HEADER HYDROLASE 18-JAN-07 2JEN TITLE FAMILY 12 XYLOGLUCANASE FROM BACILLUS LICHENIFORMIS IN COMPLEX WITH TITLE 2 LIGAND CAVEAT 2JEN GLC B 1 HAS WRONG CHIRALITY AT ATOM C1 GLC B 2 HAS WRONG CAVEAT 2 2JEN CHIRALITY AT ATOM C1 GLC C 1 HAS WRONG CHIRALITY AT ATOM C1 CAVEAT 3 2JEN GLC C 2 HAS WRONG CHIRALITY AT ATOM C1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ENDO-BETA-1,4-GLUCANASE; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: XYLOGLUCANASE; COMPND 5 EC: 3.2.1.4, 3.2.1.151; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS LICHENIFORMIS; SOURCE 3 ORGANISM_TAXID: 1402; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS PLANT CELL WALL, GLYCOSIDASE, XYLOGLUCANASE, HYDROLASE, FAMILY 12 EXPDTA X-RAY DIFFRACTION AUTHOR T.M.GLOSTER,F.M.IBATULLIN,K.MACAULEY,J.M.EKLOF,S.ROBERTS, AUTHOR 2 J.P.TURKENBURG,M.E.BJORNVAD,P.L.JORGENSEN,S.DANIELSEN,K.S.JOHANSEN, AUTHOR 3 T.V.BORCHERT,K.S.WILSON,H.BRUMER,G.J.DAVIES REVDAT 5 13-DEC-23 2JEN 1 HETSYN REVDAT 4 29-JUL-20 2JEN 1 CAVEAT COMPND REMARK HETNAM REVDAT 4 2 1 LINK SITE ATOM REVDAT 3 24-FEB-09 2JEN 1 VERSN REVDAT 2 03-JUL-07 2JEN 1 JRNL REVDAT 1 20-MAR-07 2JEN 0 JRNL AUTH T.M.GLOSTER,F.M.IBATULLIN,K.MACAULEY,J.M.EKLOF,S.ROBERTS, JRNL AUTH 2 J.P.TURKENBURG,M.E.BJORNVAD,P.L.JORGENSEN,S.DANIELSEN, JRNL AUTH 3 K.S.JOHANSEN,T.V.BORCHERT,K.S.WILSON,H.BRUMER,G.J.DAVIES JRNL TITL CHARACTERIZATION AND THREE-DIMENSIONAL STRUCTURES OF TWO JRNL TITL 2 DISTINCT BACTERIAL XYLOGLUCANASES FROM FAMILIES GH5 AND JRNL TITL 3 GH12. JRNL REF J.BIOL.CHEM. V. 282 19177 2007 JRNL REFN ISSN 0021-9258 JRNL PMID 17376777 JRNL DOI 10.1074/JBC.M700224200 REMARK 2 REMARK 2 RESOLUTION. 1.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.3.0011 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 74.54 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 52009 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.116 REMARK 3 R VALUE (WORKING SET) : 0.115 REMARK 3 FREE R VALUE : 0.141 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 2779 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.43 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3694 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 97.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.1340 REMARK 3 BIN FREE R VALUE SET COUNT : 192 REMARK 3 BIN FREE R VALUE : 0.1720 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1846 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 132 REMARK 3 SOLVENT ATOMS : 361 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 12.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.24000 REMARK 3 B22 (A**2) : 0.24000 REMARK 3 B33 (A**2) : -0.36000 REMARK 3 B12 (A**2) : 0.12000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.047 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.044 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.023 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.273 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.980 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.977 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2213 ; 0.014 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): 1422 ; 0.003 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3072 ; 1.731 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3476 ; 1.048 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 276 ;15.870 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 95 ;37.873 ;24.842 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 313 ;12.010 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 4 ; 7.916 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 356 ; 0.177 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2383 ; 0.009 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 446 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 327 ; 0.187 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 1462 ; 0.191 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1074 ; 0.189 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 1110 ; 0.091 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 225 ; 0.139 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 19 ; 0.142 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 52 ; 0.192 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 31 ; 0.126 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1292 ; 1.574 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 507 ; 0.726 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2037 ; 2.112 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1145 ; 3.093 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1015 ; 4.058 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 4434 ; 1.506 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 361 ; 7.997 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3543 ; 3.589 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2JEN COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 18-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1290030243. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-03 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : DIAMOND (111), GE(220) REMARK 200 OPTICS : SAGITALLY FOCUSING GE(220) AND A REMARK 200 MULTILAYER REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54792 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.400 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.500 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 27.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.43 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.47000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 2JEM REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.70 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.6M AMMONIUM SULPHATE, 10% DIOXANE, REMARK 280 0.1M MES, PH 6.5, PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 57.31450 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 33.09054 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 36.76733 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 57.31450 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 33.09054 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 36.76733 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 57.31450 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 33.09054 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 36.76733 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 57.31450 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 33.09054 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 36.76733 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 57.31450 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 33.09054 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 36.76733 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 57.31450 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 33.09054 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 36.76733 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 66.18108 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 73.53467 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 66.18108 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 73.53467 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 66.18108 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 73.53467 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 66.18108 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 73.53467 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 66.18108 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 73.53467 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 66.18108 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 73.53467 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: HEXAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: HEXAMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -114.62900 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -57.31450 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 -99.27163 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 4 -0.500000 0.866025 0.000000 -57.31450 REMARK 350 BIOMT2 4 0.866025 0.500000 0.000000 33.09054 REMARK 350 BIOMT3 4 0.000000 0.000000 -1.000000 36.76733 REMARK 350 BIOMT1 5 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 5 0.000000 -1.000000 0.000000 -66.18108 REMARK 350 BIOMT3 5 0.000000 0.000000 -1.000000 36.76733 REMARK 350 BIOMT1 6 -0.500000 -0.866025 0.000000 -114.62900 REMARK 350 BIOMT2 6 -0.866025 0.500000 0.000000 -66.18108 REMARK 350 BIOMT3 6 0.000000 0.000000 -1.000000 36.76733 REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 155 TO ALA REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 LYS A 2 REMARK 465 ASN A 3 REMARK 465 ASN A 4 REMARK 465 HIS A 5 REMARK 465 LEU A 6 REMARK 465 LEU A 7 REMARK 465 LYS A 8 REMARK 465 SER A 9 REMARK 465 ILE A 10 REMARK 465 LEU A 11 REMARK 465 LEU A 12 REMARK 465 TRP A 13 REMARK 465 GLY A 14 REMARK 465 ALA A 15 REMARK 465 VAL A 16 REMARK 465 CYS A 17 REMARK 465 ILE A 18 REMARK 465 ILE A 19 REMARK 465 VAL A 20 REMARK 465 LEU A 21 REMARK 465 ALA A 22 REMARK 465 GLY A 23 REMARK 465 PRO A 24 REMARK 465 LEU A 25 REMARK 465 SER A 26 REMARK 465 ALA A 27 REMARK 465 PHE A 28 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 121 CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 81 146.87 -170.12 REMARK 500 HIS A 97 82.13 -156.48 REMARK 500 VAL A 172 -64.65 -100.50 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2037 DISTANCE = 5.91 ANGSTROMS REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JEM RELATED DB: PDB REMARK 900 NATIVE FAMILY 12 XYLOGLUCANASE FROM BACILLUS LICHENIFORMIS DBREF 2JEN A 1 261 UNP Q7X4S4 Q7X4S4_BACLI 1 261 SEQADV 2JEN ALA A 155 UNP Q7X4S4 GLU 155 ENGINEERED MUTATION SEQRES 1 A 261 MET LYS ASN ASN HIS LEU LEU LYS SER ILE LEU LEU TRP SEQRES 2 A 261 GLY ALA VAL CYS ILE ILE VAL LEU ALA GLY PRO LEU SER SEQRES 3 A 261 ALA PHE ALA ALA SER SER SER ASN PRO SER ASP LYS LEU SEQRES 4 A 261 TYR PHE LYS ASN LYS LYS TYR TYR ILE PHE ASN ASN VAL SEQRES 5 A 261 TRP GLY ALA ASP GLN VAL SER GLY TRP TRP GLN THR ILE SEQRES 6 A 261 TYR HIS ASN SER ASP SER ASP MET GLY TRP VAL TRP ASN SEQRES 7 A 261 TRP PRO SER ASN THR SER THR VAL LYS ALA TYR PRO SER SEQRES 8 A 261 ILE VAL SER GLY TRP HIS TRP THR GLU GLY TYR THR ALA SEQRES 9 A 261 GLY SER GLY PHE PRO THR ARG LEU SER ASP GLN LYS ASN SEQRES 10 A 261 ILE ASN THR LYS VAL SER TYR SER ILE SER ALA ASN GLY SEQRES 11 A 261 THR TYR ASN ALA ALA TYR ASP ILE TRP LEU HIS ASN THR SEQRES 12 A 261 ASN LYS ALA SER TRP ASP SER ALA PRO THR ASP ALA ILE SEQRES 13 A 261 MET ILE TRP LEU ASN ASN THR ASN ALA GLY PRO ALA GLY SEQRES 14 A 261 SER TYR VAL GLU THR VAL SER ILE GLY GLY HIS SER TRP SEQRES 15 A 261 LYS VAL TYR LYS GLY TYR ILE ASP ALA GLY GLY GLY LYS SEQRES 16 A 261 GLY TRP ASN VAL PHE SER PHE ILE ARG THR ALA ASN THR SEQRES 17 A 261 GLN SER ALA ASN LEU ASN ILE ARG ASP PHE THR ASN TYR SEQRES 18 A 261 LEU ALA ASP SER LYS GLN TRP LEU SER LYS THR LYS TYR SEQRES 19 A 261 VAL SER SER VAL GLU PHE GLY THR GLU VAL PHE GLY GLY SEQRES 20 A 261 THR GLY GLN ILE ASN ILE SER ASN TRP ASP VAL THR VAL SEQRES 21 A 261 ARG HET GLC B 1 24 HET GLC B 2 11 HET BGC B 3 11 HET BGC B 4 11 HET XYS B 5 9 HET XYS B 6 9 HET GLC C 1 12 HET GLC C 2 11 HET XYS C 3 9 HET XYS C 4 9 HET DIO A1262 12 HET DIO A1263 6 HET GOL A1264 6 HET SO4 A1265 5 HET SO4 A1266 5 HETNAM GLC ALPHA-D-GLUCOPYRANOSE HETNAM BGC BETA-D-GLUCOPYRANOSE HETNAM XYS ALPHA-D-XYLOPYRANOSE HETNAM DIO 1,4-DIETHYLENE DIOXIDE HETNAM GOL GLYCEROL HETNAM SO4 SULFATE ION HETSYN GLC ALPHA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN BGC BETA-D-GLUCOSE; D-GLUCOSE; GLUCOSE HETSYN XYS ALPHA-D-XYLOSE; D-XYLOSE; XYLOSE; XYLOPYRANOSE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GLC 4(C6 H12 O6) FORMUL 2 BGC 2(C6 H12 O6) FORMUL 2 XYS 4(C5 H10 O5) FORMUL 4 DIO 2(C4 H8 O2) FORMUL 6 GOL C3 H8 O3 FORMUL 7 SO4 2(O4 S 2-) FORMUL 9 HOH *361(H2 O) HELIX 1 1 SER A 113 GLN A 115 5 3 HELIX 2 2 ILE A 215 SER A 225 1 11 SHEET 1 AA 6 ALA A 30 SER A 32 0 SHEET 2 AA 6 TRP A 62 SER A 69 -1 O ILE A 65 N SER A 32 SHEET 3 AA 6 ASP A 72 TRP A 79 -1 O ASP A 72 N ASN A 68 SHEET 4 AA 6 VAL A 244 ARG A 261 -1 O GLY A 247 N TRP A 79 SHEET 5 AA 6 ASN A 117 ALA A 128 -1 O ASN A 117 N ARG A 261 SHEET 6 AA 6 SER A 210 ASN A 214 -1 O ALA A 211 N VAL A 122 SHEET 1 AB 5 ALA A 30 SER A 32 0 SHEET 2 AB 5 TRP A 62 SER A 69 -1 O ILE A 65 N SER A 32 SHEET 3 AB 5 ASP A 72 TRP A 79 -1 O ASP A 72 N ASN A 68 SHEET 4 AB 5 VAL A 244 ARG A 261 -1 O GLY A 247 N TRP A 79 SHEET 5 AB 5 THR A 131 HIS A 141 -1 O THR A 131 N PHE A 245 LINK O4 AGLC B 1 C1 GLC B 2 1555 1555 1.44 LINK O4 BGLC B 1 C1 GLC B 2 1555 1555 1.42 LINK O4 GLC B 2 C1 BGC B 3 1555 1555 1.43 LINK O6 GLC B 2 C1 XYS B 6 1555 1555 1.46 LINK O4 BGC B 3 C1 BGC B 4 1555 1555 1.43 LINK O6 BGC B 3 C1 XYS B 5 1555 1555 1.46 LINK O4 GLC C 1 C1 GLC C 2 1555 1555 1.44 LINK O6 GLC C 1 C1 XYS C 4 1555 1555 1.42 LINK O6 GLC C 2 C1 XYS C 3 1555 1555 1.45 CISPEP 1 PHE A 108 PRO A 109 0 2.38 CRYST1 114.629 114.629 110.302 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008724 0.005037 0.000000 0.00000 SCALE2 0.000000 0.010073 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009066 0.00000