HEADER    HYDROLASE                               25-OCT-06   2J8F              
TITLE     CRYSTAL STRUCTURE OF THE MODULAR CPL-1 ENDOLYSIN COMPLEXED WITH A     
TITLE    2 PEPTIDOGLYCAN ANALOGUE (E94Q MUTANT IN COMPLEX WITH A DISACCHARIDE-  
TITLE    3 PENTAPEPTIDE)                                                        
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: LYSOZYME;                                                  
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: RESIDUES 2-339;                                            
COMPND   5 SYNONYM: ENDOLYSIN, MURAMIDASE, CP-1 LYSIN, CPL-1;                   
COMPND   6 EC: 3.2.1.17;                                                        
COMPND   7 ENGINEERED: YES;                                                     
COMPND   8 MUTATION: YES                                                        
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: BACTERIOPHAGE CP-1;                             
SOURCE   3 ORGANISM_TAXID: 10747;                                               
SOURCE   4 EXPRESSION_SYSTEM: ESCHERICHIA COLI DH1;                             
SOURCE   5 EXPRESSION_SYSTEM_TAXID: 536056                                      
KEYWDS    ANTIMICROBIAL, MUEIN HYDROLASE, BACTERIOLYTIC ENZYME, PNEUMOCOCCAL    
KEYWDS   2 CELL WALL DEGRADATION, LYSOZYME, HYDROLASE, GLYCOSIDASE,             
KEYWDS   3 MULTIMODULAR                                                         
EXPDTA    X-RAY DIFFRACTION                                                     
AUTHOR    I.PEREZ-DORADO,J.A.HERMOSO                                            
REVDAT   6   13-DEC-23 2J8F    1       HETSYN LINK                              
REVDAT   5   29-JUL-20 2J8F    1       COMPND REMARK HETNAM LINK                
REVDAT   5 2                   1       SITE   ATOM                              
REVDAT   4   10-APR-19 2J8F    1       SOURCE LINK                              
REVDAT   3   24-FEB-09 2J8F    1       VERSN                                    
REVDAT   2   28-AUG-07 2J8F    1                                                
REVDAT   1   03-JUL-07 2J8F    0                                                
JRNL        AUTH   I.PEREZ-DORADO,N.E.CAMPILLO,B.MONTERROSO,D.HESEK,M.LEE,      
JRNL        AUTH 2 J.A.PAEZ,P.GARCIA,M.MARTINEZ-RIPOLL,J.L.GARCIA,S.MOBASHERY,  
JRNL        AUTH 3 M.MENENDEZ,J.A.HERMOSO                                       
JRNL        TITL   ELUCIDATION OF THE MOLECULAR RECOGNITION OF BACTERIAL CELL   
JRNL        TITL 2 WALL BY MODULAR PNEUMOCOCCAL PHAGE ENDOLYSIN CPL-1.          
JRNL        REF    J.BIOL.CHEM.                  V. 282 24990 2007              
JRNL        REFN                   ISSN 0021-9258                               
JRNL        PMID   17581815                                                     
JRNL        DOI    10.1074/JBC.M704317200                                       
REMARK   1                                                                      
REMARK   1 REFERENCE 1                                                          
REMARK   1  AUTH   J.A.HERMOSO,B.MONTERROSO,A.ALBERT,B.GALAN,O.AHRAZEM,         
REMARK   1  AUTH 2 P.GARCIA,M.MARTINEZ-RIPOLL,J.L.GARCIA,M.MENENDEZ             
REMARK   1  TITL   STRUCTURAL BASIS FOR SELECTIVE RECOGNITION OF PNEUMOCOCCAL   
REMARK   1  TITL 2 CELL WALL BY MODULAR ENDOLYSIN FROM PHAGE CP-1               
REMARK   1  REF    STRUCTURE                     V.  11  1239 2003              
REMARK   1  REFN                   ISSN 0969-2126                               
REMARK   1  PMID   14527392                                                     
REMARK   1  DOI    10.1016/J.STR.2003.09.005                                    
REMARK   1 REFERENCE 2                                                          
REMARK   1  AUTH   B.MONTERROSO,A.ALBERT,M.MARTINEZ-RIPOLL,P.GARCIA,J.L.GARCIA, 
REMARK   1  AUTH 2 M.MENENDEZ,J.A.HERMOSO                                       
REMARK   1  TITL   CRYSTALLIZATION AND PRELIMINARY X-RAY DIFFRACTION STUDIES OF 
REMARK   1  TITL 2 THE COMPLETE MODULAR ENDOLYSIN FROM CP-1, A PHAGE INFECTING  
REMARK   1  TITL 3 STREPTOCOCCUS PNEUMONIAE                                     
REMARK   1  REF    ACTA CRYSTALLOGR.,SECT.D      V.  58  1487 2002              
REMARK   1  REFN                   ISSN 0907-4449                               
REMARK   1  PMID   12198311                                                     
REMARK   1  DOI    10.1107/S0907444902011563                                    
REMARK   2                                                                      
REMARK   2 RESOLUTION.    1.84 ANGSTROMS.                                       
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : CNS 1.0                                              
REMARK   3   AUTHORS     : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE-              
REMARK   3               : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU,              
REMARK   3               : READ,RICE,SIMONSON,WARREN                            
REMARK   3                                                                      
REMARK   3  REFINEMENT TARGET : NULL                                            
REMARK   3                                                                      
REMARK   3  DATA USED IN REFINEMENT.                                            
REMARK   3   RESOLUTION RANGE HIGH (ANGSTROMS) : 1.84                           
REMARK   3   RESOLUTION RANGE LOW  (ANGSTROMS) : 64.55                          
REMARK   3   DATA CUTOFF            (SIGMA(F)) : NULL                           
REMARK   3   DATA CUTOFF HIGH         (ABS(F)) : NULL                           
REMARK   3   DATA CUTOFF LOW          (ABS(F)) : NULL                           
REMARK   3   COMPLETENESS (WORKING+TEST)   (%) : 96.1                           
REMARK   3   NUMBER OF REFLECTIONS             : 38759                          
REMARK   3                                                                      
REMARK   3  FIT TO DATA USED IN REFINEMENT.                                     
REMARK   3   CROSS-VALIDATION METHOD          : THROUGHOUT                      
REMARK   3   FREE R VALUE TEST SET SELECTION  : RANDOM                          
REMARK   3   R VALUE            (WORKING SET) : 0.181                           
REMARK   3   FREE R VALUE                     : 0.215                           
REMARK   3   FREE R VALUE TEST SET SIZE   (%) : 7.100                           
REMARK   3   FREE R VALUE TEST SET COUNT      : 2960                            
REMARK   3   ESTIMATED ERROR OF FREE R VALUE  : NULL                            
REMARK   3                                                                      
REMARK   3  FIT IN THE HIGHEST RESOLUTION BIN.                                  
REMARK   3   TOTAL NUMBER OF BINS USED           : 20                           
REMARK   3   BIN RESOLUTION RANGE HIGH       (A) : 1.84                         
REMARK   3   BIN RESOLUTION RANGE LOW        (A) : 1.89                         
REMARK   3   BIN COMPLETENESS (WORKING+TEST) (%) : NULL                         
REMARK   3   REFLECTIONS IN BIN    (WORKING SET) : 2180                         
REMARK   3   BIN R VALUE           (WORKING SET) : 0.3070                       
REMARK   3   BIN FREE R VALUE                    : 0.2990                       
REMARK   3   BIN FREE R VALUE TEST SET SIZE  (%) : NULL                         
REMARK   3   BIN FREE R VALUE TEST SET COUNT     : 155                          
REMARK   3   ESTIMATED ERROR OF BIN FREE R VALUE : NULL                         
REMARK   3                                                                      
REMARK   3  NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.                    
REMARK   3   PROTEIN ATOMS            : 2763                                    
REMARK   3   NUCLEIC ACID ATOMS       : 0                                       
REMARK   3   HETEROGEN ATOMS          : 90                                      
REMARK   3   SOLVENT ATOMS            : 333                                     
REMARK   3                                                                      
REMARK   3  B VALUES.                                                           
REMARK   3   FROM WILSON PLOT           (A**2) : NULL                           
REMARK   3   MEAN B VALUE      (OVERALL, A**2) : 23.02                          
REMARK   3   OVERALL ANISOTROPIC B VALUE.                                       
REMARK   3    B11 (A**2) : -1.59000                                             
REMARK   3    B22 (A**2) : 1.43000                                              
REMARK   3    B33 (A**2) : 0.15000                                              
REMARK   3    B12 (A**2) : 0.00000                                              
REMARK   3    B13 (A**2) : 0.00000                                              
REMARK   3    B23 (A**2) : 0.00000                                              
REMARK   3                                                                      
REMARK   3  ESTIMATED COORDINATE ERROR.                                         
REMARK   3   ESD FROM LUZZATI PLOT        (A) : NULL                            
REMARK   3   ESD FROM SIGMAA              (A) : NULL                            
REMARK   3   LOW RESOLUTION CUTOFF        (A) : NULL                            
REMARK   3                                                                      
REMARK   3  CROSS-VALIDATED ESTIMATED COORDINATE ERROR.                         
REMARK   3   ESD FROM C-V LUZZATI PLOT    (A) : NULL                            
REMARK   3   ESD FROM C-V SIGMAA          (A) : NULL                            
REMARK   3                                                                      
REMARK   3  RMS DEVIATIONS FROM IDEAL VALUES.                                   
REMARK   3   BOND LENGTHS                 (A) : 0.017                           
REMARK   3   BOND ANGLES            (DEGREES) : 1.565                           
REMARK   3   DIHEDRAL ANGLES        (DEGREES) : NULL                            
REMARK   3   IMPROPER ANGLES        (DEGREES) : NULL                            
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL MODEL : RESTRAINED                                
REMARK   3                                                                      
REMARK   3  ISOTROPIC THERMAL FACTOR RESTRAINTS.    RMS    SIGMA                
REMARK   3   MAIN-CHAIN BOND              (A**2) : 1.190 ; 1.500                
REMARK   3   MAIN-CHAIN ANGLE             (A**2) : 2.092 ; 2.000                
REMARK   3   SIDE-CHAIN BOND              (A**2) : 2.655 ; 3.000                
REMARK   3   SIDE-CHAIN ANGLE             (A**2) : 4.103 ; 4.500                
REMARK   3                                                                      
REMARK   3  BULK SOLVENT MODELING.                                              
REMARK   3   METHOD USED : BABINET MODEL WITH MASK                              
REMARK   3   KSOL        : NULL                                                 
REMARK   3   BSOL        : NULL                                                 
REMARK   3                                                                      
REMARK   3  NCS MODEL : NULL                                                    
REMARK   3                                                                      
REMARK   3  NCS RESTRAINTS.                         RMS   SIGMA/WEIGHT          
REMARK   3   GROUP  1  POSITIONAL            (A) : NULL  ; NULL                 
REMARK   3   GROUP  1  B-FACTOR           (A**2) : NULL  ; NULL                 
REMARK   3                                                                      
REMARK   3  PARAMETER FILE  1  : NULL                                           
REMARK   3  TOPOLOGY FILE  1   : NULL                                           
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2J8F COMPLIES WITH FORMAT V. 3.30, 13-JUL-11                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 25-OCT-06.                  
REMARK 100 THE DEPOSITION ID IS D_1290030144.                                   
REMARK 200                                                                      
REMARK 200 EXPERIMENTAL DETAILS                                                 
REMARK 200  EXPERIMENT TYPE                : X-RAY DIFFRACTION                  
REMARK 200  DATE OF DATA COLLECTION        : 14-JUL-06                          
REMARK 200  TEMPERATURE           (KELVIN) : 100                                
REMARK 200  PH                             : 6.0                                
REMARK 200  NUMBER OF CRYSTALS USED        : 1                                  
REMARK 200                                                                      
REMARK 200  SYNCHROTRON              (Y/N) : Y                                  
REMARK 200  RADIATION SOURCE               : ESRF                               
REMARK 200  BEAMLINE                       : ID29                               
REMARK 200  X-RAY GENERATOR MODEL          : NULL                               
REMARK 200  MONOCHROMATIC OR LAUE    (M/L) : M                                  
REMARK 200  WAVELENGTH OR RANGE        (A) : 0.9760                             
REMARK 200  MONOCHROMATOR                  : NULL                               
REMARK 200  OPTICS                         : NULL                               
REMARK 200                                                                      
REMARK 200  DETECTOR TYPE                  : CCD                                
REMARK 200  DETECTOR MANUFACTURER          : ADSC CCD                           
REMARK 200  INTENSITY-INTEGRATION SOFTWARE : MOSFLM                             
REMARK 200  DATA SCALING SOFTWARE          : SCALA                              
REMARK 200                                                                      
REMARK 200  NUMBER OF UNIQUE REFLECTIONS   : 47836                              
REMARK 200  RESOLUTION RANGE HIGH      (A) : 1.650                              
REMARK 200  RESOLUTION RANGE LOW       (A) : 64.550                             
REMARK 200  REJECTION CRITERIA  (SIGMA(I)) : 1.000                              
REMARK 200                                                                      
REMARK 200 OVERALL.                                                             
REMARK 200  COMPLETENESS FOR RANGE     (%) : 96.3                               
REMARK 200  DATA REDUNDANCY                : 5.400                              
REMARK 200  R MERGE                    (I) : 0.12000                            
REMARK 200  R SYM                      (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR THE DATA SET  : 3.3000                             
REMARK 200                                                                      
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.                                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.84                     
REMARK 200  HIGHEST RESOLUTION SHELL, RANGE LOW  (A) : 1.97                     
REMARK 200  COMPLETENESS FOR SHELL     (%) : 81.6                               
REMARK 200  DATA REDUNDANCY IN SHELL       : 2.90                               
REMARK 200  R MERGE FOR SHELL          (I) : 0.46000                            
REMARK 200  R SYM FOR SHELL            (I) : NULL                               
REMARK 200  <I/SIGMA(I)> FOR SHELL         : 0.900                              
REMARK 200                                                                      
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH                              
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT        
REMARK 200 SOFTWARE USED: MOLREP                                                
REMARK 200 STARTING MODEL: PDB ENTRY 1H09                                       
REMARK 200                                                                      
REMARK 200 REMARK: NONE                                                         
REMARK 280                                                                      
REMARK 280 CRYSTAL                                                              
REMARK 280 SOLVENT CONTENT, VS   (%): 61.29                                     
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.18                     
REMARK 280                                                                      
REMARK 280 CRYSTALLIZATION CONDITIONS: PH 6.0                                   
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY                                            
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 2 2 21                         
REMARK 290                                                                      
REMARK 290      SYMOP   SYMMETRY                                                
REMARK 290     NNNMMM   OPERATOR                                                
REMARK 290       1555   X,Y,Z                                                   
REMARK 290       2555   -X,-Y,Z+1/2                                             
REMARK 290       3555   -X,Y,-Z+1/2                                             
REMARK 290       4555   X,-Y,-Z                                                 
REMARK 290       5555   X+1/2,Y+1/2,Z                                           
REMARK 290       6555   -X+1/2,-Y+1/2,Z+1/2                                     
REMARK 290       7555   -X+1/2,Y+1/2,-Z+1/2                                     
REMARK 290       8555   X+1/2,-Y+1/2,-Z                                         
REMARK 290                                                                      
REMARK 290     WHERE NNN -> OPERATOR NUMBER                                     
REMARK 290           MMM -> TRANSLATION VECTOR                                  
REMARK 290                                                                      
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS                            
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM             
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY                
REMARK 290 RELATED MOLECULES.                                                   
REMARK 290   SMTRY1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   2 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   2  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   2  0.000000  0.000000  1.000000       64.63500            
REMARK 290   SMTRY1   3 -1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   3  0.000000  1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   3  0.000000  0.000000 -1.000000       64.63500            
REMARK 290   SMTRY1   4  1.000000  0.000000  0.000000        0.00000            
REMARK 290   SMTRY2   4  0.000000 -1.000000  0.000000        0.00000            
REMARK 290   SMTRY3   4  0.000000  0.000000 -1.000000        0.00000            
REMARK 290   SMTRY1   5  1.000000  0.000000  0.000000       40.11500            
REMARK 290   SMTRY2   5  0.000000  1.000000  0.000000       47.79500            
REMARK 290   SMTRY3   5  0.000000  0.000000  1.000000        0.00000            
REMARK 290   SMTRY1   6 -1.000000  0.000000  0.000000       40.11500            
REMARK 290   SMTRY2   6  0.000000 -1.000000  0.000000       47.79500            
REMARK 290   SMTRY3   6  0.000000  0.000000  1.000000       64.63500            
REMARK 290   SMTRY1   7 -1.000000  0.000000  0.000000       40.11500            
REMARK 290   SMTRY2   7  0.000000  1.000000  0.000000       47.79500            
REMARK 290   SMTRY3   7  0.000000  0.000000 -1.000000       64.63500            
REMARK 290   SMTRY1   8  1.000000  0.000000  0.000000       40.11500            
REMARK 290   SMTRY2   8  0.000000 -1.000000  0.000000       47.79500            
REMARK 290   SMTRY3   8  0.000000  0.000000 -1.000000        0.00000            
REMARK 290                                                                      
REMARK 290 REMARK: NULL                                                         
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC                  
REMARK 350 SOFTWARE USED: PQS                                                   
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C                               
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 375                                                                      
REMARK 375 SPECIAL POSITION                                                     
REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS            
REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL          
REMARK 375 POSITIONS.                                                           
REMARK 375                                                                      
REMARK 375 ATOM RES CSSEQI                                                      
REMARK 375      HOH A2073  LIES ON A SPECIAL POSITION.                          
REMARK 400                                                                      
REMARK 400 COMPOUND                                                             
REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 94 TO GLN                         
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                
REMARK 465                                                                      
REMARK 465   M RES C SSSEQI                                                     
REMARK 465     MET A     1                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT                     
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    HOH A  2141     O    HOH A  2323              2.18            
REMARK 500   OE1  GLN A   113     O    HOH A  2132              2.18            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: COVALENT BOND ANGLES                                       
REMARK 500                                                                      
REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES              
REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE               
REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN               
REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                 
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1)              
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999                        
REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996                     
REMARK 500                                                                      
REMARK 500  M RES CSSEQI ATM1   ATM2   ATM3                                     
REMARK 500    ASP A 276   CB  -  CG  -  OD2 ANGL. DEV. =   6.5 DEGREES          
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500    SER A  38     -138.52     54.89                                   
REMARK 500    GLN A  94       12.66   -143.83                                   
REMARK 500    SER A 126     -168.13   -168.91                                   
REMARK 500    ASP A 193        0.75    -62.75                                   
REMARK 500    ASP A 205     -165.69   -121.14                                   
REMARK 500    GLU A 249       -3.39     75.91                                   
REMARK 500    LYS A 288     -114.79     63.90                                   
REMARK 500    ASN A 296       28.75   -142.79                                   
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 525                                                                      
REMARK 525 SOLVENT                                                              
REMARK 525                                                                      
REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT                    
REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST                  
REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT                 
REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE                       
REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER;                             
REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE                  
REMARK 525 NUMBER; I=INSERTION CODE):                                           
REMARK 525                                                                      
REMARK 525  M RES CSSEQI                                                        
REMARK 525    HOH A2008        DISTANCE =  6.11 ANGSTROMS                       
REMARK 525    HOH A2042        DISTANCE =  8.34 ANGSTROMS                       
REMARK 525    HOH A2097        DISTANCE =  6.08 ANGSTROMS                       
REMARK 610                                                                      
REMARK 610 MISSING HETEROATOM                                                   
REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER;           
REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER;          
REMARK 610 I=INSERTION CODE):                                                   
REMARK 610   M RES C SSEQI                                                      
REMARK 610     ALA A 2346                                                       
REMARK 610     DGL A 1343                                                       
REMARK 700                                                                      
REMARK 700 SHEET                                                                
REMARK 700 DETERMINATION METHOD: DSSP                                           
REMARK 700 THE SHEETS PRESENTED AS "AA" IN EACH CHAIN ON SHEET RECORDS          
REMARK 700 BELOW IS ACTUALLY AN 10-STRANDED BARREL THIS IS REPRESENTED BY       
REMARK 700 A 11-STRANDED SHEET IN WHICH THE FIRST AND LAST STRANDS              
REMARK 700 ARE IDENTICAL.                                                       
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 1H09   RELATED DB: PDB                                   
REMARK 900 MULTIMODULAR PNEUMOCOCCAL CELL WALL ENDOLYSIN FROM PHAGE CP-1        
REMARK 900 RELATED ID: 1OBA   RELATED DB: PDB                                   
REMARK 900 MULTIMODULAR PNEUMOCOCCAL CELL WALL ENDOLYSIN FROM PHAGE CP-1        
REMARK 900 COMPLEXED WITH CHOLINE                                               
REMARK 900 RELATED ID: 2IXU   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF THE MODULAR CPL-1 ENDOLYSIN COMPLEXED WITH A    
REMARK 900 PEPTIDOGLYCAN ANALOGUE (WILD-TYPE ENDOLYSIN)                         
REMARK 900 RELATED ID: 2IXV   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF THE MODULAR CPL-1 ENDOLYSIN COMPLEXED WITH A    
REMARK 900 PEPTIDOGLYCAN ANALOGUE (E94Q MUTANT)                                 
REMARK 900 RELATED ID: 2J8G   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF THE MODULAR CPL-1 ENDOLYSIN COMPLEXED WITH A    
REMARK 900 PEPTIDOGLYCAN ANALOGUE (E94Q MUTANT IN COMPLEX WITH A                
REMARK 900 TETRASACCHARIDE-PENTAPEPTIDE)                                        
DBREF  2J8F A    1   339  UNP    P15057   LYS_BPCP1        1    339             
SEQADV 2J8F GLN A   94  UNP  P15057    GLU    94 ENGINEERED MUTATION            
SEQRES   1 A  339  MET VAL LYS LYS ASN ASP LEU PHE VAL ASP VAL SER SER          
SEQRES   2 A  339  HIS ASN GLY TYR ASP ILE THR GLY ILE LEU GLU GLN MET          
SEQRES   3 A  339  GLY THR THR ASN THR ILE ILE LYS ILE SER GLU SER THR          
SEQRES   4 A  339  THR TYR LEU ASN PRO CYS LEU SER ALA GLN VAL GLU GLN          
SEQRES   5 A  339  SER ASN PRO ILE GLY PHE TYR HIS PHE ALA ARG PHE GLY          
SEQRES   6 A  339  GLY ASP VAL ALA GLU ALA GLU ARG GLU ALA GLN PHE PHE          
SEQRES   7 A  339  LEU ASP ASN VAL PRO MET GLN VAL LYS TYR LEU VAL LEU          
SEQRES   8 A  339  ASP TYR GLN ASP ASP PRO SER GLY ASP ALA GLN ALA ASN          
SEQRES   9 A  339  THR ASN ALA CYS LEU ARG PHE MET GLN MET ILE ALA ASP          
SEQRES  10 A  339  ALA GLY TYR LYS PRO ILE TYR TYR SER TYR LYS PRO PHE          
SEQRES  11 A  339  THR HIS ASP ASN VAL ASP TYR GLN GLN ILE LEU ALA GLN          
SEQRES  12 A  339  PHE PRO ASN SER LEU TRP ILE ALA GLY TYR GLY LEU ASN          
SEQRES  13 A  339  ASP GLY THR ALA ASN PHE GLU TYR PHE PRO SER MET ASP          
SEQRES  14 A  339  GLY ILE ARG TRP TRP GLN TYR SER SER ASN PRO PHE ASP          
SEQRES  15 A  339  LYS ASN ILE VAL LEU LEU ASP ASP GLU GLU ASP ASP LYS          
SEQRES  16 A  339  PRO LYS THR ALA GLY THR TRP LYS GLN ASP SER LYS GLY          
SEQRES  17 A  339  TRP TRP PHE ARG ARG ASN ASN GLY SER PHE PRO TYR ASN          
SEQRES  18 A  339  LYS TRP GLU LYS ILE GLY GLY VAL TRP TYR TYR PHE ASP          
SEQRES  19 A  339  SER LYS GLY TYR CYS LEU THR SER GLU TRP LEU LYS ASP          
SEQRES  20 A  339  ASN GLU LYS TRP TYR TYR LEU LYS ASP ASN GLY ALA MET          
SEQRES  21 A  339  ALA THR GLY TRP VAL LEU VAL GLY SER GLU TRP TYR TYR          
SEQRES  22 A  339  MET ASP ASP SER GLY ALA MET VAL THR GLY TRP VAL LYS          
SEQRES  23 A  339  TYR LYS ASN ASN TRP TYR TYR MET THR ASN GLU ARG GLY          
SEQRES  24 A  339  ASN MET VAL SER ASN GLU PHE ILE LYS SER GLY LYS GLY          
SEQRES  25 A  339  TRP TYR PHE MET ASN THR ASN GLY GLU LEU ALA ASP ASN          
SEQRES  26 A  339  PRO SER PHE THR LYS GLU PRO ASP GLY LEU ILE THR VAL          
SEQRES  27 A  339  ALA                                                          
HET    AMV  B   1      20                                                       
HET    NAG  B   2      14                                                       
HET    AMV  C   1      20                                                       
HET    NAG  C   2      14                                                       
HET    ALA  A2342       5                                                       
HET    ALA  A2346       5                                                       
HET    DGL  A1343       9                                                       
HET    FMT  A1347       3                                                       
HETNAM     AMV METHYL 2-ACETAMIDO-3-O-[(1R)-1-CARBOXYETHYL]-2-DEOXY-            
HETNAM   2 AMV  BETA-D-GLUCOPYRANOSIDE                                          
HETNAM     NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE                         
HETNAM     ALA ALANINE                                                          
HETNAM     DGL D-GLUTAMIC ACID                                                  
HETNAM     FMT FORMIC ACID                                                      
HETSYN     AMV METHYL 2-(ACETYLAMINO)-3-O-[(1R)-1-CARBOXYETHYL]-2-              
HETSYN   2 AMV  DEOXY-BETA-D-GLUCOPYRANOSIDE; METHYL 2-ACETAMIDO-3-O-           
HETSYN   3 AMV  [(1R)-1-CARBOXYETHYL]-2-DEOXY-BETA-D-GLUCOSIDE; METHYL          
HETSYN   4 AMV  2-ACETAMIDO-3-O-[(1R)-1-CARBOXYETHYL]-2-DEOXY-D-                
HETSYN   5 AMV  GLUCOSIDE; METHYL 2-ACETAMIDO-3-O-[(1R)-1-                      
HETSYN   6 AMV  CARBOXYETHYL]-2-DEOXY-GLUCOSIDE                                 
HETSYN     NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA-           
HETSYN   2 NAG  D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO-          
HETSYN   3 NAG  2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE                         
FORMUL   2  AMV    2(C12 H21 N O8)                                              
FORMUL   2  NAG    2(C8 H15 N O6)                                               
FORMUL   4  ALA    2(C3 H7 N O2)                                                
FORMUL   6  DGL    C5 H9 N O4                                                   
FORMUL   7  FMT    C H2 O2                                                      
FORMUL   8  HOH   *333(H2 O)                                                    
HELIX    1   1 SER A   12  GLY A   16  5                                   5    
HELIX    2   2 ILE A   19  GLY A   27  1                                   9    
HELIX    3   3 CYS A   45  GLN A   52  1                                   8    
HELIX    4   4 ASP A   67  ASN A   81  1                                  15    
HELIX    5   5 ASP A  100  ALA A  118  1                                  19    
HELIX    6   6 LYS A  128  VAL A  135  1                                   8    
HELIX    7   7 ASP A  136  PHE A  144  1                                   9    
HELIX    8   8 ASN A  161  PHE A  165  5                                   5    
HELIX    9   9 ASN A  296  ASN A  300  5                                   5    
SHEET    1  AA11 LEU A   7  VAL A  11  0                                        
SHEET    2  AA11 ASP A 182  VAL A 186 -1  O  ASP A 182   N  ASP A  10           
SHEET    3  AA11 ILE A 171  SER A 177 -1  O  TRP A 174   N  ILE A 185           
SHEET    4  AA11 LEU A 148  ALA A 151  1  O  LEU A 148   N  ARG A 172           
SHEET    5  AA11 LYS A 121  TYR A 127  1  O  TYR A 124   N  TRP A 149           
SHEET    6  AA11 TYR A  88  ASP A  92  1  O  LEU A  89   N  ILE A 123           
SHEET    7  AA11 ASN A  54  PHE A  61  1  O  ILE A  56   N  TYR A  88           
SHEET    8  AA11 ASN A  30  GLU A  37  1  O  THR A  31   N  ILE A  56           
SHEET    9  AA11 LEU A   7  VAL A  11  1  O  VAL A   9   N  ILE A  32           
SHEET   10  AA11 ASP A 182  VAL A 186 -1  O  ASP A 182   N  ASP A  10           
SHEET   11  AA11 LEU A   7  VAL A  11 -1  O  PHE A   8   N  ASN A 184           
SHEET    1  AB 2 GLY A 200  GLN A 204  0                                        
SHEET    2  AB 2 TRP A 209  ARG A 213 -1  O  TRP A 210   N  LYS A 203           
SHEET    1  AC 2 LYS A 222  ILE A 226  0                                        
SHEET    2  AC 2 VAL A 229  PHE A 233 -1  O  VAL A 229   N  ILE A 226           
SHEET    1  AD 2 GLU A 243  ASP A 247  0                                        
SHEET    2  AD 2 LYS A 250  LEU A 254 -1  O  LYS A 250   N  ASP A 247           
SHEET    1  AE 2 GLY A 263  VAL A 267  0                                        
SHEET    2  AE 2 GLU A 270  MET A 274 -1  O  GLU A 270   N  VAL A 267           
SHEET    1  AF 5 GLY A 312  MET A 316  0                                        
SHEET    2  AF 5 VAL A 302  SER A 309 -1  O  GLU A 305   N  MET A 316           
SHEET    3  AF 5 ASN A 290  THR A 295 -1  O  TRP A 291   N  PHE A 306           
SHEET    4  AF 5 GLY A 283  TYR A 287 -1  O  GLY A 283   N  MET A 294           
SHEET    5  AF 5 LEU A 335  THR A 337  1  O  LEU A 335   N  LYS A 286           
LINK         N   DGL A1343                 C   ALA A2342     1555   1555  1.37  
LINK         N   ALA A2342                 C10 AMV B   1     1555   1555  1.37  
LINK         N   ALA A2346                 C10 AMV C   1     1555   1555  1.37  
LINK         O4  AMV B   1                 C1  NAG B   2     1555   1555  1.43  
LINK         O4  AMV C   1                 C1  NAG C   2     1555   1555  1.43  
CISPEP   1 ASN A  179    PRO A  180          0         1.32                     
CRYST1   80.230   95.590  129.270  90.00  90.00  90.00 C 2 2 21      8          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      0.012464  0.000000  0.000000        0.00000                         
SCALE2      0.000000  0.010461  0.000000        0.00000                         
SCALE3      0.000000  0.000000  0.007736        0.00000