HEADER TRANSFERASE 17-JAN-07 2JEI TITLE THE MOLECULAR BASIS OF SELECTIVITY OF NUCLEOSIDE TRIPHOSPHATE TITLE 2 INCORPORATION OPPOSITE O6-BENZYLGUANINE BY SULFOLOBUS SOLFATARICUS TITLE 3 DNA POLYMERASE IV: STEADY-STATE AND PRE-STEADY-STATE KINETICS AND X- TITLE 4 RAY CRYSTALLOGRAPHY OF CORRECT AND INCORRECT PAIRING CAVEAT 2JEI NUCLEIC ACID RESIDUES HAVE CHIRALITY ERRORS RESIDUE G P 1 AT CAVEAT 2 2JEI ATOM C3* RESIDUE G P 2 AT ATOM C3* COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA POLYMERASE IV; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: POL IV; COMPND 5 EC: 2.7.7.7; COMPND 6 ENGINEERED: YES; COMPND 7 OTHER_DETAILS: HIS-TAG ADDED TO N-TERMINUS; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-D(*GP*GP*GP*GP*GP*AP*AP*GP*GP*AP *TP*TP*CP*T)-3'; COMPND 10 CHAIN: P; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: 5'-D(*TP*CP*AP*C BZGP*GP*AP*AP*TP*CP*CP COMPND 14 *TP*TP*CP*CP*CP*CP*C)-3'; COMPND 15 CHAIN: T; COMPND 16 ENGINEERED: YES; COMPND 17 OTHER_DETAILS: BZG INDICATES O6-BENZYLGUANINE MODIFICATION SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SULFOLOBUS SOLFATARICUS; SOURCE 3 ORGANISM_TAXID: 273057; SOURCE 4 STRAIN: P2; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET22B/NHIS-DPO4; SOURCE 9 MOL_ID: 2; SOURCE 10 SYNTHETIC: YES; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES KEYWDS DNA REPLICATION, MUTATOR PROTEIN, 06-BENZYLGUANINE, KEYWDS 2 NUCLEOTIDYLTRANSFERASE, DNA-DIRECTED DNA POLYMERASE, DPO4, KEYWDS 3 MAGNESIUM, POLYMERASE, DNA DAMAGE, DNA REPAIR, ALKYLATING AGENTS, KEYWDS 4 TRANSLESION SYNTHESIS, TRANSFERASE, DNA-BINDING, METAL-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR R.L.EOFF,K.C.ANGEL,I.D.KOSEKOV,M.EGLI,F.P.GUENGERICH REVDAT 5 13-DEC-23 2JEI 1 LINK REVDAT 4 08-MAY-19 2JEI 1 REMARK LINK REVDAT 3 24-FEB-09 2JEI 1 VERSN REVDAT 2 08-MAY-07 2JEI 1 JRNL REVDAT 1 13-MAR-07 2JEI 0 JRNL AUTH R.L.EOFF,K.C.ANGEL,M.EGLI,F.P.GUENGERICH JRNL TITL MOLECULAR BASIS OF SELECTIVITY OF NUCLEOSIDE TRIPHOSPHATE JRNL TITL 2 INCORPORATION OPPOSITE O6-BENZYLGUANINE BY SULFOLOBUS JRNL TITL 3 SOLFATARICUS DNA POLYMERASE DPO4: STEADY-STATE AND JRNL TITL 4 PRE-STEADY-STATE KINETICS AND X-RAY CRYSTALLOGRAPHY OF JRNL TITL 5 CORRECT AND INCORRECT PAIRING. JRNL REF J.BIOL.CHEM. V. 282 13573 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17337730 JRNL DOI 10.1074/JBC.M700656200 REMARK 2 REMARK 2 RESOLUTION. 2.39 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.1 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.39 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.10 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 57464.200 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 20842 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.236 REMARK 3 FREE R VALUE : 0.271 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 4.800 REMARK 3 FREE R VALUE TEST SET COUNT : 1009 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.009 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.39 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.54 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.10 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 3021 REMARK 3 BIN R VALUE (WORKING SET) : 0.3770 REMARK 3 BIN FREE R VALUE : 0.4150 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 4.60 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 147 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.034 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2764 REMARK 3 NUCLEIC ACID ATOMS : 616 REMARK 3 HETEROGEN ATOMS : 35 REMARK 3 SOLVENT ATOMS : 124 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 54.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 48.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 3.47000 REMARK 3 B22 (A**2) : 2.11000 REMARK 3 B33 (A**2) : -5.58000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.36 REMARK 3 ESD FROM SIGMAA (A) : 0.34 REMARK 3 LOW RESOLUTION CUTOFF (A) : 30.0 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 0.44 REMARK 3 ESD FROM C-V SIGMAA (A) : 0.43 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.007 REMARK 3 BOND ANGLES (DEGREES) : 1.500 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 23.80 REMARK 3 IMPROPER ANGLES (DEGREES) : 3.390 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : RESTRAINED REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.420 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 2.370 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.160 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.330 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.33 REMARK 3 BSOL : 41.88 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : DNA-RNA_REP1.PARAM REMARK 3 PARAMETER FILE 3 : DGTP.PARAM REMARK 3 PARAMETER FILE 4 : ION.PARAM REMARK 3 PARAMETER FILE 5 : WATER_REP.PARAM REMARK 3 PARAMETER FILE 6 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : DNA-RNA1.TOP REMARK 3 TOPOLOGY FILE 3 : DGTP.TOP REMARK 3 TOPOLOGY FILE 4 : ION.TOP REMARK 3 TOPOLOGY FILE 5 : WATER_REP.TOP REMARK 3 TOPOLOGY FILE 6 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JEI COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 17-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1290031140. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 25-JUL-06 REMARK 200 TEMPERATURE (KELVIN) : 110.0 REMARK 200 PH : 7.40 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : SI 111 DOUBLE CRYSTAL REMARK 200 OPTICS : PT COATED MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 20842 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.390 REMARK 200 RESOLUTION RANGE LOW (A) : 29.100 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 200 DATA REDUNDANCY : 14.70 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 42.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.39 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.49 REMARK 200 COMPLETENESS FOR SHELL (%) : 95.5 REMARK 200 DATA REDUNDANCY IN SHELL : 7.50 REMARK 200 R MERGE FOR SHELL (I) : 0.58000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.200 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: PDB ENTRY 2J6U REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 51.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.50 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% POLYETHYLENE GLYCOL (W/V), 100 MM REMARK 280 CALCIUM ACETATE, 25 MM TRIS HCL PH 7.4, 50 MM NACL, 5 MM CALCIUM REMARK 280 CHLORIDE, 1 MM DGTP, 2.5% GLYCEROL (V/V), AT 25 DEGREES CELSIUS., REMARK 280 PH 7.40, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 47.24600 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 51.85850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 47.24600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 51.85850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, P, T REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 ALA A 343 REMARK 465 ILE A 344 REMARK 465 GLY A 345 REMARK 465 LEU A 346 REMARK 465 ASP A 347 REMARK 465 LYS A 348 REMARK 465 PHE A 349 REMARK 465 PHE A 350 REMARK 465 ASP A 351 REMARK 465 THR A 352 REMARK 465 DT T 1 REMARK 465 DC T 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 342 CA C O CB CG CD OE1 REMARK 470 GLU A 342 OE2 REMARK 470 DA T 3 P OP1 OP2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 0 ND1 HIS A 0 CE1 0.496 REMARK 500 HIS A 0 CE1 HIS A 0 NE2 0.930 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 HIS A 0 CG - ND1 - CE1 ANGL. DEV. = 19.6 DEGREES REMARK 500 HIS A 0 ND1 - CE1 - NE2 ANGL. DEV. = -46.6 DEGREES REMARK 500 HIS A 0 CE1 - NE2 - CD2 ANGL. DEV. = 4.5 DEGREES REMARK 500 DG P 2 C1' - O4' - C4' ANGL. DEV. = -12.6 DEGREES REMARK 500 DT P 14 OP1 - P - OP2 ANGL. DEV. = -9.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 10 47.33 24.97 REMARK 500 PHE A 11 -67.45 -29.53 REMARK 500 ASN A 20 75.21 -154.28 REMARK 500 GLU A 38 -82.62 0.08 REMARK 500 LEU A 68 66.52 -119.97 REMARK 500 ASP A 105 23.24 -141.92 REMARK 500 ASP A 113 51.52 -112.91 REMARK 500 LYS A 114 -13.50 -141.63 REMARK 500 ASP A 117 172.15 75.68 REMARK 500 ILE A 175 -6.56 -59.04 REMARK 500 THR A 205 0.52 -60.19 REMARK 500 ASN A 234 45.05 -152.87 REMARK 500 ASP A 277 -132.76 62.86 REMARK 500 LEU A 293 41.55 29.32 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 HIS A 0 0.23 SIDE CHAIN REMARK 500 DG P 1 0.05 SIDE CHAIN REMARK 500 DG P 2 0.08 SIDE CHAIN REMARK 500 DC T 4 0.06 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1001 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 7 OD2 REMARK 620 2 PHE A 8 O 89.3 REMARK 620 3 ASP A 105 OD2 70.7 79.5 REMARK 620 4 DGT A2475 O2G 115.0 118.0 160.7 REMARK 620 5 DGT A2475 O1B 153.4 89.9 83.1 88.7 REMARK 620 6 DGT A2475 O3A 136.6 134.1 111.8 50.8 50.4 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1002 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 7 OD1 REMARK 620 2 ASP A 7 OD2 41.8 REMARK 620 3 ASP A 105 OD2 94.1 56.5 REMARK 620 4 ASP A 105 OD1 126.6 84.9 41.3 REMARK 620 5 GLU A 106 OE2 79.2 95.7 135.5 110.8 REMARK 620 6 HOH A2088 O 57.9 99.6 143.2 175.1 67.2 REMARK 620 7 DGT A2475 O2A 88.1 108.0 95.9 117.6 127.3 62.8 REMARK 620 8 DT P 14 O3' 156.3 146.4 90.1 69.5 113.3 106.9 68.3 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1003 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA A 181 O REMARK 620 2 ILE A 186 O 75.2 REMARK 620 3 HOH A2011 O 92.2 162.7 REMARK 620 4 HOH A2054 O 74.4 80.1 85.1 REMARK 620 5 HOH P2014 O 163.6 97.2 91.8 90.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A1000 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2085 O REMARK 620 2 DGT A2475 O1A 67.0 REMARK 620 3 DGT A2475 O2A 113.7 47.2 REMARK 620 4 DT P 14 OP2 119.6 170.1 126.7 REMARK 620 5 DT P 14 O5' 138.3 123.2 83.5 57.9 REMARK 620 6 HOH P2015 O 72.0 135.1 167.3 48.6 99.6 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A1000 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA A1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE DGT A2475 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1JX4 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A Y-FAMILY DNA POLYMERASE IN A TERNARYCOMPLEX REMARK 900 WITH DNA SUBSTRATES AND AN INCOMING NUCLEOTIDE REMARK 900 RELATED ID: 1JXL RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A Y-FAMILY DNA POLYMERASE IN A TERNARYCOMPLEX REMARK 900 WITH DNA SUBSTRATES AND AN INCOMING NUCLEOTIDE REMARK 900 RELATED ID: 1N48 RELATED DB: PDB REMARK 900 Y-FAMILY DNA POLYMERASE DPO4 IN COMPLEX WITH DNA CONTAININGABASIC REMARK 900 LESION REMARK 900 RELATED ID: 1N56 RELATED DB: PDB REMARK 900 Y-FAMILY DNA POLYMERASE DPO4 IN COMPLEX WITH DNA CONTAININGABASIC REMARK 900 LESION REMARK 900 RELATED ID: 1RYR RELATED DB: PDB REMARK 900 REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION REMARK 900 RELATED ID: 1RYS RELATED DB: PDB REMARK 900 REPLICATION OF A CIS-SYN THYMINE DIMER AT ATOMIC RESOLUTION REMARK 900 RELATED ID: 1S0M RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF A BENZO[A]PYRENE DIOL EPOXIDE ADDUCTIN A REMARK 900 TERNARY COMPLEX WITH A DNA POLYMERASE REMARK 900 RELATED ID: 1S0N RELATED DB: PDB REMARK 900 SNAPSHOTS OF REPLICATION THROUGH AN ABASIC LESION:STRUCTURAL BASIS REMARK 900 FOR BASE SUBSTITUTION AND FRAMESHIFT REMARK 900 RELATED ID: 1S0O RELATED DB: PDB REMARK 900 SNAPSHOTS OF REPLICATION THROUGH AN ABASIC LESION:STRUCTURAL BASIS REMARK 900 FOR BASE SUBSTITUTION AND FRAMESHIFT REMARK 900 RELATED ID: 1S10 RELATED DB: PDB REMARK 900 SNAPSHOTS OF REPLICATION THROUGH AN ABASIC LESION:STRUCTURAL BASIS REMARK 900 FOR BASE SUBSTITUTION AND FRAMESHIFT REMARK 900 RELATED ID: 1S97 RELATED DB: PDB REMARK 900 DPO4 WITH GT MISMATCH REMARK 900 RELATED ID: 1S9F RELATED DB: PDB REMARK 900 DPO WITH AT MATCHED REMARK 900 RELATED ID: 2AGO RELATED DB: PDB REMARK 900 FIDELITY OF DPO4: EFFECT OF METAL IONS, NUCLEOTIDESELECTION AND REMARK 900 PYROPHOSPHOROLYSIS REMARK 900 RELATED ID: 2AGP RELATED DB: PDB REMARK 900 FIDELITY OF DPO4: EFFECT OF METAL IONS, NUCLEOTIDESELECTION AND REMARK 900 PYROPHOSPHOROLYSIS REMARK 900 RELATED ID: 2AGQ RELATED DB: PDB REMARK 900 FIDELITY OF DPO4: EFFECT OF METAL IONS, NUCLEOTIDESELECTION AND REMARK 900 PYROPHOSPHOROLYSIS REMARK 900 RELATED ID: 2ASD RELATED DB: PDB REMARK 900 OXOG-MODIFIED INSERTION TERNARY COMPLEX REMARK 900 RELATED ID: 2ASJ RELATED DB: PDB REMARK 900 OXOG-MODIFIED PREINSERTION BINARY COMPLEX REMARK 900 RELATED ID: 2ASL RELATED DB: PDB REMARK 900 OXOG-MODIFIED POSTINSERTION BINARY COMPLEX REMARK 900 RELATED ID: 2ATL RELATED DB: PDB REMARK 900 UNMODIFIED INSERTION TERNARY COMPLEX REMARK 900 RELATED ID: 2AU0 RELATED DB: PDB REMARK 900 UNMODIFIED PREINSERTION BINARY COMPLEX REMARK 900 RELATED ID: 2BQ3 RELATED DB: PDB REMARK 900 DNA ADDUCT BYPASS POLYMERIZATION BY SULFOLOBUS SOLFATARICUS DPO4. REMARK 900 ANALYSIS AND CRYSTAL STRUCTURES OF MULTIPLE BASE-PAIR SUBSTITUTION REMARK 900 AND FRAMESHIFT PRODUCTS WITH THE ADDUCT 1 ,N2-ETHENOGUANINE REMARK 900 RELATED ID: 2BQR RELATED DB: PDB REMARK 900 DNA ADDUCT BYPASS POLYMERIZATION BY SULFOLOBUS SOLFATARICUS DPO4. REMARK 900 ANALYSIS AND CRYSTAL STRUCTURES OF MULTIPLE BASE-PAIR SUBSTITUTION REMARK 900 AND FRAMESHIFT PRODUCTS WITH THE ADDUCT 1 ,N2-ETHENOGUANINE REMARK 900 RELATED ID: 2BQU RELATED DB: PDB REMARK 900 DNA ADDUCT BYPASS POLYMERIZATION BY SULFOLOBUS SOLFATARICUS DPO4. REMARK 900 ANALYSIS AND CRYSTAL STRUCTURES OF MULTIPLE BASE-PAIR SUBSTITUTION REMARK 900 AND FRAMESHIFT PRODUCTS WITH THE ADDUCT 1 ,N2-ETHENOGUANINE REMARK 900 RELATED ID: 2BR0 RELATED DB: PDB REMARK 900 DNA ADDUCT BYPASS POLYMERIZATION BY SULFOLOBUS SOLFATARICUS DPO4. REMARK 900 ANALYSIS AND CRYSTAL STRUCTURES OF MULTIPLE BASE-PAIR SUBSTITUTION REMARK 900 AND FRAMESHIFT PRODUCTS WITH THE ADDUCT 1 ,N2-ETHENOGUANINE REMARK 900 RELATED ID: 2C22 RELATED DB: PDB REMARK 900 EFFICIENT AND HIGH FIDELITY INCORPORATION OF DCTP OPPOSITE 7,8- REMARK 900 DIHYDRO-8- OXODEOXYGUANOSINE BY SULFOLOBUS SOLFATARICUS DNA REMARK 900 POLYMERASE DPO4 REMARK 900 RELATED ID: 2C28 RELATED DB: PDB REMARK 900 EFFICIENT AND HIGH FIDELITY INCORPORATION OF DCTP OPPOSITE 7,8- REMARK 900 DIHYDRO-8- OXODEOXYGUANOSINE BY SULFOLOBUS SOLFATARICUS DNA REMARK 900 POLYMERASE DPO4 REMARK 900 RELATED ID: 2C2D RELATED DB: PDB REMARK 900 EFFICIENT AND HIGH FIDELITY INCORPORATION OF DCTP OPPOSITE 7,8- REMARK 900 DIHYDRO-8- OXODEOXYGUANOSINE BY SULFOLOBUS SOLFATARICUS DNA REMARK 900 POLYMERASE DPO4 REMARK 900 RELATED ID: 2C2E RELATED DB: PDB REMARK 900 EFFICIENT AND HIGH FIDELITY INCORPORATION OF DCTP OPPOSITE 7,8- REMARK 900 DIHYDRO-8- OXODEOXYGUANOSINE BY SULFOLOBUS SOLFATARICUS DNA REMARK 900 POLYMERASE DPO4 REMARK 900 RELATED ID: 2C2R RELATED DB: PDB REMARK 900 EFFICIENT AND HIGH FIDELITY INCORPORATION OF DCTP OPPOSITE 7,8- REMARK 900 DIHYDRO-8- OXODEOXYGUANOSINE BY SULFOLOBUS SOLFATARICUS DNA REMARK 900 POLYMERASE DPO4 REMARK 900 RELATED ID: 2J6S RELATED DB: PDB REMARK 900 TERNARY COMPLEX OF SULFOLOBUS SOLFATARICUS DPO4 DNA POLYMERASE, O6- REMARK 900 METHYLGUANINE MODIFIED DNA, AND DATP. REMARK 900 RELATED ID: 2J6T RELATED DB: PDB REMARK 900 TERNARY COMPLEX OF SULFOLOBUS SOLFATARICUS DPO4 DNA POLYMERASE, O6- REMARK 900 METHYLGUANINE MODIFIED DNA, AND DATP. REMARK 900 RELATED ID: 2J6U RELATED DB: PDB REMARK 900 TERNARY COMPLEX OF SULFOLOBUS SOLFATARICUS DPO4 DNA POLYMERASE, O6- REMARK 900 METHYLGUANINE MODIFIED DNA, AND DGTP. REMARK 900 RELATED ID: 2JEF RELATED DB: PDB REMARK 900 THE MOLECULAR BASIS OF SELECTIVITY OF NUCLEOTIDE TRIPHOSPHATE REMARK 900 INCORPORATION OPPOSITE O6-BENZYLGUANINE BY SULFOLOBUS SOLFATARICUS REMARK 900 DNA POLYMERASE IV: STEADY-STATE AND PRE- STEADY-STATE AND X-RAY REMARK 900 CRYSTALLOGRAPHY OF CORRECT AND INCORRECT PAIRING REMARK 900 RELATED ID: 2JEG RELATED DB: PDB REMARK 900 THE MOLECULAR BASIS OF SELECTIVITY OF NUCLEOSIDE TRIPHOSPHATE REMARK 900 INCORPORATION OPPOSITE O6-BENZYLGUANINE BY SULFOLOBUS SOLFATARICUS REMARK 900 DNA POLYMERASE IV: STEADY-STATE AND PRE- STEADY-STATE KINETICS AND REMARK 900 X-RAY CRYSTALLOGRAPHY OF CORRECT AND INCORRECT PAIRING REMARK 900 RELATED ID: 2JEJ RELATED DB: PDB REMARK 900 THE MOLECULAR BASIS OF SELECTIVITY OF NUCLEOSIDE TRIPHOSPHATE REMARK 900 INCORPORATION OPPOSITE O6-BENZYLGUANINE BY SULFOLOBUS SOLFATARICUS REMARK 900 DNA POLYMERASE IV: STEADY-STATE AND PRE- STEADY-STATE KINETICS AND REMARK 900 X-RAY CRYSTALLOGRAPHY OF CORRECT AND INCORRECT PAIRING REMARK 999 REMARK 999 SEQUENCE REMARK 999 6 HISTIDINES ADDED TO N-TERMINUS AND LAST 11 RESIDUES REMARK 999 MISSING BECAUSE OF DISORDER. DBREF 2JEI A -5 0 PDB 2JEI 2JEI -5 0 DBREF 2JEI A 1 352 UNP Q97W02 DPO42_SULSO 1 352 DBREF 2JEI P 1 14 PDB 2JEI 2JEI 1 14 DBREF 2JEI T 1 18 PDB 2JEI 2JEI 1 18 SEQRES 1 A 358 HIS HIS HIS HIS HIS HIS MET ILE VAL LEU PHE VAL ASP SEQRES 2 A 358 PHE ASP TYR PHE TYR ALA GLN VAL GLU GLU VAL LEU ASN SEQRES 3 A 358 PRO SER LEU LYS GLY LYS PRO VAL VAL VAL CYS VAL PHE SEQRES 4 A 358 SER GLY ARG PHE GLU ASP SER GLY ALA VAL ALA THR ALA SEQRES 5 A 358 ASN TYR GLU ALA ARG LYS PHE GLY VAL LYS ALA GLY ILE SEQRES 6 A 358 PRO ILE VAL GLU ALA LYS LYS ILE LEU PRO ASN ALA VAL SEQRES 7 A 358 TYR LEU PRO MET ARG LYS GLU VAL TYR GLN GLN VAL SER SEQRES 8 A 358 SER ARG ILE MET ASN LEU LEU ARG GLU TYR SER GLU LYS SEQRES 9 A 358 ILE GLU ILE ALA SER ILE ASP GLU ALA TYR LEU ASP ILE SEQRES 10 A 358 SER ASP LYS VAL ARG ASP TYR ARG GLU ALA TYR ASN LEU SEQRES 11 A 358 GLY LEU GLU ILE LYS ASN LYS ILE LEU GLU LYS GLU LYS SEQRES 12 A 358 ILE THR VAL THR VAL GLY ILE SER LYS ASN LYS VAL PHE SEQRES 13 A 358 ALA LYS ILE ALA ALA ASP MET ALA LYS PRO ASN GLY ILE SEQRES 14 A 358 LYS VAL ILE ASP ASP GLU GLU VAL LYS ARG LEU ILE ARG SEQRES 15 A 358 GLU LEU ASP ILE ALA ASP VAL PRO GLY ILE GLY ASN ILE SEQRES 16 A 358 THR ALA GLU LYS LEU LYS LYS LEU GLY ILE ASN LYS LEU SEQRES 17 A 358 VAL ASP THR LEU SER ILE GLU PHE ASP LYS LEU LYS GLY SEQRES 18 A 358 MET ILE GLY GLU ALA LYS ALA LYS TYR LEU ILE SER LEU SEQRES 19 A 358 ALA ARG ASP GLU TYR ASN GLU PRO ILE ARG THR ARG VAL SEQRES 20 A 358 ARG LYS SER ILE GLY ARG ILE VAL THR MET LYS ARG ASN SEQRES 21 A 358 SER ARG ASN LEU GLU GLU ILE LYS PRO TYR LEU PHE ARG SEQRES 22 A 358 ALA ILE GLU GLU SER TYR TYR LYS LEU ASP LYS ARG ILE SEQRES 23 A 358 PRO LYS ALA ILE HIS VAL VAL ALA VAL THR GLU ASP LEU SEQRES 24 A 358 ASP ILE VAL SER ARG GLY ARG THR PHE PRO HIS GLY ILE SEQRES 25 A 358 SER LYS GLU THR ALA TYR SER GLU SER VAL LYS LEU LEU SEQRES 26 A 358 GLN LYS ILE LEU GLU GLU ASP GLU ARG LYS ILE ARG ARG SEQRES 27 A 358 ILE GLY VAL ARG PHE SER LYS PHE ILE GLU ALA ILE GLY SEQRES 28 A 358 LEU ASP LYS PHE PHE ASP THR SEQRES 1 P 14 DG DG DG DG DG DA DA DG DG DA DT DT DC SEQRES 2 P 14 DT SEQRES 1 T 18 DT DC DA DC BZG DG DA DA DT DC DC DT DT SEQRES 2 T 18 DC DC DC DC DC HET BZG T 5 29 HET CA A1000 1 HET CA A1001 1 HET CA A1002 1 HET CA A1003 1 HET DGT A2475 31 HETNAM BZG 6-(BENZYLOXY)-9-(2-DEOXY-5-O-PHOSPHONO-BETA-D-ERYTHRO- HETNAM 2 BZG PENTOFURANOSYL)-9H-PURIN-2-AMINE HETNAM CA CALCIUM ION HETNAM DGT 2'-DEOXYGUANOSINE-5'-TRIPHOSPHATE HETSYN BZG O6-BENZYL-2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE FORMUL 3 BZG C17 H20 N5 O7 P FORMUL 4 CA 4(CA 2+) FORMUL 8 DGT C10 H16 N5 O13 P3 FORMUL 9 HOH *124(H2 O) HELIX 1 1 TYR A 10 ASN A 20 1 11 HELIX 2 2 PRO A 21 LYS A 24 5 4 HELIX 3 3 ASN A 47 LYS A 52 1 6 HELIX 4 4 PRO A 60 LEU A 68 1 9 HELIX 5 5 ARG A 77 GLU A 94 1 18 HELIX 6 6 ARG A 116 LYS A 137 1 22 HELIX 7 7 ASN A 147 LYS A 159 1 13 HELIX 8 8 ASP A 167 LEU A 178 1 12 HELIX 9 9 ILE A 180 VAL A 183 5 4 HELIX 10 10 GLY A 187 LEU A 197 1 11 HELIX 11 11 LEU A 202 SER A 207 5 6 HELIX 12 12 GLU A 209 GLY A 218 1 10 HELIX 13 13 GLY A 218 ARG A 230 1 13 HELIX 14 14 ASN A 257 ASP A 277 1 21 HELIX 15 15 SER A 307 ASP A 326 1 20 SHEET 1 AA 5 ILE A 99 SER A 103 0 SHEET 2 AA 5 GLU A 106 ASP A 110 -1 O GLU A 106 N SER A 103 SHEET 3 AA 5 VAL A 3 PHE A 8 -1 O LEU A 4 N LEU A 109 SHEET 4 AA 5 VAL A 140 SER A 145 -1 O THR A 141 N ASP A 7 SHEET 5 AA 5 ILE A 163 VAL A 165 1 O LYS A 164 N ILE A 144 SHEET 1 AB 3 GLY A 41 ALA A 46 0 SHEET 2 AB 3 VAL A 28 PHE A 33 -1 O VAL A 30 N ALA A 44 SHEET 3 AB 3 VAL A 72 PRO A 75 1 O VAL A 72 N VAL A 29 SHEET 1 AC 4 SER A 244 SER A 255 0 SHEET 2 AC 4 ILE A 330 PHE A 340 -1 O ILE A 330 N SER A 255 SHEET 3 AC 4 PRO A 281 THR A 290 -1 N LYS A 282 O SER A 338 SHEET 4 AC 4 ILE A 295 THR A 301 -1 O VAL A 296 N ALA A 288 LINK O3' DC T 4 P BZG T 5 1555 1555 1.59 LINK O3' BZG T 5 P DG T 6 1555 1555 1.60 LINK OD2 ASP A 7 CA CA A1001 1555 1555 2.58 LINK OD1 ASP A 7 CA CA A1002 1555 1555 3.24 LINK OD2 ASP A 7 CA CA A1002 1555 1555 2.79 LINK O PHE A 8 CA CA A1001 1555 1555 2.42 LINK OD2 ASP A 105 CA CA A1001 1555 1555 2.46 LINK OD2 ASP A 105 CA CA A1002 1555 1555 3.30 LINK OD1 ASP A 105 CA CA A1002 1555 1555 2.60 LINK OE2 GLU A 106 CA CA A1002 1555 1555 2.61 LINK O ALA A 181 CA CA A1003 1555 1555 2.69 LINK O ILE A 186 CA CA A1003 1555 1555 2.74 LINK CA CA A1000 O HOH A2085 1555 1555 3.02 LINK CA CA A1000 O1A DGT A2475 1555 1555 2.93 LINK CA CA A1000 O2A DGT A2475 1555 1555 3.37 LINK CA CA A1000 OP2 DT P 14 1555 1555 2.83 LINK CA CA A1000 O5' DT P 14 1555 1555 2.31 LINK CA CA A1000 O HOH P2015 1555 1555 2.72 LINK CA CA A1001 O2G DGT A2475 1555 1555 2.45 LINK CA CA A1001 O1B DGT A2475 1555 1555 2.82 LINK CA CA A1001 O3A DGT A2475 1555 1555 2.68 LINK CA CA A1002 O HOH A2088 1555 1555 2.60 LINK CA CA A1002 O2A DGT A2475 1555 1555 2.49 LINK CA CA A1002 O3' DT P 14 1555 1555 2.99 LINK CA CA A1003 O HOH A2011 1555 1555 2.72 LINK CA CA A1003 O HOH A2054 1555 1555 2.55 LINK CA CA A1003 O HOH P2014 1555 1555 2.64 CISPEP 1 LYS A 159 PRO A 160 0 0.25 SITE 1 AC1 4 HOH A2085 DGT A2475 DT P 14 HOH P2015 SITE 1 AC2 5 ASP A 7 PHE A 8 ASP A 105 CA A1002 SITE 2 AC2 5 DGT A2475 SITE 1 AC3 7 ASP A 7 ASP A 105 GLU A 106 CA A1001 SITE 2 AC3 7 HOH A2088 DGT A2475 DT P 14 SITE 1 AC4 5 ALA A 181 ILE A 186 HOH A2011 HOH A2054 SITE 2 AC4 5 HOH P2014 SITE 1 AC5 20 TYR A 10 PHE A 11 TYR A 12 ALA A 44 SITE 2 AC5 20 THR A 45 TYR A 48 ARG A 51 ASP A 105 SITE 3 AC5 20 LYS A 159 CA A1000 CA A1001 CA A1002 SITE 4 AC5 20 HOH A2084 HOH A2085 HOH A2086 HOH A2087 SITE 5 AC5 20 HOH A2088 DT P 14 DC T 4 BZG T 5 CRYST1 94.492 103.717 52.621 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010583 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009642 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019004 0.00000 TER 2765 GLU A 342 TER 3059 DT P 14 HETATM 3097 P BZG T 5 41.092 37.095 14.351 1.00 49.45 P HETATM 3098 O1P BZG T 5 41.742 38.352 14.809 1.00 49.35 O HETATM 3099 O2P BZG T 5 41.748 35.892 14.909 1.00 51.63 O HETATM 3100 O5' BZG T 5 39.545 37.130 14.792 1.00 50.51 O HETATM 3101 CZ1 BZG T 5 34.505 28.941 11.871 1.00 69.93 C HETATM 3102 CT1 BZG T 5 34.507 27.671 11.310 1.00 71.74 C HETATM 3103 CI BZG T 5 34.288 27.517 9.942 1.00 72.54 C HETATM 3104 CT2 BZG T 5 34.068 28.632 9.145 1.00 70.84 C HETATM 3105 CZ2 BZG T 5 34.065 29.904 9.709 1.00 68.96 C HETATM 3106 CE BZG T 5 34.283 30.057 11.073 1.00 67.88 C HETATM 3107 CW BZG T 5 34.267 31.324 11.648 1.00 65.46 C HETATM 3108 OL BZG T 5 33.393 32.340 11.136 1.00 60.09 O HETATM 3109 CK BZG T 5 33.395 33.452 11.923 1.00 57.02 C HETATM 3110 NJ BZG T 5 32.288 34.204 11.999 1.00 55.42 N HETATM 3111 CH BZG T 5 32.260 35.326 12.733 1.00 55.16 C HETATM 3112 NI BZG T 5 31.142 36.049 12.788 1.00 55.43 N HETATM 3113 NG BZG T 5 33.339 35.731 13.413 1.00 55.00 N HETATM 3114 CF BZG T 5 34.471 35.015 13.376 1.00 54.37 C HETATM 3115 CM BZG T 5 34.527 33.849 12.627 1.00 55.29 C HETATM 3116 NN BZG T 5 35.748 33.344 12.786 1.00 54.80 N HETATM 3117 CO BZG T 5 36.432 34.151 13.592 1.00 52.97 C HETATM 3118 NE BZG T 5 35.659 35.173 13.955 1.00 53.03 N HETATM 3119 CT' BZG T 5 36.027 36.296 14.844 1.00 54.68 C HETATM 3120 OS' BZG T 5 36.792 37.302 14.164 1.00 53.78 O HETATM 3121 CP' BZG T 5 36.956 35.907 15.992 1.00 55.12 C HETATM 3122 C5' BZG T 5 38.839 38.361 14.814 1.00 53.25 C HETATM 3123 C4' BZG T 5 37.382 38.113 15.197 1.00 54.22 C HETATM 3124 C3' BZG T 5 37.238 37.319 16.499 1.00 54.09 C HETATM 3125 O3' BZG T 5 36.117 37.822 17.227 1.00 54.42 O TER 3383 DC T 18 HETATM 3384 CA CA A1000 25.083 34.530 6.717 1.00 94.40 CA HETATM 3385 CA CA A1001 22.439 40.622 5.894 1.00 35.08 CA HETATM 3386 CA CA A1002 21.860 38.350 8.473 1.00 49.62 CA HETATM 3387 CA CA A1003 22.616 25.405 4.590 1.00 56.67 CA HETATM 3388 PG DGT A2475 23.639 39.674 2.700 1.00 37.30 P HETATM 3389 O1G DGT A2475 24.176 38.321 2.015 1.00 41.82 O HETATM 3390 O2G DGT A2475 22.741 39.176 3.938 1.00 38.15 O HETATM 3391 O3G DGT A2475 22.859 40.511 1.759 1.00 42.51 O HETATM 3392 O3B DGT A2475 24.964 40.425 3.228 1.00 42.67 O HETATM 3393 PB DGT A2475 25.571 40.325 4.718 1.00 37.52 P HETATM 3394 O1B DGT A2475 25.151 41.372 5.676 1.00 43.25 O HETATM 3395 O2B DGT A2475 26.837 39.565 4.776 1.00 46.25 O HETATM 3396 O3A DGT A2475 24.567 39.152 5.184 1.00 46.27 O HETATM 3397 PA DGT A2475 24.740 38.257 6.515 1.00 40.79 P HETATM 3398 O1A DGT A2475 25.977 37.273 6.220 1.00 47.73 O HETATM 3399 O2A DGT A2475 23.503 37.501 6.811 1.00 50.21 O HETATM 3400 O5' DGT A2475 25.232 39.203 7.720 1.00 43.43 O HETATM 3401 C5' DGT A2475 26.485 39.831 7.460 1.00 43.11 C HETATM 3402 C4' DGT A2475 27.193 40.466 8.651 1.00 40.44 C HETATM 3403 O4' DGT A2475 27.567 39.509 9.658 1.00 39.61 O HETATM 3404 C3' DGT A2475 28.487 40.824 7.923 1.00 40.98 C HETATM 3405 O3' DGT A2475 28.351 42.145 7.392 1.00 42.35 O HETATM 3406 C2' DGT A2475 29.456 40.795 9.100 1.00 40.62 C HETATM 3407 C1' DGT A2475 29.003 39.500 9.779 1.00 38.67 C HETATM 3408 N9 DGT A2475 29.550 38.287 9.125 1.00 35.27 N HETATM 3409 C8 DGT A2475 28.894 37.475 8.299 1.00 35.61 C HETATM 3410 N7 DGT A2475 29.671 36.446 7.966 1.00 33.67 N HETATM 3411 C5 DGT A2475 30.834 36.604 8.581 1.00 32.98 C HETATM 3412 C6 DGT A2475 32.014 35.850 8.604 1.00 32.26 C HETATM 3413 O6 DGT A2475 32.086 34.784 8.006 1.00 34.90 O HETATM 3414 N1 DGT A2475 33.096 36.314 9.362 1.00 30.73 N HETATM 3415 C2 DGT A2475 32.968 37.511 10.079 1.00 31.63 C HETATM 3416 N2 DGT A2475 33.997 37.963 10.790 1.00 30.43 N HETATM 3417 N3 DGT A2475 31.817 38.200 10.038 1.00 31.95 N HETATM 3418 C4 DGT A2475 30.767 37.776 9.317 1.00 31.97 C HETATM 3419 O HOH A2001 -9.149 36.528 12.831 1.00 76.81 O HETATM 3420 O HOH A2002 -5.373 34.692 14.878 1.00 46.93 O HETATM 3421 O HOH A2003 -3.811 37.305 11.817 1.00 41.22 O HETATM 3422 O HOH A2004 -9.327 38.859 9.324 1.00 66.40 O HETATM 3423 O HOH A2005 -3.977 33.294 10.218 1.00 60.36 O HETATM 3424 O HOH A2006 41.078 52.661 5.856 1.00 60.90 O HETATM 3425 O HOH A2007 28.112 26.398 41.482 1.00 59.42 O HETATM 3426 O HOH A2008 39.580 43.551 13.064 1.00 35.46 O HETATM 3427 O HOH A2009 36.897 43.660 40.038 1.00 46.76 O HETATM 3428 O HOH A2010 18.730 36.059 6.030 1.00 45.32 O HETATM 3429 O HOH A2011 22.263 27.433 2.816 1.00 51.82 O HETATM 3430 O HOH A2012 38.710 52.803 8.254 1.00 49.31 O HETATM 3431 O HOH A2013 20.448 46.167 19.236 1.00 52.00 O HETATM 3432 O HOH A2014 27.291 39.875 16.615 1.00 51.60 O HETATM 3433 O HOH A2015 25.601 50.237 -4.243 1.00 60.86 O HETATM 3434 O HOH A2016 33.421 54.306 4.892 1.00 45.02 O HETATM 3435 O HOH A2017 24.969 52.500 0.020 1.00 54.80 O HETATM 3436 O HOH A2018 36.532 54.734 3.678 1.00 54.53 O HETATM 3437 O HOH A2019 40.916 43.941 11.131 1.00 34.60 O HETATM 3438 O HOH A2020 51.595 42.336 9.181 1.00 67.45 O HETATM 3439 O HOH A2021 48.283 31.354 10.746 1.00 65.91 O HETATM 3440 O HOH A2022 44.707 36.682 3.513 1.00 37.71 O HETATM 3441 O HOH A2023 46.826 40.912 8.472 1.00 35.31 O HETATM 3442 O HOH A2024 45.928 34.776 5.619 1.00 57.23 O HETATM 3443 O HOH A2025 26.852 36.631 -8.620 1.00 48.68 O HETATM 3444 O HOH A2026 26.016 36.848 -5.799 1.00 58.38 O HETATM 3445 O HOH A2027 28.430 29.112 -4.664 1.00 47.72 O HETATM 3446 O HOH A2028 46.766 32.813 -10.550 1.00 47.56 O HETATM 3447 O HOH A2029 42.745 35.448 -10.016 1.00 37.58 O HETATM 3448 O HOH A2030 43.204 47.394 -4.099 1.00 54.71 O HETATM 3449 O HOH A2031 40.070 44.550 -9.431 1.00 36.49 O HETATM 3450 O HOH A2032 43.290 49.933 -8.037 1.00 51.41 O HETATM 3451 O HOH A2033 47.069 45.832 -10.315 1.00 42.17 O HETATM 3452 O HOH A2034 42.164 49.711 -0.193 1.00 54.16 O HETATM 3453 O HOH A2035 37.104 50.467 7.948 1.00 40.48 O HETATM 3454 O HOH A2036 36.502 45.311 15.084 1.00 45.25 O HETATM 3455 O HOH A2037 22.015 45.358 16.989 1.00 52.61 O HETATM 3456 O HOH A2038 18.931 49.075 21.005 1.00 54.84 O HETATM 3457 O HOH A2039 18.018 43.425 23.892 1.00 65.60 O HETATM 3458 O HOH A2040 22.882 42.395 17.994 1.00 56.77 O HETATM 3459 O HOH A2041 26.134 38.374 14.214 1.00 36.34 O HETATM 3460 O HOH A2042 22.081 34.553 11.531 1.00 62.37 O HETATM 3461 O HOH A2043 18.004 34.218 12.346 1.00 35.43 O HETATM 3462 O HOH A2044 14.339 30.963 14.165 1.00 60.00 O HETATM 3463 O HOH A2045 5.549 35.355 18.905 1.00 51.97 O HETATM 3464 O HOH A2046 22.719 56.244 8.786 1.00 36.53 O HETATM 3465 O HOH A2047 20.902 60.954 1.495 1.00 60.37 O HETATM 3466 O HOH A2048 19.439 63.521 2.233 1.00 66.79 O HETATM 3467 O HOH A2049 15.651 49.881 3.835 1.00 40.38 O HETATM 3468 O HOH A2050 2.588 35.708 -2.529 1.00 62.53 O HETATM 3469 O HOH A2051 1.624 32.292 5.020 1.00 64.90 O HETATM 3470 O HOH A2052 3.689 24.366 -9.165 1.00 65.18 O HETATM 3471 O HOH A2053 16.989 29.612 2.480 1.00 43.87 O HETATM 3472 O HOH A2054 20.676 26.469 5.861 1.00 37.05 O HETATM 3473 O HOH A2055 27.966 24.661 7.462 1.00 53.26 O HETATM 3474 O HOH A2056 20.361 5.940 12.391 1.00 42.82 O HETATM 3475 O HOH A2057 23.772 12.700 16.557 1.00 59.92 O HETATM 3476 O HOH A2058 17.903 22.575 16.099 1.00 63.48 O HETATM 3477 O HOH A2059 10.746 40.121 27.140 1.00 68.77 O HETATM 3478 O HOH A2060 9.428 38.021 24.967 1.00 47.56 O HETATM 3479 O HOH A2061 15.972 32.050 20.946 1.00 65.12 O HETATM 3480 O HOH A2062 20.294 40.660 21.124 1.00 52.41 O HETATM 3481 O HOH A2063 23.246 39.891 29.442 1.00 55.10 O HETATM 3482 O HOH A2064 21.800 41.431 26.274 1.00 65.99 O HETATM 3483 O HOH A2065 53.300 29.810 12.666 1.00 47.52 O HETATM 3484 O HOH A2066 56.591 27.010 20.924 1.00 50.25 O HETATM 3485 O HOH A2067 48.640 41.888 27.009 1.00 40.80 O HETATM 3486 O HOH A2068 53.936 35.463 18.440 1.00 53.13 O HETATM 3487 O HOH A2069 41.011 47.214 25.970 1.00 54.14 O HETATM 3488 O HOH A2070 33.853 44.910 33.550 1.00 55.58 O HETATM 3489 O HOH A2071 32.394 30.601 29.838 1.00 33.69 O HETATM 3490 O HOH A2072 37.657 26.796 12.842 1.00 65.13 O HETATM 3491 O HOH A2073 38.133 18.458 14.422 1.00 65.68 O HETATM 3492 O HOH A2074 27.817 28.648 39.943 1.00 51.60 O HETATM 3493 O HOH A2075 38.573 31.710 44.077 1.00 54.99 O HETATM 3494 O HOH A2076 37.421 42.220 38.350 1.00 51.82 O HETATM 3495 O HOH A2077 45.499 37.858 39.032 1.00 39.31 O HETATM 3496 O HOH A2078 36.847 36.005 41.821 1.00 40.27 O HETATM 3497 O HOH A2079 41.470 24.493 36.988 1.00 44.90 O HETATM 3498 O HOH A2080 42.235 30.345 40.062 1.00 51.51 O HETATM 3499 O HOH A2081 39.604 33.388 16.019 1.00 43.43 O HETATM 3500 O HOH A2082 28.875 28.143 30.462 1.00 49.17 O HETATM 3501 O HOH A2083 20.684 38.346 37.703 1.00 51.23 O HETATM 3502 O HOH A2084 30.964 32.950 6.244 1.00 51.13 O HETATM 3503 O HOH A2085 28.076 34.754 6.371 1.00 39.89 O HETATM 3504 O HOH A2086 31.586 39.656 12.357 1.00 39.00 O HETATM 3505 O HOH A2087 27.727 36.076 4.253 1.00 39.88 O HETATM 3506 O HOH A2088 21.195 36.235 7.124 1.00 45.49 O HETATM 3507 O HOH P2001 19.683 11.347 31.670 1.00 54.32 O HETATM 3508 O HOH P2002 37.668 19.537 34.839 1.00 56.31 O HETATM 3509 O HOH P2003 13.415 4.874 38.756 1.00 45.35 O HETATM 3510 O HOH P2004 18.003 12.073 42.268 1.00 56.97 O HETATM 3511 O HOH P2005 21.053 9.678 33.744 1.00 54.01 O HETATM 3512 O HOH P2006 21.063 21.072 41.308 1.00 64.47 O HETATM 3513 O HOH P2007 10.865 20.630 39.983 1.00 47.11 O HETATM 3514 O HOH P2008 34.070 15.188 29.469 1.00 55.19 O HETATM 3515 O HOH P2009 39.003 22.295 32.971 1.00 44.79 O HETATM 3516 O HOH P2010 30.920 24.716 25.436 1.00 46.31 O HETATM 3517 O HOH P2011 38.503 18.034 17.607 1.00 62.30 O HETATM 3518 O HOH P2012 20.505 28.270 12.927 1.00 63.69 O HETATM 3519 O HOH P2013 20.617 29.839 8.375 1.00 55.39 O HETATM 3520 O HOH P2014 24.330 26.824 6.001 1.00 51.77 O HETATM 3521 O HOH P2015 26.048 32.052 6.131 1.00 67.26 O HETATM 3522 O HOH T2001 23.421 32.736 14.531 1.00 57.71 O HETATM 3523 O HOH T2002 33.569 28.811 24.254 1.00 48.15 O HETATM 3524 O HOH T2003 40.551 30.595 8.309 1.00 58.58 O HETATM 3525 O HOH T2004 40.337 29.329 4.193 1.00 60.18 O HETATM 3526 O HOH T2005 44.036 39.043 15.866 1.00 37.74 O HETATM 3527 O HOH T2006 36.755 30.868 12.842 1.00 54.42 O HETATM 3528 O HOH T2007 24.434 33.021 17.040 1.00 51.93 O HETATM 3529 O HOH T2008 31.605 29.018 21.268 1.00 52.87 O HETATM 3530 O HOH T2009 24.945 29.483 27.027 1.00 49.74 O HETATM 3531 O HOH T2010 20.024 23.057 24.367 1.00 56.98 O HETATM 3532 O HOH T2011 16.492 20.321 23.475 1.00 62.01 O HETATM 3533 O HOH T2012 13.456 25.085 22.735 1.00 62.62 O HETATM 3534 O HOH T2013 19.936 17.458 17.322 1.00 40.22 O HETATM 3535 O HOH T2014 31.742 14.104 25.777 1.00 52.42 O HETATM 3536 O HOH T2015 24.754 9.043 25.812 1.00 62.83 O HETATM 3537 O HOH T2016 31.693 5.652 26.030 1.00 67.35 O HETATM 3538 O HOH T2017 29.741 7.317 35.852 1.00 54.90 O HETATM 3539 O HOH T2018 25.660 7.943 33.704 1.00 54.87 O HETATM 3540 O HOH T2019 33.232 15.536 43.626 1.00 77.20 O HETATM 3541 O HOH T2020 22.069 9.691 48.914 1.00 57.19 O HETATM 3542 O HOH T2021 15.497 7.838 44.751 1.00 56.28 O CONECT 76 3386 CONECT 77 3385 3386 CONECT 81 3385 CONECT 853 3386 CONECT 854 3385 3386 CONECT 863 3386 CONECT 1461 3387 CONECT 1492 3387 CONECT 3041 3384 CONECT 3042 3384 CONECT 3047 3386 CONECT 3086 3097 CONECT 3097 3086 3098 3099 3100 CONECT 3098 3097 CONECT 3099 3097 CONECT 3100 3097 3122 CONECT 3101 3102 3106 CONECT 3102 3101 3103 CONECT 3103 3102 3104 CONECT 3104 3103 3105 CONECT 3105 3104 3106 CONECT 3106 3101 3105 3107 CONECT 3107 3106 3108 CONECT 3108 3107 3109 CONECT 3109 3108 3110 3115 CONECT 3110 3109 3111 CONECT 3111 3110 3112 3113 CONECT 3112 3111 CONECT 3113 3111 3114 CONECT 3114 3113 3115 3118 CONECT 3115 3109 3114 3116 CONECT 3116 3115 3117 CONECT 3117 3116 3118 CONECT 3118 3114 3117 3119 CONECT 3119 3118 3120 3121 CONECT 3120 3119 3123 CONECT 3121 3119 3124 CONECT 3122 3100 3123 CONECT 3123 3120 3122 3124 CONECT 3124 3121 3123 3125 CONECT 3125 3124 3126 CONECT 3126 3125 CONECT 3384 3041 3042 3398 3399 CONECT 3384 3503 3521 CONECT 3385 77 81 854 3390 CONECT 3385 3394 3396 CONECT 3386 76 77 853 854 CONECT 3386 863 3047 3399 3506 CONECT 3387 1461 1492 3429 3472 CONECT 3387 3520 CONECT 3388 3389 3390 3391 3392 CONECT 3389 3388 CONECT 3390 3385 3388 CONECT 3391 3388 CONECT 3392 3388 3393 CONECT 3393 3392 3394 3395 3396 CONECT 3394 3385 3393 CONECT 3395 3393 CONECT 3396 3385 3393 3397 CONECT 3397 3396 3398 3399 3400 CONECT 3398 3384 3397 CONECT 3399 3384 3386 3397 CONECT 3400 3397 3401 CONECT 3401 3400 3402 CONECT 3402 3401 3403 3404 CONECT 3403 3402 3407 CONECT 3404 3402 3405 3406 CONECT 3405 3404 CONECT 3406 3404 3407 CONECT 3407 3403 3406 3408 CONECT 3408 3407 3409 3418 CONECT 3409 3408 3410 CONECT 3410 3409 3411 CONECT 3411 3410 3412 3418 CONECT 3412 3411 3413 3414 CONECT 3413 3412 CONECT 3414 3412 3415 CONECT 3415 3414 3416 3417 CONECT 3416 3415 CONECT 3417 3415 3418 CONECT 3418 3408 3411 3417 CONECT 3429 3387 CONECT 3472 3387 CONECT 3503 3384 CONECT 3506 3386 CONECT 3520 3387 CONECT 3521 3384 MASTER 534 0 6 15 12 0 12 6 3539 3 87 32 END