HEADER TRANSCRIPTION 23-JAN-07 2JEU TITLE TRANSCRIPTION ACTIVATOR STRUCTURE REVEALS REDOX CONTROL OF A TITLE 2 REPLICATION INITIATION REACTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGULATORY PROTEIN E2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL TRANS-ACTIVATION DOMAIN (TAD), RESIDUES 1-209; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOVINE PAPILLOMAVIRUS TYPE 1; SOURCE 3 ORGANISM_TAXID: 10559; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET11C KEYWDS NUCLEAR PROTEIN, DNA REPLICATION, PHOSPHORYLATION, TRANSCRIPTION KEYWDS 2 REGULATION, VIRAL TRANSCRIPTION FACTOR, BOVINE PAPILLOMAVIRUS, KEYWDS 3 REPLICATION INITIATION, EARLY PROTEIN, TRANSCRIPTION, REDOX CONTROL, KEYWDS 4 E1, E2, OXIDATION, ACTIVATOR, REPRESSOR, DNA-BINDING EXPDTA X-RAY DIFFRACTION AUTHOR C.M.SANDERS,D.SIZOV,P.R.SEAVERS,M.ORTIZ-LOMBARDIA,A.A.ANTSON REVDAT 6 13-DEC-23 2JEU 1 REMARK REVDAT 5 08-MAY-19 2JEU 1 REMARK REVDAT 4 13-JUL-11 2JEU 1 VERSN REVDAT 3 24-FEB-09 2JEU 1 VERSN REVDAT 2 19-JUN-07 2JEU 1 JRNL REVDAT 1 15-MAY-07 2JEU 0 JRNL AUTH C.M.SANDERS,D.SIZOV,P.R.SEAVERS,M.ORTIZ-LOMBARDIA,A.A.ANTSON JRNL TITL TRANSCRIPTION ACTIVATOR STRUCTURE REVEALS REDOX CONTROL OF A JRNL TITL 2 REPLICATION INITIATION REACTION. JRNL REF NUCLEIC ACIDS RES. V. 35 3504 2007 JRNL REFN ISSN 0305-1048 JRNL PMID 17478495 JRNL DOI 10.1093/NAR/GKM166 REMARK 2 REMARK 2 RESOLUTION. 2.80 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.80 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 24.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 6594 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.236 REMARK 3 R VALUE (WORKING SET) : 0.233 REMARK 3 FREE R VALUE : 0.281 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.000 REMARK 3 FREE R VALUE TEST SET COUNT : 500 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.80 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.87 REMARK 3 REFLECTION IN BIN (WORKING SET) : 412 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2700 REMARK 3 BIN FREE R VALUE SET COUNT : 33 REMARK 3 BIN FREE R VALUE : 0.3420 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1578 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 17 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 78.02 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -3.01000 REMARK 3 B22 (A**2) : -3.01000 REMARK 3 B33 (A**2) : 4.51000 REMARK 3 B12 (A**2) : -1.50000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 1.826 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.396 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.355 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 38.118 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.933 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1612 ; 0.007 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2179 ; 1.018 ; 1.929 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 196 ; 5.616 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 81 ;33.296 ;23.210 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 274 ;16.991 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ; 9.164 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 231 ; 0.070 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1237 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 650 ; 0.203 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 1081 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 55 ; 0.131 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 41 ; 0.246 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 6 ; 0.117 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 995 ; 0.441 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1556 ; 0.890 ; 3.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 717 ; 1.450 ; 4.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 623 ; 2.438 ; 8.000 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 3 A 95 REMARK 3 ORIGIN FOR THE GROUP (A): 5.5965 38.9550 126.8391 REMARK 3 T TENSOR REMARK 3 T11: -0.1607 T22: -0.0556 REMARK 3 T33: -0.2967 T12: -0.0590 REMARK 3 T13: 0.1170 T23: -0.0854 REMARK 3 L TENSOR REMARK 3 L11: 15.0385 L22: 3.3662 REMARK 3 L33: 7.2397 L12: -0.8497 REMARK 3 L13: 5.3175 L23: -0.0718 REMARK 3 S TENSOR REMARK 3 S11: -0.3866 S12: 1.0166 S13: 0.6518 REMARK 3 S21: -0.4413 S22: -0.0410 S23: -0.1944 REMARK 3 S31: -0.5194 S32: 0.1732 S33: 0.4276 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 96 A 199 REMARK 3 ORIGIN FOR THE GROUP (A): -22.0425 32.7291 134.4818 REMARK 3 T TENSOR REMARK 3 T11: -0.3159 T22: 0.1051 REMARK 3 T33: 0.0711 T12: -0.0033 REMARK 3 T13: -0.0283 T23: -0.3259 REMARK 3 L TENSOR REMARK 3 L11: 5.0343 L22: 4.1255 REMARK 3 L33: 6.0911 L12: 0.5482 REMARK 3 L13: -2.5243 L23: -1.6264 REMARK 3 S TENSOR REMARK 3 S11: -0.2438 S12: 0.4132 S13: -0.0132 REMARK 3 S21: -0.0101 S22: -0.2101 S23: 0.4078 REMARK 3 S31: -0.1821 S32: -0.1709 S33: 0.4539 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2JEU COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-JAN-07. REMARK 100 THE DEPOSITION ID IS D_1290031192. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-04 REMARK 200 TEMPERATURE (KELVIN) : 120.0 REMARK 200 PH : 8.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.934 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 7171 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.800 REMARK 200 RESOLUTION RANGE LOW (A) : 25.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 7.300 REMARK 200 R MERGE (I) : 0.06000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 32.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.90 REMARK 200 COMPLETENESS FOR SHELL (%) : 92.1 REMARK 200 DATA REDUNDANCY IN SHELL : 5.80 REMARK 200 R MERGE FOR SHELL (I) : 0.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1DTO REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.71 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLISED FROM 0.1 M REMARK 280 TRIS-HCL PH 8.5, 0.3 M NACL AND 18-22% TERTIARY BUTANOL, USING REMARK 280 THE HANGING DROP METHOD OF VAPOUR DIFFUSION., PH 8.50, VAPOR REMARK 280 DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 78.77233 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 157.54467 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 118.15850 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 196.93083 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 39.38617 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 78.77233 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 157.54467 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 196.93083 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 118.15850 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 39.38617 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLU A 2 REMARK 465 SER A 200 REMARK 465 THR A 201 REMARK 465 SER A 202 REMARK 465 SER A 203 REMARK 465 ASP A 204 REMARK 465 PHE A 205 REMARK 465 ARG A 206 REMARK 465 ASP A 207 REMARK 465 ARG A 208 REMARK 465 PRO A 209 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 104 -174.13 -61.27 REMARK 500 ASP A 122 -5.26 60.00 REMARK 500 ASN A 127 72.66 -102.33 REMARK 500 MET A 162 36.16 -90.27 REMARK 500 ALA A 165 83.85 -60.60 REMARK 500 ASP A 190 -84.23 -90.19 REMARK 500 GLN A 191 -75.23 -131.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1DBD RELATED DB: PDB REMARK 900 E2 DEOXYRIBONUCLEIC ACID-BINDING DOMAIN FROM PAPILLOMAVIRUS BPV-1 REMARK 900 RELATED ID: 1JJH RELATED DB: PDB REMARK 900 E2 DNA-BINDING DOMAIN FROM BOVINE PAPILLOMAVIRUS TYPE 1 REMARK 900 RELATED ID: 2BOP RELATED DB: PDB REMARK 900 BOVINE PAPILLOMAVIRUS-1 E2 (DEOXYRIBONUCLEIC ACID-BINDING DOMAIN) REMARK 900 (RESIDUES 325 - 410) COMPLEXED WITH DEOXYRIBONUCLEIC ACID DBREF 2JEU A 1 209 UNP P03122 VE2_BPV1 1 209 SEQRES 1 A 209 MET GLU THR ALA CYS GLU ARG LEU HIS VAL ALA GLN GLU SEQRES 2 A 209 THR GLN MET GLN LEU ILE GLU LYS SER SER ASP LYS LEU SEQRES 3 A 209 GLN ASP HIS ILE LEU TYR TRP THR ALA VAL ARG THR GLU SEQRES 4 A 209 ASN THR LEU LEU TYR ALA ALA ARG LYS LYS GLY VAL THR SEQRES 5 A 209 VAL LEU GLY HIS CYS ARG VAL PRO HIS SER VAL VAL CYS SEQRES 6 A 209 GLN GLU ARG ALA LYS GLN ALA ILE GLU MET GLN LEU SER SEQRES 7 A 209 LEU GLN GLU LEU SER LYS THR GLU PHE GLY ASP GLU PRO SEQRES 8 A 209 TRP SER LEU LEU ASP THR SER TRP ASP ARG TYR MET SER SEQRES 9 A 209 GLU PRO LYS ARG CYS PHE LYS LYS GLY ALA ARG VAL VAL SEQRES 10 A 209 GLU VAL GLU PHE ASP GLY ASN ALA SER ASN THR ASN TRP SEQRES 11 A 209 TYR THR VAL TYR SER ASN LEU TYR MET ARG THR GLU ASP SEQRES 12 A 209 GLY TRP GLN LEU ALA LYS ALA GLY ALA ASP GLY THR GLY SEQRES 13 A 209 LEU TYR TYR CYS THR MET ALA GLY ALA GLY ARG ILE TYR SEQRES 14 A 209 TYR SER ARG PHE GLY ASP GLU ALA ALA ARG PHE SER THR SEQRES 15 A 209 THR GLY HIS TYR SER VAL ARG ASP GLN ASP ARG VAL TYR SEQRES 16 A 209 ALA GLY VAL SER SER THR SER SER ASP PHE ARG ASP ARG SEQRES 17 A 209 PRO FORMUL 2 HOH *17(H2 O) HELIX 1 1 THR A 3 SER A 22 1 20 HELIX 2 2 LYS A 25 LYS A 48 1 24 HELIX 3 3 HIS A 61 LYS A 84 1 24 HELIX 4 4 THR A 85 GLU A 90 5 6 HELIX 5 5 SER A 98 SER A 104 1 7 HELIX 6 6 PHE A 173 SER A 181 1 9 SHEET 1 AA 2 VAL A 53 LEU A 54 0 SHEET 2 AA 2 CYS A 57 ARG A 58 -1 O CYS A 57 N LEU A 54 SHEET 1 AB 7 ILE A 168 ARG A 172 0 SHEET 2 AB 7 GLY A 156 CYS A 160 -1 O LEU A 157 N TYR A 170 SHEET 3 AB 7 GLY A 144 ALA A 152 -1 O LYS A 149 N CYS A 160 SHEET 4 AB 7 ASN A 124 THR A 141 -1 O SER A 135 N ALA A 150 SHEET 5 AB 7 PHE A 110 PHE A 121 -1 O PHE A 110 N TYR A 138 SHEET 6 AB 7 HIS A 185 ARG A 189 -1 O SER A 187 N GLU A 120 SHEET 7 AB 7 VAL A 194 VAL A 198 -1 O TYR A 195 N VAL A 188 CISPEP 1 GLU A 105 PRO A 106 0 -4.29 CRYST1 61.539 61.539 236.317 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.016250 0.009382 0.000000 0.00000 SCALE2 0.000000 0.018764 0.000000 0.00000 SCALE3 0.000000 0.000000 0.004232 0.00000