HEADER TRANSFERASE 21-DEC-06 2JCA TITLE CRYSTAL STRUCTURE OF THE STREPTOMYCES COELICOLOR HOLO- [ACYL-CARRIER- TITLE 2 PROTEIN] SYNTHASE (ACPS) AT 2 A. COMPND MOL_ID: 1; COMPND 2 MOLECULE: HOLO-[ACYL-CARRIER-PROTEIN] SYNTHASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: HOLO-ACP SYNTHASE, 4'-PHOSPHOPANTETHEINYL TRANSFERASE ACPS, COMPND 5 ACYL CARRIER PROTEIN SYNTHASE; COMPND 6 EC: 2.7.8.7; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STREPTOMYCES COELICOLOR; SOURCE 3 ORGANISM_TAXID: 1902; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS ACP, MAGNESIUM, POLIKETIDE, TRANSFERASE, METAL-BINDING, LIPID KEYWDS 2 SYNTHESIS, PHOSPHOPANTETHEINE ARM, FATTY ACID BIOSYNTHESIS, ACYL KEYWDS 3 CARRIER PROTEIN SYNTHASE EXPDTA X-RAY DIFFRACTION AUTHOR P.DALL'AGLIO,C.ARTHUR,M.P.CRUMP,J.CROSBY,A.T.HADFIELD REVDAT 4 13-DEC-23 2JCA 1 REMARK REVDAT 3 16-NOV-11 2JCA 1 JRNL REMARK HETSYN FORMUL REVDAT 3 2 1 VERSN REVDAT 2 24-FEB-09 2JCA 1 VERSN REVDAT 1 30-JAN-07 2JCA 0 JRNL AUTH P.DALL'AGLIO,C.ARTHUR,C.WILLIAMS,K.VASILAKIS,H.J.MAPLE, JRNL AUTH 2 J.CROSBY,M.P.CRUMP,A.T.HADFIELD JRNL TITL ANALYSIS OF STREPTOMYCES COELICOLOR PHOSPHOPANTETHEINYL JRNL TITL 2 TRANSFERASE, ACPS, REVEALS THE BASIS FOR RELAXED SUBSTRATE JRNL TITL 3 SPECIFICITY. JRNL REF BIOCHEMISTRY V. 50 5704 2011 JRNL REFN ISSN 0006-2960 JRNL PMID 21595442 JRNL DOI 10.1021/BI2003668 REMARK 2 REMARK 2 RESOLUTION. 1.98 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.98 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 65.80 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 24295 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.178 REMARK 3 FREE R VALUE : 0.220 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1305 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.98 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.03 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1683 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2320 REMARK 3 BIN FREE R VALUE SET COUNT : 103 REMARK 3 BIN FREE R VALUE : 0.2730 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2661 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 22 REMARK 3 SOLVENT ATOMS : 199 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 29.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 39.50 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.26000 REMARK 3 B22 (A**2) : 0.26000 REMARK 3 B33 (A**2) : -0.39000 REMARK 3 B12 (A**2) : 0.13000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.173 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.154 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.108 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 3.791 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2770 ; 0.018 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3778 ; 1.690 ; 1.978 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 381 ; 9.519 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 98 ;29.129 ;21.429 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 424 ;14.149 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 30 ;17.032 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 446 ; 0.114 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2075 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1298 ; 0.217 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1939 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 188 ; 0.159 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 75 ; 0.230 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 17 ; 0.210 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1839 ; 1.550 ; 2.000 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2891 ; 2.726 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 972 ; 5.290 ; 6.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 880 ; 8.205 ;10.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. THE ELECTRON DENSITY IN THE B CHAIN BETWEEN RESIDUES REMARK 3 65-68 IS NOT WELL DEFINED. THE ELECTRON DENSITY IN THE B CHAIN REMARK 3 BETWEEN RESIDUES 22-25 IS NOT WELL DEFINED. REMARK 4 REMARK 4 2JCA COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1290030862. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 23-NOV-05 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.80 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SRS REMARK 200 BEAMLINE : PX14.1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.48 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25759 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.980 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 6.400 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 22.1900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.98 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.05 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.7 REMARK 200 DATA REDUNDANCY IN SHELL : 3.00 REMARK 200 R MERGE FOR SHELL (I) : 0.38000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.040 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 1F7T REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 39.78 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: ACPS WAS DIALYZED IN 50 MM TRIS PH REMARK 280 8.8, 10% GLYCEROL. THEN IT WAS CRYSTALLIZED IN 0.2M AMMONIUM REMARK 280 SULPHATE, 0.1M NACACODYLATE PH 6.5, 30% PEG8000, PH 8.80 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+2/3 REMARK 290 6555 -X,-X+Y,-Z+1/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 36.11700 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 72.23400 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 72.23400 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 36.11700 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 15490 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -69.8 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -19 REMARK 465 GLY A -18 REMARK 465 SER A -17 REMARK 465 SER A -16 REMARK 465 HIS A -15 REMARK 465 HIS A -14 REMARK 465 HIS A -13 REMARK 465 HIS A -12 REMARK 465 HIS A -11 REMARK 465 HIS A -10 REMARK 465 SER A -9 REMARK 465 SER A -8 REMARK 465 GLY A -7 REMARK 465 LEU A -6 REMARK 465 VAL A -5 REMARK 465 PRO A -4 REMARK 465 ARG A -3 REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET B -19 REMARK 465 GLY B -18 REMARK 465 SER B -17 REMARK 465 SER B -16 REMARK 465 HIS B -15 REMARK 465 HIS B -14 REMARK 465 HIS B -13 REMARK 465 HIS B -12 REMARK 465 HIS B -11 REMARK 465 HIS B -10 REMARK 465 SER B -9 REMARK 465 SER B -8 REMARK 465 GLY B -7 REMARK 465 LEU B -6 REMARK 465 VAL B -5 REMARK 465 PRO B -4 REMARK 465 ARG B -3 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET C -19 REMARK 465 GLY C -18 REMARK 465 SER C -17 REMARK 465 SER C -16 REMARK 465 HIS C -15 REMARK 465 HIS C -14 REMARK 465 HIS C -13 REMARK 465 HIS C -12 REMARK 465 HIS C -11 REMARK 465 HIS C -10 REMARK 465 SER C -9 REMARK 465 SER C -8 REMARK 465 GLY C -7 REMARK 465 LEU C -6 REMARK 465 VAL C -5 REMARK 465 PRO C -4 REMARK 465 ARG C -3 REMARK 465 GLY C -2 REMARK 465 SER C -1 REMARK 465 HIS C 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 43 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 LEU B 108 CA - CB - CG ANGL. DEV. = 14.6 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP B 111 -163.60 -112.99 REMARK 500 THR C 23 122.67 175.98 REMARK 500 ALA C 25 -87.53 46.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 HIS A 110 ASP A 111 121.91 REMARK 500 PRO C 24 ALA C 25 48.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2016 DISTANCE = 5.87 ANGSTROMS REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 1124 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 1125 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 1124 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 C 1124 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 1126 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JBZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE STREPTOMYCES COELICOLOR HOLO- ACYL CARRIER REMARK 900 PROTEIN SYNTHASE (ACPS) AT 1.6 A REMARK 900 RELATED ID: 2WDS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE STREPTOMYCES COELICOLOR H110A ACPS MUTANT REMARK 900 IN COMPLEX WITH COFACTOR COA AT 1.3 A REMARK 900 RELATED ID: 2WDY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE STREPTOMYCES COELICOLOR D111A ACPS MUTANT REMARK 900 IN COMPLEX WITH COFACTOR COA AT 1.4 A REMARK 900 RELATED ID: 2WDO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE S. COELICOLOR ACPS IN COMPLEX WITH ACETYL- REMARK 900 COA AT 1.5 A DBREF 2JCA A -19 0 PDB 2JCA 2JCA -19 0 DBREF 2JCA A 1 123 UNP O86785 ACPS_STRCO 1 123 DBREF 2JCA B -19 0 PDB 2JCA 2JCA -19 0 DBREF 2JCA B 1 123 UNP O86785 ACPS_STRCO 1 123 DBREF 2JCA C -19 0 PDB 2JCA 2JCA -19 0 DBREF 2JCA C 1 123 UNP O86785 ACPS_STRCO 1 123 SEQRES 1 A 143 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 143 LEU VAL PRO ARG GLY SER HIS MET SER ILE ILE GLY VAL SEQRES 3 A 143 GLY ILE ASP VAL ALA GLU VAL GLU ARG PHE GLY ALA ALA SEQRES 4 A 143 LEU GLU ARG THR PRO ALA LEU ALA GLY ARG LEU PHE LEU SEQRES 5 A 143 GLU SER GLU LEU LEU LEU PRO GLY GLY GLU ARG ARG GLY SEQRES 6 A 143 VAL ALA SER LEU ALA ALA ARG PHE ALA ALA LYS GLU ALA SEQRES 7 A 143 LEU ALA LYS ALA LEU GLY ALA PRO ALA GLY LEU LEU TRP SEQRES 8 A 143 THR ASP ALA GLU VAL TRP VAL GLU ALA GLY GLY ARG PRO SEQRES 9 A 143 ARG LEU ARG VAL THR GLY THR VAL ALA ALA ARG ALA ALA SEQRES 10 A 143 GLU LEU GLY VAL ALA SER TRP HIS VAL SER LEU SER HIS SEQRES 11 A 143 ASP ALA GLY ILE ALA SER ALA VAL VAL ILE ALA GLU GLY SEQRES 1 B 143 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 143 LEU VAL PRO ARG GLY SER HIS MET SER ILE ILE GLY VAL SEQRES 3 B 143 GLY ILE ASP VAL ALA GLU VAL GLU ARG PHE GLY ALA ALA SEQRES 4 B 143 LEU GLU ARG THR PRO ALA LEU ALA GLY ARG LEU PHE LEU SEQRES 5 B 143 GLU SER GLU LEU LEU LEU PRO GLY GLY GLU ARG ARG GLY SEQRES 6 B 143 VAL ALA SER LEU ALA ALA ARG PHE ALA ALA LYS GLU ALA SEQRES 7 B 143 LEU ALA LYS ALA LEU GLY ALA PRO ALA GLY LEU LEU TRP SEQRES 8 B 143 THR ASP ALA GLU VAL TRP VAL GLU ALA GLY GLY ARG PRO SEQRES 9 B 143 ARG LEU ARG VAL THR GLY THR VAL ALA ALA ARG ALA ALA SEQRES 10 B 143 GLU LEU GLY VAL ALA SER TRP HIS VAL SER LEU SER HIS SEQRES 11 B 143 ASP ALA GLY ILE ALA SER ALA VAL VAL ILE ALA GLU GLY SEQRES 1 C 143 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 C 143 LEU VAL PRO ARG GLY SER HIS MET SER ILE ILE GLY VAL SEQRES 3 C 143 GLY ILE ASP VAL ALA GLU VAL GLU ARG PHE GLY ALA ALA SEQRES 4 C 143 LEU GLU ARG THR PRO ALA LEU ALA GLY ARG LEU PHE LEU SEQRES 5 C 143 GLU SER GLU LEU LEU LEU PRO GLY GLY GLU ARG ARG GLY SEQRES 6 C 143 VAL ALA SER LEU ALA ALA ARG PHE ALA ALA LYS GLU ALA SEQRES 7 C 143 LEU ALA LYS ALA LEU GLY ALA PRO ALA GLY LEU LEU TRP SEQRES 8 C 143 THR ASP ALA GLU VAL TRP VAL GLU ALA GLY GLY ARG PRO SEQRES 9 C 143 ARG LEU ARG VAL THR GLY THR VAL ALA ALA ARG ALA ALA SEQRES 10 C 143 GLU LEU GLY VAL ALA SER TRP HIS VAL SER LEU SER HIS SEQRES 11 C 143 ASP ALA GLY ILE ALA SER ALA VAL VAL ILE ALA GLU GLY HET SO4 A1124 5 HET NA A1125 1 HET GOL A1126 6 HET SO4 B1124 5 HET SO4 C1124 5 HETNAM SO4 SULFATE ION HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 4 SO4 3(O4 S 2-) FORMUL 5 NA NA 1+ FORMUL 6 GOL C3 H8 O3 FORMUL 9 HOH *199(H2 O) HELIX 1 1 VAL A 13 THR A 23 1 11 HELIX 2 2 LEU A 26 PHE A 31 1 6 HELIX 3 3 LEU A 32 LEU A 37 1 6 HELIX 4 4 GLY A 45 LEU A 63 1 19 HELIX 5 5 LEU A 70 THR A 72 5 3 HELIX 6 6 THR A 89 GLY A 100 1 12 HELIX 7 7 VAL B 13 THR B 23 1 11 HELIX 8 8 ALA B 25 PHE B 31 1 7 HELIX 9 9 LEU B 32 LEU B 37 1 6 HELIX 10 10 GLY B 45 LEU B 63 1 19 HELIX 11 11 LEU B 70 THR B 72 5 3 HELIX 12 12 THR B 89 LEU B 99 1 11 HELIX 13 13 VAL C 13 ARG C 22 1 10 HELIX 14 14 PRO C 24 PHE C 31 1 8 HELIX 15 15 LEU C 32 LEU C 36 5 5 HELIX 16 16 GLY C 45 LEU C 63 1 19 HELIX 17 17 LEU C 70 THR C 72 5 3 HELIX 18 18 THR C 89 GLY C 100 1 12 SHEET 1 AA 3 SER A 2 GLU A 12 0 SHEET 2 AA 3 ILE A 114 GLY A 123 -1 O ALA A 115 N ALA A 11 SHEET 3 AA 3 SER A 103 HIS A 110 -1 O SER A 103 N GLU A 122 SHEET 1 AB 2 ALA A 74 VAL A 78 0 SHEET 2 AB 2 PRO A 84 VAL A 88 -1 O ARG A 85 N TRP A 77 SHEET 1 BA 3 SER B 2 GLU B 12 0 SHEET 2 BA 3 ILE B 114 GLY B 123 -1 O ALA B 115 N ALA B 11 SHEET 3 BA 3 SER B 103 HIS B 110 -1 O SER B 103 N GLU B 122 SHEET 1 BB 2 ALA B 74 VAL B 78 0 SHEET 2 BB 2 PRO B 84 VAL B 88 -1 O ARG B 85 N TRP B 77 SHEET 1 CA 3 SER C 2 GLU C 12 0 SHEET 2 CA 3 ILE C 114 GLY C 123 -1 O ALA C 115 N ALA C 11 SHEET 3 CA 3 SER C 103 HIS C 110 -1 O SER C 103 N GLU C 122 SHEET 1 CB 2 ALA C 74 VAL C 78 0 SHEET 2 CB 2 PRO C 84 VAL C 88 -1 O ARG C 85 N TRP C 77 SITE 1 AC1 6 ARG A 44 SER A 48 ARG A 52 HIS A 110 SITE 2 AC1 6 HOH A2063 HOH A2064 SITE 1 AC2 5 GLU A 33 SER A 34 GLY C 45 SER C 48 SITE 2 AC2 5 HOH C2025 SITE 1 AC3 4 SER B 48 ARG B 52 HIS B 110 HOH B2077 SITE 1 AC4 6 ARG C 44 ARG C 52 HIS C 110 HOH C2024 SITE 2 AC4 6 HOH C2055 HOH C2056 SITE 1 AC5 12 LYS A 61 GLY A 64 ALA A 65 PRO A 66 SITE 2 AC5 12 HOH A2026 HOH A2065 HOH A2066 GLY B 81 SITE 3 AC5 12 GLY B 82 ARG B 83 PRO B 84 HOH B2069 CRYST1 75.940 75.940 108.351 90.00 90.00 120.00 P 31 2 1 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013168 0.007603 0.000000 0.00000 SCALE2 0.000000 0.015205 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009229 0.00000 MTRIX1 1 0.222200 -0.274000 0.935700 26.09000 1 MTRIX2 1 0.842100 -0.429700 -0.325800 -23.54000 1 MTRIX3 1 0.491400 0.860400 0.135200 -18.19000 1 MTRIX1 2 0.245400 0.868300 0.431200 22.75000 1 MTRIX2 2 -0.275200 -0.364100 0.889800 12.16000 1 MTRIX3 2 0.929500 -0.337000 0.149600 -29.60000 1