 ALA E 83 REMARK 465 TYR E 84 REMARK 465 GLN E 85 REMARK 465 GLU E 86 REMARK 465 HIS E 87 REMARK 465 GLN E 88 REMARK 465 THR E 89 REMARK 465 LEU E 90 REMARK 465 ARG E 91 REMARK 465 GLY E 92 REMARK 465 ILE E 93 REMARK 465 GLN E 94 REMARK 465 GLN E 95 REMARK 465 GLU E 96 REMARK 465 ILE E 97 REMARK 465 LYS E 98 REMARK 465 SER E 99 REMARK 465 GLU E 100 REMARK 465 ILE E 101 REMARK 465 GLU E 102 REMARK 465 ILE E 103 REMARK 465 ALA E 104 REMARK 465 ALA E 105 REMARK 465 ASN E 106 REMARK 465 VAL E 107 REMARK 465 GLN E 108 REMARK 465 GLN E 109 REMARK 465 THR E 110 REMARK 465 LEU E 111 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 MET A 1 CG SD CE REMARK 480 GLN A 9 CD OE1 NE2 REMARK 480 GLN A 13 CD OE1 NE2 REMARK 480 LYS A 36 CD CE NZ REMARK 480 GLN B 9 CD OE1 NE2 REMARK 480 LYS B 36 CD CE NZ REMARK 480 TYR B 84 CG CD1 CD2 CE1 CE2 CZ OH REMARK 480 GLU C 5 CG CD OE1 OE2 REMARK 480 LYS C 32 CD CE NZ REMARK 480 LYS C 36 CD CE NZ REMARK 480 GLU C 39 CG CD OE1 OE2 REMARK 480 GLU C 86 CG CD OE1 OE2 REMARK 480 LYS D 32 CE NZ REMARK 480 LYS D 36 CE NZ REMARK 480 GLN D 85 CG CD OE1 NE2 REMARK 480 ARG E 4 CG CD NE CZ NH1 NH2 REMARK 480 GLN E 9 CD OE1 NE2 REMARK 480 LYS E 32 NZ REMARK 480 ARG E 35 CD NE CZ NH1 NH2 REMARK 480 LYS E 36 CG CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 NZ LYS A 36 O HOH A 2043 1.85 REMARK 500 O ALA A 83 OH TYR B 84 1.92 REMARK 500 NE2 GLN D 85 O HOH D 2081 2.03 REMARK 500 CD ARG B 17 O HOH B 2015 2.11 REMARK 500 OE1 GLU D 46 O HOH D 2055 2.14 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU D 8 CA GLU D 8 CB 0.285 REMARK 500 THR E 25 CB THR E 25 OG1 -0.136 REMARK 500 THR E 25 CB THR E 25 OG1 -0.357 REMARK 500 THR E 25 CB THR E 25 CG2 0.370 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP B 65 CB - CG - OD1 ANGL. DEV. = 5.6 DEGREES REMARK 500 ASP B 65 CB - CG - OD2 ANGL. DEV. = -5.8 DEGREES REMARK 500 TYR B 84 CB - CG - CD2 ANGL. DEV. = -5.6 DEGREES REMARK 500 TYR B 84 CB - CG - CD1 ANGL. DEV. = 5.5 DEGREES REMARK 500 ASP C 65 CB - CG - OD1 ANGL. DEV. = 6.2 DEGREES REMARK 500 THR E 25 OG1 - CB - CG2 ANGL. DEV. = 18.6 DEGREES REMARK 500 THR E 25 CA - CB - OG1 ANGL. DEV. = 18.5 DEGREES REMARK 500 THR E 25 CA - CB - CG2 ANGL. DEV. = -18.4 DEGREES REMARK 500 THR E 25 CA - CB - CG2 ANGL. DEV. = -15.0 DEGREES REMARK 500 SER E 26 CA - CB - OG ANGL. DEV. = 17.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 TYR B 84 GLN B 85 -146.61 REMARK 500 ASP D 2 PHE D 3 -148.03 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1W53 RELATED DB: PDB REMARK 900 KINASE RECRUITMENT DOMAIN OF THE STRESS PHOSPHATASE RSBU REMARK 900 RELATED ID: 2J6Z RELATED DB: PDB REMARK 900 STRUCTURAL AND FUNCTIONAL CHARACTERISATION OF PARTNER-SWITCHING REMARK 900 REGULATING THE ENVIRONMENTAL STRESS RESPONSE IN B. SUBTILIS REMARK 900 RELATED ID: 2J70 RELATED DB: PDB REMARK 900 STRUCTURAL AND FUNCTIONAL CHARACTERISATION OF PARTNER-SWITCHING REMARK 900 REGULATING THE ENVIRONMENTAL STRESS RESPONSE IN B. SUBTILIS REMARK 999 REMARK 999 SEQUENCE REMARK 999 RESIDUE E24 HAS BEEN MUTATED TO K DBREF 2J6Y A 1 111 UNP P40399 RSBU_BACSU 1 111 DBREF 2J6Y B 1 111 UNP P40399 RSBU_BACSU 1 111 DBREF 2J6Y C 1 111 UNP P40399 RSBU_BACSU 1 111 DBREF 2J6Y D 1 111 UNP P40399 RSBU_BACSU 1 111 DBREF 2J6Y E 1 111 UNP P40399 RSBU_BACSU 1 111 SEQADV 2J6Y LYS A 24 UNP P40399 GLU 24 ENGINEERED MUTATION SEQADV 2J6Y LYS B 24 UNP P40399 GLU 24 ENGINEERED MUTATION SEQADV 2J6Y LYS C 24 UNP P40399 GLU 24 ENGINEERED MUTATION SEQADV 2J6Y LYS D 24 UNP P40399 GLU 24 ENGINEERED MUTATION SEQADV 2J6Y LYS E 24 UNP P40399 GLU 24 ENGINEERED MUTATION SEQRES 1 A 111 MET ASP PHE ARG GLU VAL ILE GLU GLN ARG TYR HIS GLN SEQRES 2 A 111 LEU LEU SER ARG TYR ILE ALA GLU LEU THR LYS THR SER SEQRES 3 A 111 LEU TYR GLN ALA GLN LYS PHE SER ARG LYS THR ILE GLU SEQRES 4 A 111 HIS GLN ILE PRO PRO GLU GLU ILE ILE SER ILE HIS ARG SEQRES 5 A 111 LYS VAL LEU LYS GLU LEU TYR PRO SER LEU PRO GLU ASP SEQRES 6 A 111 VAL PHE HIS SER LEU ASP PHE LEU ILE GLU VAL MET ILE SEQRES 7 A 111 GLY TYR GLY MET ALA TYR GLN GLU HIS GLN THR LEU ARG SEQRES 8 A 111 GLY ILE GLN GLN GLU ILE LYS SER GLU ILE GLU ILE ALA SEQRES 9 A 111 ALA ASN VAL GLN GLN THR LEU SEQRES 1 B 111 MET ASP PHE ARG GLU VAL ILE GLU GLN ARG TYR HIS GLN SEQRES 2 B 111 LEU LEU SER ARG TYR ILE ALA GLU LEU THR LYS THR SER SEQRES 3 B 111 LEU TYR GLN ALA GLN LYS PHE SER ARG LYS THR ILE GLU SEQRES 4 B 111 HIS GLN ILE PRO PRO GLU GLU ILE ILE SER ILE HIS ARG SEQRES 5 B 111 LYS VAL LEU LYS GLU LEU TYR PRO SER LEU PRO GLU ASP SEQRES 6 B 111 VAL PHE HIS SER LEU ASP PHE LEU ILE GLU VAL MET ILE SEQRES 7 B 111 GLY TYR GLY MET ALA TYR GLN GLU HIS GLN THR LEU ARG SEQRES 8 B 111 GLY ILE GLN GLN GLU ILE LYS SER GLU ILE GLU ILE ALA SEQRES 9 B 111 ALA ASN VAL GLN GLN THR LEU SEQRES 1 C 111 MET ASP PHE ARG GLU VAL ILE GLU GLN ARG TYR HIS GLN SEQRES 2 C 111 LEU LEU SER ARG TYR ILE ALA GLU LEU THR LYS THR SER SEQRES 3 C 111 LEU TYR GLN ALA GLN LYS PHE SER ARG LYS THR ILE GLU SEQRES 4 C 111 HIS GLN ILE PRO PRO GLU GLU ILE ILE SER ILE HIS ARG SEQRES 5 C 111 LYS VAL LEU LYS GLU LEU TYR PRO SER LEU PRO GLU ASP SEQRES 6 C 111 VAL PHE HIS SER LEU ASP PHE LEU ILE GLU VAL MET ILE SEQRES 7 C 111 GLY TYR GLY MET ALA TYR GLN GLU HIS GLN THR LEU ARG SEQRES 8 C 111 GLY ILE GLN GLN GLU ILE LYS SER GLU ILE GLU ILE ALA SEQRES 9 C 111 ALA ASN VAL GLN GLN THR LEU SEQRES 1 D 111 MET ASP PHE ARG GLU VAL ILE GLU GLN ARG TYR HIS GLN SEQRES 2 D 111 LEU LEU SER ARG TYR ILE ALA GLU LEU THR LYS THR SER SEQRES 3 D 111 LEU TYR GLN ALA GLN LYS PHE SER ARG LYS THR ILE GLU SEQRES 4 D 111 HIS GLN ILE PRO PRO GLU GLU ILE ILE SER ILE HIS ARG SEQRES 5 D 111 LYS VAL LEU LYS GLU LEU TYR PRO SER LEU PRO GLU ASP SEQRES 6 D 111 VAL PHE HIS SER LEU ASP PHE LEU ILE GLU VAL MET ILE SEQRES 7 D 111 GLY TYR GLY MET ALA TYR GLN GLU HIS GLN THR LEU ARG SEQRES 8 D 111 GLY ILE GLN GLN GLU ILE LYS SER GLU ILE GLU ILE ALA SEQRES 9 D 111 ALA ASN VAL GLN GLN THR LEU SEQRES 1 E 111 MET ASP PHE ARG GLU VAL ILE GLU GLN ARG TYR HIS GLN SEQRES 2 E 111 LEU LEU SER ARG TYR ILE ALA GLU LEU THR LYS THR SER SEQRES 3 E 111 LEU TYR GLN ALA GLN LYS PHE SER ARG LYS THR ILE GLU SEQRES 4 E 111 HIS GLN ILE PRO PRO GLU GLU ILE ILE SER ILE HIS ARG SEQRES 5 E 111 LYS VAL LEU LYS GLU LEU TYR PRO SER LEU PRO GLU ASP SEQRES 6 E 111 VAL PHE HIS SER LEU ASP PHE LEU ILE GLU VAL MET ILE SEQRES 7 E 111 GLY TYR GLY MET ALA TYR GLN GLU HIS GLN THR LEU ARG SEQRES 8 E 111 GLY ILE GLN GLN GLU ILE LYS SER GLU ILE GLU ILE ALA SEQRES 9 E 111 ALA ASN VAL GLN GLN THR LEU FORMUL 6 HOH *348(H2 O) HELIX 1 1 ASP A 2 LEU A 22 1 21 HELIX 2 2 THR A 23 HIS A 40 1 18 HELIX 3 3 PRO A 43 TYR A 59 1 17 HELIX 4 4 PRO A 63 GLN A 85 1 23 HELIX 5 5 GLU B 5 LEU B 22 1 18 HELIX 6 6 THR B 23 HIS B 40 1 18 HELIX 7 7 PRO B 43 TYR B 59 1 17 HELIX 8 8 PRO B 63 GLN B 85 1 23 HELIX 9 9 VAL C 6 LEU C 22 1 17 HELIX 10 10 THR C 23 HIS C 40 1 18 HELIX 11 11 PRO C 43 TYR C 59 1 17 HELIX 12 12 PRO C 63 GLN C 85 1 23 HELIX 13 13 ASP D 2 LEU D 22 1 21 HELIX 14 14 THR D 23 HIS D 40 1 18 HELIX 15 15 PRO D 43 TYR D 59 1 17 HELIX 16 16 PRO D 63 GLN D 85 1 23 HELIX 17 17 ASP E 2 LEU E 22 1 21 HELIX 18 18 THR E 23 HIS E 40 1 18 HELIX 19 19 PRO E 43 TYR E 59 1 17 HELIX 20 20 PRO E 63 GLY E 79 1 17 HELIX 21 21 TYR E 80 MET E 82 5 3 CRYST1 100.157 47.831 94.968 90.00 104.36 90.00 C 1 2 1 20 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009984 0.000000 0.002556 0.00000 SCALE2 0.000000 0.020907 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010869 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.315790 -0.405960 0.857600 11.16532 1 MTRIX2 2 -0.453000 -0.729680 -0.512210 96.41347 1 MTRIX3 2 0.833710 -0.550240 0.046530 39.91925 1 MTRIX1 3 0.665360 -0.556280 -0.497850 16.80099 1 MTRIX2 3 0.663870 0.135890 0.735400 -11.33859 1 MTRIX3 3 -0.341440 -0.819810 0.459710 36.69727 1 MTRIX1 4 -0.386360 0.389770 0.835950 -48.49957 1 MTRIX2 4 0.367670 -0.766120 0.527150 38.22107 1 MTRIX3 4 0.845900 0.511020 0.152690 -29.12519 1 MTRIX1 5 -0.742350 -0.606660 0.284410 16.79219 1 MTRIX2 5 -0.580290 0.369950 -0.725540 55.11340 1 MTRIX3 5 0.334940 -0.703640 -0.626670 90.17612 1