HEADER VIRAL PROTEIN 19-OCT-06 2J85 TITLE B116 OF SULFOLOBUS TURRETED ICOSAHEDRAL VIRUS (STIV) COMPND MOL_ID: 1; COMPND 2 MOLECULE: STIV B116; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS TURRETED ICOSAHEDRAL VIRUS; SOURCE 3 ORGANISM_COMMON: STIV; SOURCE 4 ORGANISM_TAXID: 269145; SOURCE 5 STRAIN: ISOLATE YNPRC179; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: B834(DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PDEST14; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PEXP14-STIVB116; SOURCE 11 OTHER_DETAILS: STIV WAS ISOLATED FROM SULFOLOBUS SPECIES IN ACIDIC SOURCE 12 HOT SPRINGS (PH 2.9-3.9, 72-92 DEGREES C) IN THE RABBIT CREEK SOURCE 13 THERMAL AREA WITHIN MIDWAY GEYSER BASIN INYELLOWSTONE NATIONAL PARK SOURCE 14 (RICE, ET AL. PNAS. MAY 18, 2004 VOL. 101 NO. 20. PP. 7716-7720.) KEYWDS VIRAL PROTEIN, ARCHAEAL VIRUS, CRENARCHAEAL VIRUS, B116, STIV, KEYWDS 2 ARCHAEA, SULFOLOBUS, CRENARCHAEA, SULFOLOBUS TURRETED ICOSAHEDRAL KEYWDS 3 VIRUS, HYPOTHETICAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR E.T.LARSON,D.REITER,M.J.YOUNG,C.M.LAWRENCE REVDAT 5 08-MAY-19 2J85 1 REMARK LINK REVDAT 4 13-JUL-11 2J85 1 VERSN REVDAT 3 24-FEB-09 2J85 1 VERSN REVDAT 2 19-JUN-07 2J85 1 AUTHOR JRNL REVDAT 1 02-NOV-06 2J85 0 SPRSDE 02-NOV-06 2J85 2BLK JRNL AUTH E.T.LARSON,B.J.EILERS,D.REITER,A.C.ORTMANN,M.J.YOUNG, JRNL AUTH 2 C.M.LAWRENCE JRNL TITL A NEW DNA BINDING PROTEIN HIGHLY CONSERVED IN DIVERSE JRNL TITL 2 CRENARCHAEAL VIRUSES JRNL REF VIROLOGY V. 363 387 2007 JRNL REFN ISSN 0042-6822 JRNL PMID 17336360 JRNL DOI 10.1016/J.VIROL.2007.01.027 REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.81 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 14067 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.210 REMARK 3 R VALUE (WORKING SET) : 0.208 REMARK 3 FREE R VALUE : 0.240 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 758 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.39 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.45 REMARK 3 REFLECTION IN BIN (WORKING SET) : 982 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2250 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.2220 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1878 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 72 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 28.30 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.61000 REMARK 3 B22 (A**2) : 0.13000 REMARK 3 B33 (A**2) : -0.74000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.283 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.218 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.152 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.526 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.918 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1903 ; 0.014 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 1298 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2559 ; 1.352 ; 1.971 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3190 ; 0.830 ; 3.003 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 231 ; 6.260 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 91 ;28.727 ;25.934 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 385 ;14.992 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;14.280 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 297 ; 0.074 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2067 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 347 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 327 ; 0.193 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1251 ; 0.185 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 877 ; 0.171 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1054 ; 0.086 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 75 ; 0.147 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 8 ; 0.356 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 17 ; 0.181 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 5 ; 0.120 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1197 ; 1.052 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1870 ; 1.393 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 796 ; 2.048 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 689 ; 3.142 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 10 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 2 A 40 REMARK 3 ORIGIN FOR THE GROUP (A): 43.4436 43.6980 19.5156 REMARK 3 T TENSOR REMARK 3 T11: 0.1521 T22: 0.1166 REMARK 3 T33: 0.1131 T12: 0.0171 REMARK 3 T13: -0.0162 T23: 0.0334 REMARK 3 L TENSOR REMARK 3 L11: 1.0645 L22: 0.6221 REMARK 3 L33: 5.2740 L12: 0.6462 REMARK 3 L13: -1.1532 L23: -1.6618 REMARK 3 S TENSOR REMARK 3 S11: 0.0259 S12: -0.0523 S13: -0.0268 REMARK 3 S21: 0.1357 S22: -0.0559 S23: -0.0210 REMARK 3 S31: -0.0551 S32: 0.2287 S33: 0.0301 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 41 A 75 REMARK 3 ORIGIN FOR THE GROUP (A): 54.4297 42.2972 14.5873 REMARK 3 T TENSOR REMARK 3 T11: 0.0168 T22: 0.1901 REMARK 3 T33: 0.0879 T12: 0.0600 REMARK 3 T13: 0.0156 T23: 0.0981 REMARK 3 L TENSOR REMARK 3 L11: 1.8821 L22: 3.6822 REMARK 3 L33: 4.6721 L12: -0.5503 REMARK 3 L13: -0.4512 L23: -0.8629 REMARK 3 S TENSOR REMARK 3 S11: -0.0507 S12: -0.0586 S13: -0.1298 REMARK 3 S21: 0.0593 S22: -0.3673 S23: -0.4433 REMARK 3 S31: 0.3501 S32: 0.9069 S33: 0.4180 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 76 A 86 REMARK 3 ORIGIN FOR THE GROUP (A): 44.6821 43.6076 20.7553 REMARK 3 T TENSOR REMARK 3 T11: 0.1973 T22: 0.2231 REMARK 3 T33: 0.1110 T12: 0.0085 REMARK 3 T13: -0.0297 T23: 0.0571 REMARK 3 L TENSOR REMARK 3 L11: 3.7134 L22: 28.2425 REMARK 3 L33: 8.1877 L12: -1.2461 REMARK 3 L13: -2.9851 L23: 10.9742 REMARK 3 S TENSOR REMARK 3 S11: -0.1728 S12: -0.2836 S13: -0.0369 REMARK 3 S21: 1.1242 S22: 0.2402 S23: -0.0146 REMARK 3 S31: 0.3958 S32: 0.1512 S33: -0.0674 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 87 A 108 REMARK 3 ORIGIN FOR THE GROUP (A): 50.4232 26.7003 9.0048 REMARK 3 T TENSOR REMARK 3 T11: 0.3620 T22: 0.0079 REMARK 3 T33: 0.2050 T12: 0.2696 REMARK 3 T13: 0.0396 T23: 0.0060 REMARK 3 L TENSOR REMARK 3 L11: 5.3062 L22: 5.0497 REMARK 3 L33: 2.5238 L12: 3.2905 REMARK 3 L13: -1.9613 L23: 0.3417 REMARK 3 S TENSOR REMARK 3 S11: -0.1194 S12: -0.0242 S13: -0.7506 REMARK 3 S21: -0.7104 S22: -0.3786 S23: -0.2287 REMARK 3 S31: 1.1917 S32: 0.6278 S33: 0.4980 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 109 A 119 REMARK 3 ORIGIN FOR THE GROUP (A): 39.9433 39.8420 18.7345 REMARK 3 T TENSOR REMARK 3 T11: 0.1885 T22: 0.1994 REMARK 3 T33: 0.1243 T12: -0.0290 REMARK 3 T13: -0.0075 T23: 0.0864 REMARK 3 L TENSOR REMARK 3 L11: 3.4407 L22: 4.0228 REMARK 3 L33: 5.2833 L12: 0.5665 REMARK 3 L13: -1.1379 L23: -2.1383 REMARK 3 S TENSOR REMARK 3 S11: -0.1240 S12: -0.1996 S13: -0.0519 REMARK 3 S21: -0.2089 S22: 0.2051 S23: 0.1112 REMARK 3 S31: 0.3518 S32: -0.1809 S33: -0.0811 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 2 B 24 REMARK 3 ORIGIN FOR THE GROUP (A): 35.5398 33.4977 29.3291 REMARK 3 T TENSOR REMARK 3 T11: 0.1208 T22: 0.1641 REMARK 3 T33: 0.0946 T12: 0.0010 REMARK 3 T13: -0.0061 T23: 0.0262 REMARK 3 L TENSOR REMARK 3 L11: 0.1772 L22: 1.4376 REMARK 3 L33: 4.9780 L12: 0.2947 REMARK 3 L13: -0.9021 L23: -2.1045 REMARK 3 S TENSOR REMARK 3 S11: -0.0141 S12: 0.2086 S13: -0.0061 REMARK 3 S21: -0.2076 S22: 0.1584 S23: 0.0405 REMARK 3 S31: 0.2491 S32: -0.2522 S33: -0.1443 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 25 B 46 REMARK 3 ORIGIN FOR THE GROUP (A): 34.7334 33.4679 45.8828 REMARK 3 T TENSOR REMARK 3 T11: 0.1267 T22: 0.1321 REMARK 3 T33: 0.1121 T12: 0.0198 REMARK 3 T13: 0.0215 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 2.2652 L22: 2.4614 REMARK 3 L33: 2.9150 L12: 0.4223 REMARK 3 L13: 0.4352 L23: 0.6241 REMARK 3 S TENSOR REMARK 3 S11: 0.0901 S12: -0.1019 S13: 0.0871 REMARK 3 S21: 0.1475 S22: -0.0216 S23: -0.0827 REMARK 3 S31: -0.0962 S32: -0.0122 S33: -0.0684 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 47 B 84 REMARK 3 ORIGIN FOR THE GROUP (A): 39.9596 25.8242 40.0193 REMARK 3 T TENSOR REMARK 3 T11: 0.1255 T22: 0.1441 REMARK 3 T33: 0.1200 T12: 0.0010 REMARK 3 T13: 0.0212 T23: -0.0060 REMARK 3 L TENSOR REMARK 3 L11: 3.2484 L22: 2.3260 REMARK 3 L33: 3.3763 L12: -0.4215 REMARK 3 L13: 2.1571 L23: -1.0555 REMARK 3 S TENSOR REMARK 3 S11: 0.0453 S12: 0.1443 S13: -0.0708 REMARK 3 S21: -0.1397 S22: 0.0077 S23: 0.0731 REMARK 3 S31: 0.1070 S32: -0.0212 S33: -0.0530 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 85 B 89 REMARK 3 ORIGIN FOR THE GROUP (A): 53.4896 31.8119 39.0161 REMARK 3 T TENSOR REMARK 3 T11: 0.1492 T22: 0.1576 REMARK 3 T33: 0.1552 T12: -0.0096 REMARK 3 T13: -0.0129 T23: 0.0399 REMARK 3 L TENSOR REMARK 3 L11: 46.4548 L22: 21.7375 REMARK 3 L33: 17.3410 L12: -11.3096 REMARK 3 L13: -6.5821 L23: -3.9332 REMARK 3 S TENSOR REMARK 3 S11: 0.1056 S12: 1.7427 S13: -1.0820 REMARK 3 S21: -0.3186 S22: -0.9780 S23: -0.6586 REMARK 3 S31: 0.5869 S32: 0.8983 S33: 0.8724 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 90 B 118 REMARK 3 ORIGIN FOR THE GROUP (A): 48.8939 34.1595 45.5519 REMARK 3 T TENSOR REMARK 3 T11: 0.1503 T22: 0.0923 REMARK 3 T33: 0.1382 T12: -0.0131 REMARK 3 T13: 0.0073 T23: -0.0006 REMARK 3 L TENSOR REMARK 3 L11: 2.7304 L22: 2.7043 REMARK 3 L33: 2.1882 L12: -2.2528 REMARK 3 L13: 1.4810 L23: -1.5055 REMARK 3 S TENSOR REMARK 3 S11: -0.1436 S12: -0.1790 S13: 0.2781 REMARK 3 S21: 0.2923 S22: 0.0990 S23: -0.2620 REMARK 3 S31: -0.2514 S32: 0.0620 S33: 0.0446 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. TLS GROUP SELECTIONS WERE MADE WITH THE AID OF TLS REMARK 3 MOTION DETERMINATION SERVER. PAINTER AND MERRITT. 2005. ACTA REMARK 3 CRYST D61, 465-471. CHAIN A AND CHAIN B TOGETHER MAKE UP THE REMARK 3 BIOLOGICAL MOLECULE. REMARK 4 REMARK 4 2J85 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 19-OCT-06. REMARK 100 THE DEPOSITION ID IS D_1290030290. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 27-APR-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.00 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X9B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97946 REMARK 200 MONOCHROMATOR : CRYSTAL REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 4 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14911 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 5.100 REMARK 200 R MERGE (I) : 0.07000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 5.30 REMARK 200 R MERGE FOR SHELL (I) : 0.26000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: DATA WERE COLLECTED DURING RAPIDATA 2004 COURSE AT NSLS. REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.40 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.30 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 6.5 MG/ML PROTEIN WAS CRYSTALLIZED BY REMARK 280 HANGING DROP VAPOR DIFFUSION IN 0.1 M TRIS-HCL (PH 8.0), 1.95 M REMARK 280 NH4H2PO4 AT 17 DEGREES C., PH 8.00, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 290K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 24.28650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 44.75050 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.65850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 44.75050 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 24.28650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.65850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MSE A 1 REMARK 465 HIS A 120 REMARK 465 HIS A 121 REMARK 465 HIS A 122 REMARK 465 MSE B 1 REMARK 465 HIS B 119 REMARK 465 HIS B 120 REMARK 465 HIS B 121 REMARK 465 HIS B 122 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 HIS A 119 CA C O CB CG ND1 CD2 REMARK 470 HIS A 119 CE1 NE2 REMARK 470 HIS B 118 CA C O CB CG ND1 CD2 REMARK 470 HIS B 118 CE1 NE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 OD1 ASP A 31 OD1 ASP B 31 2664 2.12 REMARK 500 REMARK 500 REMARK: NULL REMARK 999 REMARK 999 SEQUENCE REMARK 999 C-TERMINUS 6XHIS TAG WAS ADDED DURING CLONING. DBREF 2J85 A 1 116 UNP Q6Q0K9 Q6Q0K9_9VIRU 1 116 DBREF 2J85 A 117 122 PDB 2J85 2J85 117 122 DBREF 2J85 B 1 116 UNP Q6Q0K9 Q6Q0K9_9VIRU 1 116 DBREF 2J85 B 117 122 PDB 2J85 2J85 117 122 SEQRES 1 A 122 MSE GLY LYS VAL PHE LEU THR ASN ALA PHE SER ILE ASN SEQRES 2 A 122 MSE LEU LYS GLU PHE PRO THR THR ILE THR ILE ASP LYS SEQRES 3 A 122 LEU ASP GLU GLU ASP PHE CYS LEU LYS LEU GLU LEU ARG SEQRES 4 A 122 LEU GLU ASP GLY THR LEU ILE ASN ALA ILE GLY HIS ASP SEQRES 5 A 122 SER THR ILE ASN LEU VAL ASN THR LEU CYS GLY THR GLN SEQRES 6 A 122 LEU GLN LYS ASN ARG VAL GLU VAL LYS MSE ASN GLU GLY SEQRES 7 A 122 ASP GLU ALA LEU ILE ILE MSE ILE SER GLN ARG LEU GLU SEQRES 8 A 122 GLU GLY LYS VAL LEU SER ASP LYS GLU ILE LYS ASP MSE SEQRES 9 A 122 TYR ARG GLN GLY LYS ILE SER PHE TYR GLU VAL TRP HIS SEQRES 10 A 122 HIS HIS HIS HIS HIS SEQRES 1 B 122 MSE GLY LYS VAL PHE LEU THR ASN ALA PHE SER ILE ASN SEQRES 2 B 122 MSE LEU LYS GLU PHE PRO THR THR ILE THR ILE ASP LYS SEQRES 3 B 122 LEU ASP GLU GLU ASP PHE CYS LEU LYS LEU GLU LEU ARG SEQRES 4 B 122 LEU GLU ASP GLY THR LEU ILE ASN ALA ILE GLY HIS ASP SEQRES 5 B 122 SER THR ILE ASN LEU VAL ASN THR LEU CYS GLY THR GLN SEQRES 6 B 122 LEU GLN LYS ASN ARG VAL GLU VAL LYS MSE ASN GLU GLY SEQRES 7 B 122 ASP GLU ALA LEU ILE ILE MSE ILE SER GLN ARG LEU GLU SEQRES 8 B 122 GLU GLY LYS VAL LEU SER ASP LYS GLU ILE LYS ASP MSE SEQRES 9 B 122 TYR ARG GLN GLY LYS ILE SER PHE TYR GLU VAL TRP HIS SEQRES 10 B 122 HIS HIS HIS HIS HIS MODRES 2J85 MSE A 14 MET SELENOMETHIONINE MODRES 2J85 MSE A 75 MET SELENOMETHIONINE MODRES 2J85 MSE A 85 MET SELENOMETHIONINE MODRES 2J85 MSE A 104 MET SELENOMETHIONINE MODRES 2J85 MSE B 14 MET SELENOMETHIONINE MODRES 2J85 MSE B 75 MET SELENOMETHIONINE MODRES 2J85 MSE B 85 MET SELENOMETHIONINE MODRES 2J85 MSE B 104 MET SELENOMETHIONINE HET MSE A 14 8 HET MSE A 75 8 HET MSE A 85 8 HET MSE A 104 8 HET MSE B 14 8 HET MSE B 75 8 HET MSE B 85 8 HET MSE B 104 8 HETNAM MSE SELENOMETHIONINE FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 HOH *72(H2 O) HELIX 1 1 SER A 11 MSE A 14 5 4 HELIX 2 2 ASP A 28 ASP A 42 1 15 HELIX 3 3 HIS A 51 GLY A 63 1 13 HELIX 4 4 SER A 97 GLN A 107 1 11 HELIX 5 5 SER B 11 MSE B 14 5 4 HELIX 6 6 ASP B 28 ASP B 42 1 15 HELIX 7 7 HIS B 51 GLY B 63 1 13 HELIX 8 8 SER B 97 GLN B 107 1 11 SHEET 1 AA10 LEU A 45 ASN A 47 0 SHEET 2 AA10 VAL A 4 THR A 7 1 O VAL A 4 N ILE A 46 SHEET 3 AA10 GLU A 80 ILE A 86 1 O GLU A 80 N PHE A 5 SHEET 4 AA10 ILE A 110 HIS A 117 -1 O SER A 111 N MSE A 85 SHEET 5 AA10 THR A 20 LEU A 27 -1 O THR A 23 N TRP A 116 SHEET 6 AA10 THR B 20 LEU B 27 -1 O THR B 20 N ILE A 24 SHEET 7 AA10 ILE B 110 TRP B 116 -1 O PHE B 112 N LEU B 27 SHEET 8 AA10 GLU B 80 ILE B 86 -1 O ALA B 81 N VAL B 115 SHEET 9 AA10 VAL B 4 THR B 7 1 O PHE B 5 N LEU B 82 SHEET 10 AA10 LEU B 45 ASN B 47 1 O ILE B 46 N LEU B 6 SSBOND 1 CYS A 33 CYS A 62 1555 1555 2.04 SSBOND 2 CYS B 33 CYS B 62 1555 1555 2.04 LINK C ASN A 13 N MSE A 14 1555 1555 1.33 LINK C MSE A 14 N LEU A 15 1555 1555 1.34 LINK C LYS A 74 N MSE A 75 1555 1555 1.32 LINK C MSE A 75 N ASN A 76 1555 1555 1.33 LINK C ILE A 84 N MSE A 85 1555 1555 1.33 LINK C MSE A 85 N ILE A 86 1555 1555 1.32 LINK C ASP A 103 N MSE A 104 1555 1555 1.33 LINK C MSE A 104 N TYR A 105 1555 1555 1.33 LINK C ASN B 13 N MSE B 14 1555 1555 1.33 LINK C MSE B 14 N LEU B 15 1555 1555 1.33 LINK C LYS B 74 N MSE B 75 1555 1555 1.33 LINK C MSE B 75 N ASN B 76 1555 1555 1.33 LINK C ILE B 84 N MSE B 85 1555 1555 1.33 LINK C MSE B 85 N ILE B 86 1555 1555 1.33 LINK C ASP B 103 N MSE B 104 1555 1555 1.34 LINK C MSE B 104 N TYR B 105 1555 1555 1.33 CISPEP 1 PHE A 18 PRO A 19 0 -0.98 CISPEP 2 PHE B 18 PRO B 19 0 -0.90 CRYST1 48.573 83.317 89.501 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.020588 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012002 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011173 0.00000