data_2J7M
#
_entry.id 2J7M
#
_audit_conform.dict_name mmcif_pdbx.dic
_audit_conform.dict_version 5.391
_audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic
#
loop_
_database_2.database_id
_database_2.database_code
_database_2.pdbx_database_accession
_database_2.pdbx_DOI
PDB 2J7M pdb_00002j7m 10.2210/pdb2j7m/pdb
PDBE EBI-30224 ? ?
WWPDB D_1290030224 ? ?
#
loop_
_pdbx_audit_revision_history.ordinal
_pdbx_audit_revision_history.data_content_type
_pdbx_audit_revision_history.major_revision
_pdbx_audit_revision_history.minor_revision
_pdbx_audit_revision_history.revision_date
1 'Structure model' 1 0 2006-10-16
2 'Structure model' 1 1 2011-05-08
3 'Structure model' 1 2 2011-07-13
4 'Structure model' 2 0 2020-07-29
5 'Structure model' 2 1 2024-05-08
#
loop_
_pdbx_audit_revision_details.ordinal
_pdbx_audit_revision_details.revision_ordinal
_pdbx_audit_revision_details.data_content_type
_pdbx_audit_revision_details.provider
_pdbx_audit_revision_details.type
_pdbx_audit_revision_details.description
_pdbx_audit_revision_details.details
1 1 'Structure model' repository 'Initial release' ? ?
2 4 'Structure model' repository Remediation 'Carbohydrate remediation' ?
#
loop_
_pdbx_audit_revision_group.ordinal
_pdbx_audit_revision_group.revision_ordinal
_pdbx_audit_revision_group.data_content_type
_pdbx_audit_revision_group.group
1 2 'Structure model' 'Version format compliance'
2 3 'Structure model' 'Version format compliance'
3 4 'Structure model' 'Atomic model'
4 4 'Structure model' 'Data collection'
5 4 'Structure model' 'Derived calculations'
6 4 'Structure model' Other
7 4 'Structure model' 'Structure summary'
8 5 'Structure model' 'Data collection'
9 5 'Structure model' 'Database references'
10 5 'Structure model' 'Structure summary'
#
loop_
_pdbx_audit_revision_category.ordinal
_pdbx_audit_revision_category.revision_ordinal
_pdbx_audit_revision_category.data_content_type
_pdbx_audit_revision_category.category
1 4 'Structure model' atom_site
2 4 'Structure model' chem_comp
3 4 'Structure model' entity
4 4 'Structure model' entity_name_com
5 4 'Structure model' pdbx_branch_scheme
6 4 'Structure model' pdbx_chem_comp_identifier
7 4 'Structure model' pdbx_database_status
8 4 'Structure model' pdbx_entity_branch
9 4 'Structure model' pdbx_entity_branch_descriptor
10 4 'Structure model' pdbx_entity_branch_link
11 4 'Structure model' pdbx_entity_branch_list
12 4 'Structure model' pdbx_entity_nonpoly
13 4 'Structure model' pdbx_molecule_features
14 4 'Structure model' pdbx_nonpoly_scheme
15 4 'Structure model' pdbx_struct_assembly_gen
16 4 'Structure model' pdbx_struct_conn_angle
17 4 'Structure model' pdbx_struct_special_symmetry
18 4 'Structure model' struct_asym
19 4 'Structure model' struct_conn
20 4 'Structure model' struct_conn_type
21 4 'Structure model' struct_site
22 4 'Structure model' struct_site_gen
23 5 'Structure model' chem_comp
24 5 'Structure model' chem_comp_atom
25 5 'Structure model' chem_comp_bond
26 5 'Structure model' database_2
#
loop_
_pdbx_audit_revision_item.ordinal
_pdbx_audit_revision_item.revision_ordinal
_pdbx_audit_revision_item.data_content_type
_pdbx_audit_revision_item.item
1 4 'Structure model' '_atom_site.B_iso_or_equiv'
2 4 'Structure model' '_atom_site.Cartn_x'
3 4 'Structure model' '_atom_site.Cartn_y'
4 4 'Structure model' '_atom_site.Cartn_z'
5 4 'Structure model' '_atom_site.auth_asym_id'
6 4 'Structure model' '_atom_site.auth_atom_id'
7 4 'Structure model' '_atom_site.auth_comp_id'
8 4 'Structure model' '_atom_site.auth_seq_id'
9 4 'Structure model' '_atom_site.label_asym_id'
10 4 'Structure model' '_atom_site.label_atom_id'
11 4 'Structure model' '_atom_site.label_comp_id'
12 4 'Structure model' '_atom_site.label_entity_id'
13 4 'Structure model' '_atom_site.type_symbol'
14 4 'Structure model' '_chem_comp.name'
15 4 'Structure model' '_chem_comp.type'
16 4 'Structure model' '_pdbx_database_status.status_code_sf'
17 4 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list'
18 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'
19 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'
20 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id'
21 4 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'
22 4 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id'
23 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id'
24 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'
25 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id'
26 4 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id'
27 4 'Structure model' '_pdbx_struct_conn_angle.value'
28 4 'Structure model' '_pdbx_struct_special_symmetry.label_asym_id'
29 4 'Structure model' '_struct_conn.conn_type_id'
30 4 'Structure model' '_struct_conn.id'
31 4 'Structure model' '_struct_conn.pdbx_dist_value'
32 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag'
33 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id'
34 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id'
35 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id'
36 4 'Structure model' '_struct_conn.ptnr1_label_asym_id'
37 4 'Structure model' '_struct_conn.ptnr1_label_atom_id'
38 4 'Structure model' '_struct_conn.ptnr1_label_comp_id'
39 4 'Structure model' '_struct_conn.ptnr1_label_seq_id'
40 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id'
41 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id'
42 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id'
43 4 'Structure model' '_struct_conn.ptnr2_label_asym_id'
44 4 'Structure model' '_struct_conn.ptnr2_label_atom_id'
45 4 'Structure model' '_struct_conn.ptnr2_label_comp_id'
46 4 'Structure model' '_struct_conn.ptnr2_label_seq_id'
47 4 'Structure model' '_struct_conn_type.id'
48 5 'Structure model' '_chem_comp.pdbx_synonyms'
49 5 'Structure model' '_database_2.pdbx_DOI'
50 5 'Structure model' '_database_2.pdbx_database_accession'
#
_pdbx_database_PDB_obs_spr.id SPRSDE
_pdbx_database_PDB_obs_spr.date 2006-10-16
_pdbx_database_PDB_obs_spr.pdb_id 2J7M
_pdbx_database_PDB_obs_spr.replace_pdb_id 2J1F
_pdbx_database_PDB_obs_spr.details ?
#
_pdbx_database_status.status_code REL
_pdbx_database_status.entry_id 2J7M
_pdbx_database_status.deposit_site PDBE
_pdbx_database_status.process_site PDBE
_pdbx_database_status.SG_entry .
_pdbx_database_status.recvd_initial_deposition_date 2006-10-12
_pdbx_database_status.pdb_format_compatible Y
_pdbx_database_status.status_code_sf REL
_pdbx_database_status.status_code_mr ?
_pdbx_database_status.status_code_cs ?
_pdbx_database_status.methods_development_category ?
_pdbx_database_status.status_code_nmr_data ?
#
loop_
_pdbx_database_related.db_name
_pdbx_database_related.db_id
_pdbx_database_related.content_type
_pdbx_database_related.details
PDB 2CBI unspecified
'STRUCTURE OF THE CLOSTRIDIUM PERFRINGENS NAGJ FAMILY 84 GLYCOSIDE HYDROLASE, A HOMOLOGUE OF HUMAN O-GLCNACASE'
PDB 2CBJ unspecified
;STRUCTURE OF THE CLOSTRIDIUM PERFRINGENS NAGJ FAMILY 84 GLYCOSIDE HYDROLASE, A HOMOLOGUE OF HUMAN O-GLCNACASE IN COMPLEX WITH PUGNAC
;
PDB 2J1A unspecified 'STRUCTURE OF CBM32 FROM CLOSTRIDIUM PERFRINGENS BETA-N-ACETYLHEXOSAMINIDASE GH84C IN COMPLEX WITH GALACTOSE'
PDB 2J1E unspecified 'HIGH RESOLUTION CRYSTAL STRUCTURE OF CBM32 FROM A N-ACETYL-BETA-HEXOSAMINIDASE IN COMPLEX WITH LACNAC'
#
loop_
_audit_author.name
_audit_author.pdbx_ordinal
'Ficko-Blean, E.' 1
'Boraston, A.B.' 2
#
_citation.id primary
_citation.title
;The Interaction of a Carbohydrate-Binding Module from a Clostridium Perfringens N-Acetyl-Beta-Hexosaminidase with its Carbohydrate Receptor
;
_citation.journal_abbrev J.Biol.Chem.
_citation.journal_volume 281
_citation.page_first 37748
_citation.page_last ?
_citation.year 2006
_citation.journal_id_ASTM JBCHA3
_citation.country US
_citation.journal_id_ISSN 0021-9258
_citation.journal_id_CSD 0071
_citation.book_publisher ?
_citation.pdbx_database_id_PubMed 16990278
_citation.pdbx_database_id_DOI 10.1074/JBC.M606126200
#
loop_
_citation_author.citation_id
_citation_author.name
_citation_author.ordinal
_citation_author.identifier_ORCID
primary 'Ficko-Blean, E.' 1 ?
primary 'Boraston, A.B.' 2 ?
#
loop_
_entity.id
_entity.type
_entity.src_method
_entity.pdbx_description
_entity.formula_weight
_entity.pdbx_number_of_molecules
_entity.pdbx_ec
_entity.pdbx_mutation
_entity.pdbx_fragment
_entity.details
1 polymer man HYALURONIDASE 16285.709 1
? ? 'RESIDUES 625-767' ?
2 branched man 'alpha-L-fucopyranose-(1-2)-beta-D-galactopyranose-(1-4)-2-acetamido-2-deoxy-alpha-D-glucopyranose' 529.490 1
? ? ? ?
3 non-polymer syn 'CALCIUM ION' 40.078 1
? ? ? ?
4 water nat water 18.015
209 ? ? ? ?
#
loop_
_entity_name_com.entity_id
_entity_name_com.name
1 CBM32
2 'H type 2 antigen, alpha anomer'
#
_entity_poly.entity_id 1
_entity_poly.type 'polypeptide(L)'
_entity_poly.nstd_linkage no
_entity_poly.nstd_monomer no
_entity_poly.pdbx_seq_one_letter_code
;GIDPFTNPRTVKITASSEETSGENAPASFASDGDMNTFWHSKWSSPAHEGPHHLTLELDNVYEINKVKYAPRQDSKNGRI
TGYKVSVSLDGENFTEVKTGTLEDNAAIKFIEFDSVDAKYVRLDVTDSVSDQANGRGKFATAAEVNVHG
;
_entity_poly.pdbx_seq_one_letter_code_can
;GIDPFTNPRTVKITASSEETSGENAPASFASDGDMNTFWHSKWSSPAHEGPHHLTLELDNVYEINKVKYAPRQDSKNGRI
TGYKVSVSLDGENFTEVKTGTLEDNAAIKFIEFDSVDAKYVRLDVTDSVSDQANGRGKFATAAEVNVHG
;
_entity_poly.pdbx_strand_id A
_entity_poly.pdbx_target_identifier ?
#
loop_
_pdbx_entity_nonpoly.entity_id
_pdbx_entity_nonpoly.name
_pdbx_entity_nonpoly.comp_id
3 'CALCIUM ION' CA
4 water HOH
#
loop_
_entity_poly_seq.entity_id
_entity_poly_seq.num
_entity_poly_seq.mon_id
_entity_poly_seq.hetero
1 1 GLY n
1 2 ILE n
1 3 ASP n
1 4 PRO n
1 5 PHE n
1 6 THR n
1 7 ASN n
1 8 PRO n
1 9 ARG n
1 10 THR n
1 11 VAL n
1 12 LYS n
1 13 ILE n
1 14 THR n
1 15 ALA n
1 16 SER n
1 17 SER n
1 18 GLU n
1 19 GLU n
1 20 THR n
1 21 SER n
1 22 GLY n
1 23 GLU n
1 24 ASN n
1 25 ALA n
1 26 PRO n
1 27 ALA n
1 28 SER n
1 29 PHE n
1 30 ALA n
1 31 SER n
1 32 ASP n
1 33 GLY n
1 34 ASP n
1 35 MET n
1 36 ASN n
1 37 THR n
1 38 PHE n
1 39 TRP n
1 40 HIS n
1 41 SER n
1 42 LYS n
1 43 TRP n
1 44 SER n
1 45 SER n
1 46 PRO n
1 47 ALA n
1 48 HIS n
1 49 GLU n
1 50 GLY n
1 51 PRO n
1 52 HIS n
1 53 HIS n
1 54 LEU n
1 55 THR n
1 56 LEU n
1 57 GLU n
1 58 LEU n
1 59 ASP n
1 60 ASN n
1 61 VAL n
1 62 TYR n
1 63 GLU n
1 64 ILE n
1 65 ASN n
1 66 LYS n
1 67 VAL n
1 68 LYS n
1 69 TYR n
1 70 ALA n
1 71 PRO n
1 72 ARG n
1 73 GLN n
1 74 ASP n
1 75 SER n
1 76 LYS n
1 77 ASN n
1 78 GLY n
1 79 ARG n
1 80 ILE n
1 81 THR n
1 82 GLY n
1 83 TYR n
1 84 LYS n
1 85 VAL n
1 86 SER n
1 87 VAL n
1 88 SER n
1 89 LEU n
1 90 ASP n
1 91 GLY n
1 92 GLU n
1 93 ASN n
1 94 PHE n
1 95 THR n
1 96 GLU n
1 97 VAL n
1 98 LYS n
1 99 THR n
1 100 GLY n
1 101 THR n
1 102 LEU n
1 103 GLU n
1 104 ASP n
1 105 ASN n
1 106 ALA n
1 107 ALA n
1 108 ILE n
1 109 LYS n
1 110 PHE n
1 111 ILE n
1 112 GLU n
1 113 PHE n
1 114 ASP n
1 115 SER n
1 116 VAL n
1 117 ASP n
1 118 ALA n
1 119 LYS n
1 120 TYR n
1 121 VAL n
1 122 ARG n
1 123 LEU n
1 124 ASP n
1 125 VAL n
1 126 THR n
1 127 ASP n
1 128 SER n
1 129 VAL n
1 130 SER n
1 131 ASP n
1 132 GLN n
1 133 ALA n
1 134 ASN n
1 135 GLY n
1 136 ARG n
1 137 GLY n
1 138 LYS n
1 139 PHE n
1 140 ALA n
1 141 THR n
1 142 ALA n
1 143 ALA n
1 144 GLU n
1 145 VAL n
1 146 ASN n
1 147 VAL n
1 148 HIS n
1 149 GLY n
#
_entity_src_gen.entity_id 1
_entity_src_gen.pdbx_src_id 1
_entity_src_gen.pdbx_alt_source_flag sample
_entity_src_gen.pdbx_seq_type ?
_entity_src_gen.pdbx_beg_seq_num ?
_entity_src_gen.pdbx_end_seq_num ?
_entity_src_gen.gene_src_common_name ?
_entity_src_gen.gene_src_genus ?
_entity_src_gen.pdbx_gene_src_gene ?
_entity_src_gen.gene_src_species ?
_entity_src_gen.gene_src_strain ?
_entity_src_gen.gene_src_tissue ?
_entity_src_gen.gene_src_tissue_fraction ?
_entity_src_gen.gene_src_details ?
_entity_src_gen.pdbx_gene_src_fragment ?
_entity_src_gen.pdbx_gene_src_scientific_name 'CLOSTRIDIUM PERFRINGENS'
_entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1502
_entity_src_gen.pdbx_gene_src_variant ?
_entity_src_gen.pdbx_gene_src_cell_line ?
_entity_src_gen.pdbx_gene_src_atcc 13124
_entity_src_gen.pdbx_gene_src_organ ?
_entity_src_gen.pdbx_gene_src_organelle ?
_entity_src_gen.pdbx_gene_src_cell ?
_entity_src_gen.pdbx_gene_src_cellular_location ?
_entity_src_gen.host_org_common_name ?
_entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI'
_entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562
_entity_src_gen.host_org_genus ?
_entity_src_gen.pdbx_host_org_gene ?
_entity_src_gen.pdbx_host_org_organ ?
_entity_src_gen.host_org_species ?
_entity_src_gen.pdbx_host_org_tissue ?
_entity_src_gen.pdbx_host_org_tissue_fraction ?
_entity_src_gen.pdbx_host_org_strain ?
_entity_src_gen.pdbx_host_org_variant ?
_entity_src_gen.pdbx_host_org_cell_line ?
_entity_src_gen.pdbx_host_org_atcc ?
_entity_src_gen.pdbx_host_org_culture_collection ?
_entity_src_gen.pdbx_host_org_cell ?
_entity_src_gen.pdbx_host_org_organelle ?
_entity_src_gen.pdbx_host_org_cellular_location ?
_entity_src_gen.pdbx_host_org_vector_type ?
_entity_src_gen.pdbx_host_org_vector ?
_entity_src_gen.host_org_details ?
_entity_src_gen.expression_system_id ?
_entity_src_gen.plasmid_name ?
_entity_src_gen.plasmid_details ?
_entity_src_gen.pdbx_description ?
#
_pdbx_entity_branch.entity_id 2
_pdbx_entity_branch.type oligosaccharide
#
loop_
_pdbx_entity_branch_descriptor.ordinal
_pdbx_entity_branch_descriptor.entity_id
_pdbx_entity_branch_descriptor.descriptor
_pdbx_entity_branch_descriptor.type
_pdbx_entity_branch_descriptor.program
_pdbx_entity_branch_descriptor.program_version
1 2 LFucpa1-2DGalpb1-4DGlcpNAca1-ROH 'Glycam Condensed Sequence' GMML
1.0
2 2 'WURCS=2.0/3,3,2/[a2122h-1a_1-5_2*NCC/3=O][a2112h-1b_1-5][a1221m-1a_1-5]/1-2-3/a4-b1_b2-c1' WURCS
PDB2Glycan 1.1.0
3 2 '[][a-D-GlcpNAc]{[(4+1)][b-D-Galp]{[(2+1)][a-L-Fucp]{}}}' LINUCS
PDB-CARE ?
#
loop_
_pdbx_entity_branch_link.link_id
_pdbx_entity_branch_link.entity_id
_pdbx_entity_branch_link.entity_branch_list_num_1
_pdbx_entity_branch_link.comp_id_1
_pdbx_entity_branch_link.atom_id_1
_pdbx_entity_branch_link.leaving_atom_id_1
_pdbx_entity_branch_link.entity_branch_list_num_2
_pdbx_entity_branch_link.comp_id_2
_pdbx_entity_branch_link.atom_id_2
_pdbx_entity_branch_link.leaving_atom_id_2
_pdbx_entity_branch_link.value_order
_pdbx_entity_branch_link.details
1 2 2 GAL C1 O1 1 NDG O4 HO4 sing ?
2 2 3 FUC C1 O1 2 GAL O2 HO2 sing ?
#
loop_
_chem_comp.id
_chem_comp.type
_chem_comp.mon_nstd_flag
_chem_comp.name
_chem_comp.pdbx_synonyms
_chem_comp.formula
_chem_comp.formula_weight
ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093
ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209
ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118
ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103
CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078
FUC 'L-saccharide, alpha linking' . alpha-L-fucopyranose
'alpha-L-fucose; 6-deoxy-alpha-L-galactopyranose; L-fucose; fucose' 'C6 H12 O5' 164.156
GAL 'D-saccharide, beta linking' . beta-D-galactopyranose 'beta-D-galactose; D-galactose; galactose'
'C6 H12 O6' 180.156
GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144
GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129
GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067
HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162
HOH non-polymer . WATER ? 'H2 O' 18.015
ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173
LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173
LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195
MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211
NDG 'D-saccharide, alpha linking' . 2-acetamido-2-deoxy-alpha-D-glucopyranose
;N-acetyl-alpha-D-glucosamine; 2-acetamido-2-deoxy-alpha-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; 2-(ACETYLAMINO)-2-DEOXY-A-D-GLUCOPYRANOSE
;
'C8 H15 N O6' 221.208
PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189
PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130
SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093
THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119
TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225
TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189
VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146
#
loop_
_pdbx_chem_comp_identifier.comp_id
_pdbx_chem_comp_identifier.type
_pdbx_chem_comp_identifier.program
_pdbx_chem_comp_identifier.program_version
_pdbx_chem_comp_identifier.identifier
FUC 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 LFucpa
FUC 'COMMON NAME' GMML 1.0 a-L-fucopyranose
FUC 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-L-Fucp
FUC 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Fuc
GAL 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGalpb
GAL 'COMMON NAME' GMML 1.0 b-D-galactopyranose
GAL 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Galp
GAL 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Gal
NDG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAca
NDG 'COMMON NAME' GMML 1.0 N-acetyl-a-D-glucopyranosamine
NDG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-GlcpNAc
NDG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc
#
loop_
_pdbx_poly_seq_scheme.asym_id
_pdbx_poly_seq_scheme.entity_id
_pdbx_poly_seq_scheme.seq_id
_pdbx_poly_seq_scheme.mon_id
_pdbx_poly_seq_scheme.ndb_seq_num
_pdbx_poly_seq_scheme.pdb_seq_num
_pdbx_poly_seq_scheme.auth_seq_num
_pdbx_poly_seq_scheme.pdb_mon_id
_pdbx_poly_seq_scheme.auth_mon_id
_pdbx_poly_seq_scheme.pdb_strand_id
_pdbx_poly_seq_scheme.pdb_ins_code
_pdbx_poly_seq_scheme.hetero
A 1 1 GLY 1 619 ? ? ? A . n
A 1 2 ILE 2 620 ? ? ? A . n
A 1 3 ASP 3 621 ? ? ? A . n
A 1 4 PRO 4 622 ? ? ? A . n
A 1 5 PHE 5 623 ? ? ? A . n
A 1 6 THR 6 624 ? ? ? A . n
A 1 7 ASN 7 625 625 ASN ASN A . n
A 1 8 PRO 8 626 626 PRO PRO A . n
A 1 9 ARG 9 627 627 ARG ARG A . n
A 1 10 THR 10 628 628 THR THR A . n
A 1 11 VAL 11 629 629 VAL VAL A . n
A 1 12 LYS 12 630 630 LYS LYS A . n
A 1 13 ILE 13 631 631 ILE ILE A . n
A 1 14 THR 14 632 632 THR THR A . n
A 1 15 ALA 15 633 633 ALA ALA A . n
A 1 16 SER 16 634 634 SER SER A . n
A 1 17 SER 17 635 635 SER SER A . n
A 1 18 GLU 18 636 636 GLU GLU A . n
A 1 19 GLU 19 637 637 GLU GLU A . n
A 1 20 THR 20 638 638 THR THR A . n
A 1 21 SER 21 639 639 SER SER A . n
A 1 22 GLY 22 640 640 GLY GLY A . n
A 1 23 GLU 23 641 641 GLU GLU A . n
A 1 24 ASN 24 642 642 ASN ASN A . n
A 1 25 ALA 25 643 643 ALA ALA A . n
A 1 26 PRO 26 644 644 PRO PRO A . n
A 1 27 ALA 27 645 645 ALA ALA A . n
A 1 28 SER 28 646 646 SER SER A . n
A 1 29 PHE 29 647 647 PHE PHE A . n
A 1 30 ALA 30 648 648 ALA ALA A . n
A 1 31 SER 31 649 649 SER SER A . n
A 1 32 ASP 32 650 650 ASP ASP A . n
A 1 33 GLY 33 651 651 GLY GLY A . n
A 1 34 ASP 34 652 652 ASP ASP A . n
A 1 35 MET 35 653 653 MET MET A . n
A 1 36 ASN 36 654 654 ASN ASN A . n
A 1 37 THR 37 655 655 THR THR A . n
A 1 38 PHE 38 656 656 PHE PHE A . n
A 1 39 TRP 39 657 657 TRP TRP A . n
A 1 40 HIS 40 658 658 HIS HIS A . n
A 1 41 SER 41 659 659 SER SER A . n
A 1 42 LYS 42 660 660 LYS LYS A . n
A 1 43 TRP 43 661 661 TRP TRP A . n
A 1 44 SER 44 662 662 SER SER A . n
A 1 45 SER 45 663 663 SER SER A . n
A 1 46 PRO 46 664 664 PRO PRO A . n
A 1 47 ALA 47 665 665 ALA ALA A . n
A 1 48 HIS 48 666 666 HIS HIS A . n
A 1 49 GLU 49 667 667 GLU GLU A . n
A 1 50 GLY 50 668 668 GLY GLY A . n
A 1 51 PRO 51 669 669 PRO PRO A . n
A 1 52 HIS 52 670 670 HIS HIS A . n
A 1 53 HIS 53 671 671 HIS HIS A . n
A 1 54 LEU 54 672 672 LEU LEU A . n
A 1 55 THR 55 673 673 THR THR A . n
A 1 56 LEU 56 674 674 LEU LEU A . n
A 1 57 GLU 57 675 675 GLU GLU A . n
A 1 58 LEU 58 676 676 LEU LEU A . n
A 1 59 ASP 59 677 677 ASP ASP A . n
A 1 60 ASN 60 678 678 ASN ASN A . n
A 1 61 VAL 61 679 679 VAL VAL A . n
A 1 62 TYR 62 680 680 TYR TYR A . n
A 1 63 GLU 63 681 681 GLU GLU A . n
A 1 64 ILE 64 682 682 ILE ILE A . n
A 1 65 ASN 65 683 683 ASN ASN A . n
A 1 66 LYS 66 684 684 LYS LYS A . n
A 1 67 VAL 67 685 685 VAL VAL A . n
A 1 68 LYS 68 686 686 LYS LYS A . n
A 1 69 TYR 69 687 687 TYR TYR A . n
A 1 70 ALA 70 688 688 ALA ALA A . n
A 1 71 PRO 71 689 689 PRO PRO A . n
A 1 72 ARG 72 690 690 ARG ARG A . n
A 1 73 GLN 73 691 691 GLN GLN A . n
A 1 74 ASP 74 692 692 ASP ASP A . n
A 1 75 SER 75 693 693 SER SER A . n
A 1 76 LYS 76 694 694 LYS LYS A . n
A 1 77 ASN 77 695 695 ASN ASN A . n
A 1 78 GLY 78 696 696 GLY GLY A . n
A 1 79 ARG 79 697 697 ARG ARG A . n
A 1 80 ILE 80 698 698 ILE ILE A . n
A 1 81 THR 81 699 699 THR THR A . n
A 1 82 GLY 82 700 700 GLY GLY A . n
A 1 83 TYR 83 701 701 TYR TYR A . n
A 1 84 LYS 84 702 702 LYS LYS A . n
A 1 85 VAL 85 703 703 VAL VAL A . n
A 1 86 SER 86 704 704 SER SER A . n
A 1 87 VAL 87 705 705 VAL VAL A . n
A 1 88 SER 88 706 706 SER SER A . n
A 1 89 LEU 89 707 707 LEU LEU A . n
A 1 90 ASP 90 708 708 ASP ASP A . n
A 1 91 GLY 91 709 709 GLY GLY A . n
A 1 92 GLU 92 710 710 GLU GLU A . n
A 1 93 ASN 93 711 711 ASN ASN A . n
A 1 94 PHE 94 712 712 PHE PHE A . n
A 1 95 THR 95 713 713 THR THR A . n
A 1 96 GLU 96 714 714 GLU GLU A . n
A 1 97 VAL 97 715 715 VAL VAL A . n
A 1 98 LYS 98 716 716 LYS LYS A . n
A 1 99 THR 99 717 717 THR THR A . n
A 1 100 GLY 100 718 718 GLY GLY A . n
A 1 101 THR 101 719 719 THR THR A . n
A 1 102 LEU 102 720 720 LEU LEU A . n
A 1 103 GLU 103 721 721 GLU GLU A . n
A 1 104 ASP 104 722 722 ASP ASP A . n
A 1 105 ASN 105 723 723 ASN ASN A . n
A 1 106 ALA 106 724 724 ALA ALA A . n
A 1 107 ALA 107 725 725 ALA ALA A . n
A 1 108 ILE 108 726 726 ILE ILE A . n
A 1 109 LYS 109 727 727 LYS LYS A . n
A 1 110 PHE 110 728 728 PHE PHE A . n
A 1 111 ILE 111 729 729 ILE ILE A . n
A 1 112 GLU 112 730 730 GLU GLU A . n
A 1 113 PHE 113 731 731 PHE PHE A . n
A 1 114 ASP 114 732 732 ASP ASP A . n
A 1 115 SER 115 733 733 SER SER A . n
A 1 116 VAL 116 734 734 VAL VAL A . n
A 1 117 ASP 117 735 735 ASP ASP A . n
A 1 118 ALA 118 736 736 ALA ALA A . n
A 1 119 LYS 119 737 737 LYS LYS A . n
A 1 120 TYR 120 738 738 TYR TYR A . n
A 1 121 VAL 121 739 739 VAL VAL A . n
A 1 122 ARG 122 740 740 ARG ARG A . n
A 1 123 LEU 123 741 741 LEU LEU A . n
A 1 124 ASP 124 742 742 ASP ASP A . n
A 1 125 VAL 125 743 743 VAL VAL A . n
A 1 126 THR 126 744 744 THR THR A . n
A 1 127 ASP 127 745 745 ASP ASP A . n
A 1 128 SER 128 746 746 SER SER A . n
A 1 129 VAL 129 747 747 VAL VAL A . n
A 1 130 SER 130 748 748 SER SER A . n
A 1 131 ASP 131 749 749 ASP ASP A . n
A 1 132 GLN 132 750 750 GLN GLN A . n
A 1 133 ALA 133 751 751 ALA ALA A . n
A 1 134 ASN 134 752 752 ASN ASN A . n
A 1 135 GLY 135 753 753 GLY GLY A . n
A 1 136 ARG 136 754 754 ARG ARG A . n
A 1 137 GLY 137 755 755 GLY GLY A . n
A 1 138 LYS 138 756 756 LYS LYS A . n
A 1 139 PHE 139 757 757 PHE PHE A . n
A 1 140 ALA 140 758 758 ALA ALA A . n
A 1 141 THR 141 759 759 THR THR A . n
A 1 142 ALA 142 760 760 ALA ALA A . n
A 1 143 ALA 143 761 761 ALA ALA A . n
A 1 144 GLU 144 762 762 GLU GLU A . n
A 1 145 VAL 145 763 763 VAL VAL A . n
A 1 146 ASN 146 764 764 ASN ASN A . n
A 1 147 VAL 147 765 765 VAL VAL A . n
A 1 148 HIS 148 766 766 HIS HIS A . n
A 1 149 GLY 149 767 767 GLY GLY A . n
#
loop_
_pdbx_branch_scheme.asym_id
_pdbx_branch_scheme.entity_id
_pdbx_branch_scheme.mon_id
_pdbx_branch_scheme.num
_pdbx_branch_scheme.pdb_asym_id
_pdbx_branch_scheme.pdb_mon_id
_pdbx_branch_scheme.pdb_seq_num
_pdbx_branch_scheme.auth_asym_id
_pdbx_branch_scheme.auth_mon_id
_pdbx_branch_scheme.auth_seq_num
_pdbx_branch_scheme.hetero
B 2 NDG 1 B NDG 1 A NDG 1769 n
B 2 GAL 2 B GAL 2 A GAL 1770 n
B 2 FUC 3 B FUC 3 A FUC 1771 n
#
loop_
_pdbx_nonpoly_scheme.asym_id
_pdbx_nonpoly_scheme.entity_id
_pdbx_nonpoly_scheme.mon_id
_pdbx_nonpoly_scheme.ndb_seq_num
_pdbx_nonpoly_scheme.pdb_seq_num
_pdbx_nonpoly_scheme.auth_seq_num
_pdbx_nonpoly_scheme.pdb_mon_id
_pdbx_nonpoly_scheme.auth_mon_id
_pdbx_nonpoly_scheme.pdb_strand_id
_pdbx_nonpoly_scheme.pdb_ins_code
C 3 CA 1 1768 1768 CA CA A .
D 4 HOH 1 2001 2001 HOH HOH A .
D 4 HOH 2 2002 2002 HOH HOH A .
D 4 HOH 3 2003 2003 HOH HOH A .
D 4 HOH 4 2004 2004 HOH HOH A .
D 4 HOH 5 2005 2005 HOH HOH A .
D 4 HOH 6 2006 2006 HOH HOH A .
D 4 HOH 7 2007 2007 HOH HOH A .
D 4 HOH 8 2008 2008 HOH HOH A .
D 4 HOH 9 2009 2009 HOH HOH A .
D 4 HOH 10 2010 2010 HOH HOH A .
D 4 HOH 11 2011 2011 HOH HOH A .
D 4 HOH 12 2012 2012 HOH HOH A .
D 4 HOH 13 2013 2013 HOH HOH A .
D 4 HOH 14 2014 2014 HOH HOH A .
D 4 HOH 15 2015 2015 HOH HOH A .
D 4 HOH 16 2016 2016 HOH HOH A .
D 4 HOH 17 2017 2017 HOH HOH A .
D 4 HOH 18 2018 2018 HOH HOH A .
D 4 HOH 19 2019 2019 HOH HOH A .
D 4 HOH 20 2020 2020 HOH HOH A .
D 4 HOH 21 2021 2021 HOH HOH A .
D 4 HOH 22 2022 2022 HOH HOH A .
D 4 HOH 23 2023 2023 HOH HOH A .
D 4 HOH 24 2024 2024 HOH HOH A .
D 4 HOH 25 2025 2025 HOH HOH A .
D 4 HOH 26 2026 2026 HOH HOH A .
D 4 HOH 27 2027 2027 HOH HOH A .
D 4 HOH 28 2028 2028 HOH HOH A .
D 4 HOH 29 2029 2029 HOH HOH A .
D 4 HOH 30 2030 2030 HOH HOH A .
D 4 HOH 31 2031 2031 HOH HOH A .
D 4 HOH 32 2032 2032 HOH HOH A .
D 4 HOH 33 2033 2033 HOH HOH A .
D 4 HOH 34 2034 2034 HOH HOH A .
D 4 HOH 35 2035 2035 HOH HOH A .
D 4 HOH 36 2036 2036 HOH HOH A .
D 4 HOH 37 2037 2037 HOH HOH A .
D 4 HOH 38 2038 2038 HOH HOH A .
D 4 HOH 39 2039 2039 HOH HOH A .
D 4 HOH 40 2040 2040 HOH HOH A .
D 4 HOH 41 2041 2041 HOH HOH A .
D 4 HOH 42 2042 2042 HOH HOH A .
D 4 HOH 43 2043 2043 HOH HOH A .
D 4 HOH 44 2044 2044 HOH HOH A .
D 4 HOH 45 2045 2045 HOH HOH A .
D 4 HOH 46 2046 2046 HOH HOH A .
D 4 HOH 47 2047 2047 HOH HOH A .
D 4 HOH 48 2048 2048 HOH HOH A .
D 4 HOH 49 2049 2049 HOH HOH A .
D 4 HOH 50 2050 2050 HOH HOH A .
D 4 HOH 51 2051 2051 HOH HOH A .
D 4 HOH 52 2052 2052 HOH HOH A .
D 4 HOH 53 2053 2053 HOH HOH A .
D 4 HOH 54 2054 2054 HOH HOH A .
D 4 HOH 55 2055 2055 HOH HOH A .
D 4 HOH 56 2056 2056 HOH HOH A .
D 4 HOH 57 2057 2057 HOH HOH A .
D 4 HOH 58 2058 2058 HOH HOH A .
D 4 HOH 59 2059 2059 HOH HOH A .
D 4 HOH 60 2060 2060 HOH HOH A .
D 4 HOH 61 2061 2061 HOH HOH A .
D 4 HOH 62 2062 2062 HOH HOH A .
D 4 HOH 63 2063 2063 HOH HOH A .
D 4 HOH 64 2064 2064 HOH HOH A .
D 4 HOH 65 2065 2065 HOH HOH A .
D 4 HOH 66 2066 2066 HOH HOH A .
D 4 HOH 67 2067 2067 HOH HOH A .
D 4 HOH 68 2068 2068 HOH HOH A .
D 4 HOH 69 2069 2069 HOH HOH A .
D 4 HOH 70 2070 2070 HOH HOH A .
D 4 HOH 71 2071 2071 HOH HOH A .
D 4 HOH 72 2072 2072 HOH HOH A .
D 4 HOH 73 2073 2073 HOH HOH A .
D 4 HOH 74 2074 2074 HOH HOH A .
D 4 HOH 75 2075 2075 HOH HOH A .
D 4 HOH 76 2076 2076 HOH HOH A .
D 4 HOH 77 2077 2077 HOH HOH A .
D 4 HOH 78 2078 2078 HOH HOH A .
D 4 HOH 79 2079 2079 HOH HOH A .
D 4 HOH 80 2080 2080 HOH HOH A .
D 4 HOH 81 2081 2081 HOH HOH A .
D 4 HOH 82 2082 2082 HOH HOH A .
D 4 HOH 83 2083 2083 HOH HOH A .
D 4 HOH 84 2084 2084 HOH HOH A .
D 4 HOH 85 2085 2085 HOH HOH A .
D 4 HOH 86 2086 2086 HOH HOH A .
D 4 HOH 87 2087 2087 HOH HOH A .
D 4 HOH 88 2088 2088 HOH HOH A .
D 4 HOH 89 2089 2089 HOH HOH A .
D 4 HOH 90 2090 2090 HOH HOH A .
D 4 HOH 91 2091 2091 HOH HOH A .
D 4 HOH 92 2092 2092 HOH HOH A .
D 4 HOH 93 2093 2093 HOH HOH A .
D 4 HOH 94 2094 2094 HOH HOH A .
D 4 HOH 95 2095 2095 HOH HOH A .
D 4 HOH 96 2096 2096 HOH HOH A .
D 4 HOH 97 2097 2097 HOH HOH A .
D 4 HOH 98 2098 2098 HOH HOH A .
D 4 HOH 99 2099 2099 HOH HOH A .
D 4 HOH 100 2100 2100 HOH HOH A .
D 4 HOH 101 2101 2101 HOH HOH A .
D 4 HOH 102 2102 2102 HOH HOH A .
D 4 HOH 103 2103 2103 HOH HOH A .
D 4 HOH 104 2104 2104 HOH HOH A .
D 4 HOH 105 2105 2105 HOH HOH A .
D 4 HOH 106 2106 2106 HOH HOH A .
D 4 HOH 107 2107 2107 HOH HOH A .
D 4 HOH 108 2108 2108 HOH HOH A .
D 4 HOH 109 2109 2109 HOH HOH A .
D 4 HOH 110 2110 2110 HOH HOH A .
D 4 HOH 111 2111 2111 HOH HOH A .
D 4 HOH 112 2112 2112 HOH HOH A .
D 4 HOH 113 2113 2113 HOH HOH A .
D 4 HOH 114 2114 2114 HOH HOH A .
D 4 HOH 115 2115 2115 HOH HOH A .
D 4 HOH 116 2116 2116 HOH HOH A .
D 4 HOH 117 2117 2117 HOH HOH A .
D 4 HOH 118 2118 2118 HOH HOH A .
D 4 HOH 119 2119 2119 HOH HOH A .
D 4 HOH 120 2120 2120 HOH HOH A .
D 4 HOH 121 2121 2121 HOH HOH A .
D 4 HOH 122 2122 2122 HOH HOH A .
D 4 HOH 123 2123 2123 HOH HOH A .
D 4 HOH 124 2124 2124 HOH HOH A .
D 4 HOH 125 2125 2125 HOH HOH A .
D 4 HOH 126 2126 2126 HOH HOH A .
D 4 HOH 127 2127 2127 HOH HOH A .
D 4 HOH 128 2128 2128 HOH HOH A .
D 4 HOH 129 2129 2129 HOH HOH A .
D 4 HOH 130 2130 2130 HOH HOH A .
D 4 HOH 131 2131 2131 HOH HOH A .
D 4 HOH 132 2132 2132 HOH HOH A .
D 4 HOH 133 2133 2133 HOH HOH A .
D 4 HOH 134 2134 2134 HOH HOH A .
D 4 HOH 135 2135 2135 HOH HOH A .
D 4 HOH 136 2136 2136 HOH HOH A .
D 4 HOH 137 2137 2137 HOH HOH A .
D 4 HOH 138 2138 2138 HOH HOH A .
D 4 HOH 139 2139 2139 HOH HOH A .
D 4 HOH 140 2140 2140 HOH HOH A .
D 4 HOH 141 2141 2141 HOH HOH A .
D 4 HOH 142 2142 2142 HOH HOH A .
D 4 HOH 143 2143 2143 HOH HOH A .
D 4 HOH 144 2144 2144 HOH HOH A .
D 4 HOH 145 2145 2145 HOH HOH A .
D 4 HOH 146 2146 2146 HOH HOH A .
D 4 HOH 147 2147 2147 HOH HOH A .
D 4 HOH 148 2148 2148 HOH HOH A .
D 4 HOH 149 2149 2149 HOH HOH A .
D 4 HOH 150 2150 2150 HOH HOH A .
D 4 HOH 151 2151 2151 HOH HOH A .
D 4 HOH 152 2152 2152 HOH HOH A .
D 4 HOH 153 2153 2153 HOH HOH A .
D 4 HOH 154 2154 2154 HOH HOH A .
D 4 HOH 155 2155 2155 HOH HOH A .
D 4 HOH 156 2156 2156 HOH HOH A .
D 4 HOH 157 2157 2157 HOH HOH A .
D 4 HOH 158 2158 2158 HOH HOH A .
D 4 HOH 159 2159 2159 HOH HOH A .
D 4 HOH 160 2160 2160 HOH HOH A .
D 4 HOH 161 2161 2161 HOH HOH A .
D 4 HOH 162 2162 2162 HOH HOH A .
D 4 HOH 163 2163 2163 HOH HOH A .
D 4 HOH 164 2164 2164 HOH HOH A .
D 4 HOH 165 2165 2165 HOH HOH A .
D 4 HOH 166 2166 2166 HOH HOH A .
D 4 HOH 167 2167 2167 HOH HOH A .
D 4 HOH 168 2168 2168 HOH HOH A .
D 4 HOH 169 2169 2169 HOH HOH A .
D 4 HOH 170 2170 2170 HOH HOH A .
D 4 HOH 171 2171 2171 HOH HOH A .
D 4 HOH 172 2172 2172 HOH HOH A .
D 4 HOH 173 2173 2173 HOH HOH A .
D 4 HOH 174 2174 2174 HOH HOH A .
D 4 HOH 175 2175 2175 HOH HOH A .
D 4 HOH 176 2176 2176 HOH HOH A .
D 4 HOH 177 2177 2177 HOH HOH A .
D 4 HOH 178 2178 2178 HOH HOH A .
D 4 HOH 179 2179 2179 HOH HOH A .
D 4 HOH 180 2180 2180 HOH HOH A .
D 4 HOH 181 2181 2181 HOH HOH A .
D 4 HOH 182 2182 2182 HOH HOH A .
D 4 HOH 183 2183 2183 HOH HOH A .
D 4 HOH 184 2184 2184 HOH HOH A .
D 4 HOH 185 2185 2185 HOH HOH A .
D 4 HOH 186 2186 2186 HOH HOH A .
D 4 HOH 187 2187 2187 HOH HOH A .
D 4 HOH 188 2188 2188 HOH HOH A .
D 4 HOH 189 2189 2189 HOH HOH A .
D 4 HOH 190 2190 2190 HOH HOH A .
D 4 HOH 191 2191 2191 HOH HOH A .
D 4 HOH 192 2192 2192 HOH HOH A .
D 4 HOH 193 2193 2193 HOH HOH A .
D 4 HOH 194 2194 2194 HOH HOH A .
D 4 HOH 195 2195 2195 HOH HOH A .
D 4 HOH 196 2196 2196 HOH HOH A .
D 4 HOH 197 2197 2197 HOH HOH A .
D 4 HOH 198 2198 2198 HOH HOH A .
D 4 HOH 199 2199 2199 HOH HOH A .
D 4 HOH 200 2200 2200 HOH HOH A .
D 4 HOH 201 2201 2201 HOH HOH A .
D 4 HOH 202 2202 2202 HOH HOH A .
D 4 HOH 203 2203 2203 HOH HOH A .
D 4 HOH 204 2204 2204 HOH HOH A .
D 4 HOH 205 2205 2205 HOH HOH A .
D 4 HOH 206 2206 2206 HOH HOH A .
D 4 HOH 207 2207 2207 HOH HOH A .
D 4 HOH 208 2208 2208 HOH HOH A .
D 4 HOH 209 2209 2209 HOH HOH A .
#
_software.name REFMAC
_software.classification refinement
_software.version 5.2.0019
_software.citation_id ?
_software.pdbx_ordinal 1
#
_cell.entry_id 2J7M
_cell.length_a 77.315
_cell.length_b 77.315
_cell.length_c 74.162
_cell.angle_alpha 90.00
_cell.angle_beta 90.00
_cell.angle_gamma 90.00
_cell.Z_PDB 8
_cell.pdbx_unique_axis ?
#
_symmetry.entry_id 2J7M
_symmetry.space_group_name_H-M 'P 43 21 2'
_symmetry.pdbx_full_space_group_name_H-M ?
_symmetry.cell_setting ?
_symmetry.Int_Tables_number 96
#
_exptl.entry_id 2J7M
_exptl.method 'X-RAY DIFFRACTION'
_exptl.crystals_number ?
#
_exptl_crystal.id 1
_exptl_crystal.density_meas ?
_exptl_crystal.density_Matthews 2.93
_exptl_crystal.density_percent_sol 57.75
_exptl_crystal.description ?
#
_diffrn.id 1
_diffrn.ambient_temp 113.2
_diffrn.ambient_temp_details ?
_diffrn.crystal_id 1
#
_diffrn_radiation.diffrn_id 1
_diffrn_radiation.wavelength_id 1
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l M
_diffrn_radiation.monochromator ?
_diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH'
_diffrn_radiation.pdbx_scattering_type x-ray
#
_diffrn_radiation_wavelength.id 1
_diffrn_radiation_wavelength.wavelength 1.5418
_diffrn_radiation_wavelength.wt 1.0
#
_diffrn_source.diffrn_id 1
_diffrn_source.source 'ROTATING ANODE'
_diffrn_source.type ?
_diffrn_source.pdbx_synchrotron_site ?
_diffrn_source.pdbx_synchrotron_beamline ?
_diffrn_source.pdbx_wavelength 1.5418
_diffrn_source.pdbx_wavelength_list ?
#
_reflns.pdbx_diffrn_id 1
_reflns.pdbx_ordinal 1
_reflns.entry_id 2J7M
_reflns.observed_criterion_sigma_I 2.000
_reflns.observed_criterion_sigma_F ?
_reflns.d_resolution_low 20.000
_reflns.d_resolution_high 2.300
_reflns.number_obs 10441
_reflns.number_all ?
_reflns.percent_possible_obs 99.9
_reflns.pdbx_Rmerge_I_obs 0.12000
_reflns.pdbx_Rsym_value ?
_reflns.pdbx_netI_over_sigmaI 7.8000
_reflns.B_iso_Wilson_estimate ?
_reflns.pdbx_redundancy 4.870
#
_refine.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine.entry_id 2J7M
_refine.pdbx_diffrn_id 1
_refine.pdbx_TLS_residual_ADP_flag ?
_refine.ls_number_reflns_obs 9939
_refine.ls_number_reflns_all ?
_refine.pdbx_ls_sigma_I ?
_refine.pdbx_ls_sigma_F ?
_refine.pdbx_data_cutoff_high_absF ?
_refine.pdbx_data_cutoff_low_absF ?
_refine.pdbx_data_cutoff_high_rms_absF ?
_refine.ls_d_res_low 54.64
_refine.ls_d_res_high 2.30
_refine.ls_percent_reflns_obs 99.6
_refine.ls_R_factor_obs 0.191
_refine.ls_R_factor_all ?
_refine.ls_R_factor_R_work 0.188
_refine.ls_R_factor_R_free 0.251
_refine.ls_R_factor_R_free_error ?
_refine.ls_R_factor_R_free_error_details ?
_refine.ls_percent_reflns_R_free 4.800
_refine.ls_number_reflns_R_free 501
_refine.ls_number_parameters ?
_refine.ls_number_restraints ?
_refine.occupancy_min ?
_refine.occupancy_max ?
_refine.correlation_coeff_Fo_to_Fc 0.950
_refine.correlation_coeff_Fo_to_Fc_free 0.906
_refine.B_iso_mean 21.23
_refine.aniso_B[1][1] -0.42000
_refine.aniso_B[2][2] -0.42000
_refine.aniso_B[3][3] 0.85000
_refine.aniso_B[1][2] 0.00000
_refine.aniso_B[1][3] 0.00000
_refine.aniso_B[2][3] 0.00000
_refine.solvent_model_details MASK
_refine.solvent_model_param_ksol ?
_refine.solvent_model_param_bsol ?
_refine.pdbx_solvent_vdw_probe_radii 1.40
_refine.pdbx_solvent_ion_probe_radii 0.80
_refine.pdbx_solvent_shrinkage_radii 0.80
_refine.pdbx_ls_cross_valid_method THROUGHOUT
_refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.'
_refine.pdbx_starting_model ?
_refine.pdbx_method_to_determine_struct OTHER
_refine.pdbx_isotropic_thermal_model ?
_refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD'
_refine.pdbx_stereochem_target_val_spec_case ?
_refine.pdbx_R_Free_selection_details RANDOM
_refine.pdbx_overall_ESU_R 0.239
_refine.pdbx_overall_ESU_R_Free 0.216
_refine.overall_SU_ML 0.136
_refine.pdbx_overall_phase_error ?
_refine.overall_SU_B 5.550
_refine.overall_SU_R_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI ?
_refine.pdbx_overall_SU_R_Blow_DPI ?
_refine.pdbx_overall_SU_R_free_Blow_DPI ?
#
_refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_hist.cycle_id LAST
_refine_hist.pdbx_number_atoms_protein 1103
_refine_hist.pdbx_number_atoms_nucleic_acid 0
_refine_hist.pdbx_number_atoms_ligand 37
_refine_hist.number_atoms_solvent 209
_refine_hist.number_atoms_total 1349
_refine_hist.d_res_high 2.30
_refine_hist.d_res_low 54.64
#
loop_
_refine_ls_restr.type
_refine_ls_restr.dev_ideal
_refine_ls_restr.dev_ideal_target
_refine_ls_restr.weight
_refine_ls_restr.number
_refine_ls_restr.pdbx_refine_id
_refine_ls_restr.pdbx_restraint_function
r_bond_refined_d 0.015 0.021 ? 1164 'X-RAY DIFFRACTION' ?
r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ?
r_angle_refined_deg 1.635 1.962 ? 1583 'X-RAY DIFFRACTION' ?
r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ?
r_dihedral_angle_1_deg 6.958 5.000 ? 142 'X-RAY DIFFRACTION' ?
r_dihedral_angle_2_deg 37.750 25.179 ? 56 'X-RAY DIFFRACTION' ?
r_dihedral_angle_3_deg 15.559 15.000 ? 181 'X-RAY DIFFRACTION' ?
r_dihedral_angle_4_deg 25.157 15.000 ? 5 'X-RAY DIFFRACTION' ?
r_chiral_restr 0.097 0.200 ? 182 'X-RAY DIFFRACTION' ?
r_gen_planes_refined 0.006 0.020 ? 877 'X-RAY DIFFRACTION' ?
r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbd_refined 0.203 0.200 ? 461 'X-RAY DIFFRACTION' ?
r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_nbtor_refined 0.301 0.200 ? 780 'X-RAY DIFFRACTION' ?
r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_refined 0.188 0.200 ? 166 'X-RAY DIFFRACTION' ?
r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_refined 0.156 0.200 ? 20 'X-RAY DIFFRACTION' ?
r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_refined 0.499 0.200 ? 17 'X-RAY DIFFRACTION' ?
r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcbond_it 0.767 1.500 ? 722 'X-RAY DIFFRACTION' ?
r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_mcangle_it 1.366 2.000 ? 1141 'X-RAY DIFFRACTION' ?
r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_scbond_it 2.234 3.000 ? 487 'X-RAY DIFFRACTION' ?
r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_scangle_it 3.493 4.500 ? 442 'X-RAY DIFFRACTION' ?
r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ?
r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ?
r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ?
r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ?
r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ?
#
_refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION'
_refine_ls_shell.pdbx_total_number_of_bins_used 20
_refine_ls_shell.d_res_high 2.30
_refine_ls_shell.d_res_low 2.36
_refine_ls_shell.number_reflns_R_work 719
_refine_ls_shell.R_factor_R_work 0.2150
_refine_ls_shell.percent_reflns_obs ?
_refine_ls_shell.R_factor_R_free 0.2530
_refine_ls_shell.R_factor_R_free_error ?
_refine_ls_shell.percent_reflns_R_free ?
_refine_ls_shell.number_reflns_R_free 36
_refine_ls_shell.number_reflns_all ?
_refine_ls_shell.R_factor_all ?
#
_database_PDB_matrix.entry_id 2J7M
_database_PDB_matrix.origx[1][1] 1.000000
_database_PDB_matrix.origx[1][2] 0.000000
_database_PDB_matrix.origx[1][3] 0.000000
_database_PDB_matrix.origx[2][1] 0.000000
_database_PDB_matrix.origx[2][2] 1.000000
_database_PDB_matrix.origx[2][3] 0.000000
_database_PDB_matrix.origx[3][1] 0.000000
_database_PDB_matrix.origx[3][2] 0.000000
_database_PDB_matrix.origx[3][3] 1.000000
_database_PDB_matrix.origx_vector[1] 0.00000
_database_PDB_matrix.origx_vector[2] 0.00000
_database_PDB_matrix.origx_vector[3] 0.00000
#
_struct.entry_id 2J7M
_struct.title 'Characterization of a Family 32 CBM'
_struct.pdbx_model_details ?
_struct.pdbx_CASP_flag ?
_struct.pdbx_model_type_details ?
#
_struct_keywords.entry_id 2J7M
_struct_keywords.pdbx_keywords HYDROLASE
_struct_keywords.text 'GLYCOSIDE HYDROLASE, CARBOHYDRATE BINDING, CBM, HYDROLASE, H-TRISACCHARIDE'
#
loop_
_struct_asym.id
_struct_asym.pdbx_blank_PDB_chainid_flag
_struct_asym.pdbx_modified
_struct_asym.entity_id
_struct_asym.details
A N N 1 ?
B N N 2 ?
C N N 3 ?
D N N 4 ?
#
loop_
_struct_ref.id
_struct_ref.db_name
_struct_ref.db_code
_struct_ref.entity_id
_struct_ref.pdbx_seq_one_letter_code
_struct_ref.pdbx_align_begin
_struct_ref.pdbx_db_accession
_struct_ref.pdbx_db_isoform
1 PDB 2J7M 1 ? ? 2J7M ?
2 UNP Q8XL08_CLOPE 1 ? ? Q8XL08 ?
#
loop_
_struct_ref_seq.align_id
_struct_ref_seq.ref_id
_struct_ref_seq.pdbx_PDB_id_code
_struct_ref_seq.pdbx_strand_id
_struct_ref_seq.seq_align_beg
_struct_ref_seq.pdbx_seq_align_beg_ins_code
_struct_ref_seq.seq_align_end
_struct_ref_seq.pdbx_seq_align_end_ins_code
_struct_ref_seq.pdbx_db_accession
_struct_ref_seq.db_align_beg
_struct_ref_seq.pdbx_db_align_beg_ins_code
_struct_ref_seq.db_align_end
_struct_ref_seq.pdbx_db_align_end_ins_code
_struct_ref_seq.pdbx_auth_seq_align_beg
_struct_ref_seq.pdbx_auth_seq_align_end
1 1 2J7M A 1 ? 6 ? 2J7M 619 ? 624 ? 619 624
2 2 2J7M A 7 ? 149 ? Q8XL08 625 ? 767 ? 625 767
#
_pdbx_struct_assembly.id 1
_pdbx_struct_assembly.details author_and_software_defined_assembly
_pdbx_struct_assembly.method_details PQS
_pdbx_struct_assembly.oligomeric_details monomeric
_pdbx_struct_assembly.oligomeric_count 1
#
_pdbx_struct_assembly_gen.assembly_id 1
_pdbx_struct_assembly_gen.oper_expression 1
_pdbx_struct_assembly_gen.asym_id_list A,B,C,D
#
_pdbx_struct_oper_list.id 1
_pdbx_struct_oper_list.type 'identity operation'
_pdbx_struct_oper_list.name 1_555
_pdbx_struct_oper_list.symmetry_operation x,y,z
_pdbx_struct_oper_list.matrix[1][1] 1.0000000000
_pdbx_struct_oper_list.matrix[1][2] 0.0000000000
_pdbx_struct_oper_list.matrix[1][3] 0.0000000000
_pdbx_struct_oper_list.vector[1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][1] 0.0000000000
_pdbx_struct_oper_list.matrix[2][2] 1.0000000000
_pdbx_struct_oper_list.matrix[2][3] 0.0000000000
_pdbx_struct_oper_list.vector[2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][1] 0.0000000000
_pdbx_struct_oper_list.matrix[3][2] 0.0000000000
_pdbx_struct_oper_list.matrix[3][3] 1.0000000000
_pdbx_struct_oper_list.vector[3] 0.0000000000
#
_struct_biol.id 1
#
_struct_conf.conf_type_id HELX_P
_struct_conf.id HELX_P1
_struct_conf.pdbx_PDB_helix_id 1
_struct_conf.beg_label_comp_id PRO
_struct_conf.beg_label_asym_id A
_struct_conf.beg_label_seq_id 26
_struct_conf.pdbx_beg_PDB_ins_code ?
_struct_conf.end_label_comp_id ASP
_struct_conf.end_label_asym_id A
_struct_conf.end_label_seq_id 32
_struct_conf.pdbx_end_PDB_ins_code ?
_struct_conf.beg_auth_comp_id PRO
_struct_conf.beg_auth_asym_id A
_struct_conf.beg_auth_seq_id 644
_struct_conf.end_auth_comp_id ASP
_struct_conf.end_auth_asym_id A
_struct_conf.end_auth_seq_id 650
_struct_conf.pdbx_PDB_helix_class 5
_struct_conf.details ?
_struct_conf.pdbx_PDB_helix_length 7
#
_struct_conf_type.id HELX_P
_struct_conf_type.criteria ?
_struct_conf_type.reference ?
#
loop_
_struct_conn.id
_struct_conn.conn_type_id
_struct_conn.pdbx_leaving_atom_flag
_struct_conn.pdbx_PDB_id
_struct_conn.ptnr1_label_asym_id
_struct_conn.ptnr1_label_comp_id
_struct_conn.ptnr1_label_seq_id
_struct_conn.ptnr1_label_atom_id
_struct_conn.pdbx_ptnr1_label_alt_id
_struct_conn.pdbx_ptnr1_PDB_ins_code
_struct_conn.pdbx_ptnr1_standard_comp_id
_struct_conn.ptnr1_symmetry
_struct_conn.ptnr2_label_asym_id
_struct_conn.ptnr2_label_comp_id
_struct_conn.ptnr2_label_seq_id
_struct_conn.ptnr2_label_atom_id
_struct_conn.pdbx_ptnr2_label_alt_id
_struct_conn.pdbx_ptnr2_PDB_ins_code
_struct_conn.ptnr1_auth_asym_id
_struct_conn.ptnr1_auth_comp_id
_struct_conn.ptnr1_auth_seq_id
_struct_conn.ptnr2_auth_asym_id
_struct_conn.ptnr2_auth_comp_id
_struct_conn.ptnr2_auth_seq_id
_struct_conn.ptnr2_symmetry
_struct_conn.pdbx_ptnr3_label_atom_id
_struct_conn.pdbx_ptnr3_label_seq_id
_struct_conn.pdbx_ptnr3_label_comp_id
_struct_conn.pdbx_ptnr3_label_asym_id
_struct_conn.pdbx_ptnr3_label_alt_id
_struct_conn.pdbx_ptnr3_PDB_ins_code
_struct_conn.details
_struct_conn.pdbx_dist_value
_struct_conn.pdbx_value_order
_struct_conn.pdbx_role
covale1 covale both ? B NDG . O4 ? ? ? 1_555 B GAL . C1 ? ? B NDG 1 B GAL 2 1_555 ? ? ? ? ? ? ? 1.444 ? ?
covale2 covale both ? B GAL . O2 ? ? ? 1_555 B FUC . C1 ? ? B GAL 2 B FUC 3 1_555 ? ? ? ? ? ? ? 1.464 ? ?
metalc1 metalc ? ? A PHE 29 O ? ? ? 1_555 C CA . CA ? ? A PHE 647 A CA 1768 1_555 ? ? ? ? ? ? ? 2.516 ? ?
metalc2 metalc ? ? A ASP 32 OD2 ? ? ? 1_555 C CA . CA ? ? A ASP 650 A CA 1768 1_555 ? ? ? ? ? ? ? 2.933 ? ?
metalc3 metalc ? ? A ASP 32 O ? ? ? 1_555 C CA . CA ? ? A ASP 650 A CA 1768 1_555 ? ? ? ? ? ? ? 3.391 ? ?
metalc4 metalc ? ? A ASP 34 O ? ? ? 1_555 C CA . CA ? ? A ASP 652 A CA 1768 1_555 ? ? ? ? ? ? ? 2.572 ? ?
metalc5 metalc ? ? A THR 37 OG1 ? ? ? 1_555 C CA . CA ? ? A THR 655 A CA 1768 1_555 ? ? ? ? ? ? ? 2.854 ? ?
metalc6 metalc ? ? A THR 37 O ? ? ? 1_555 C CA . CA ? ? A THR 655 A CA 1768 1_555 ? ? ? ? ? ? ? 2.832 ? ?
metalc7 metalc ? ? A ALA 143 O ? ? ? 1_555 C CA . CA ? ? A ALA 761 A CA 1768 1_555 ? ? ? ? ? ? ? 2.624 ? ?
#
loop_
_struct_conn_type.id
_struct_conn_type.criteria
_struct_conn_type.reference
covale ? ?
metalc ? ?
#
loop_
_pdbx_struct_conn_angle.id
_pdbx_struct_conn_angle.ptnr1_label_atom_id
_pdbx_struct_conn_angle.ptnr1_label_alt_id
_pdbx_struct_conn_angle.ptnr1_label_asym_id
_pdbx_struct_conn_angle.ptnr1_label_comp_id
_pdbx_struct_conn_angle.ptnr1_label_seq_id
_pdbx_struct_conn_angle.ptnr1_auth_atom_id
_pdbx_struct_conn_angle.ptnr1_auth_asym_id
_pdbx_struct_conn_angle.ptnr1_auth_comp_id
_pdbx_struct_conn_angle.ptnr1_auth_seq_id
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code
_pdbx_struct_conn_angle.ptnr1_symmetry
_pdbx_struct_conn_angle.ptnr2_label_atom_id
_pdbx_struct_conn_angle.ptnr2_label_alt_id
_pdbx_struct_conn_angle.ptnr2_label_asym_id
_pdbx_struct_conn_angle.ptnr2_label_comp_id
_pdbx_struct_conn_angle.ptnr2_label_seq_id
_pdbx_struct_conn_angle.ptnr2_auth_atom_id
_pdbx_struct_conn_angle.ptnr2_auth_asym_id
_pdbx_struct_conn_angle.ptnr2_auth_comp_id
_pdbx_struct_conn_angle.ptnr2_auth_seq_id
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code
_pdbx_struct_conn_angle.ptnr2_symmetry
_pdbx_struct_conn_angle.ptnr3_label_atom_id
_pdbx_struct_conn_angle.ptnr3_label_alt_id
_pdbx_struct_conn_angle.ptnr3_label_asym_id
_pdbx_struct_conn_angle.ptnr3_label_comp_id
_pdbx_struct_conn_angle.ptnr3_label_seq_id
_pdbx_struct_conn_angle.ptnr3_auth_atom_id
_pdbx_struct_conn_angle.ptnr3_auth_asym_id
_pdbx_struct_conn_angle.ptnr3_auth_comp_id
_pdbx_struct_conn_angle.ptnr3_auth_seq_id
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code
_pdbx_struct_conn_angle.ptnr3_symmetry
_pdbx_struct_conn_angle.value
_pdbx_struct_conn_angle.value_esd
1 O ? A PHE 29 ? A PHE 647 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 OD2 ? A ASP 32 ? A ASP 650 ? 1_555 87.0 ?
2 O ? A PHE 29 ? A PHE 647 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A ASP 32 ? A ASP 650 ? 1_555 89.0 ?
3 OD2 ? A ASP 32 ? A ASP 650 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A ASP 32 ? A ASP 650 ? 1_555 63.6 ?
4 O ? A PHE 29 ? A PHE 647 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A ASP 34 ? A ASP 652 ? 1_555 171.6 ?
5 OD2 ? A ASP 32 ? A ASP 650 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A ASP 34 ? A ASP 652 ? 1_555 92.4 ?
6 O ? A ASP 32 ? A ASP 650 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A ASP 34 ? A ASP 652 ? 1_555 98.2 ?
7 O ? A PHE 29 ? A PHE 647 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 OG1 ? A THR 37 ? A THR 655 ? 1_555 92.2 ?
8 OD2 ? A ASP 32 ? A ASP 650 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 OG1 ? A THR 37 ? A THR 655 ? 1_555 77.8 ?
9 O ? A ASP 32 ? A ASP 650 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 OG1 ? A THR 37 ? A THR 655 ? 1_555 141.3 ?
10 O ? A ASP 34 ? A ASP 652 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 OG1 ? A THR 37 ? A THR 655 ? 1_555 79.5 ?
11 O ? A PHE 29 ? A PHE 647 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A THR 37 ? A THR 655 ? 1_555 101.5 ?
12 OD2 ? A ASP 32 ? A ASP 650 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A THR 37 ? A THR 655 ? 1_555 145.9 ?
13 O ? A ASP 32 ? A ASP 650 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A THR 37 ? A THR 655 ? 1_555 148.2 ?
14 O ? A ASP 34 ? A ASP 652 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A THR 37 ? A THR 655 ? 1_555 74.5 ?
15 OG1 ? A THR 37 ? A THR 655 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A THR 37 ? A THR 655 ? 1_555 69.0 ?
16 O ? A PHE 29 ? A PHE 647 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A ALA 143 ? A ALA 761 ? 1_555 78.5 ?
17 OD2 ? A ASP 32 ? A ASP 650 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A ALA 143 ? A ALA 761 ? 1_555 135.8 ?
18 O ? A ASP 32 ? A ASP 650 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A ALA 143 ? A ALA 761 ? 1_555 74.5 ?
19 O ? A ASP 34 ? A ASP 652 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A ALA 143 ? A ALA 761 ? 1_555 107.4 ?
20 OG1 ? A THR 37 ? A THR 655 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A ALA 143 ? A ALA 761 ? 1_555 143.4 ?
21 O ? A THR 37 ? A THR 655 ? 1_555 CA ? C CA . ? A CA 1768 ? 1_555 O ? A ALA 143 ? A ALA 761 ? 1_555 78.2 ?
#
loop_
_struct_mon_prot_cis.pdbx_id
_struct_mon_prot_cis.label_comp_id
_struct_mon_prot_cis.label_seq_id
_struct_mon_prot_cis.label_asym_id
_struct_mon_prot_cis.label_alt_id
_struct_mon_prot_cis.pdbx_PDB_ins_code
_struct_mon_prot_cis.auth_comp_id
_struct_mon_prot_cis.auth_seq_id
_struct_mon_prot_cis.auth_asym_id
_struct_mon_prot_cis.pdbx_label_comp_id_2
_struct_mon_prot_cis.pdbx_label_seq_id_2
_struct_mon_prot_cis.pdbx_label_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_ins_code_2
_struct_mon_prot_cis.pdbx_auth_comp_id_2
_struct_mon_prot_cis.pdbx_auth_seq_id_2
_struct_mon_prot_cis.pdbx_auth_asym_id_2
_struct_mon_prot_cis.pdbx_PDB_model_num
_struct_mon_prot_cis.pdbx_omega_angle
1 SER 45 A . ? SER 663 A PRO 46 A ? PRO 664 A 1 -7.40
2 GLY 50 A . ? GLY 668 A PRO 51 A ? PRO 669 A 1 0.21
#
loop_
_struct_sheet.id
_struct_sheet.type
_struct_sheet.number_strands
_struct_sheet.details
AA ? 5 ?
AB ? 3 ?
AC ? 2 ?
#
loop_
_struct_sheet_order.sheet_id
_struct_sheet_order.range_id_1
_struct_sheet_order.range_id_2
_struct_sheet_order.offset
_struct_sheet_order.sense
AA 1 2 ? anti-parallel
AA 2 3 ? anti-parallel
AA 3 4 ? anti-parallel
AA 4 5 ? anti-parallel
AB 1 2 ? anti-parallel
AB 2 3 ? anti-parallel
AC 1 2 ? anti-parallel
#
loop_
_struct_sheet_range.sheet_id
_struct_sheet_range.id
_struct_sheet_range.beg_label_comp_id
_struct_sheet_range.beg_label_asym_id
_struct_sheet_range.beg_label_seq_id
_struct_sheet_range.pdbx_beg_PDB_ins_code
_struct_sheet_range.end_label_comp_id
_struct_sheet_range.end_label_asym_id
_struct_sheet_range.end_label_seq_id
_struct_sheet_range.pdbx_end_PDB_ins_code
_struct_sheet_range.beg_auth_comp_id
_struct_sheet_range.beg_auth_asym_id
_struct_sheet_range.beg_auth_seq_id
_struct_sheet_range.end_auth_comp_id
_struct_sheet_range.end_auth_asym_id
_struct_sheet_range.end_auth_seq_id
AA 1 THR A 10 ? ALA A 15 ? THR A 628 ALA A 633
AA 2 HIS A 52 ? ALA A 70 ? HIS A 670 ALA A 688
AA 3 LYS A 109 ? SER A 128 ? LYS A 727 SER A 746
AA 4 ILE A 80 ? SER A 88 ? ILE A 698 SER A 706
AA 5 PHE A 94 ? THR A 101 ? PHE A 712 THR A 719
AB 1 THR A 10 ? ALA A 15 ? THR A 628 ALA A 633
AB 2 HIS A 52 ? ALA A 70 ? HIS A 670 ALA A 688
AB 3 GLU A 144 ? HIS A 148 ? GLU A 762 HIS A 766
AC 1 TRP A 39 ? HIS A 40 ? TRP A 657 HIS A 658
AC 2 THR A 141 ? ALA A 142 ? THR A 759 ALA A 760
#
loop_
_pdbx_struct_sheet_hbond.sheet_id
_pdbx_struct_sheet_hbond.range_id_1
_pdbx_struct_sheet_hbond.range_id_2
_pdbx_struct_sheet_hbond.range_1_label_atom_id
_pdbx_struct_sheet_hbond.range_1_label_comp_id
_pdbx_struct_sheet_hbond.range_1_label_asym_id
_pdbx_struct_sheet_hbond.range_1_label_seq_id
_pdbx_struct_sheet_hbond.range_1_PDB_ins_code
_pdbx_struct_sheet_hbond.range_1_auth_atom_id
_pdbx_struct_sheet_hbond.range_1_auth_comp_id
_pdbx_struct_sheet_hbond.range_1_auth_asym_id
_pdbx_struct_sheet_hbond.range_1_auth_seq_id
_pdbx_struct_sheet_hbond.range_2_label_atom_id
_pdbx_struct_sheet_hbond.range_2_label_comp_id
_pdbx_struct_sheet_hbond.range_2_label_asym_id
_pdbx_struct_sheet_hbond.range_2_label_seq_id
_pdbx_struct_sheet_hbond.range_2_PDB_ins_code
_pdbx_struct_sheet_hbond.range_2_auth_atom_id
_pdbx_struct_sheet_hbond.range_2_auth_comp_id
_pdbx_struct_sheet_hbond.range_2_auth_asym_id
_pdbx_struct_sheet_hbond.range_2_auth_seq_id
AA 1 2 N THR A 14 ? N THR A 632 O THR A 55 ? O THR A 673
AA 2 3 N TYR A 69 ? N TYR A 687 O LYS A 109 ? O LYS A 727
AA 3 4 O ASP A 127 ? O ASP A 745 N THR A 81 ? N THR A 699
AA 4 5 N VAL A 87 ? N VAL A 705 O THR A 95 ? O THR A 713
AB 1 2 N THR A 14 ? N THR A 632 O THR A 55 ? O THR A 673
AB 2 3 N ALA A 70 ? N ALA A 688 O GLU A 144 ? O GLU A 762
AC 1 2 N TRP A 39 ? N TRP A 657 O ALA A 142 ? O ALA A 760
#
loop_
_pdbx_validate_close_contact.id
_pdbx_validate_close_contact.PDB_model_num
_pdbx_validate_close_contact.auth_atom_id_1
_pdbx_validate_close_contact.auth_asym_id_1
_pdbx_validate_close_contact.auth_comp_id_1
_pdbx_validate_close_contact.auth_seq_id_1
_pdbx_validate_close_contact.PDB_ins_code_1
_pdbx_validate_close_contact.label_alt_id_1
_pdbx_validate_close_contact.auth_atom_id_2
_pdbx_validate_close_contact.auth_asym_id_2
_pdbx_validate_close_contact.auth_comp_id_2
_pdbx_validate_close_contact.auth_seq_id_2
_pdbx_validate_close_contact.PDB_ins_code_2
_pdbx_validate_close_contact.label_alt_id_2
_pdbx_validate_close_contact.dist
1 1 O A HOH 2015 ? ? O A HOH 2118 ? ? 1.87
2 1 CD2 A HIS 671 ? ? O A HOH 2094 ? ? 2.06
3 1 O A HOH 2105 ? ? O A HOH 2156 ? ? 2.15
#
_pdbx_validate_symm_contact.id 1
_pdbx_validate_symm_contact.PDB_model_num 1
_pdbx_validate_symm_contact.auth_atom_id_1 O
_pdbx_validate_symm_contact.auth_asym_id_1 A
_pdbx_validate_symm_contact.auth_comp_id_1 HOH
_pdbx_validate_symm_contact.auth_seq_id_1 2072
_pdbx_validate_symm_contact.PDB_ins_code_1 ?
_pdbx_validate_symm_contact.label_alt_id_1 ?
_pdbx_validate_symm_contact.site_symmetry_1 1_555
_pdbx_validate_symm_contact.auth_atom_id_2 O
_pdbx_validate_symm_contact.auth_asym_id_2 A
_pdbx_validate_symm_contact.auth_comp_id_2 HOH
_pdbx_validate_symm_contact.auth_seq_id_2 2072
_pdbx_validate_symm_contact.PDB_ins_code_2 ?
_pdbx_validate_symm_contact.label_alt_id_2 ?
_pdbx_validate_symm_contact.site_symmetry_2 8_665
_pdbx_validate_symm_contact.dist 0.83
#
loop_
_pdbx_validate_rmsd_angle.id
_pdbx_validate_rmsd_angle.PDB_model_num
_pdbx_validate_rmsd_angle.auth_atom_id_1
_pdbx_validate_rmsd_angle.auth_asym_id_1
_pdbx_validate_rmsd_angle.auth_comp_id_1
_pdbx_validate_rmsd_angle.auth_seq_id_1
_pdbx_validate_rmsd_angle.PDB_ins_code_1
_pdbx_validate_rmsd_angle.label_alt_id_1
_pdbx_validate_rmsd_angle.auth_atom_id_2
_pdbx_validate_rmsd_angle.auth_asym_id_2
_pdbx_validate_rmsd_angle.auth_comp_id_2
_pdbx_validate_rmsd_angle.auth_seq_id_2
_pdbx_validate_rmsd_angle.PDB_ins_code_2
_pdbx_validate_rmsd_angle.label_alt_id_2
_pdbx_validate_rmsd_angle.auth_atom_id_3
_pdbx_validate_rmsd_angle.auth_asym_id_3
_pdbx_validate_rmsd_angle.auth_comp_id_3
_pdbx_validate_rmsd_angle.auth_seq_id_3
_pdbx_validate_rmsd_angle.PDB_ins_code_3
_pdbx_validate_rmsd_angle.label_alt_id_3
_pdbx_validate_rmsd_angle.angle_value
_pdbx_validate_rmsd_angle.angle_target_value
_pdbx_validate_rmsd_angle.angle_deviation
_pdbx_validate_rmsd_angle.angle_standard_deviation
_pdbx_validate_rmsd_angle.linker_flag
1 1 NE A ARG 754 ? ? CZ A ARG 754 ? ? NH1 A ARG 754 ? ? 115.81 120.30 -4.49 0.50 N
2 1 NE A ARG 754 ? ? CZ A ARG 754 ? ? NH2 A ARG 754 ? ? 125.55 120.30 5.25 0.50 N
#
_pdbx_validate_torsion.id 1
_pdbx_validate_torsion.PDB_model_num 1
_pdbx_validate_torsion.auth_comp_id SER
_pdbx_validate_torsion.auth_asym_id A
_pdbx_validate_torsion.auth_seq_id 659
_pdbx_validate_torsion.PDB_ins_code ?
_pdbx_validate_torsion.label_alt_id ?
_pdbx_validate_torsion.phi -49.35
_pdbx_validate_torsion.psi 156.63
#
_pdbx_molecule_features.prd_id PRD_900125
_pdbx_molecule_features.name 'H type 2 antigen, alpha anomer'
_pdbx_molecule_features.type Oligosaccharide
_pdbx_molecule_features.class Antigen
_pdbx_molecule_features.details oligosaccharide
#
_pdbx_molecule.instance_id 1
_pdbx_molecule.prd_id PRD_900125
_pdbx_molecule.asym_id B
#
_pdbx_struct_special_symmetry.id 1
_pdbx_struct_special_symmetry.PDB_model_num 1
_pdbx_struct_special_symmetry.auth_asym_id A
_pdbx_struct_special_symmetry.auth_comp_id HOH
_pdbx_struct_special_symmetry.auth_seq_id 2070
_pdbx_struct_special_symmetry.PDB_ins_code ?
_pdbx_struct_special_symmetry.label_asym_id D
_pdbx_struct_special_symmetry.label_comp_id HOH
_pdbx_struct_special_symmetry.label_seq_id .
#
_pdbx_database_remark.id 700
_pdbx_database_remark.text
;
SHEET
THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN
ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW,
TWO SHEETS ARE DEFINED.
;
#
loop_
_pdbx_distant_solvent_atoms.id
_pdbx_distant_solvent_atoms.PDB_model_num
_pdbx_distant_solvent_atoms.auth_atom_id
_pdbx_distant_solvent_atoms.label_alt_id
_pdbx_distant_solvent_atoms.auth_asym_id
_pdbx_distant_solvent_atoms.auth_comp_id
_pdbx_distant_solvent_atoms.auth_seq_id
_pdbx_distant_solvent_atoms.PDB_ins_code
_pdbx_distant_solvent_atoms.neighbor_macromolecule_distance
_pdbx_distant_solvent_atoms.neighbor_ligand_distance
1 1 O ? A HOH 2031 ? 7.02 .
2 1 O ? A HOH 2033 ? . 7.21
#
loop_
_pdbx_unobs_or_zero_occ_residues.id
_pdbx_unobs_or_zero_occ_residues.PDB_model_num
_pdbx_unobs_or_zero_occ_residues.polymer_flag
_pdbx_unobs_or_zero_occ_residues.occupancy_flag
_pdbx_unobs_or_zero_occ_residues.auth_asym_id
_pdbx_unobs_or_zero_occ_residues.auth_comp_id
_pdbx_unobs_or_zero_occ_residues.auth_seq_id
_pdbx_unobs_or_zero_occ_residues.PDB_ins_code
_pdbx_unobs_or_zero_occ_residues.label_asym_id
_pdbx_unobs_or_zero_occ_residues.label_comp_id
_pdbx_unobs_or_zero_occ_residues.label_seq_id
1 1 Y 1 A GLY 619 ? A GLY 1
2 1 Y 1 A ILE 620 ? A ILE 2
3 1 Y 1 A ASP 621 ? A ASP 3
4 1 Y 1 A PRO 622 ? A PRO 4
5 1 Y 1 A PHE 623 ? A PHE 5
6 1 Y 1 A THR 624 ? A THR 6
#
loop_
_chem_comp_atom.comp_id
_chem_comp_atom.atom_id
_chem_comp_atom.type_symbol
_chem_comp_atom.pdbx_aromatic_flag
_chem_comp_atom.pdbx_stereo_config
_chem_comp_atom.pdbx_ordinal
ALA N N N N 1
ALA CA C N S 2
ALA C C N N 3
ALA O O N N 4
ALA CB C N N 5
ALA OXT O N N 6
ALA H H N N 7
ALA H2 H N N 8
ALA HA H N N 9
ALA HB1 H N N 10
ALA HB2 H N N 11
ALA HB3 H N N 12
ALA HXT H N N 13
ARG N N N N 14
ARG CA C N S 15
ARG C C N N 16
ARG O O N N 17
ARG CB C N N 18
ARG CG C N N 19
ARG CD C N N 20
ARG NE N N N 21
ARG CZ C N N 22
ARG NH1 N N N 23
ARG NH2 N N N 24
ARG OXT O N N 25
ARG H H N N 26
ARG H2 H N N 27
ARG HA H N N 28
ARG HB2 H N N 29
ARG HB3 H N N 30
ARG HG2 H N N 31
ARG HG3 H N N 32
ARG HD2 H N N 33
ARG HD3 H N N 34
ARG HE H N N 35
ARG HH11 H N N 36
ARG HH12 H N N 37
ARG HH21 H N N 38
ARG HH22 H N N 39
ARG HXT H N N 40
ASN N N N N 41
ASN CA C N S 42
ASN C C N N 43
ASN O O N N 44
ASN CB C N N 45
ASN CG C N N 46
ASN OD1 O N N 47
ASN ND2 N N N 48
ASN OXT O N N 49
ASN H H N N 50
ASN H2 H N N 51
ASN HA H N N 52
ASN HB2 H N N 53
ASN HB3 H N N 54
ASN HD21 H N N 55
ASN HD22 H N N 56
ASN HXT H N N 57
ASP N N N N 58
ASP CA C N S 59
ASP C C N N 60
ASP O O N N 61
ASP CB C N N 62
ASP CG C N N 63
ASP OD1 O N N 64
ASP OD2 O N N 65
ASP OXT O N N 66
ASP H H N N 67
ASP H2 H N N 68
ASP HA H N N 69
ASP HB2 H N N 70
ASP HB3 H N N 71
ASP HD2 H N N 72
ASP HXT H N N 73
CA CA CA N N 74
FUC C1 C N R 75
FUC C2 C N S 76
FUC C3 C N R 77
FUC C4 C N S 78
FUC C5 C N S 79
FUC C6 C N N 80
FUC O1 O N N 81
FUC O2 O N N 82
FUC O3 O N N 83
FUC O4 O N N 84
FUC O5 O N N 85
FUC H1 H N N 86
FUC H2 H N N 87
FUC H3 H N N 88
FUC H4 H N N 89
FUC H5 H N N 90
FUC H61 H N N 91
FUC H62 H N N 92
FUC H63 H N N 93
FUC HO1 H N N 94
FUC HO2 H N N 95
FUC HO3 H N N 96
FUC HO4 H N N 97
GAL C1 C N R 98
GAL C2 C N R 99
GAL C3 C N S 100
GAL C4 C N R 101
GAL C5 C N R 102
GAL C6 C N N 103
GAL O1 O N N 104
GAL O2 O N N 105
GAL O3 O N N 106
GAL O4 O N N 107
GAL O5 O N N 108
GAL O6 O N N 109
GAL H1 H N N 110
GAL H2 H N N 111
GAL H3 H N N 112
GAL H4 H N N 113
GAL H5 H N N 114
GAL H61 H N N 115
GAL H62 H N N 116
GAL HO1 H N N 117
GAL HO2 H N N 118
GAL HO3 H N N 119
GAL HO4 H N N 120
GAL HO6 H N N 121
GLN N N N N 122
GLN CA C N S 123
GLN C C N N 124
GLN O O N N 125
GLN CB C N N 126
GLN CG C N N 127
GLN CD C N N 128
GLN OE1 O N N 129
GLN NE2 N N N 130
GLN OXT O N N 131
GLN H H N N 132
GLN H2 H N N 133
GLN HA H N N 134
GLN HB2 H N N 135
GLN HB3 H N N 136
GLN HG2 H N N 137
GLN HG3 H N N 138
GLN HE21 H N N 139
GLN HE22 H N N 140
GLN HXT H N N 141
GLU N N N N 142
GLU CA C N S 143
GLU C C N N 144
GLU O O N N 145
GLU CB C N N 146
GLU CG C N N 147
GLU CD C N N 148
GLU OE1 O N N 149
GLU OE2 O N N 150
GLU OXT O N N 151
GLU H H N N 152
GLU H2 H N N 153
GLU HA H N N 154
GLU HB2 H N N 155
GLU HB3 H N N 156
GLU HG2 H N N 157
GLU HG3 H N N 158
GLU HE2 H N N 159
GLU HXT H N N 160
GLY N N N N 161
GLY CA C N N 162
GLY C C N N 163
GLY O O N N 164
GLY OXT O N N 165
GLY H H N N 166
GLY H2 H N N 167
GLY HA2 H N N 168
GLY HA3 H N N 169
GLY HXT H N N 170
HIS N N N N 171
HIS CA C N S 172
HIS C C N N 173
HIS O O N N 174
HIS CB C N N 175
HIS CG C Y N 176
HIS ND1 N Y N 177
HIS CD2 C Y N 178
HIS CE1 C Y N 179
HIS NE2 N Y N 180
HIS OXT O N N 181
HIS H H N N 182
HIS H2 H N N 183
HIS HA H N N 184
HIS HB2 H N N 185
HIS HB3 H N N 186
HIS HD1 H N N 187
HIS HD2 H N N 188
HIS HE1 H N N 189
HIS HE2 H N N 190
HIS HXT H N N 191
HOH O O N N 192
HOH H1 H N N 193
HOH H2 H N N 194
ILE N N N N 195
ILE CA C N S 196
ILE C C N N 197
ILE O O N N 198
ILE CB C N S 199
ILE CG1 C N N 200
ILE CG2 C N N 201
ILE CD1 C N N 202
ILE OXT O N N 203
ILE H H N N 204
ILE H2 H N N 205
ILE HA H N N 206
ILE HB H N N 207
ILE HG12 H N N 208
ILE HG13 H N N 209
ILE HG21 H N N 210
ILE HG22 H N N 211
ILE HG23 H N N 212
ILE HD11 H N N 213
ILE HD12 H N N 214
ILE HD13 H N N 215
ILE HXT H N N 216
LEU N N N N 217
LEU CA C N S 218
LEU C C N N 219
LEU O O N N 220
LEU CB C N N 221
LEU CG C N N 222
LEU CD1 C N N 223
LEU CD2 C N N 224
LEU OXT O N N 225
LEU H H N N 226
LEU H2 H N N 227
LEU HA H N N 228
LEU HB2 H N N 229
LEU HB3 H N N 230
LEU HG H N N 231
LEU HD11 H N N 232
LEU HD12 H N N 233
LEU HD13 H N N 234
LEU HD21 H N N 235
LEU HD22 H N N 236
LEU HD23 H N N 237
LEU HXT H N N 238
LYS N N N N 239
LYS CA C N S 240
LYS C C N N 241
LYS O O N N 242
LYS CB C N N 243
LYS CG C N N 244
LYS CD C N N 245
LYS CE C N N 246
LYS NZ N N N 247
LYS OXT O N N 248
LYS H H N N 249
LYS H2 H N N 250
LYS HA H N N 251
LYS HB2 H N N 252
LYS HB3 H N N 253
LYS HG2 H N N 254
LYS HG3 H N N 255
LYS HD2 H N N 256
LYS HD3 H N N 257
LYS HE2 H N N 258
LYS HE3 H N N 259
LYS HZ1 H N N 260
LYS HZ2 H N N 261
LYS HZ3 H N N 262
LYS HXT H N N 263
MET N N N N 264
MET CA C N S 265
MET C C N N 266
MET O O N N 267
MET CB C N N 268
MET CG C N N 269
MET SD S N N 270
MET CE C N N 271
MET OXT O N N 272
MET H H N N 273
MET H2 H N N 274
MET HA H N N 275
MET HB2 H N N 276
MET HB3 H N N 277
MET HG2 H N N 278
MET HG3 H N N 279
MET HE1 H N N 280
MET HE2 H N N 281
MET HE3 H N N 282
MET HXT H N N 283
NDG C1 C N S 284
NDG C2 C N R 285
NDG C3 C N R 286
NDG C4 C N S 287
NDG C5 C N R 288
NDG C6 C N N 289
NDG C7 C N N 290
NDG C8 C N N 291
NDG O5 O N N 292
NDG O3 O N N 293
NDG O4 O N N 294
NDG O6 O N N 295
NDG O7 O N N 296
NDG N2 N N N 297
NDG O1 O N N 298
NDG H1 H N N 299
NDG H2 H N N 300
NDG H3 H N N 301
NDG H4 H N N 302
NDG H5 H N N 303
NDG H61 H N N 304
NDG H62 H N N 305
NDG H81 H N N 306
NDG H82 H N N 307
NDG H83 H N N 308
NDG HO3 H N N 309
NDG HO4 H N N 310
NDG HO6 H N N 311
NDG HN2 H N N 312
NDG HO1 H N N 313
PHE N N N N 314
PHE CA C N S 315
PHE C C N N 316
PHE O O N N 317
PHE CB C N N 318
PHE CG C Y N 319
PHE CD1 C Y N 320
PHE CD2 C Y N 321
PHE CE1 C Y N 322
PHE CE2 C Y N 323
PHE CZ C Y N 324
PHE OXT O N N 325
PHE H H N N 326
PHE H2 H N N 327
PHE HA H N N 328
PHE HB2 H N N 329
PHE HB3 H N N 330
PHE HD1 H N N 331
PHE HD2 H N N 332
PHE HE1 H N N 333
PHE HE2 H N N 334
PHE HZ H N N 335
PHE HXT H N N 336
PRO N N N N 337
PRO CA C N S 338
PRO C C N N 339
PRO O O N N 340
PRO CB C N N 341
PRO CG C N N 342
PRO CD C N N 343
PRO OXT O N N 344
PRO H H N N 345
PRO HA H N N 346
PRO HB2 H N N 347
PRO HB3 H N N 348
PRO HG2 H N N 349
PRO HG3 H N N 350
PRO HD2 H N N 351
PRO HD3 H N N 352
PRO HXT H N N 353
SER N N N N 354
SER CA C N S 355
SER C C N N 356
SER O O N N 357
SER CB C N N 358
SER OG O N N 359
SER OXT O N N 360
SER H H N N 361
SER H2 H N N 362
SER HA H N N 363
SER HB2 H N N 364
SER HB3 H N N 365
SER HG H N N 366
SER HXT H N N 367
THR N N N N 368
THR CA C N S 369
THR C C N N 370
THR O O N N 371
THR CB C N R 372
THR OG1 O N N 373
THR CG2 C N N 374
THR OXT O N N 375
THR H H N N 376
THR H2 H N N 377
THR HA H N N 378
THR HB H N N 379
THR HG1 H N N 380
THR HG21 H N N 381
THR HG22 H N N 382
THR HG23 H N N 383
THR HXT H N N 384
TRP N N N N 385
TRP CA C N S 386
TRP C C N N 387
TRP O O N N 388
TRP CB C N N 389
TRP CG C Y N 390
TRP CD1 C Y N 391
TRP CD2 C Y N 392
TRP NE1 N Y N 393
TRP CE2 C Y N 394
TRP CE3 C Y N 395
TRP CZ2 C Y N 396
TRP CZ3 C Y N 397
TRP CH2 C Y N 398
TRP OXT O N N 399
TRP H H N N 400
TRP H2 H N N 401
TRP HA H N N 402
TRP HB2 H N N 403
TRP HB3 H N N 404
TRP HD1 H N N 405
TRP HE1 H N N 406
TRP HE3 H N N 407
TRP HZ2 H N N 408
TRP HZ3 H N N 409
TRP HH2 H N N 410
TRP HXT H N N 411
TYR N N N N 412
TYR CA C N S 413
TYR C C N N 414
TYR O O N N 415
TYR CB C N N 416
TYR CG C Y N 417
TYR CD1 C Y N 418
TYR CD2 C Y N 419
TYR CE1 C Y N 420
TYR CE2 C Y N 421
TYR CZ C Y N 422
TYR OH O N N 423
TYR OXT O N N 424
TYR H H N N 425
TYR H2 H N N 426
TYR HA H N N 427
TYR HB2 H N N 428
TYR HB3 H N N 429
TYR HD1 H N N 430
TYR HD2 H N N 431
TYR HE1 H N N 432
TYR HE2 H N N 433
TYR HH H N N 434
TYR HXT H N N 435
VAL N N N N 436
VAL CA C N S 437
VAL C C N N 438
VAL O O N N 439
VAL CB C N N 440
VAL CG1 C N N 441
VAL CG2 C N N 442
VAL OXT O N N 443
VAL H H N N 444
VAL H2 H N N 445
VAL HA H N N 446
VAL HB H N N 447
VAL HG11 H N N 448
VAL HG12 H N N 449
VAL HG13 H N N 450
VAL HG21 H N N 451
VAL HG22 H N N 452
VAL HG23 H N N 453
VAL HXT H N N 454
#
loop_
_chem_comp_bond.comp_id
_chem_comp_bond.atom_id_1
_chem_comp_bond.atom_id_2
_chem_comp_bond.value_order
_chem_comp_bond.pdbx_aromatic_flag
_chem_comp_bond.pdbx_stereo_config
_chem_comp_bond.pdbx_ordinal
ALA N CA sing N N 1
ALA N H sing N N 2
ALA N H2 sing N N 3
ALA CA C sing N N 4
ALA CA CB sing N N 5
ALA CA HA sing N N 6
ALA C O doub N N 7
ALA C OXT sing N N 8
ALA CB HB1 sing N N 9
ALA CB HB2 sing N N 10
ALA CB HB3 sing N N 11
ALA OXT HXT sing N N 12
ARG N CA sing N N 13
ARG N H sing N N 14
ARG N H2 sing N N 15
ARG CA C sing N N 16
ARG CA CB sing N N 17
ARG CA HA sing N N 18
ARG C O doub N N 19
ARG C OXT sing N N 20
ARG CB CG sing N N 21
ARG CB HB2 sing N N 22
ARG CB HB3 sing N N 23
ARG CG CD sing N N 24
ARG CG HG2 sing N N 25
ARG CG HG3 sing N N 26
ARG CD NE sing N N 27
ARG CD HD2 sing N N 28
ARG CD HD3 sing N N 29
ARG NE CZ sing N N 30
ARG NE HE sing N N 31
ARG CZ NH1 sing N N 32
ARG CZ NH2 doub N N 33
ARG NH1 HH11 sing N N 34
ARG NH1 HH12 sing N N 35
ARG NH2 HH21 sing N N 36
ARG NH2 HH22 sing N N 37
ARG OXT HXT sing N N 38
ASN N CA sing N N 39
ASN N H sing N N 40
ASN N H2 sing N N 41
ASN CA C sing N N 42
ASN CA CB sing N N 43
ASN CA HA sing N N 44
ASN C O doub N N 45
ASN C OXT sing N N 46
ASN CB CG sing N N 47
ASN CB HB2 sing N N 48
ASN CB HB3 sing N N 49
ASN CG OD1 doub N N 50
ASN CG ND2 sing N N 51
ASN ND2 HD21 sing N N 52
ASN ND2 HD22 sing N N 53
ASN OXT HXT sing N N 54
ASP N CA sing N N 55
ASP N H sing N N 56
ASP N H2 sing N N 57
ASP CA C sing N N 58
ASP CA CB sing N N 59
ASP CA HA sing N N 60
ASP C O doub N N 61
ASP C OXT sing N N 62
ASP CB CG sing N N 63
ASP CB HB2 sing N N 64
ASP CB HB3 sing N N 65
ASP CG OD1 doub N N 66
ASP CG OD2 sing N N 67
ASP OD2 HD2 sing N N 68
ASP OXT HXT sing N N 69
FUC C1 C2 sing N N 70
FUC C1 O1 sing N N 71
FUC C1 O5 sing N N 72
FUC C1 H1 sing N N 73
FUC C2 C3 sing N N 74
FUC C2 O2 sing N N 75
FUC C2 H2 sing N N 76
FUC C3 C4 sing N N 77
FUC C3 O3 sing N N 78
FUC C3 H3 sing N N 79
FUC C4 C5 sing N N 80
FUC C4 O4 sing N N 81
FUC C4 H4 sing N N 82
FUC C5 C6 sing N N 83
FUC C5 O5 sing N N 84
FUC C5 H5 sing N N 85
FUC C6 H61 sing N N 86
FUC C6 H62 sing N N 87
FUC C6 H63 sing N N 88
FUC O1 HO1 sing N N 89
FUC O2 HO2 sing N N 90
FUC O3 HO3 sing N N 91
FUC O4 HO4 sing N N 92
GAL C1 C2 sing N N 93
GAL C1 O1 sing N N 94
GAL C1 O5 sing N N 95
GAL C1 H1 sing N N 96
GAL C2 C3 sing N N 97
GAL C2 O2 sing N N 98
GAL C2 H2 sing N N 99
GAL C3 C4 sing N N 100
GAL C3 O3 sing N N 101
GAL C3 H3 sing N N 102
GAL C4 C5 sing N N 103
GAL C4 O4 sing N N 104
GAL C4 H4 sing N N 105
GAL C5 C6 sing N N 106
GAL C5 O5 sing N N 107
GAL C5 H5 sing N N 108
GAL C6 O6 sing N N 109
GAL C6 H61 sing N N 110
GAL C6 H62 sing N N 111
GAL O1 HO1 sing N N 112
GAL O2 HO2 sing N N 113
GAL O3 HO3 sing N N 114
GAL O4 HO4 sing N N 115
GAL O6 HO6 sing N N 116
GLN N CA sing N N 117
GLN N H sing N N 118
GLN N H2 sing N N 119
GLN CA C sing N N 120
GLN CA CB sing N N 121
GLN CA HA sing N N 122
GLN C O doub N N 123
GLN C OXT sing N N 124
GLN CB CG sing N N 125
GLN CB HB2 sing N N 126
GLN CB HB3 sing N N 127
GLN CG CD sing N N 128
GLN CG HG2 sing N N 129
GLN CG HG3 sing N N 130
GLN CD OE1 doub N N 131
GLN CD NE2 sing N N 132
GLN NE2 HE21 sing N N 133
GLN NE2 HE22 sing N N 134
GLN OXT HXT sing N N 135
GLU N CA sing N N 136
GLU N H sing N N 137
GLU N H2 sing N N 138
GLU CA C sing N N 139
GLU CA CB sing N N 140
GLU CA HA sing N N 141
GLU C O doub N N 142
GLU C OXT sing N N 143
GLU CB CG sing N N 144
GLU CB HB2 sing N N 145
GLU CB HB3 sing N N 146
GLU CG CD sing N N 147
GLU CG HG2 sing N N 148
GLU CG HG3 sing N N 149
GLU CD OE1 doub N N 150
GLU CD OE2 sing N N 151
GLU OE2 HE2 sing N N 152
GLU OXT HXT sing N N 153
GLY N CA sing N N 154
GLY N H sing N N 155
GLY N H2 sing N N 156
GLY CA C sing N N 157
GLY CA HA2 sing N N 158
GLY CA HA3 sing N N 159
GLY C O doub N N 160
GLY C OXT sing N N 161
GLY OXT HXT sing N N 162
HIS N CA sing N N 163
HIS N H sing N N 164
HIS N H2 sing N N 165
HIS CA C sing N N 166
HIS CA CB sing N N 167
HIS CA HA sing N N 168
HIS C O doub N N 169
HIS C OXT sing N N 170
HIS CB CG sing N N 171
HIS CB HB2 sing N N 172
HIS CB HB3 sing N N 173
HIS CG ND1 sing Y N 174
HIS CG CD2 doub Y N 175
HIS ND1 CE1 doub Y N 176
HIS ND1 HD1 sing N N 177
HIS CD2 NE2 sing Y N 178
HIS CD2 HD2 sing N N 179
HIS CE1 NE2 sing Y N 180
HIS CE1 HE1 sing N N 181
HIS NE2 HE2 sing N N 182
HIS OXT HXT sing N N 183
HOH O H1 sing N N 184
HOH O H2 sing N N 185
ILE N CA sing N N 186
ILE N H sing N N 187
ILE N H2 sing N N 188
ILE CA C sing N N 189
ILE CA CB sing N N 190
ILE CA HA sing N N 191
ILE C O doub N N 192
ILE C OXT sing N N 193
ILE CB CG1 sing N N 194
ILE CB CG2 sing N N 195
ILE CB HB sing N N 196
ILE CG1 CD1 sing N N 197
ILE CG1 HG12 sing N N 198
ILE CG1 HG13 sing N N 199
ILE CG2 HG21 sing N N 200
ILE CG2 HG22 sing N N 201
ILE CG2 HG23 sing N N 202
ILE CD1 HD11 sing N N 203
ILE CD1 HD12 sing N N 204
ILE CD1 HD13 sing N N 205
ILE OXT HXT sing N N 206
LEU N CA sing N N 207
LEU N H sing N N 208
LEU N H2 sing N N 209
LEU CA C sing N N 210
LEU CA CB sing N N 211
LEU CA HA sing N N 212
LEU C O doub N N 213
LEU C OXT sing N N 214
LEU CB CG sing N N 215
LEU CB HB2 sing N N 216
LEU CB HB3 sing N N 217
LEU CG CD1 sing N N 218
LEU CG CD2 sing N N 219
LEU CG HG sing N N 220
LEU CD1 HD11 sing N N 221
LEU CD1 HD12 sing N N 222
LEU CD1 HD13 sing N N 223
LEU CD2 HD21 sing N N 224
LEU CD2 HD22 sing N N 225
LEU CD2 HD23 sing N N 226
LEU OXT HXT sing N N 227
LYS N CA sing N N 228
LYS N H sing N N 229
LYS N H2 sing N N 230
LYS CA C sing N N 231
LYS CA CB sing N N 232
LYS CA HA sing N N 233
LYS C O doub N N 234
LYS C OXT sing N N 235
LYS CB CG sing N N 236
LYS CB HB2 sing N N 237
LYS CB HB3 sing N N 238
LYS CG CD sing N N 239
LYS CG HG2 sing N N 240
LYS CG HG3 sing N N 241
LYS CD CE sing N N 242
LYS CD HD2 sing N N 243
LYS CD HD3 sing N N 244
LYS CE NZ sing N N 245
LYS CE HE2 sing N N 246
LYS CE HE3 sing N N 247
LYS NZ HZ1 sing N N 248
LYS NZ HZ2 sing N N 249
LYS NZ HZ3 sing N N 250
LYS OXT HXT sing N N 251
MET N CA sing N N 252
MET N H sing N N 253
MET N H2 sing N N 254
MET CA C sing N N 255
MET CA CB sing N N 256
MET CA HA sing N N 257
MET C O doub N N 258
MET C OXT sing N N 259
MET CB CG sing N N 260
MET CB HB2 sing N N 261
MET CB HB3 sing N N 262
MET CG SD sing N N 263
MET CG HG2 sing N N 264
MET CG HG3 sing N N 265
MET SD CE sing N N 266
MET CE HE1 sing N N 267
MET CE HE2 sing N N 268
MET CE HE3 sing N N 269
MET OXT HXT sing N N 270
NDG C1 C2 sing N N 271
NDG C1 O5 sing N N 272
NDG C1 O1 sing N N 273
NDG C1 H1 sing N N 274
NDG C2 C3 sing N N 275
NDG C2 N2 sing N N 276
NDG C2 H2 sing N N 277
NDG C3 C4 sing N N 278
NDG C3 O3 sing N N 279
NDG C3 H3 sing N N 280
NDG C4 C5 sing N N 281
NDG C4 O4 sing N N 282
NDG C4 H4 sing N N 283
NDG C5 C6 sing N N 284
NDG C5 O5 sing N N 285
NDG C5 H5 sing N N 286
NDG C6 O6 sing N N 287
NDG C6 H61 sing N N 288
NDG C6 H62 sing N N 289
NDG C7 C8 sing N N 290
NDG C7 O7 doub N N 291
NDG C7 N2 sing N N 292
NDG C8 H81 sing N N 293
NDG C8 H82 sing N N 294
NDG C8 H83 sing N N 295
NDG O3 HO3 sing N N 296
NDG O4 HO4 sing N N 297
NDG O6 HO6 sing N N 298
NDG N2 HN2 sing N N 299
NDG O1 HO1 sing N N 300
PHE N CA sing N N 301
PHE N H sing N N 302
PHE N H2 sing N N 303
PHE CA C sing N N 304
PHE CA CB sing N N 305
PHE CA HA sing N N 306
PHE C O doub N N 307
PHE C OXT sing N N 308
PHE CB CG sing N N 309
PHE CB HB2 sing N N 310
PHE CB HB3 sing N N 311
PHE CG CD1 doub Y N 312
PHE CG CD2 sing Y N 313
PHE CD1 CE1 sing Y N 314
PHE CD1 HD1 sing N N 315
PHE CD2 CE2 doub Y N 316
PHE CD2 HD2 sing N N 317
PHE CE1 CZ doub Y N 318
PHE CE1 HE1 sing N N 319
PHE CE2 CZ sing Y N 320
PHE CE2 HE2 sing N N 321
PHE CZ HZ sing N N 322
PHE OXT HXT sing N N 323
PRO N CA sing N N 324
PRO N CD sing N N 325
PRO N H sing N N 326
PRO CA C sing N N 327
PRO CA CB sing N N 328
PRO CA HA sing N N 329
PRO C O doub N N 330
PRO C OXT sing N N 331
PRO CB CG sing N N 332
PRO CB HB2 sing N N 333
PRO CB HB3 sing N N 334
PRO CG CD sing N N 335
PRO CG HG2 sing N N 336
PRO CG HG3 sing N N 337
PRO CD HD2 sing N N 338
PRO CD HD3 sing N N 339
PRO OXT HXT sing N N 340
SER N CA sing N N 341
SER N H sing N N 342
SER N H2 sing N N 343
SER CA C sing N N 344
SER CA CB sing N N 345
SER CA HA sing N N 346
SER C O doub N N 347
SER C OXT sing N N 348
SER CB OG sing N N 349
SER CB HB2 sing N N 350
SER CB HB3 sing N N 351
SER OG HG sing N N 352
SER OXT HXT sing N N 353
THR N CA sing N N 354
THR N H sing N N 355
THR N H2 sing N N 356
THR CA C sing N N 357
THR CA CB sing N N 358
THR CA HA sing N N 359
THR C O doub N N 360
THR C OXT sing N N 361
THR CB OG1 sing N N 362
THR CB CG2 sing N N 363
THR CB HB sing N N 364
THR OG1 HG1 sing N N 365
THR CG2 HG21 sing N N 366
THR CG2 HG22 sing N N 367
THR CG2 HG23 sing N N 368
THR OXT HXT sing N N 369
TRP N CA sing N N 370
TRP N H sing N N 371
TRP N H2 sing N N 372
TRP CA C sing N N 373
TRP CA CB sing N N 374
TRP CA HA sing N N 375
TRP C O doub N N 376
TRP C OXT sing N N 377
TRP CB CG sing N N 378
TRP CB HB2 sing N N 379
TRP CB HB3 sing N N 380
TRP CG CD1 doub Y N 381
TRP CG CD2 sing Y N 382
TRP CD1 NE1 sing Y N 383
TRP CD1 HD1 sing N N 384
TRP CD2 CE2 doub Y N 385
TRP CD2 CE3 sing Y N 386
TRP NE1 CE2 sing Y N 387
TRP NE1 HE1 sing N N 388
TRP CE2 CZ2 sing Y N 389
TRP CE3 CZ3 doub Y N 390
TRP CE3 HE3 sing N N 391
TRP CZ2 CH2 doub Y N 392
TRP CZ2 HZ2 sing N N 393
TRP CZ3 CH2 sing Y N 394
TRP CZ3 HZ3 sing N N 395
TRP CH2 HH2 sing N N 396
TRP OXT HXT sing N N 397
TYR N CA sing N N 398
TYR N H sing N N 399
TYR N H2 sing N N 400
TYR CA C sing N N 401
TYR CA CB sing N N 402
TYR CA HA sing N N 403
TYR C O doub N N 404
TYR C OXT sing N N 405
TYR CB CG sing N N 406
TYR CB HB2 sing N N 407
TYR CB HB3 sing N N 408
TYR CG CD1 doub Y N 409
TYR CG CD2 sing Y N 410
TYR CD1 CE1 sing Y N 411
TYR CD1 HD1 sing N N 412
TYR CD2 CE2 doub Y N 413
TYR CD2 HD2 sing N N 414
TYR CE1 CZ doub Y N 415
TYR CE1 HE1 sing N N 416
TYR CE2 CZ sing Y N 417
TYR CE2 HE2 sing N N 418
TYR CZ OH sing N N 419
TYR OH HH sing N N 420
TYR OXT HXT sing N N 421
VAL N CA sing N N 422
VAL N H sing N N 423
VAL N H2 sing N N 424
VAL CA C sing N N 425
VAL CA CB sing N N 426
VAL CA HA sing N N 427
VAL C O doub N N 428
VAL C OXT sing N N 429
VAL CB CG1 sing N N 430
VAL CB CG2 sing N N 431
VAL CB HB sing N N 432
VAL CG1 HG11 sing N N 433
VAL CG1 HG12 sing N N 434
VAL CG1 HG13 sing N N 435
VAL CG2 HG21 sing N N 436
VAL CG2 HG22 sing N N 437
VAL CG2 HG23 sing N N 438
VAL OXT HXT sing N N 439
#
loop_
_pdbx_entity_branch_list.entity_id
_pdbx_entity_branch_list.comp_id
_pdbx_entity_branch_list.num
_pdbx_entity_branch_list.hetero
2 NDG 1 n
2 GAL 2 n
2 FUC 3 n
#
_atom_sites.entry_id 2J7M
_atom_sites.fract_transf_matrix[1][1] 0.012934
_atom_sites.fract_transf_matrix[1][2] 0.000000
_atom_sites.fract_transf_matrix[1][3] 0.000000
_atom_sites.fract_transf_matrix[2][1] 0.000000
_atom_sites.fract_transf_matrix[2][2] 0.012934
_atom_sites.fract_transf_matrix[2][3] 0.000000
_atom_sites.fract_transf_matrix[3][1] 0.000000
_atom_sites.fract_transf_matrix[3][2] 0.000000
_atom_sites.fract_transf_matrix[3][3] 0.013484
_atom_sites.fract_transf_vector[1] 0.00000
_atom_sites.fract_transf_vector[2] 0.00000
_atom_sites.fract_transf_vector[3] 0.00000
#
loop_
_atom_type.symbol
C
CA
N
O
S
#
loop_