HEADER LIGASE 21-DEC-06 2JCB TITLE THE CRYSTAL STRUCTURE OF 5-FORMYL-TETRAHYDROFOLATE CYCLOLIGASE FROM TITLE 2 BACILLUS ANTHRACIS (BA4489) COMPND MOL_ID: 1; COMPND 2 MOLECULE: 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE FAMILY PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: 5-FORMYL-TETRAHYDROFOLATE CYCLOLIGASE; COMPND 5 EC: 6.3.3.2; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS ANTHRACIS; SOURCE 3 ORGANISM_TAXID: 198094; SOURCE 4 STRAIN: AMES; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_VARIANT: ROSETTA PLYSS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PDEST14; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: GATEWAY KEYWDS LIGASE, FOLATE METABOLISM EXPDTA X-RAY DIFFRACTION AUTHOR C.MEIER,L.G.CARTER,G.WINTER,R.J.OWENS,D.I.STUART,R.M.ESNOUF,OXFORD AUTHOR 2 PROTEIN PRODUCTION FACILITY (OPPF),STRUCTURAL PROTEOMICS IN EUROPE AUTHOR 3 (SPINE) REVDAT 6 13-DEC-23 2JCB 1 REMARK LINK REVDAT 5 06-MAY-15 2JCB 1 SOURCE REVDAT 4 13-JUL-11 2JCB 1 VERSN REVDAT 3 24-FEB-09 2JCB 1 VERSN REVDAT 2 13-MAR-07 2JCB 1 JRNL REVDAT 1 20-FEB-07 2JCB 0 JRNL AUTH C.MEIER,L.G.CARTER,G.WINTER,R.J.OWENS,D.I.STUART,R.M.ESNOUF JRNL TITL STRUCTURE OF 5-FORMYLTETRAHYDROFOLATE CYCLO-LIGASE FROM JRNL TITL 2 BACILLUS ANTHRACIS (BA4489). JRNL REF ACTA CRYSTALLOGR.,SECT.F V. 63 168 2007 JRNL REFN ESSN 1744-3091 JRNL PMID 17329806 JRNL DOI 10.1107/S1744309107007221 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 18.69 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 47297 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.189 REMARK 3 FREE R VALUE : 0.238 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2491 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.64 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3468 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2800 REMARK 3 BIN FREE R VALUE SET COUNT : 173 REMARK 3 BIN FREE R VALUE : 0.3460 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3168 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 66 REMARK 3 SOLVENT ATOMS : 324 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.68 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : 0.00000 REMARK 3 B33 (A**2) : -0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.101 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.106 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.092 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 5.254 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.948 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3299 ; 0.016 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4462 ; 1.628 ; 1.982 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 382 ; 5.890 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 160 ;34.810 ;24.188 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 618 ;15.423 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 22 ;18.805 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 484 ; 0.108 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2436 ; 0.007 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1491 ; 0.211 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 2234 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 254 ; 0.156 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 51 ; 0.178 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 15 ; 0.155 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1983 ; 1.092 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3120 ; 1.569 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1523 ; 2.467 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1342 ; 3.560 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 1 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 4 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 4 A 79 5 REMARK 3 1 B 4 B 79 5 REMARK 3 2 A 83 A 110 5 REMARK 3 2 B 83 B 110 5 REMARK 3 3 A 113 A 169 5 REMARK 3 3 B 113 B 169 5 REMARK 3 4 A 173 A 187 5 REMARK 3 4 B 173 B 187 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 704 ; 0.17 ; 0.50 REMARK 3 LOOSE POSITIONAL 1 A (A): 737 ; 0.54 ; 5.00 REMARK 3 MEDIUM THERMAL 1 A (A**2): 704 ; 2.57 ; 10.00 REMARK 3 LOOSE THERMAL 1 A (A**2): 737 ; 2.80 ; 20.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -3 A 189 REMARK 3 ORIGIN FOR THE GROUP (A): 37.1423 1.8559 1.1883 REMARK 3 T TENSOR REMARK 3 T11: -0.1816 T22: -0.2215 REMARK 3 T33: -0.1566 T12: -0.0047 REMARK 3 T13: -0.0239 T23: -0.0435 REMARK 3 L TENSOR REMARK 3 L11: 2.1426 L22: 2.7626 REMARK 3 L33: 3.1718 L12: -0.0026 REMARK 3 L13: 0.3344 L23: -0.7504 REMARK 3 S TENSOR REMARK 3 S11: -0.0378 S12: -0.1080 S13: 0.1119 REMARK 3 S21: 0.2667 S22: -0.0014 S23: 0.0660 REMARK 3 S31: -0.1970 S32: 0.0209 S33: 0.0393 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -1 B 187 REMARK 3 ORIGIN FOR THE GROUP (A): 21.0115 19.7249 30.6753 REMARK 3 T TENSOR REMARK 3 T11: -0.1451 T22: -0.1023 REMARK 3 T33: -0.1329 T12: 0.0155 REMARK 3 T13: -0.0043 T23: 0.0181 REMARK 3 L TENSOR REMARK 3 L11: 2.8831 L22: 2.2442 REMARK 3 L33: 7.6517 L12: -0.4751 REMARK 3 L13: -2.0434 L23: -0.2900 REMARK 3 S TENSOR REMARK 3 S11: 0.1397 S12: 0.2428 S13: 0.1695 REMARK 3 S21: -0.2397 S22: -0.2152 S23: -0.1260 REMARK 3 S31: -0.3643 S32: -0.1683 S33: 0.0754 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1190 A 1190 REMARK 3 ORIGIN FOR THE GROUP (A): 42.5431 12.6861 10.8301 REMARK 3 T TENSOR REMARK 3 T11: 0.0872 T22: -0.1554 REMARK 3 T33: -0.1681 T12: -0.1253 REMARK 3 T13: -0.0509 T23: -0.1371 REMARK 3 L TENSOR REMARK 3 L11: 31.8600 L22: 8.6778 REMARK 3 L33: 10.1266 L12: 2.7826 REMARK 3 L13: 12.2118 L23: -3.8058 REMARK 3 S TENSOR REMARK 3 S11: 0.4947 S12: -1.2897 S13: -0.2281 REMARK 3 S21: 1.1515 S22: -0.3310 S23: 0.3060 REMARK 3 S31: -0.7649 S32: -0.0755 S33: -0.1637 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1189 B 1189 REMARK 3 ORIGIN FOR THE GROUP (A): 8.3106 23.5475 21.9061 REMARK 3 T TENSOR REMARK 3 T11: 0.0130 T22: 0.2858 REMARK 3 T33: 0.0413 T12: 0.1364 REMARK 3 T13: -0.1208 T23: 0.1129 REMARK 3 L TENSOR REMARK 3 L11: 8.9649 L22: 5.8201 REMARK 3 L33: 17.1126 L12: 4.9809 REMARK 3 L13: -11.9671 L23: -8.5126 REMARK 3 S TENSOR REMARK 3 S11: -0.9301 S12: 0.5528 S13: 0.2202 REMARK 3 S21: -1.6077 S22: 1.0964 S23: 0.9435 REMARK 3 S31: -1.1018 S32: -2.3021 S33: -0.1663 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2JCB COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 21-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1290030894. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-SEP-04 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 49797 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 20.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.5 REMARK 200 DATA REDUNDANCY : 2.500 REMARK 200 R MERGE (I) : 0.04000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 13.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 94.3 REMARK 200 DATA REDUNDANCY IN SHELL : 2.00 REMARK 200 R MERGE FOR SHELL (I) : 0.34000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1YDM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.19 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.8MM FOLINATE, 3.8MM ATP, 30MM REMARK 280 MAGNESIUM CHLORIDE, 25% POLYETHYLENE GLYCOL 3350, 100 MM BIS- REMARK 280 TRIS (PH 5.5), PH 5.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -7 REMARK 465 ALA A -6 REMARK 465 HIS A -5 REMARK 465 GLY A 190 REMARK 465 LEU A 191 REMARK 465 VAL A 192 REMARK 465 MET B -7 REMARK 465 ALA B -6 REMARK 465 HIS B -5 REMARK 465 HIS B -4 REMARK 465 HIS B -3 REMARK 465 HIS B -2 REMARK 465 ASN B 189 REMARK 465 GLY B 190 REMARK 465 LEU B 191 REMARK 465 VAL B 192 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 54 -125.51 37.99 REMARK 500 TYR A 100 125.58 156.78 REMARK 500 MET A 101 -83.38 54.67 REMARK 500 GLU B 54 -120.86 38.81 REMARK 500 MET B 101 -114.68 54.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2006 DISTANCE = 6.67 ANGSTROMS REMARK 525 HOH A2009 DISTANCE = 6.57 ANGSTROMS REMARK 525 HOH A2053 DISTANCE = 6.04 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1192 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 144 OD2 REMARK 620 2 ASP A 173 OD1 90.6 REMARK 620 3 ADP A1190 O3B 87.9 176.9 REMARK 620 4 ADP A1190 O1A 105.4 89.8 88.0 REMARK 620 5 HOH A2157 O 87.3 88.0 94.6 167.1 REMARK 620 6 HOH A2198 O 172.1 91.2 90.7 82.3 85.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1191 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 144 OD2 REMARK 620 2 ASP B 173 OD1 85.9 REMARK 620 3 ADP B1189 O1B 86.8 171.4 REMARK 620 4 ADP B1189 O2A 103.0 88.1 88.9 REMARK 620 5 HOH B2092 O 83.1 91.5 92.3 173.8 REMARK 620 6 HOH B2120 O 167.3 95.5 92.6 89.7 84.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A 1191 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1192 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 B 1190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1191 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 1190 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 1189 REMARK 999 REMARK 999 SEQUENCE REMARK 999 M1V IS A CLONING ARTEFACT. DBREF 2JCB A 2 192 UNP Q81LX0 Q81LX0_BACAN 2 192 DBREF 2JCB B 2 192 UNP Q81LX0 Q81LX0_BACAN 2 192 SEQADV 2JCB MET A -7 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB ALA A -6 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB HIS A -5 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB HIS A -4 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB HIS A -3 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB HIS A -2 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB HIS A -1 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB HIS A 0 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB VAL A 1 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB MET B -7 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB ALA B -6 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB HIS B -5 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB HIS B -4 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB HIS B -3 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB HIS B -2 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB HIS B -1 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB HIS B 0 UNP Q81LX0 EXPRESSION TAG SEQADV 2JCB VAL B 1 UNP Q81LX0 EXPRESSION TAG SEQRES 1 A 200 MET ALA HIS HIS HIS HIS HIS HIS VAL ARG GLU GLU LYS SEQRES 2 A 200 LEU ARG LEU ARG LYS GLN ILE ILE GLU HIS MET ASN SER SEQRES 3 A 200 LEU SER LYS GLU ARG TYR THR THR LEU SER GLU GLN ILE SEQRES 4 A 200 VAL PHE SER LEU TYR GLU GLN LYS GLU TRP ALA GLU ALA SEQRES 5 A 200 LYS THR ILE GLY ILE THR LEU SER MET GLU ASN GLU VAL SEQRES 6 A 200 ASN THR TYR PRO ILE ILE GLU LYS ALA TRP LYS GLU GLY SEQRES 7 A 200 LYS ARG VAL VAL VAL PRO LYS CYS ASN LYS GLU THR ARG SEQRES 8 A 200 THR MET SER PHE ARG GLN ILE SER ASN PHE ASP GLN LEU SEQRES 9 A 200 GLU THR VAL TYR MET ASN LEU ARG GLU PRO ILE PRO ALA SEQRES 10 A 200 LEU THR GLU GLU VAL ASN ALA ASP GLU ILE ASP LEU GLN SEQRES 11 A 200 ILE VAL PRO GLY VAL ALA TYR THR GLU ARG GLY GLU ARG SEQRES 12 A 200 ILE GLY TYR GLY GLY GLY TYR TYR ASP ARG TYR LEU VAL SEQRES 13 A 200 HIS TYR LYS GLY LYS THR LEU SER LEU ALA TYR SER PHE SEQRES 14 A 200 GLN MET VAL GLU HIS ILE PRO VAL GLU PRO PHE ASP LYS SEQRES 15 A 200 ASN VAL GLU LYS ILE ILE THR GLU LYS GLY THR MET VAL SEQRES 16 A 200 LYS ASN GLY LEU VAL SEQRES 1 B 200 MET ALA HIS HIS HIS HIS HIS HIS VAL ARG GLU GLU LYS SEQRES 2 B 200 LEU ARG LEU ARG LYS GLN ILE ILE GLU HIS MET ASN SER SEQRES 3 B 200 LEU SER LYS GLU ARG TYR THR THR LEU SER GLU GLN ILE SEQRES 4 B 200 VAL PHE SER LEU TYR GLU GLN LYS GLU TRP ALA GLU ALA SEQRES 5 B 200 LYS THR ILE GLY ILE THR LEU SER MET GLU ASN GLU VAL SEQRES 6 B 200 ASN THR TYR PRO ILE ILE GLU LYS ALA TRP LYS GLU GLY SEQRES 7 B 200 LYS ARG VAL VAL VAL PRO LYS CYS ASN LYS GLU THR ARG SEQRES 8 B 200 THR MET SER PHE ARG GLN ILE SER ASN PHE ASP GLN LEU SEQRES 9 B 200 GLU THR VAL TYR MET ASN LEU ARG GLU PRO ILE PRO ALA SEQRES 10 B 200 LEU THR GLU GLU VAL ASN ALA ASP GLU ILE ASP LEU GLN SEQRES 11 B 200 ILE VAL PRO GLY VAL ALA TYR THR GLU ARG GLY GLU ARG SEQRES 12 B 200 ILE GLY TYR GLY GLY GLY TYR TYR ASP ARG TYR LEU VAL SEQRES 13 B 200 HIS TYR LYS GLY LYS THR LEU SER LEU ALA TYR SER PHE SEQRES 14 B 200 GLN MET VAL GLU HIS ILE PRO VAL GLU PRO PHE ASP LYS SEQRES 15 B 200 ASN VAL GLU LYS ILE ILE THR GLU LYS GLY THR MET VAL SEQRES 16 B 200 LYS ASN GLY LEU VAL HET ADP A1190 27 HET PO4 A1191 5 HET MG A1192 1 HET ADP B1189 27 HET PO4 B1190 5 HET MG B1191 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM PO4 PHOSPHATE ION HETNAM MG MAGNESIUM ION FORMUL 3 ADP 2(C10 H15 N5 O10 P2) FORMUL 4 PO4 2(O4 P 3-) FORMUL 5 MG 2(MG 2+) FORMUL 9 HOH *324(H2 O) HELIX 1 1 HIS A 0 LEU A 19 1 20 HELIX 2 2 SER A 20 GLU A 37 1 18 HELIX 3 3 GLN A 38 ALA A 44 1 7 HELIX 4 4 THR A 59 GLU A 69 1 11 HELIX 5 5 ASN A 92 ASP A 94 5 3 HELIX 6 6 PRO A 108 THR A 111 5 4 HELIX 7 7 ASN A 115 ILE A 119 5 5 HELIX 8 8 GLY A 141 LEU A 147 1 7 HELIX 9 9 TYR A 159 GLN A 162 5 4 HELIX 10 10 HIS B -1 LEU B 19 1 21 HELIX 11 11 SER B 20 GLU B 37 1 18 HELIX 12 12 GLN B 38 ALA B 44 1 7 HELIX 13 13 THR B 59 GLU B 69 1 11 HELIX 14 14 ASN B 92 ASP B 94 5 3 HELIX 15 15 PRO B 108 THR B 111 5 4 HELIX 16 16 ASN B 115 ILE B 119 5 5 HELIX 17 17 GLY B 141 LEU B 147 1 7 HELIX 18 18 TYR B 159 GLN B 162 5 4 SHEET 1 AA 8 GLU A 112 GLU A 113 0 SHEET 2 AA 8 THR A 84 ILE A 90 -1 O GLN A 89 N GLU A 112 SHEET 3 AA 8 ARG A 72 ASN A 79 -1 O VAL A 73 N ILE A 90 SHEET 4 AA 8 THR A 46 GLY A 48 1 O ILE A 47 N VAL A 74 SHEET 5 AA 8 LEU A 121 ILE A 123 1 O LEU A 121 N GLY A 48 SHEET 6 AA 8 LYS A 153 LEU A 157 1 O LYS A 153 N GLN A 122 SHEET 7 AA 8 LYS A 178 THR A 181 1 O LYS A 178 N SER A 156 SHEET 8 AA 8 GLY A 184 VAL A 187 -1 O GLY A 184 N THR A 181 SHEET 1 AB 2 LEU A 96 TYR A 100 0 SHEET 2 AB 2 LEU A 103 PRO A 106 -1 O LEU A 103 N VAL A 99 SHEET 1 AC 2 ALA A 128 TYR A 129 0 SHEET 2 AC 2 ARG A 135 ILE A 136 -1 N ILE A 136 O ALA A 128 SHEET 1 BA 7 SER B 86 ILE B 90 0 SHEET 2 BA 7 ARG B 72 LYS B 77 -1 O VAL B 73 N ILE B 90 SHEET 3 BA 7 THR B 46 GLY B 48 1 O ILE B 47 N VAL B 74 SHEET 4 BA 7 LEU B 121 ILE B 123 1 O LEU B 121 N GLY B 48 SHEET 5 BA 7 LYS B 153 LEU B 157 1 O LYS B 153 N GLN B 122 SHEET 6 BA 7 LYS B 178 ILE B 180 1 O LYS B 178 N SER B 156 SHEET 7 BA 7 THR B 185 VAL B 187 -1 O MET B 186 N ILE B 179 SHEET 1 BB 2 LEU B 96 TYR B 100 0 SHEET 2 BB 2 LEU B 103 PRO B 106 -1 O LEU B 103 N VAL B 99 SHEET 1 BC 2 ALA B 128 TYR B 129 0 SHEET 2 BC 2 ARG B 135 ILE B 136 -1 N ILE B 136 O ALA B 128 LINK OD2 ASP A 144 MG MG A1192 1555 1555 1.92 LINK OD1 ASP A 173 MG MG A1192 1555 1555 2.13 LINK O3B ADP A1190 MG MG A1192 1555 1555 2.13 LINK O1A ADP A1190 MG MG A1192 1555 1555 2.09 LINK MG MG A1192 O HOH A2157 1555 1555 2.12 LINK MG MG A1192 O HOH A2198 1555 1555 2.28 LINK OD2 ASP B 144 MG MG B1191 1555 1555 2.12 LINK OD1 ASP B 173 MG MG B1191 1555 1555 2.20 LINK O1B ADP B1189 MG MG B1191 1555 1555 2.17 LINK O2A ADP B1189 MG MG B1191 1555 1555 2.06 LINK MG MG B1191 O HOH B2092 1555 1555 2.30 LINK MG MG B1191 O HOH B2120 1555 1555 1.90 SITE 1 AC1 11 ARG A 135 GLY A 137 TYR A 138 GLY A 140 SITE 2 AC1 11 GLY A 141 TYR A 142 TYR A 143 ADP A1190 SITE 3 AC1 11 HOH A2200 HOH A2201 HOH A2202 SITE 1 AC2 6 LYS A 5 ASP A 144 ASP A 173 ADP A1190 SITE 2 AC2 6 HOH A2157 HOH A2198 SITE 1 AC3 9 ARG B 135 GLY B 137 TYR B 138 GLY B 141 SITE 2 AC3 9 TYR B 142 TYR B 143 ADP B1189 HOH B2121 SITE 3 AC3 9 HOH B2122 SITE 1 AC4 5 ASP B 144 ASP B 173 ADP B1189 HOH B2092 SITE 2 AC4 5 HOH B2120 SITE 1 AC5 20 ARG A 2 LYS A 5 ARG A 9 GLY A 137 SITE 2 AC5 20 TYR A 138 GLY A 139 GLY A 140 GLY A 141 SITE 3 AC5 20 ASP A 144 ARG A 145 PHE A 172 ASP A 173 SITE 4 AC5 20 PO4 A1191 MG A1192 HOH A2024 HOH A2178 SITE 5 AC5 20 HOH A2197 HOH A2198 HOH A2199 HOH A2200 SITE 1 AC6 18 ARG B 2 LYS B 5 ARG B 9 ILE B 136 SITE 2 AC6 18 GLY B 137 TYR B 138 GLY B 139 GLY B 140 SITE 3 AC6 18 GLY B 141 ASP B 144 ARG B 145 PHE B 172 SITE 4 AC6 18 ASP B 173 PO4 B1190 MG B1191 HOH B2093 SITE 5 AC6 18 HOH B2120 HOH B2121 CRYST1 37.152 45.499 66.999 74.92 78.01 70.14 P 1 2 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.026916 -0.009722 -0.003794 0.00000 SCALE2 0.000000 0.023368 -0.004921 0.00000 SCALE3 0.000000 0.000000 0.015593 0.00000 MTRIX1 1 -0.671690 -0.740170 -0.031410 46.94400 1 MTRIX2 1 -0.739970 0.668250 0.076730 46.06200 1 MTRIX3 1 -0.035800 0.074780 -0.996560 33.11700 1