data_2JAF # _entry.id 2JAF # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2JAF pdb_00002jaf 10.2210/pdb2jaf/pdb PDBE EBI-30649 ? ? WWPDB D_1290030649 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2006-12-14 2 'Structure model' 1 1 2011-12-28 3 'Structure model' 1 2 2018-11-21 4 'Structure model' 1 3 2019-05-22 5 'Structure model' 1 4 2020-07-29 6 'Structure model' 1 5 2023-12-13 7 'Structure model' 1 6 2024-11-20 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 5 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 2 'Structure model' 'Derived calculations' 3 2 'Structure model' 'Non-polymer description' 4 2 'Structure model' Other 5 2 'Structure model' 'Refinement description' 6 2 'Structure model' 'Version format compliance' 7 3 'Structure model' 'Data collection' 8 3 'Structure model' 'Database references' 9 3 'Structure model' 'Source and taxonomy' 10 3 'Structure model' 'Structure summary' 11 4 'Structure model' 'Data collection' 12 4 'Structure model' 'Derived calculations' 13 4 'Structure model' 'Experimental preparation' 14 5 'Structure model' 'Data collection' 15 5 'Structure model' 'Derived calculations' 16 5 'Structure model' 'Structure summary' 17 6 'Structure model' 'Data collection' 18 6 'Structure model' 'Database references' 19 6 'Structure model' 'Refinement description' 20 6 'Structure model' 'Structure summary' 21 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' citation 2 3 'Structure model' entity 3 3 'Structure model' entity_src_gen 4 3 'Structure model' entity_src_nat 5 3 'Structure model' struct_ref 6 3 'Structure model' struct_ref_seq 7 3 'Structure model' struct_ref_seq_dif 8 4 'Structure model' exptl_crystal_grow 9 4 'Structure model' struct_conn 10 5 'Structure model' chem_comp 11 5 'Structure model' entity 12 5 'Structure model' pdbx_chem_comp_identifier 13 5 'Structure model' pdbx_entity_nonpoly 14 5 'Structure model' struct_site 15 5 'Structure model' struct_site_gen 16 6 'Structure model' chem_comp 17 6 'Structure model' chem_comp_atom 18 6 'Structure model' chem_comp_bond 19 6 'Structure model' database_2 20 6 'Structure model' pdbx_initial_refinement_model 21 7 'Structure model' pdbx_entry_details 22 7 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_citation.journal_abbrev' 2 3 'Structure model' '_citation.page_last' 3 3 'Structure model' '_citation.title' 4 3 'Structure model' '_entity.pdbx_description' 5 3 'Structure model' '_entity.pdbx_mutation' 6 3 'Structure model' '_entity.src_method' 7 3 'Structure model' '_struct_ref.db_code' 8 3 'Structure model' '_struct_ref.pdbx_align_begin' 9 3 'Structure model' '_struct_ref.pdbx_db_accession' 10 3 'Structure model' '_struct_ref.pdbx_seq_one_letter_code' 11 3 'Structure model' '_struct_ref_seq.pdbx_db_accession' 12 3 'Structure model' '_struct_ref_seq_dif.pdbx_seq_db_accession_code' 13 4 'Structure model' '_exptl_crystal_grow.method' 14 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 15 5 'Structure model' '_chem_comp.mon_nstd_flag' 16 5 'Structure model' '_chem_comp.name' 17 5 'Structure model' '_chem_comp.type' 18 5 'Structure model' '_entity.pdbx_description' 19 5 'Structure model' '_pdbx_entity_nonpoly.name' 20 6 'Structure model' '_chem_comp.pdbx_synonyms' 21 6 'Structure model' '_database_2.pdbx_DOI' 22 6 'Structure model' '_database_2.pdbx_database_accession' 23 7 'Structure model' '_pdbx_entry_details.has_protein_modification' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2JAF _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2006-11-28 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1E12 unspecified 'HALORHODOPSIN, A LIGHT-DRIVEN CHLORIDE PUMP' PDB 2JAG unspecified 'GROUND STATE AND L1 INTERMEDIATE OF HALORHODOPSIN' # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Gmelin, W.' 1 'Zeth, K.' 2 'Efremov, R.' 3 'Heberle, J.' 4 'Tittor, J.' 5 'Oesterhelt, D.' 6 # _citation.id primary _citation.title 'The crystal structure of the L1 intermediate of halorhodopsin at 1.9 angstroms resolution.' _citation.journal_abbrev 'Photochem. Photobiol.' _citation.journal_volume 83 _citation.page_first 369 _citation.page_last 377 _citation.year 2007 _citation.journal_id_ASTM PHCBAP _citation.country US _citation.journal_id_ISSN 0031-8655 _citation.journal_id_CSD 0568 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 17117890 _citation.pdbx_database_id_DOI 10.1562/2006-06-23-RA-947 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Gmelin, W.' 1 ? primary 'Zeth, K.' 2 ? primary 'Efremov, R.' 3 ? primary 'Heberle, J.' 4 ? primary 'Tittor, J.' 5 ? primary 'Oesterhelt, D.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Halorhodopsin 28856.814 1 ? T203V ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 3 non-polymer syn 'PALMITIC ACID' 256.424 2 ? ? ? ? 4 non-polymer man 'octyl beta-D-glucopyranoside' 292.369 1 ? ? ? ? 5 non-polymer syn RETINAL 284.436 1 ? ? ? ? 6 water nat water 18.015 67 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name HR # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MSITSVPGVVDAGVLGAQSAAAVRENALLSSSLWVNVALAGIAILVFVYMGRTIRPGRPRLIWGATLMIPLVSISSYLGL LSGLTVGMIEMPAGHALAGEMVRSQWGRYLTWALSTPMILLALGLLADVDLGSLFTVIAADIGMCVTGLAAAMTTSALLF RWAFYAISCAFFVVVLSALVTDWAASASSAGTAEIFDTLRVLVVVLWLGYPIVWAVGVEGLALVQSVGATSWAYSVLDVF AKYVFAFILLRWVANNERTVAVAGQTLGTMSSDD ; _entity_poly.pdbx_seq_one_letter_code_can ;MSITSVPGVVDAGVLGAQSAAAVRENALLSSSLWVNVALAGIAILVFVYMGRTIRPGRPRLIWGATLMIPLVSISSYLGL LSGLTVGMIEMPAGHALAGEMVRSQWGRYLTWALSTPMILLALGLLADVDLGSLFTVIAADIGMCVTGLAAAMTTSALLF RWAFYAISCAFFVVVLSALVTDWAASASSAGTAEIFDTLRVLVVVLWLGYPIVWAVGVEGLALVQSVGATSWAYSVLDVF AKYVFAFILLRWVANNERTVAVAGQTLGTMSSDD ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 'PALMITIC ACID' PLM 4 'octyl beta-D-glucopyranoside' BOG 5 RETINAL RET 6 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 SER n 1 3 ILE n 1 4 THR n 1 5 SER n 1 6 VAL n 1 7 PRO n 1 8 GLY n 1 9 VAL n 1 10 VAL n 1 11 ASP n 1 12 ALA n 1 13 GLY n 1 14 VAL n 1 15 LEU n 1 16 GLY n 1 17 ALA n 1 18 GLN n 1 19 SER n 1 20 ALA n 1 21 ALA n 1 22 ALA n 1 23 VAL n 1 24 ARG n 1 25 GLU n 1 26 ASN n 1 27 ALA n 1 28 LEU n 1 29 LEU n 1 30 SER n 1 31 SER n 1 32 SER n 1 33 LEU n 1 34 TRP n 1 35 VAL n 1 36 ASN n 1 37 VAL n 1 38 ALA n 1 39 LEU n 1 40 ALA n 1 41 GLY n 1 42 ILE n 1 43 ALA n 1 44 ILE n 1 45 LEU n 1 46 VAL n 1 47 PHE n 1 48 VAL n 1 49 TYR n 1 50 MET n 1 51 GLY n 1 52 ARG n 1 53 THR n 1 54 ILE n 1 55 ARG n 1 56 PRO n 1 57 GLY n 1 58 ARG n 1 59 PRO n 1 60 ARG n 1 61 LEU n 1 62 ILE n 1 63 TRP n 1 64 GLY n 1 65 ALA n 1 66 THR n 1 67 LEU n 1 68 MET n 1 69 ILE n 1 70 PRO n 1 71 LEU n 1 72 VAL n 1 73 SER n 1 74 ILE n 1 75 SER n 1 76 SER n 1 77 TYR n 1 78 LEU n 1 79 GLY n 1 80 LEU n 1 81 LEU n 1 82 SER n 1 83 GLY n 1 84 LEU n 1 85 THR n 1 86 VAL n 1 87 GLY n 1 88 MET n 1 89 ILE n 1 90 GLU n 1 91 MET n 1 92 PRO n 1 93 ALA n 1 94 GLY n 1 95 HIS n 1 96 ALA n 1 97 LEU n 1 98 ALA n 1 99 GLY n 1 100 GLU n 1 101 MET n 1 102 VAL n 1 103 ARG n 1 104 SER n 1 105 GLN n 1 106 TRP n 1 107 GLY n 1 108 ARG n 1 109 TYR n 1 110 LEU n 1 111 THR n 1 112 TRP n 1 113 ALA n 1 114 LEU n 1 115 SER n 1 116 THR n 1 117 PRO n 1 118 MET n 1 119 ILE n 1 120 LEU n 1 121 LEU n 1 122 ALA n 1 123 LEU n 1 124 GLY n 1 125 LEU n 1 126 LEU n 1 127 ALA n 1 128 ASP n 1 129 VAL n 1 130 ASP n 1 131 LEU n 1 132 GLY n 1 133 SER n 1 134 LEU n 1 135 PHE n 1 136 THR n 1 137 VAL n 1 138 ILE n 1 139 ALA n 1 140 ALA n 1 141 ASP n 1 142 ILE n 1 143 GLY n 1 144 MET n 1 145 CYS n 1 146 VAL n 1 147 THR n 1 148 GLY n 1 149 LEU n 1 150 ALA n 1 151 ALA n 1 152 ALA n 1 153 MET n 1 154 THR n 1 155 THR n 1 156 SER n 1 157 ALA n 1 158 LEU n 1 159 LEU n 1 160 PHE n 1 161 ARG n 1 162 TRP n 1 163 ALA n 1 164 PHE n 1 165 TYR n 1 166 ALA n 1 167 ILE n 1 168 SER n 1 169 CYS n 1 170 ALA n 1 171 PHE n 1 172 PHE n 1 173 VAL n 1 174 VAL n 1 175 VAL n 1 176 LEU n 1 177 SER n 1 178 ALA n 1 179 LEU n 1 180 VAL n 1 181 THR n 1 182 ASP n 1 183 TRP n 1 184 ALA n 1 185 ALA n 1 186 SER n 1 187 ALA n 1 188 SER n 1 189 SER n 1 190 ALA n 1 191 GLY n 1 192 THR n 1 193 ALA n 1 194 GLU n 1 195 ILE n 1 196 PHE n 1 197 ASP n 1 198 THR n 1 199 LEU n 1 200 ARG n 1 201 VAL n 1 202 LEU n 1 203 VAL n 1 204 VAL n 1 205 VAL n 1 206 LEU n 1 207 TRP n 1 208 LEU n 1 209 GLY n 1 210 TYR n 1 211 PRO n 1 212 ILE n 1 213 VAL n 1 214 TRP n 1 215 ALA n 1 216 VAL n 1 217 GLY n 1 218 VAL n 1 219 GLU n 1 220 GLY n 1 221 LEU n 1 222 ALA n 1 223 LEU n 1 224 VAL n 1 225 GLN n 1 226 SER n 1 227 VAL n 1 228 GLY n 1 229 ALA n 1 230 THR n 1 231 SER n 1 232 TRP n 1 233 ALA n 1 234 TYR n 1 235 SER n 1 236 VAL n 1 237 LEU n 1 238 ASP n 1 239 VAL n 1 240 PHE n 1 241 ALA n 1 242 LYS n 1 243 TYR n 1 244 VAL n 1 245 PHE n 1 246 ALA n 1 247 PHE n 1 248 ILE n 1 249 LEU n 1 250 LEU n 1 251 ARG n 1 252 TRP n 1 253 VAL n 1 254 ALA n 1 255 ASN n 1 256 ASN n 1 257 GLU n 1 258 ARG n 1 259 THR n 1 260 VAL n 1 261 ALA n 1 262 VAL n 1 263 ALA n 1 264 GLY n 1 265 GLN n 1 266 THR n 1 267 LEU n 1 268 GLY n 1 269 THR n 1 270 MET n 1 271 SER n 1 272 SER n 1 273 ASP n 1 274 ASP n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type 'Biological sequence' _entity_src_gen.pdbx_beg_seq_num 1 _entity_src_gen.pdbx_end_seq_num 274 _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'hop, OE_1299R' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 478009 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Halobacterium salinarum (strain ATCC 29341 / DSM 671 / R1)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 478009 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description 'DSM 671' # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BOG D-saccharide n 'octyl beta-D-glucopyranoside' 'Beta-Octylglucoside; octyl beta-D-glucoside; octyl D-glucoside; octyl glucoside' 'C14 H28 O6' 292.369 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PLM non-polymer . 'PALMITIC ACID' ? 'C16 H32 O2' 256.424 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RET non-polymer . RETINAL ? 'C20 H28 O' 284.436 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _pdbx_chem_comp_identifier.comp_id BOG _pdbx_chem_comp_identifier.type 'IUPAC CARBOHYDRATE SYMBOL' _pdbx_chem_comp_identifier.program PDB-CARE _pdbx_chem_comp_identifier.program_version 1.0 _pdbx_chem_comp_identifier.identifier b-octylglucoside # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 ? ? ? A . n A 1 2 SER 2 2 ? ? ? A . n A 1 3 ILE 3 3 ? ? ? A . n A 1 4 THR 4 4 ? ? ? A . n A 1 5 SER 5 5 ? ? ? A . n A 1 6 VAL 6 6 ? ? ? A . n A 1 7 PRO 7 7 ? ? ? A . n A 1 8 GLY 8 8 ? ? ? A . n A 1 9 VAL 9 9 ? ? ? A . n A 1 10 VAL 10 10 ? ? ? A . n A 1 11 ASP 11 11 ? ? ? A . n A 1 12 ALA 12 12 ? ? ? A . n A 1 13 GLY 13 13 ? ? ? A . n A 1 14 VAL 14 14 ? ? ? A . n A 1 15 LEU 15 15 ? ? ? A . n A 1 16 GLY 16 16 ? ? ? A . n A 1 17 ALA 17 17 ? ? ? A . n A 1 18 GLN 18 18 ? ? ? A . n A 1 19 SER 19 19 ? ? ? A . n A 1 20 ALA 20 20 ? ? ? A . n A 1 21 ALA 21 21 ? ? ? A . n A 1 22 ALA 22 22 22 ALA ALA A . n A 1 23 VAL 23 23 23 VAL VAL A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 GLU 25 25 25 GLU GLU A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 ALA 27 27 27 ALA ALA A . n A 1 28 LEU 28 28 28 LEU LEU A . n A 1 29 LEU 29 29 29 LEU LEU A . n A 1 30 SER 30 30 30 SER SER A . n A 1 31 SER 31 31 31 SER SER A . n A 1 32 SER 32 32 32 SER SER A . n A 1 33 LEU 33 33 33 LEU LEU A . n A 1 34 TRP 34 34 34 TRP TRP A . n A 1 35 VAL 35 35 35 VAL VAL A . n A 1 36 ASN 36 36 36 ASN ASN A . n A 1 37 VAL 37 37 37 VAL VAL A . n A 1 38 ALA 38 38 38 ALA ALA A . n A 1 39 LEU 39 39 39 LEU LEU A . n A 1 40 ALA 40 40 40 ALA ALA A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 ILE 42 42 42 ILE ILE A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 LEU 45 45 45 LEU LEU A . n A 1 46 VAL 46 46 46 VAL VAL A . n A 1 47 PHE 47 47 47 PHE PHE A . n A 1 48 VAL 48 48 48 VAL VAL A . n A 1 49 TYR 49 49 49 TYR TYR A . n A 1 50 MET 50 50 50 MET MET A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ARG 52 52 52 ARG ARG A . n A 1 53 THR 53 53 53 THR THR A . n A 1 54 ILE 54 54 54 ILE ILE A . n A 1 55 ARG 55 55 55 ARG ARG A . n A 1 56 PRO 56 56 56 PRO PRO A . n A 1 57 GLY 57 57 57 GLY GLY A . n A 1 58 ARG 58 58 58 ARG ARG A . n A 1 59 PRO 59 59 59 PRO PRO A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 LEU 61 61 61 LEU LEU A . n A 1 62 ILE 62 62 62 ILE ILE A . n A 1 63 TRP 63 63 63 TRP TRP A . n A 1 64 GLY 64 64 64 GLY GLY A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 MET 68 68 68 MET MET A . n A 1 69 ILE 69 69 69 ILE ILE A . n A 1 70 PRO 70 70 70 PRO PRO A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 VAL 72 72 72 VAL VAL A . n A 1 73 SER 73 73 73 SER SER A . n A 1 74 ILE 74 74 74 ILE ILE A . n A 1 75 SER 75 75 75 SER SER A . n A 1 76 SER 76 76 76 SER SER A . n A 1 77 TYR 77 77 77 TYR TYR A . n A 1 78 LEU 78 78 78 LEU LEU A . n A 1 79 GLY 79 79 79 GLY GLY A . n A 1 80 LEU 80 80 80 LEU LEU A . n A 1 81 LEU 81 81 81 LEU LEU A . n A 1 82 SER 82 82 82 SER SER A . n A 1 83 GLY 83 83 83 GLY GLY A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 THR 85 85 85 THR THR A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 GLY 87 87 87 GLY GLY A . n A 1 88 MET 88 88 88 MET MET A . n A 1 89 ILE 89 89 89 ILE ILE A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 MET 91 91 91 MET MET A . n A 1 92 PRO 92 92 92 PRO PRO A . n A 1 93 ALA 93 93 93 ALA ALA A . n A 1 94 GLY 94 94 94 GLY GLY A . n A 1 95 HIS 95 95 95 HIS HIS A . n A 1 96 ALA 96 96 96 ALA ALA A . n A 1 97 LEU 97 97 97 LEU LEU A . n A 1 98 ALA 98 98 98 ALA ALA A . n A 1 99 GLY 99 99 99 GLY GLY A . n A 1 100 GLU 100 100 100 GLU GLU A . n A 1 101 MET 101 101 101 MET MET A . n A 1 102 VAL 102 102 102 VAL VAL A . n A 1 103 ARG 103 103 103 ARG ARG A . n A 1 104 SER 104 104 104 SER SER A . n A 1 105 GLN 105 105 105 GLN GLN A . n A 1 106 TRP 106 106 106 TRP TRP A . n A 1 107 GLY 107 107 107 GLY GLY A . n A 1 108 ARG 108 108 108 ARG ARG A . n A 1 109 TYR 109 109 109 TYR TYR A . n A 1 110 LEU 110 110 110 LEU LEU A . n A 1 111 THR 111 111 111 THR THR A . n A 1 112 TRP 112 112 112 TRP TRP A . n A 1 113 ALA 113 113 113 ALA ALA A . n A 1 114 LEU 114 114 114 LEU LEU A . n A 1 115 SER 115 115 115 SER SER A . n A 1 116 THR 116 116 116 THR THR A . n A 1 117 PRO 117 117 117 PRO PRO A . n A 1 118 MET 118 118 118 MET MET A . n A 1 119 ILE 119 119 119 ILE ILE A . n A 1 120 LEU 120 120 120 LEU LEU A . n A 1 121 LEU 121 121 121 LEU LEU A . n A 1 122 ALA 122 122 122 ALA ALA A . n A 1 123 LEU 123 123 123 LEU LEU A . n A 1 124 GLY 124 124 124 GLY GLY A . n A 1 125 LEU 125 125 125 LEU LEU A . n A 1 126 LEU 126 126 126 LEU LEU A . n A 1 127 ALA 127 127 127 ALA ALA A . n A 1 128 ASP 128 128 128 ASP ASP A . n A 1 129 VAL 129 129 129 VAL VAL A . n A 1 130 ASP 130 130 130 ASP ASP A . n A 1 131 LEU 131 131 131 LEU LEU A . n A 1 132 GLY 132 132 132 GLY GLY A . n A 1 133 SER 133 133 133 SER SER A . n A 1 134 LEU 134 134 134 LEU LEU A . n A 1 135 PHE 135 135 135 PHE PHE A . n A 1 136 THR 136 136 136 THR THR A . n A 1 137 VAL 137 137 137 VAL VAL A . n A 1 138 ILE 138 138 138 ILE ILE A . n A 1 139 ALA 139 139 139 ALA ALA A . n A 1 140 ALA 140 140 140 ALA ALA A . n A 1 141 ASP 141 141 141 ASP ASP A . n A 1 142 ILE 142 142 142 ILE ILE A . n A 1 143 GLY 143 143 143 GLY GLY A . n A 1 144 MET 144 144 144 MET MET A . n A 1 145 CYS 145 145 145 CYS CYS A . n A 1 146 VAL 146 146 146 VAL VAL A . n A 1 147 THR 147 147 147 THR THR A . n A 1 148 GLY 148 148 148 GLY GLY A . n A 1 149 LEU 149 149 149 LEU LEU A . n A 1 150 ALA 150 150 150 ALA ALA A . n A 1 151 ALA 151 151 151 ALA ALA A . n A 1 152 ALA 152 152 152 ALA ALA A . n A 1 153 MET 153 153 153 MET MET A . n A 1 154 THR 154 154 154 THR THR A . n A 1 155 THR 155 155 155 THR THR A . n A 1 156 SER 156 156 156 SER SER A . n A 1 157 ALA 157 157 157 ALA ALA A . n A 1 158 LEU 158 158 158 LEU LEU A . n A 1 159 LEU 159 159 159 LEU LEU A . n A 1 160 PHE 160 160 160 PHE PHE A . n A 1 161 ARG 161 161 161 ARG ARG A . n A 1 162 TRP 162 162 162 TRP TRP A . n A 1 163 ALA 163 163 163 ALA ALA A . n A 1 164 PHE 164 164 164 PHE PHE A . n A 1 165 TYR 165 165 165 TYR TYR A . n A 1 166 ALA 166 166 166 ALA ALA A . n A 1 167 ILE 167 167 167 ILE ILE A . n A 1 168 SER 168 168 168 SER SER A . n A 1 169 CYS 169 169 169 CYS CYS A . n A 1 170 ALA 170 170 170 ALA ALA A . n A 1 171 PHE 171 171 171 PHE PHE A . n A 1 172 PHE 172 172 172 PHE PHE A . n A 1 173 VAL 173 173 173 VAL VAL A . n A 1 174 VAL 174 174 174 VAL VAL A . n A 1 175 VAL 175 175 175 VAL VAL A . n A 1 176 LEU 176 176 176 LEU LEU A . n A 1 177 SER 177 177 177 SER SER A . n A 1 178 ALA 178 178 178 ALA ALA A . n A 1 179 LEU 179 179 179 LEU LEU A . n A 1 180 VAL 180 180 180 VAL VAL A . n A 1 181 THR 181 181 181 THR THR A . n A 1 182 ASP 182 182 182 ASP ASP A . n A 1 183 TRP 183 183 183 TRP TRP A . n A 1 184 ALA 184 184 184 ALA ALA A . n A 1 185 ALA 185 185 185 ALA ALA A . n A 1 186 SER 186 186 186 SER SER A . n A 1 187 ALA 187 187 187 ALA ALA A . n A 1 188 SER 188 188 188 SER SER A . n A 1 189 SER 189 189 189 SER SER A . n A 1 190 ALA 190 190 190 ALA ALA A . n A 1 191 GLY 191 191 191 GLY GLY A . n A 1 192 THR 192 192 192 THR THR A . n A 1 193 ALA 193 193 193 ALA ALA A . n A 1 194 GLU 194 194 194 GLU GLU A . n A 1 195 ILE 195 195 195 ILE ILE A . n A 1 196 PHE 196 196 196 PHE PHE A . n A 1 197 ASP 197 197 197 ASP ASP A . n A 1 198 THR 198 198 198 THR THR A . n A 1 199 LEU 199 199 199 LEU LEU A . n A 1 200 ARG 200 200 200 ARG ARG A . n A 1 201 VAL 201 201 201 VAL VAL A . n A 1 202 LEU 202 202 202 LEU LEU A . n A 1 203 VAL 203 203 203 VAL VAL A . n A 1 204 VAL 204 204 204 VAL VAL A . n A 1 205 VAL 205 205 205 VAL VAL A . n A 1 206 LEU 206 206 206 LEU LEU A . n A 1 207 TRP 207 207 207 TRP TRP A . n A 1 208 LEU 208 208 208 LEU LEU A . n A 1 209 GLY 209 209 209 GLY GLY A . n A 1 210 TYR 210 210 210 TYR TYR A . n A 1 211 PRO 211 211 211 PRO PRO A . n A 1 212 ILE 212 212 212 ILE ILE A . n A 1 213 VAL 213 213 213 VAL VAL A . n A 1 214 TRP 214 214 214 TRP TRP A . n A 1 215 ALA 215 215 215 ALA ALA A . n A 1 216 VAL 216 216 216 VAL VAL A . n A 1 217 GLY 217 217 217 GLY GLY A . n A 1 218 VAL 218 218 218 VAL VAL A . n A 1 219 GLU 219 219 219 GLU GLU A . n A 1 220 GLY 220 220 220 GLY GLY A . n A 1 221 LEU 221 221 221 LEU LEU A . n A 1 222 ALA 222 222 222 ALA ALA A . n A 1 223 LEU 223 223 223 LEU LEU A . n A 1 224 VAL 224 224 224 VAL VAL A . n A 1 225 GLN 225 225 225 GLN GLN A . n A 1 226 SER 226 226 226 SER SER A . n A 1 227 VAL 227 227 227 VAL VAL A . n A 1 228 GLY 228 228 228 GLY GLY A . n A 1 229 ALA 229 229 229 ALA ALA A . n A 1 230 THR 230 230 230 THR THR A . n A 1 231 SER 231 231 231 SER SER A . n A 1 232 TRP 232 232 232 TRP TRP A . n A 1 233 ALA 233 233 233 ALA ALA A . n A 1 234 TYR 234 234 234 TYR TYR A . n A 1 235 SER 235 235 235 SER SER A . n A 1 236 VAL 236 236 236 VAL VAL A . n A 1 237 LEU 237 237 237 LEU LEU A . n A 1 238 ASP 238 238 238 ASP ASP A . n A 1 239 VAL 239 239 239 VAL VAL A . n A 1 240 PHE 240 240 240 PHE PHE A . n A 1 241 ALA 241 241 241 ALA ALA A . n A 1 242 LYS 242 242 242 LYS LYS A . n A 1 243 TYR 243 243 243 TYR TYR A . n A 1 244 VAL 244 244 244 VAL VAL A . n A 1 245 PHE 245 245 245 PHE PHE A . n A 1 246 ALA 246 246 246 ALA ALA A . n A 1 247 PHE 247 247 247 PHE PHE A . n A 1 248 ILE 248 248 248 ILE ILE A . n A 1 249 LEU 249 249 249 LEU LEU A . n A 1 250 LEU 250 250 250 LEU LEU A . n A 1 251 ARG 251 251 251 ARG ARG A . n A 1 252 TRP 252 252 252 TRP TRP A . n A 1 253 VAL 253 253 253 VAL VAL A . n A 1 254 ALA 254 254 254 ALA ALA A . n A 1 255 ASN 255 255 255 ASN ASN A . n A 1 256 ASN 256 256 256 ASN ASN A . n A 1 257 GLU 257 257 257 GLU GLU A . n A 1 258 ARG 258 258 258 ARG ARG A . n A 1 259 THR 259 259 259 THR THR A . n A 1 260 VAL 260 260 260 VAL VAL A . n A 1 261 ALA 261 261 261 ALA ALA A . n A 1 262 VAL 262 262 262 VAL VAL A . n A 1 263 ALA 263 263 263 ALA ALA A . n A 1 264 GLY 264 264 ? ? ? A . n A 1 265 GLN 265 265 ? ? ? A . n A 1 266 THR 266 266 ? ? ? A . n A 1 267 LEU 267 267 ? ? ? A . n A 1 268 GLY 268 268 ? ? ? A . n A 1 269 THR 269 269 ? ? ? A . n A 1 270 MET 270 270 ? ? ? A . n A 1 271 SER 271 271 ? ? ? A . n A 1 272 SER 272 272 ? ? ? A . n A 1 273 ASP 273 273 ? ? ? A . n A 1 274 ASP 274 274 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 501 501 CL CL A . C 2 CL 1 502 502 CL CL A . D 3 PLM 1 700 700 PLM PLM A . E 3 PLM 1 701 701 PLM PLM A . F 4 BOG 1 801 801 BOG BOG A . G 5 RET 1 900 900 RET RET A . H 6 HOH 1 2001 2001 HOH HOH A . H 6 HOH 2 2002 2002 HOH HOH A . H 6 HOH 3 2003 2003 HOH HOH A . H 6 HOH 4 2004 2004 HOH HOH A . H 6 HOH 5 2005 2005 HOH HOH A . H 6 HOH 6 2006 2006 HOH HOH A . H 6 HOH 7 2007 2007 HOH HOH A . H 6 HOH 8 2008 2008 HOH HOH A . H 6 HOH 9 2009 2009 HOH HOH A . H 6 HOH 10 2010 2010 HOH HOH A . H 6 HOH 11 2011 2011 HOH HOH A . H 6 HOH 12 2012 2012 HOH HOH A . H 6 HOH 13 2013 2013 HOH HOH A . H 6 HOH 14 2014 2014 HOH HOH A . H 6 HOH 15 2015 2015 HOH HOH A . H 6 HOH 16 2016 2016 HOH HOH A . H 6 HOH 17 2017 2017 HOH HOH A . H 6 HOH 18 2018 2018 HOH HOH A . H 6 HOH 19 2019 2019 HOH HOH A . H 6 HOH 20 2020 2020 HOH HOH A . H 6 HOH 21 2021 2021 HOH HOH A . H 6 HOH 22 2022 2022 HOH HOH A . H 6 HOH 23 2023 2023 HOH HOH A . H 6 HOH 24 2024 2024 HOH HOH A . H 6 HOH 25 2025 2025 HOH HOH A . H 6 HOH 26 2026 2026 HOH HOH A . H 6 HOH 27 2027 2027 HOH HOH A . H 6 HOH 28 2028 2028 HOH HOH A . H 6 HOH 29 2029 2029 HOH HOH A . H 6 HOH 30 2030 2030 HOH HOH A . H 6 HOH 31 2031 2031 HOH HOH A . H 6 HOH 32 2032 2032 HOH HOH A . H 6 HOH 33 2033 2033 HOH HOH A . H 6 HOH 34 2034 2034 HOH HOH A . H 6 HOH 35 2035 2035 HOH HOH A . H 6 HOH 36 2036 2036 HOH HOH A . H 6 HOH 37 2037 2037 HOH HOH A . H 6 HOH 38 2038 2038 HOH HOH A . H 6 HOH 39 2039 2039 HOH HOH A . H 6 HOH 40 2040 2040 HOH HOH A . H 6 HOH 41 2041 2041 HOH HOH A . H 6 HOH 42 2042 2042 HOH HOH A . H 6 HOH 43 2043 2043 HOH HOH A . H 6 HOH 44 2044 2044 HOH HOH A . H 6 HOH 45 2045 2045 HOH HOH A . H 6 HOH 46 2046 2046 HOH HOH A . H 6 HOH 47 2047 2047 HOH HOH A . H 6 HOH 48 2048 2048 HOH HOH A . H 6 HOH 49 2049 2049 HOH HOH A . H 6 HOH 50 2050 2050 HOH HOH A . H 6 HOH 51 2051 2051 HOH HOH A . H 6 HOH 52 2052 2052 HOH HOH A . H 6 HOH 53 2053 2053 HOH HOH A . H 6 HOH 54 2054 2054 HOH HOH A . H 6 HOH 55 2055 2055 HOH HOH A . H 6 HOH 56 2056 2056 HOH HOH A . H 6 HOH 57 2057 2057 HOH HOH A . H 6 HOH 58 2058 2058 HOH HOH A . H 6 HOH 59 2059 2059 HOH HOH A . H 6 HOH 60 2060 2060 HOH HOH A . H 6 HOH 61 2061 2061 HOH HOH A . H 6 HOH 62 2062 2062 HOH HOH A . H 6 HOH 63 2063 2063 HOH HOH A . H 6 HOH 64 2064 2064 HOH HOH A . H 6 HOH 65 2065 2065 HOH HOH A . H 6 HOH 66 2066 2066 HOH HOH A . H 6 HOH 67 2067 2067 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language CNS refinement 1.1 ? 1 ? ? ? ? XDS 'data reduction' . ? 2 ? ? ? ? AMoRE phasing . ? 3 ? ? ? ? # _cell.entry_id 2JAF _cell.length_a 94.473 _cell.length_b 94.473 _cell.length_c 157.137 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 18 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2JAF _symmetry.space_group_name_H-M 'H 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 155 # _exptl.entry_id 2JAF _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.34 _exptl_crystal.density_percent_sol 47.40 _exptl_crystal.description ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'LIPIDIC CUBIC PHASE' _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH ? _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details 'CRYSTALLIZED IN A CUBIC LIPID PHASE MADE OF 58-62 W/V % 1-MONOOLEIN, 3.3 M KCL, 3.5 MG/ML HR AND 25 MM TRIS/HCL, PH 7, R.T.' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date ? _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9393 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-2 _diffrn_source.pdbx_wavelength 0.9393 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2JAF _reflns.observed_criterion_sigma_I 3.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.000 _reflns.d_resolution_high 1.600 _reflns.number_obs 35303 _reflns.number_all ? _reflns.percent_possible_obs 95.9 _reflns.pdbx_Rmerge_I_obs 0.14000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 24.9000 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 8.000 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high . _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all 89.5 _reflns_shell.Rmerge_I_obs 0.74000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.400 _reflns_shell.pdbx_redundancy 7.90 _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2JAF _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 35082 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 2.4 _refine.pdbx_data_cutoff_high_absF 10000 _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 20.0 _refine.ls_d_res_high 1.7 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.2380 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2380 _refine.ls_R_factor_R_free 0.2636 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.0 _refine.ls_number_reflns_R_free 1754 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] 1.349 _refine.aniso_B[2][2] 1.349 _refine.aniso_B[3][3] -2.699 _refine.aniso_B[1][2] 0.034 _refine.aniso_B[1][3] 0.000 _refine.aniso_B[2][3] 0.000 _refine.solvent_model_details ? _refine.solvent_model_param_ksol 0.388698 _refine.solvent_model_param_bsol 76.7206 _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details '3-10 HELIX DISTORTION BETWEEN LEU A 110 AND ALA A 113. PI-BULGE BETWEEN ALA A 178 AND TRP A 183 DISRUPTS HELIX E' _refine.pdbx_starting_model 'PDB ENTRY 1E12' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML ? _refine.pdbx_overall_phase_error ? _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1822 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 78 _refine_hist.number_atoms_solvent 67 _refine_hist.number_atoms_total 1967 _refine_hist.d_res_high 1.7 _refine_hist.d_res_low 20.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function c_bond_d 0.01 ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_bond_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg 1.2 ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_angle_deg_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_dihedral_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_na ? ? ? ? 'X-RAY DIFFRACTION' ? c_improper_angle_d_prot ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? c_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? # _database_PDB_matrix.entry_id 2JAF _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 2JAF _struct.title 'Ground state of halorhodopsin T203V' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2JAF _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text ;CHROMOPHORE, CHLORIDE PUMP, ION TRANSPORT, MEMBRANE, CHLORIDE, RECEPTOR, ION PUMP, TRANSPORT, SENSORY TRANSDUCTION, PHOTORECEPTOR PROTEIN, TRANSMEMBRANE, RETINAL PROTEIN, MEMBRANE PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 6 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BACH_HALS3 _struct_ref.pdbx_db_accession B0R2U4 _struct_ref.pdbx_db_isoform ? _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MSITSVPGVVDAGVLGAQSAAAVRENALLSSSLWVNVALAGIAILVFVYMGRTIRPGRPRLIWGATLMIPLVSISSYLGL LSGLTVGMIEMPAGHALAGEMVRSQWGRYLTWALSTPMILLALGLLADVDLGSLFTVIAADIGMCVTGLAAAMTTSALLF RWAFYAISCAFFVVVLSALVTDWAASASSAGTAEIFDTLRVLTVVLWLGYPIVWAVGVEGLALVQSVGVTSWAYSVLDVF AKYVFAFILLRWVANNERTVAVAGQTLGTMSSDD ; _struct_ref.pdbx_align_begin 1 # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2JAF _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 274 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession B0R2U4 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 274 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 274 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2JAF VAL A 203 ? UNP B0R2U4 THR 203 'engineered mutation' 203 1 1 2JAF ALA A 229 ? UNP B0R2U4 VAL 229 'engineered mutation' 229 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 10870 ? 1 MORE -159.0 ? 1 'SSA (A^2)' 26560 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -y+1,x-y,z -0.5000000000 -0.8660254038 0.0000000000 94.4730000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_665 -x+y+1,-x+1,z -0.5000000000 0.8660254038 0.0000000000 47.2365000000 -0.8660254038 -0.5000000000 0.0000000000 81.8160179717 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 26 ? GLY A 51 ? ASN A 26 GLY A 51 1 ? 26 HELX_P HELX_P2 2 GLY A 57 ? SER A 82 ? GLY A 57 SER A 82 1 ? 26 HELX_P HELX_P3 3 GLN A 105 ? ASP A 128 ? GLN A 105 ASP A 128 1 ? 24 HELX_P HELX_P4 4 ASP A 130 ? THR A 154 ? ASP A 130 THR A 154 1 ? 25 HELX_P HELX_P5 5 ALA A 157 ? THR A 181 ? ALA A 157 THR A 181 1 ? 25 HELX_P HELX_P6 6 THR A 181 ? ALA A 190 ? THR A 181 ALA A 190 1 ? 10 HELX_P HELX_P7 7 THR A 192 ? GLY A 217 ? THR A 192 GLY A 217 1 ? 26 HELX_P HELX_P8 8 SER A 226 ? LYS A 242 ? SER A 226 LYS A 242 1 ? 17 HELX_P HELX_P9 9 LYS A 242 ? ASN A 256 ? LYS A 242 ASN A 256 1 ? 15 HELX_P HELX_P10 10 ASN A 256 ? VAL A 262 ? ASN A 256 VAL A 262 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id covale1 _struct_conn.conn_type_id covale _struct_conn.pdbx_leaving_atom_flag one _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id LYS _struct_conn.ptnr1_label_seq_id 242 _struct_conn.ptnr1_label_atom_id NZ _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id G _struct_conn.ptnr2_label_comp_id RET _struct_conn.ptnr2_label_seq_id . _struct_conn.ptnr2_label_atom_id C15 _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id LYS _struct_conn.ptnr1_auth_seq_id 242 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id RET _struct_conn.ptnr2_auth_seq_id 900 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 1.304 _struct_conn.pdbx_value_order ? _struct_conn.pdbx_role ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id RET _pdbx_modification_feature.label_asym_id G _pdbx_modification_feature.label_seq_id . _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id LYS _pdbx_modification_feature.modified_residue_label_asym_id A _pdbx_modification_feature.modified_residue_label_seq_id 242 _pdbx_modification_feature.modified_residue_label_alt_id ? _pdbx_modification_feature.auth_comp_id RET _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 900 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id LYS _pdbx_modification_feature.modified_residue_auth_asym_id A _pdbx_modification_feature.modified_residue_auth_seq_id 242 _pdbx_modification_feature.modified_residue_PDB_ins_code ? _pdbx_modification_feature.modified_residue_symmetry 1_555 _pdbx_modification_feature.comp_id_linking_atom C15 _pdbx_modification_feature.modified_residue_id_linking_atom NZ _pdbx_modification_feature.modified_residue_id LYS _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id RET _pdbx_modification_feature.type Retinoylation _pdbx_modification_feature.category Lipid/lipid-like # _struct_sheet.id AA _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id AA _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLY A 87 ? GLU A 90 ? GLY A 87 GLU A 90 AA 2 MET A 101 ? SER A 104 ? MET A 101 SER A 104 # _pdbx_struct_sheet_hbond.sheet_id AA _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id ILE _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 89 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id ILE _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 89 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id VAL _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 102 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 102 # _pdbx_entry_details.entry_id 2JAF _pdbx_entry_details.compound_details ;ENGINEERED RESIDUE IN CHAIN A, THR 203 TO VAL ENGINEERED RESIDUE IN CHAIN A, VAL 229 TO ALA ; _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 THR A 181 ? ? -122.59 -104.42 2 1 ASN A 256 ? ? -142.20 38.74 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 1 ? A MET 1 2 1 Y 1 A SER 2 ? A SER 2 3 1 Y 1 A ILE 3 ? A ILE 3 4 1 Y 1 A THR 4 ? A THR 4 5 1 Y 1 A SER 5 ? A SER 5 6 1 Y 1 A VAL 6 ? A VAL 6 7 1 Y 1 A PRO 7 ? A PRO 7 8 1 Y 1 A GLY 8 ? A GLY 8 9 1 Y 1 A VAL 9 ? A VAL 9 10 1 Y 1 A VAL 10 ? A VAL 10 11 1 Y 1 A ASP 11 ? A ASP 11 12 1 Y 1 A ALA 12 ? A ALA 12 13 1 Y 1 A GLY 13 ? A GLY 13 14 1 Y 1 A VAL 14 ? A VAL 14 15 1 Y 1 A LEU 15 ? A LEU 15 16 1 Y 1 A GLY 16 ? A GLY 16 17 1 Y 1 A ALA 17 ? A ALA 17 18 1 Y 1 A GLN 18 ? A GLN 18 19 1 Y 1 A SER 19 ? A SER 19 20 1 Y 1 A ALA 20 ? A ALA 20 21 1 Y 1 A ALA 21 ? A ALA 21 22 1 Y 1 A GLY 264 ? A GLY 264 23 1 Y 1 A GLN 265 ? A GLN 265 24 1 Y 1 A THR 266 ? A THR 266 25 1 Y 1 A LEU 267 ? A LEU 267 26 1 Y 1 A GLY 268 ? A GLY 268 27 1 Y 1 A THR 269 ? A THR 269 28 1 Y 1 A MET 270 ? A MET 270 29 1 Y 1 A SER 271 ? A SER 271 30 1 Y 1 A SER 272 ? A SER 272 31 1 Y 1 A ASP 273 ? A ASP 273 32 1 Y 1 A ASP 274 ? A ASP 274 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BOG C1 C N R 74 BOG O1 O N N 75 BOG C2 C N R 76 BOG O2 O N N 77 BOG C3 C N S 78 BOG O3 O N N 79 BOG C4 C N S 80 BOG O4 O N N 81 BOG C5 C N R 82 BOG O5 O N N 83 BOG C6 C N N 84 BOG O6 O N N 85 BOG "C1'" C N N 86 BOG "C2'" C N N 87 BOG "C3'" C N N 88 BOG "C4'" C N N 89 BOG "C5'" C N N 90 BOG "C6'" C N N 91 BOG "C7'" C N N 92 BOG "C8'" C N N 93 BOG H1 H N N 94 BOG H2 H N N 95 BOG HO2 H N N 96 BOG H3 H N N 97 BOG HO3 H N N 98 BOG H4 H N N 99 BOG HO4 H N N 100 BOG H5 H N N 101 BOG H61 H N N 102 BOG H62 H N N 103 BOG HO6 H N N 104 BOG "H1'1" H N N 105 BOG "H1'2" H N N 106 BOG "H2'1" H N N 107 BOG "H2'2" H N N 108 BOG "H3'1" H N N 109 BOG "H3'2" H N N 110 BOG "H4'1" H N N 111 BOG "H4'2" H N N 112 BOG "H5'1" H N N 113 BOG "H5'2" H N N 114 BOG "H6'1" H N N 115 BOG "H6'2" H N N 116 BOG "H7'1" H N N 117 BOG "H7'2" H N N 118 BOG "H8'1" H N N 119 BOG "H8'2" H N N 120 BOG "H8'3" H N N 121 CL CL CL N N 122 CYS N N N N 123 CYS CA C N R 124 CYS C C N N 125 CYS O O N N 126 CYS CB C N N 127 CYS SG S N N 128 CYS OXT O N N 129 CYS H H N N 130 CYS H2 H N N 131 CYS HA H N N 132 CYS HB2 H N N 133 CYS HB3 H N N 134 CYS HG H N N 135 CYS HXT H N N 136 GLN N N N N 137 GLN CA C N S 138 GLN C C N N 139 GLN O O N N 140 GLN CB C N N 141 GLN CG C N N 142 GLN CD C N N 143 GLN OE1 O N N 144 GLN NE2 N N N 145 GLN OXT O N N 146 GLN H H N N 147 GLN H2 H N N 148 GLN HA H N N 149 GLN HB2 H N N 150 GLN HB3 H N N 151 GLN HG2 H N N 152 GLN HG3 H N N 153 GLN HE21 H N N 154 GLN HE22 H N N 155 GLN HXT H N N 156 GLU N N N N 157 GLU CA C N S 158 GLU C C N N 159 GLU O O N N 160 GLU CB C N N 161 GLU CG C N N 162 GLU CD C N N 163 GLU OE1 O N N 164 GLU OE2 O N N 165 GLU OXT O N N 166 GLU H H N N 167 GLU H2 H N N 168 GLU HA H N N 169 GLU HB2 H N N 170 GLU HB3 H N N 171 GLU HG2 H N N 172 GLU HG3 H N N 173 GLU HE2 H N N 174 GLU HXT H N N 175 GLY N N N N 176 GLY CA C N N 177 GLY C C N N 178 GLY O O N N 179 GLY OXT O N N 180 GLY H H N N 181 GLY H2 H N N 182 GLY HA2 H N N 183 GLY HA3 H N N 184 GLY HXT H N N 185 HIS N N N N 186 HIS CA C N S 187 HIS C C N N 188 HIS O O N N 189 HIS CB C N N 190 HIS CG C Y N 191 HIS ND1 N Y N 192 HIS CD2 C Y N 193 HIS CE1 C Y N 194 HIS NE2 N Y N 195 HIS OXT O N N 196 HIS H H N N 197 HIS H2 H N N 198 HIS HA H N N 199 HIS HB2 H N N 200 HIS HB3 H N N 201 HIS HD1 H N N 202 HIS HD2 H N N 203 HIS HE1 H N N 204 HIS HE2 H N N 205 HIS HXT H N N 206 HOH O O N N 207 HOH H1 H N N 208 HOH H2 H N N 209 ILE N N N N 210 ILE CA C N S 211 ILE C C N N 212 ILE O O N N 213 ILE CB C N S 214 ILE CG1 C N N 215 ILE CG2 C N N 216 ILE CD1 C N N 217 ILE OXT O N N 218 ILE H H N N 219 ILE H2 H N N 220 ILE HA H N N 221 ILE HB H N N 222 ILE HG12 H N N 223 ILE HG13 H N N 224 ILE HG21 H N N 225 ILE HG22 H N N 226 ILE HG23 H N N 227 ILE HD11 H N N 228 ILE HD12 H N N 229 ILE HD13 H N N 230 ILE HXT H N N 231 LEU N N N N 232 LEU CA C N S 233 LEU C C N N 234 LEU O O N N 235 LEU CB C N N 236 LEU CG C N N 237 LEU CD1 C N N 238 LEU CD2 C N N 239 LEU OXT O N N 240 LEU H H N N 241 LEU H2 H N N 242 LEU HA H N N 243 LEU HB2 H N N 244 LEU HB3 H N N 245 LEU HG H N N 246 LEU HD11 H N N 247 LEU HD12 H N N 248 LEU HD13 H N N 249 LEU HD21 H N N 250 LEU HD22 H N N 251 LEU HD23 H N N 252 LEU HXT H N N 253 LYS N N N N 254 LYS CA C N S 255 LYS C C N N 256 LYS O O N N 257 LYS CB C N N 258 LYS CG C N N 259 LYS CD C N N 260 LYS CE C N N 261 LYS NZ N N N 262 LYS OXT O N N 263 LYS H H N N 264 LYS H2 H N N 265 LYS HA H N N 266 LYS HB2 H N N 267 LYS HB3 H N N 268 LYS HG2 H N N 269 LYS HG3 H N N 270 LYS HD2 H N N 271 LYS HD3 H N N 272 LYS HE2 H N N 273 LYS HE3 H N N 274 LYS HZ1 H N N 275 LYS HZ2 H N N 276 LYS HZ3 H N N 277 LYS HXT H N N 278 MET N N N N 279 MET CA C N S 280 MET C C N N 281 MET O O N N 282 MET CB C N N 283 MET CG C N N 284 MET SD S N N 285 MET CE C N N 286 MET OXT O N N 287 MET H H N N 288 MET H2 H N N 289 MET HA H N N 290 MET HB2 H N N 291 MET HB3 H N N 292 MET HG2 H N N 293 MET HG3 H N N 294 MET HE1 H N N 295 MET HE2 H N N 296 MET HE3 H N N 297 MET HXT H N N 298 PHE N N N N 299 PHE CA C N S 300 PHE C C N N 301 PHE O O N N 302 PHE CB C N N 303 PHE CG C Y N 304 PHE CD1 C Y N 305 PHE CD2 C Y N 306 PHE CE1 C Y N 307 PHE CE2 C Y N 308 PHE CZ C Y N 309 PHE OXT O N N 310 PHE H H N N 311 PHE H2 H N N 312 PHE HA H N N 313 PHE HB2 H N N 314 PHE HB3 H N N 315 PHE HD1 H N N 316 PHE HD2 H N N 317 PHE HE1 H N N 318 PHE HE2 H N N 319 PHE HZ H N N 320 PHE HXT H N N 321 PLM C1 C N N 322 PLM O1 O N N 323 PLM O2 O N N 324 PLM C2 C N N 325 PLM C3 C N N 326 PLM C4 C N N 327 PLM C5 C N N 328 PLM C6 C N N 329 PLM C7 C N N 330 PLM C8 C N N 331 PLM C9 C N N 332 PLM CA C N N 333 PLM CB C N N 334 PLM CC C N N 335 PLM CD C N N 336 PLM CE C N N 337 PLM CF C N N 338 PLM CG C N N 339 PLM H H N N 340 PLM H21 H N N 341 PLM H22 H N N 342 PLM H31 H N N 343 PLM H32 H N N 344 PLM H41 H N N 345 PLM H42 H N N 346 PLM H51 H N N 347 PLM H52 H N N 348 PLM H61 H N N 349 PLM H62 H N N 350 PLM H71 H N N 351 PLM H72 H N N 352 PLM H81 H N N 353 PLM H82 H N N 354 PLM H91 H N N 355 PLM H92 H N N 356 PLM HA1 H N N 357 PLM HA2 H N N 358 PLM HB1 H N N 359 PLM HB2 H N N 360 PLM HC1 H N N 361 PLM HC2 H N N 362 PLM HD1 H N N 363 PLM HD2 H N N 364 PLM HE1 H N N 365 PLM HE2 H N N 366 PLM HF1 H N N 367 PLM HF2 H N N 368 PLM HG1 H N N 369 PLM HG2 H N N 370 PLM HG3 H N N 371 PRO N N N N 372 PRO CA C N S 373 PRO C C N N 374 PRO O O N N 375 PRO CB C N N 376 PRO CG C N N 377 PRO CD C N N 378 PRO OXT O N N 379 PRO H H N N 380 PRO HA H N N 381 PRO HB2 H N N 382 PRO HB3 H N N 383 PRO HG2 H N N 384 PRO HG3 H N N 385 PRO HD2 H N N 386 PRO HD3 H N N 387 PRO HXT H N N 388 RET C1 C N N 389 RET C2 C N N 390 RET C3 C N N 391 RET C4 C N N 392 RET C5 C N N 393 RET C6 C N N 394 RET C7 C N N 395 RET C8 C N N 396 RET C9 C N N 397 RET C10 C N N 398 RET C11 C N N 399 RET C12 C N N 400 RET C13 C N N 401 RET C14 C N N 402 RET C15 C N N 403 RET O1 O N N 404 RET C16 C N N 405 RET C17 C N N 406 RET C18 C N N 407 RET C19 C N N 408 RET C20 C N N 409 RET H21 H N N 410 RET H22 H N N 411 RET H31 H N N 412 RET H32 H N N 413 RET H41 H N N 414 RET H42 H N N 415 RET H7 H N N 416 RET H8 H N N 417 RET H10 H N N 418 RET H11 H N N 419 RET H12 H N N 420 RET H14 H N N 421 RET H15 H N N 422 RET H161 H N N 423 RET H162 H N N 424 RET H163 H N N 425 RET H171 H N N 426 RET H172 H N N 427 RET H173 H N N 428 RET H181 H N N 429 RET H182 H N N 430 RET H183 H N N 431 RET H191 H N N 432 RET H192 H N N 433 RET H193 H N N 434 RET H201 H N N 435 RET H202 H N N 436 RET H203 H N N 437 SER N N N N 438 SER CA C N S 439 SER C C N N 440 SER O O N N 441 SER CB C N N 442 SER OG O N N 443 SER OXT O N N 444 SER H H N N 445 SER H2 H N N 446 SER HA H N N 447 SER HB2 H N N 448 SER HB3 H N N 449 SER HG H N N 450 SER HXT H N N 451 THR N N N N 452 THR CA C N S 453 THR C C N N 454 THR O O N N 455 THR CB C N R 456 THR OG1 O N N 457 THR CG2 C N N 458 THR OXT O N N 459 THR H H N N 460 THR H2 H N N 461 THR HA H N N 462 THR HB H N N 463 THR HG1 H N N 464 THR HG21 H N N 465 THR HG22 H N N 466 THR HG23 H N N 467 THR HXT H N N 468 TRP N N N N 469 TRP CA C N S 470 TRP C C N N 471 TRP O O N N 472 TRP CB C N N 473 TRP CG C Y N 474 TRP CD1 C Y N 475 TRP CD2 C Y N 476 TRP NE1 N Y N 477 TRP CE2 C Y N 478 TRP CE3 C Y N 479 TRP CZ2 C Y N 480 TRP CZ3 C Y N 481 TRP CH2 C Y N 482 TRP OXT O N N 483 TRP H H N N 484 TRP H2 H N N 485 TRP HA H N N 486 TRP HB2 H N N 487 TRP HB3 H N N 488 TRP HD1 H N N 489 TRP HE1 H N N 490 TRP HE3 H N N 491 TRP HZ2 H N N 492 TRP HZ3 H N N 493 TRP HH2 H N N 494 TRP HXT H N N 495 TYR N N N N 496 TYR CA C N S 497 TYR C C N N 498 TYR O O N N 499 TYR CB C N N 500 TYR CG C Y N 501 TYR CD1 C Y N 502 TYR CD2 C Y N 503 TYR CE1 C Y N 504 TYR CE2 C Y N 505 TYR CZ C Y N 506 TYR OH O N N 507 TYR OXT O N N 508 TYR H H N N 509 TYR H2 H N N 510 TYR HA H N N 511 TYR HB2 H N N 512 TYR HB3 H N N 513 TYR HD1 H N N 514 TYR HD2 H N N 515 TYR HE1 H N N 516 TYR HE2 H N N 517 TYR HH H N N 518 TYR HXT H N N 519 VAL N N N N 520 VAL CA C N S 521 VAL C C N N 522 VAL O O N N 523 VAL CB C N N 524 VAL CG1 C N N 525 VAL CG2 C N N 526 VAL OXT O N N 527 VAL H H N N 528 VAL H2 H N N 529 VAL HA H N N 530 VAL HB H N N 531 VAL HG11 H N N 532 VAL HG12 H N N 533 VAL HG13 H N N 534 VAL HG21 H N N 535 VAL HG22 H N N 536 VAL HG23 H N N 537 VAL HXT H N N 538 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BOG C1 O1 sing N N 70 BOG C1 C2 sing N N 71 BOG C1 O5 sing N N 72 BOG C1 H1 sing N N 73 BOG O1 "C1'" sing N N 74 BOG C2 O2 sing N N 75 BOG C2 C3 sing N N 76 BOG C2 H2 sing N N 77 BOG O2 HO2 sing N N 78 BOG C3 O3 sing N N 79 BOG C3 C4 sing N N 80 BOG C3 H3 sing N N 81 BOG O3 HO3 sing N N 82 BOG C4 O4 sing N N 83 BOG C4 C5 sing N N 84 BOG C4 H4 sing N N 85 BOG O4 HO4 sing N N 86 BOG C5 O5 sing N N 87 BOG C5 C6 sing N N 88 BOG C5 H5 sing N N 89 BOG C6 O6 sing N N 90 BOG C6 H61 sing N N 91 BOG C6 H62 sing N N 92 BOG O6 HO6 sing N N 93 BOG "C1'" "C2'" sing N N 94 BOG "C1'" "H1'1" sing N N 95 BOG "C1'" "H1'2" sing N N 96 BOG "C2'" "C3'" sing N N 97 BOG "C2'" "H2'1" sing N N 98 BOG "C2'" "H2'2" sing N N 99 BOG "C3'" "C4'" sing N N 100 BOG "C3'" "H3'1" sing N N 101 BOG "C3'" "H3'2" sing N N 102 BOG "C4'" "C5'" sing N N 103 BOG "C4'" "H4'1" sing N N 104 BOG "C4'" "H4'2" sing N N 105 BOG "C5'" "C6'" sing N N 106 BOG "C5'" "H5'1" sing N N 107 BOG "C5'" "H5'2" sing N N 108 BOG "C6'" "C7'" sing N N 109 BOG "C6'" "H6'1" sing N N 110 BOG "C6'" "H6'2" sing N N 111 BOG "C7'" "C8'" sing N N 112 BOG "C7'" "H7'1" sing N N 113 BOG "C7'" "H7'2" sing N N 114 BOG "C8'" "H8'1" sing N N 115 BOG "C8'" "H8'2" sing N N 116 BOG "C8'" "H8'3" sing N N 117 CYS N CA sing N N 118 CYS N H sing N N 119 CYS N H2 sing N N 120 CYS CA C sing N N 121 CYS CA CB sing N N 122 CYS CA HA sing N N 123 CYS C O doub N N 124 CYS C OXT sing N N 125 CYS CB SG sing N N 126 CYS CB HB2 sing N N 127 CYS CB HB3 sing N N 128 CYS SG HG sing N N 129 CYS OXT HXT sing N N 130 GLN N CA sing N N 131 GLN N H sing N N 132 GLN N H2 sing N N 133 GLN CA C sing N N 134 GLN CA CB sing N N 135 GLN CA HA sing N N 136 GLN C O doub N N 137 GLN C OXT sing N N 138 GLN CB CG sing N N 139 GLN CB HB2 sing N N 140 GLN CB HB3 sing N N 141 GLN CG CD sing N N 142 GLN CG HG2 sing N N 143 GLN CG HG3 sing N N 144 GLN CD OE1 doub N N 145 GLN CD NE2 sing N N 146 GLN NE2 HE21 sing N N 147 GLN NE2 HE22 sing N N 148 GLN OXT HXT sing N N 149 GLU N CA sing N N 150 GLU N H sing N N 151 GLU N H2 sing N N 152 GLU CA C sing N N 153 GLU CA CB sing N N 154 GLU CA HA sing N N 155 GLU C O doub N N 156 GLU C OXT sing N N 157 GLU CB CG sing N N 158 GLU CB HB2 sing N N 159 GLU CB HB3 sing N N 160 GLU CG CD sing N N 161 GLU CG HG2 sing N N 162 GLU CG HG3 sing N N 163 GLU CD OE1 doub N N 164 GLU CD OE2 sing N N 165 GLU OE2 HE2 sing N N 166 GLU OXT HXT sing N N 167 GLY N CA sing N N 168 GLY N H sing N N 169 GLY N H2 sing N N 170 GLY CA C sing N N 171 GLY CA HA2 sing N N 172 GLY CA HA3 sing N N 173 GLY C O doub N N 174 GLY C OXT sing N N 175 GLY OXT HXT sing N N 176 HIS N CA sing N N 177 HIS N H sing N N 178 HIS N H2 sing N N 179 HIS CA C sing N N 180 HIS CA CB sing N N 181 HIS CA HA sing N N 182 HIS C O doub N N 183 HIS C OXT sing N N 184 HIS CB CG sing N N 185 HIS CB HB2 sing N N 186 HIS CB HB3 sing N N 187 HIS CG ND1 sing Y N 188 HIS CG CD2 doub Y N 189 HIS ND1 CE1 doub Y N 190 HIS ND1 HD1 sing N N 191 HIS CD2 NE2 sing Y N 192 HIS CD2 HD2 sing N N 193 HIS CE1 NE2 sing Y N 194 HIS CE1 HE1 sing N N 195 HIS NE2 HE2 sing N N 196 HIS OXT HXT sing N N 197 HOH O H1 sing N N 198 HOH O H2 sing N N 199 ILE N CA sing N N 200 ILE N H sing N N 201 ILE N H2 sing N N 202 ILE CA C sing N N 203 ILE CA CB sing N N 204 ILE CA HA sing N N 205 ILE C O doub N N 206 ILE C OXT sing N N 207 ILE CB CG1 sing N N 208 ILE CB CG2 sing N N 209 ILE CB HB sing N N 210 ILE CG1 CD1 sing N N 211 ILE CG1 HG12 sing N N 212 ILE CG1 HG13 sing N N 213 ILE CG2 HG21 sing N N 214 ILE CG2 HG22 sing N N 215 ILE CG2 HG23 sing N N 216 ILE CD1 HD11 sing N N 217 ILE CD1 HD12 sing N N 218 ILE CD1 HD13 sing N N 219 ILE OXT HXT sing N N 220 LEU N CA sing N N 221 LEU N H sing N N 222 LEU N H2 sing N N 223 LEU CA C sing N N 224 LEU CA CB sing N N 225 LEU CA HA sing N N 226 LEU C O doub N N 227 LEU C OXT sing N N 228 LEU CB CG sing N N 229 LEU CB HB2 sing N N 230 LEU CB HB3 sing N N 231 LEU CG CD1 sing N N 232 LEU CG CD2 sing N N 233 LEU CG HG sing N N 234 LEU CD1 HD11 sing N N 235 LEU CD1 HD12 sing N N 236 LEU CD1 HD13 sing N N 237 LEU CD2 HD21 sing N N 238 LEU CD2 HD22 sing N N 239 LEU CD2 HD23 sing N N 240 LEU OXT HXT sing N N 241 LYS N CA sing N N 242 LYS N H sing N N 243 LYS N H2 sing N N 244 LYS CA C sing N N 245 LYS CA CB sing N N 246 LYS CA HA sing N N 247 LYS C O doub N N 248 LYS C OXT sing N N 249 LYS CB CG sing N N 250 LYS CB HB2 sing N N 251 LYS CB HB3 sing N N 252 LYS CG CD sing N N 253 LYS CG HG2 sing N N 254 LYS CG HG3 sing N N 255 LYS CD CE sing N N 256 LYS CD HD2 sing N N 257 LYS CD HD3 sing N N 258 LYS CE NZ sing N N 259 LYS CE HE2 sing N N 260 LYS CE HE3 sing N N 261 LYS NZ HZ1 sing N N 262 LYS NZ HZ2 sing N N 263 LYS NZ HZ3 sing N N 264 LYS OXT HXT sing N N 265 MET N CA sing N N 266 MET N H sing N N 267 MET N H2 sing N N 268 MET CA C sing N N 269 MET CA CB sing N N 270 MET CA HA sing N N 271 MET C O doub N N 272 MET C OXT sing N N 273 MET CB CG sing N N 274 MET CB HB2 sing N N 275 MET CB HB3 sing N N 276 MET CG SD sing N N 277 MET CG HG2 sing N N 278 MET CG HG3 sing N N 279 MET SD CE sing N N 280 MET CE HE1 sing N N 281 MET CE HE2 sing N N 282 MET CE HE3 sing N N 283 MET OXT HXT sing N N 284 PHE N CA sing N N 285 PHE N H sing N N 286 PHE N H2 sing N N 287 PHE CA C sing N N 288 PHE CA CB sing N N 289 PHE CA HA sing N N 290 PHE C O doub N N 291 PHE C OXT sing N N 292 PHE CB CG sing N N 293 PHE CB HB2 sing N N 294 PHE CB HB3 sing N N 295 PHE CG CD1 doub Y N 296 PHE CG CD2 sing Y N 297 PHE CD1 CE1 sing Y N 298 PHE CD1 HD1 sing N N 299 PHE CD2 CE2 doub Y N 300 PHE CD2 HD2 sing N N 301 PHE CE1 CZ doub Y N 302 PHE CE1 HE1 sing N N 303 PHE CE2 CZ sing Y N 304 PHE CE2 HE2 sing N N 305 PHE CZ HZ sing N N 306 PHE OXT HXT sing N N 307 PLM C1 O1 sing N N 308 PLM C1 O2 doub N N 309 PLM C1 C2 sing N N 310 PLM O1 H sing N N 311 PLM C2 C3 sing N N 312 PLM C2 H21 sing N N 313 PLM C2 H22 sing N N 314 PLM C3 C4 sing N N 315 PLM C3 H31 sing N N 316 PLM C3 H32 sing N N 317 PLM C4 C5 sing N N 318 PLM C4 H41 sing N N 319 PLM C4 H42 sing N N 320 PLM C5 C6 sing N N 321 PLM C5 H51 sing N N 322 PLM C5 H52 sing N N 323 PLM C6 C7 sing N N 324 PLM C6 H61 sing N N 325 PLM C6 H62 sing N N 326 PLM C7 C8 sing N N 327 PLM C7 H71 sing N N 328 PLM C7 H72 sing N N 329 PLM C8 C9 sing N N 330 PLM C8 H81 sing N N 331 PLM C8 H82 sing N N 332 PLM C9 CA sing N N 333 PLM C9 H91 sing N N 334 PLM C9 H92 sing N N 335 PLM CA CB sing N N 336 PLM CA HA1 sing N N 337 PLM CA HA2 sing N N 338 PLM CB CC sing N N 339 PLM CB HB1 sing N N 340 PLM CB HB2 sing N N 341 PLM CC CD sing N N 342 PLM CC HC1 sing N N 343 PLM CC HC2 sing N N 344 PLM CD CE sing N N 345 PLM CD HD1 sing N N 346 PLM CD HD2 sing N N 347 PLM CE CF sing N N 348 PLM CE HE1 sing N N 349 PLM CE HE2 sing N N 350 PLM CF CG sing N N 351 PLM CF HF1 sing N N 352 PLM CF HF2 sing N N 353 PLM CG HG1 sing N N 354 PLM CG HG2 sing N N 355 PLM CG HG3 sing N N 356 PRO N CA sing N N 357 PRO N CD sing N N 358 PRO N H sing N N 359 PRO CA C sing N N 360 PRO CA CB sing N N 361 PRO CA HA sing N N 362 PRO C O doub N N 363 PRO C OXT sing N N 364 PRO CB CG sing N N 365 PRO CB HB2 sing N N 366 PRO CB HB3 sing N N 367 PRO CG CD sing N N 368 PRO CG HG2 sing N N 369 PRO CG HG3 sing N N 370 PRO CD HD2 sing N N 371 PRO CD HD3 sing N N 372 PRO OXT HXT sing N N 373 RET C1 C2 sing N N 374 RET C1 C6 sing N N 375 RET C1 C16 sing N N 376 RET C1 C17 sing N N 377 RET C2 C3 sing N N 378 RET C2 H21 sing N N 379 RET C2 H22 sing N N 380 RET C3 C4 sing N N 381 RET C3 H31 sing N N 382 RET C3 H32 sing N N 383 RET C4 C5 sing N N 384 RET C4 H41 sing N N 385 RET C4 H42 sing N N 386 RET C5 C6 doub N N 387 RET C5 C18 sing N N 388 RET C6 C7 sing N N 389 RET C7 C8 doub N E 390 RET C7 H7 sing N N 391 RET C8 C9 sing N N 392 RET C8 H8 sing N N 393 RET C9 C10 doub N E 394 RET C9 C19 sing N N 395 RET C10 C11 sing N N 396 RET C10 H10 sing N N 397 RET C11 C12 doub N E 398 RET C11 H11 sing N N 399 RET C12 C13 sing N N 400 RET C12 H12 sing N N 401 RET C13 C14 doub N E 402 RET C13 C20 sing N N 403 RET C14 C15 sing N N 404 RET C14 H14 sing N N 405 RET C15 O1 doub N N 406 RET C15 H15 sing N N 407 RET C16 H161 sing N N 408 RET C16 H162 sing N N 409 RET C16 H163 sing N N 410 RET C17 H171 sing N N 411 RET C17 H172 sing N N 412 RET C17 H173 sing N N 413 RET C18 H181 sing N N 414 RET C18 H182 sing N N 415 RET C18 H183 sing N N 416 RET C19 H191 sing N N 417 RET C19 H192 sing N N 418 RET C19 H193 sing N N 419 RET C20 H201 sing N N 420 RET C20 H202 sing N N 421 RET C20 H203 sing N N 422 SER N CA sing N N 423 SER N H sing N N 424 SER N H2 sing N N 425 SER CA C sing N N 426 SER CA CB sing N N 427 SER CA HA sing N N 428 SER C O doub N N 429 SER C OXT sing N N 430 SER CB OG sing N N 431 SER CB HB2 sing N N 432 SER CB HB3 sing N N 433 SER OG HG sing N N 434 SER OXT HXT sing N N 435 THR N CA sing N N 436 THR N H sing N N 437 THR N H2 sing N N 438 THR CA C sing N N 439 THR CA CB sing N N 440 THR CA HA sing N N 441 THR C O doub N N 442 THR C OXT sing N N 443 THR CB OG1 sing N N 444 THR CB CG2 sing N N 445 THR CB HB sing N N 446 THR OG1 HG1 sing N N 447 THR CG2 HG21 sing N N 448 THR CG2 HG22 sing N N 449 THR CG2 HG23 sing N N 450 THR OXT HXT sing N N 451 TRP N CA sing N N 452 TRP N H sing N N 453 TRP N H2 sing N N 454 TRP CA C sing N N 455 TRP CA CB sing N N 456 TRP CA HA sing N N 457 TRP C O doub N N 458 TRP C OXT sing N N 459 TRP CB CG sing N N 460 TRP CB HB2 sing N N 461 TRP CB HB3 sing N N 462 TRP CG CD1 doub Y N 463 TRP CG CD2 sing Y N 464 TRP CD1 NE1 sing Y N 465 TRP CD1 HD1 sing N N 466 TRP CD2 CE2 doub Y N 467 TRP CD2 CE3 sing Y N 468 TRP NE1 CE2 sing Y N 469 TRP NE1 HE1 sing N N 470 TRP CE2 CZ2 sing Y N 471 TRP CE3 CZ3 doub Y N 472 TRP CE3 HE3 sing N N 473 TRP CZ2 CH2 doub Y N 474 TRP CZ2 HZ2 sing N N 475 TRP CZ3 CH2 sing Y N 476 TRP CZ3 HZ3 sing N N 477 TRP CH2 HH2 sing N N 478 TRP OXT HXT sing N N 479 TYR N CA sing N N 480 TYR N H sing N N 481 TYR N H2 sing N N 482 TYR CA C sing N N 483 TYR CA CB sing N N 484 TYR CA HA sing N N 485 TYR C O doub N N 486 TYR C OXT sing N N 487 TYR CB CG sing N N 488 TYR CB HB2 sing N N 489 TYR CB HB3 sing N N 490 TYR CG CD1 doub Y N 491 TYR CG CD2 sing Y N 492 TYR CD1 CE1 sing Y N 493 TYR CD1 HD1 sing N N 494 TYR CD2 CE2 doub Y N 495 TYR CD2 HD2 sing N N 496 TYR CE1 CZ doub Y N 497 TYR CE1 HE1 sing N N 498 TYR CE2 CZ sing Y N 499 TYR CE2 HE2 sing N N 500 TYR CZ OH sing N N 501 TYR OH HH sing N N 502 TYR OXT HXT sing N N 503 VAL N CA sing N N 504 VAL N H sing N N 505 VAL N H2 sing N N 506 VAL CA C sing N N 507 VAL CA CB sing N N 508 VAL CA HA sing N N 509 VAL C O doub N N 510 VAL C OXT sing N N 511 VAL CB CG1 sing N N 512 VAL CB CG2 sing N N 513 VAL CB HB sing N N 514 VAL CG1 HG11 sing N N 515 VAL CG1 HG12 sing N N 516 VAL CG1 HG13 sing N N 517 VAL CG2 HG21 sing N N 518 VAL CG2 HG22 sing N N 519 VAL CG2 HG23 sing N N 520 VAL OXT HXT sing N N 521 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1E12 _pdbx_initial_refinement_model.details 'PDB ENTRY 1E12' # _atom_sites.entry_id 2JAF _atom_sites.fract_transf_matrix[1][1] 0.010585 _atom_sites.fract_transf_matrix[1][2] 0.006111 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.012223 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.006364 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O S # loop_