data_2JF5 # _entry.id 2JF5 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2JF5 PDBE EBI-31241 WWPDB D_1290031241 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.content_type _pdbx_database_related.details PDB 1C3T unspecified 'ROTAMER STRAIN AS A DETERMINANT OF PROTEIN STRUCTURALSPECIFICITY' PDB 1D3Z unspecified 'UBIQUITIN NMR STRUCTURE' PDB 1F9J unspecified 'STRUCTURE OF A NEW CRYSTAL FORM OF TETRAUBIQUITIN' PDB 1FXT unspecified 'STRUCTURE OF A CONJUGATING ENZYME-UBIQUITIN THIOLESTERCOMPLEX' PDB 1G6J unspecified 'STRUCTURE OF RECOMBINANT HUMAN UBIQUITIN IN AOT REVERSEMICELLES' PDB 1GJZ unspecified 'SOLUTION STRUCTURE OF A DIMERIC N-TERMINAL FRAGMENT OF HUMAN UBIQUITIN' PDB 1NBF unspecified 'CRYSTAL STRUCTURE OF A UBP-FAMILY DEUBIQUITINATING ENZYMEIN ISOLATION AND IN COMPLEX WITH UBIQUITIN ALDEHYDE' PDB 1OGW unspecified 'SYNTHETIC UBIQUITIN WITH FLUORO-LEU AT 50 AND 67' PDB 1Q5W unspecified 'UBIQUITIN RECOGNITION BY NPL4 ZINC-FINGERS' PDB 1S1Q unspecified 'TSG101(UEV) DOMAIN IN COMPLEX WITH UBIQUITIN' PDB 1SIF unspecified 'CRYSTAL STRUCTURE OF A MULTIPLE HYDROPHOBIC CORE MUTANT OFUBIQUITIN' PDB 1TBE unspecified TETRAUBIQUITIN PDB 1UBI unspecified UBIQUITIN PDB 1UBQ unspecified UBIQUITIN PDB 1XD3 unspecified 'CRYSTAL STRUCTURE OF UCHL3-UBVME COMPLEX' PDB 1XQQ unspecified 'SIMULTANEOUS DETERMINATION OF PROTEIN STRUCTURE AND DYNAMICS' PDB 1YX5 unspecified 'SOLUTION STRUCTURE OF S5A UIM-1/UBIQUITIN COMPLEX' PDB 1YX6 unspecified 'SOLUTION STRUCTURE OF S5A UIM-2/UBIQUITIN COMPLEX' PDB 1ZGU unspecified 'SOLUTION STRUCTURE OF THE HUMAN MMS2- UBIQUITIN COMPLEX' PDB 2AYO unspecified 'STRUCTURE OF USP14 BOUND TO UBQUITIN ALDEHYDE' PDB 2BGF unspecified 'NMR STRUCTURE OF LYS48-LINKED DI-UBIQUITIN USING CHEMICAL SHIFT PERTURBATION DATA TOGETHER WITH RDCS AND 15N-RELAXATION DATA' PDB 2FCM unspecified 'X-RAY CRYSTAL STRUCTURE OF A CHEMICALLY SYNTHESIZED [D-GLN35]UBIQUITIN WITH A CUBIC SPACE GROUP' PDB 2FCN unspecified 'X-RAY CRYSTAL STRUCTURE OF A CHEMICALLY SYNTHESIZED [D-VAL35]UBIQUITIN WITH A CUBIC SPACE GROUP' PDB 2FCQ unspecified 'X-RAY CRYSTAL STRUCTURE OF A CHEMICALLY SYNTHESIZEDUBIQUITIN WITH A CUBIC SPACE GROUP' PDB 2FCS unspecified 'X-RAY CRYSTAL STRUCTURE OF A CHEMICALLY SYNTHESIZED [L-GLN35]UBIQUITIN WITH A CUBIC SPACE GROUP' PDB 2FUH unspecified 'SOLUTION STRUCTURE OF THE UBCH5C/UB NON- COVALENT COMPLEX' PDB 2G45 unspecified 'CO-CRYSTAL STRUCTURE OF ZNF UBP DOMAIN FROM THEDEUBIQUITINATING ENZYME ISOPEPTIDASE T (ISOT) IN COMPLEXWITH UBIQUITIN' PDB 2GBK unspecified 'CRYSTAL STRUCTURE OF THE 9-10 MOAD INSERTION MUTANT OFUBIQUITIN' PDB 2GBM unspecified 'CRYSTAL STRUCTURE OF THE 35-36 8 GLYCINE INSERTION MUTANTOF UBIQUITIN' PDB 2GBN unspecified 'CRYSTAL STRUCTURE OF THE 35-36 8 GLYCINE INSERTION MUTANTOF UBIQUITIN' PDB 2J7Q unspecified ;CRYSTAL STRUCTURE OF THE UBIQUITIN-SPECIFIC PROTEASE ENCODED BY MURINE CYTOMEGALOVIRUS TEGUMENT PROTEIN M48 IN COMPLEX WITH A UBQUITIN-BASED SUICIDE SUBSTRATE ; # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2JF5 _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-01-26 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Komander, D.' 1 'Odenwaelder, P.' 2 'Barford, D.' 3 # _citation.id primary _citation.title 'Molecular Discrimination of Structurally Equivalent Lys 63-Linked and Linear Polyubiquitin Chains.' _citation.journal_abbrev 'Embo Rep.' _citation.journal_volume 10 _citation.page_first 466 _citation.page_last ? _citation.year 2009 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1469-221X _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19373254 _citation.pdbx_database_id_DOI 10.1038/EMBOR.2009.55 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Komander, D.' 1 primary 'Reyes-Turcu, F.' 2 primary 'Licchesi, J.D.F.' 3 primary 'Odenwaelder, P.' 4 primary 'Wilkinson, K.D.' 5 primary 'Barford, D.' 6 # _cell.entry_id 2JF5 _cell.length_a 105.021 _cell.length_b 105.021 _cell.length_c 105.021 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 48 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2JF5 _symmetry.space_group_name_H-M 'P 43 3 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 212 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man UBIQUITIN 8576.831 2 ? ? ? 'ISO-PEPTIDE LINK BETWEEN A-LYS63 AND B-GLY76' 2 non-polymer syn 'CADMIUM ION' 112.411 2 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 non-polymer syn 'COBALT (II) ION' 58.933 2 ? ? ? ? 5 non-polymer syn 'CHLORIDE ION' 35.453 1 ? ? ? ? 6 water nat water 18.015 78 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'DI-UBIQUITIN, LYS63-LINKED' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG _entity_poly.pdbx_seq_one_letter_code_can MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRGG _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 GLN n 1 3 ILE n 1 4 PHE n 1 5 VAL n 1 6 LYS n 1 7 THR n 1 8 LEU n 1 9 THR n 1 10 GLY n 1 11 LYS n 1 12 THR n 1 13 ILE n 1 14 THR n 1 15 LEU n 1 16 GLU n 1 17 VAL n 1 18 GLU n 1 19 PRO n 1 20 SER n 1 21 ASP n 1 22 THR n 1 23 ILE n 1 24 GLU n 1 25 ASN n 1 26 VAL n 1 27 LYS n 1 28 ALA n 1 29 LYS n 1 30 ILE n 1 31 GLN n 1 32 ASP n 1 33 LYS n 1 34 GLU n 1 35 GLY n 1 36 ILE n 1 37 PRO n 1 38 PRO n 1 39 ASP n 1 40 GLN n 1 41 GLN n 1 42 ARG n 1 43 LEU n 1 44 ILE n 1 45 PHE n 1 46 ALA n 1 47 GLY n 1 48 LYS n 1 49 GLN n 1 50 LEU n 1 51 GLU n 1 52 ASP n 1 53 GLY n 1 54 ARG n 1 55 THR n 1 56 LEU n 1 57 SER n 1 58 ASP n 1 59 TYR n 1 60 ASN n 1 61 ILE n 1 62 GLN n 1 63 LYS n 1 64 GLU n 1 65 SER n 1 66 THR n 1 67 LEU n 1 68 HIS n 1 69 LEU n 1 70 VAL n 1 71 LEU n 1 72 ARG n 1 73 LEU n 1 74 ARG n 1 75 GLY n 1 76 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'ROSETTA2 PLYSS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET17B _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code UBIQ_HUMAN _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_db_accession P62988 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2JF5 A 1 ? 76 ? P62988 1 ? 76 ? 1 76 2 1 2JF5 B 1 ? 76 ? P62988 1 ? 76 ? 1 76 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 CO non-polymer . 'COBALT (II) ION' ? 'Co 2' 58.933 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2JF5 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.83 _exptl_crystal.density_percent_sol 56 _exptl_crystal.description NONE # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;12 % (W/V) PEG 3350, 5 MM NICKEL CHLORIDE, 5 MM COBALT CHLORIDE, 5 MM CADMIUM CHLORIDE, 5 MM MAGNESIUM CHLORIDE, 0.1 M HEPES [PH 7.5] ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2006-10-09 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.8726 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID23-2' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID23-2 _diffrn_source.pdbx_wavelength 0.8726 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2JF5 _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50.00 _reflns.d_resolution_high 1.95 _reflns.number_obs 15023 _reflns.number_all ? _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.11 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 11.40 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.8 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.95 _reflns_shell.d_res_low 2.06 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.59 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.20 _reflns_shell.pdbx_redundancy 5.3 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2JF5 _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 14211 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.00 _refine.ls_d_res_high 1.95 _refine.ls_percent_reflns_obs 99.8 _refine.ls_R_factor_obs 0.208 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.206 _refine.ls_R_factor_R_free 0.250 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.100 _refine.ls_number_reflns_R_free 756 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.944 _refine.correlation_coeff_Fo_to_Fc_free 0.919 _refine.B_iso_mean 42.28 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.DISORDERED RESIDUES HAVE BEEN REFINED WITH OCCU 0.01. GLY76 IN MOLA IS NOT MODELLED AN ISOPEPTIDE LINKAGE BETWEEN LYS63 (MOLA) AND GLY76 CONNECTS THE TWO UBIQUITIN MOIETIES ; _refine.pdbx_starting_model 'PDB ENTRY 1UBQ' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.157 _refine.pdbx_overall_ESU_R_Free 0.151 _refine.overall_SU_ML 0.119 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 7.283 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1198 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 78 _refine_hist.number_atoms_total 1282 _refine_hist.d_res_high 1.95 _refine_hist.d_res_low 50.00 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.016 0.022 ? 1240 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.513 1.998 ? 1671 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 6.116 5.000 ? 157 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.390 25.439 ? 57 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 17.114 15.000 ? 258 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 19.802 15.000 ? 9 'X-RAY DIFFRACTION' ? r_chiral_restr 0.105 0.200 ? 198 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 897 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined 0.216 0.200 ? 471 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.309 0.200 ? 807 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.232 0.200 ? 76 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.207 0.200 ? 69 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.191 0.200 ? 15 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.887 1.500 ? 789 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.432 2.000 ? 1243 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 2.226 3.000 ? 492 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 3.713 4.500 ? 424 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.95 _refine_ls_shell.d_res_low 2.00 _refine_ls_shell.number_reflns_R_work 1014 _refine_ls_shell.R_factor_R_work 0.2770 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3320 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 45 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2JF5 _struct.title 'crystal structure of Lys63-linked di-ubiquitin' _struct.pdbx_descriptor UBIQUITIN _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2JF5 _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text 'LYS6, LYS63, NF-KB, UBIQUITIN, NUCLEAR PROTEIN, SIGNAL TRANSDUCTION, SIGNALING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? E N N 2 ? F N N 4 ? G N N 5 ? H N N 4 ? I N N 6 ? J N N 6 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 22 ? GLY A 35 ? THR A 22 GLY A 35 1 ? 14 HELX_P HELX_P2 2 PRO A 37 ? ASP A 39 ? PRO A 37 ASP A 39 5 ? 3 HELX_P HELX_P3 3 LEU A 56 ? ASN A 60 ? LEU A 56 ASN A 60 5 ? 5 HELX_P HELX_P4 4 THR B 22 ? GLY B 35 ? THR B 22 GLY B 35 1 ? 14 HELX_P HELX_P5 5 PRO B 37 ? ASP B 39 ? PRO B 37 ASP B 39 5 ? 3 HELX_P HELX_P6 6 LEU B 56 ? ASN B 60 ? LEU B 56 ASN B 60 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? C CD . CD A ? ? 1_555 A ASP 21 OD1 ? ? A CD 1076 A ASP 21 1_555 ? ? ? ? ? ? ? 2.165 ? metalc2 metalc ? ? C CD . CD A ? ? 1_555 A GLU 18 OE2 ? ? A CD 1076 A GLU 18 1_555 ? ? ? ? ? ? ? 2.101 ? metalc3 metalc ? ? C CD . CD A ? ? 1_555 A GLU 18 OE2 ? ? A CD 1076 A GLU 18 12_664 ? ? ? ? ? ? ? 2.597 ? metalc4 metalc ? ? C CD . CD B ? ? 1_555 A GLU 18 OE1 ? ? A CD 1076 A GLU 18 12_664 ? ? ? ? ? ? ? 2.400 ? metalc5 metalc ? ? C CD . CD B ? ? 1_555 A ASP 21 OD1 ? ? A CD 1076 A ASP 21 1_555 ? ? ? ? ? ? ? 2.174 ? metalc6 metalc ? ? C CD . CD B ? ? 1_555 A ASP 21 OD2 ? ? A CD 1076 A ASP 21 1_555 ? ? ? ? ? ? ? 2.640 ? metalc7 metalc ? ? D MG . MG ? ? ? 1_555 A GLU 16 OE2 ? ? A MG 1078 A GLU 16 1_555 ? ? ? ? ? ? ? 2.069 ? metalc8 metalc ? ? D MG . MG ? ? ? 1_555 I HOH . O ? ? A MG 1078 A HOH 2005 1_555 ? ? ? ? ? ? ? 1.881 ? metalc9 metalc ? ? D MG . MG ? ? ? 1_555 A MET 1 N ? ? A MG 1078 A MET 1 1_555 ? ? ? ? ? ? ? 1.706 ? metalc10 metalc ? ? E CD . CD A ? ? 1_555 B ASP 21 OD1 ? ? B CD 1077 B ASP 21 1_555 ? ? ? ? ? ? ? 2.337 ? metalc11 metalc ? ? E CD . CD A ? ? 1_555 B ASP 21 OD2 ? ? B CD 1077 B ASP 21 1_555 ? ? ? ? ? ? ? 2.574 ? metalc12 metalc ? ? E CD . CD A ? ? 1_555 G CL . CL ? ? B CD 1077 B CL 1080 1_555 ? ? ? ? ? ? ? 2.709 ? metalc13 metalc ? ? E CD . CD B ? ? 1_555 B GLU 18 OE1 ? ? B CD 1077 B GLU 18 1_555 ? ? ? ? ? ? ? 2.344 ? metalc14 metalc ? ? E CD . CD B ? ? 1_555 B GLU 18 OE1 ? ? B CD 1077 B GLU 18 10_756 ? ? ? ? ? ? ? 2.502 ? metalc15 metalc ? ? E CD . CD B ? ? 1_555 B ASP 21 OD1 ? ? B CD 1077 B ASP 21 1_555 ? ? ? ? ? ? ? 2.391 ? metalc16 metalc ? ? E CD . CD A ? ? 1_555 B LYS 29 NZ ? ? B CD 1077 B LYS 29 1_555 ? ? ? ? ? ? ? 2.877 ? metalc17 metalc ? ? E CD . CD A ? ? 1_555 B GLU 18 OE2 ? ? B CD 1077 B GLU 18 10_756 ? ? ? ? ? ? ? 2.234 ? metalc18 metalc ? ? E CD . CD A ? ? 1_555 B GLU 18 OE1 ? ? B CD 1077 B GLU 18 10_756 ? ? ? ? ? ? ? 2.847 ? metalc19 metalc ? ? F CO . CO ? ? ? 1_555 J HOH . O ? ? B CO 1079 B HOH 2047 1_555 ? ? ? ? ? ? ? 2.326 ? metalc20 metalc ? ? F CO . CO ? ? ? 1_555 B ASP 32 OD2 ? ? B CO 1079 B ASP 32 7_674 ? ? ? ? ? ? ? 2.263 ? metalc21 metalc ? ? F CO . CO ? ? ? 1_555 B GLU 16 OE2 ? ? B CO 1079 B GLU 16 1_555 ? ? ? ? ? ? ? 2.364 ? metalc22 metalc ? ? F CO . CO ? ? ? 1_555 B MET 1 N ? ? B CO 1079 B MET 1 1_555 ? ? ? ? ? ? ? 1.864 ? metalc23 metalc ? ? H CO . CO ? ? ? 1_555 J HOH . O ? ? B CO 1081 B HOH 2039 1_555 ? ? ? ? ? ? ? 1.980 ? metalc24 metalc ? ? H CO . CO ? ? ? 1_555 B HIS 68 NE2 ? ? B CO 1081 B HIS 68 24_676 ? ? ? ? ? ? ? 2.274 ? metalc25 metalc ? ? H CO . CO ? ? ? 1_555 B GLU 64 OE1 ? ? B CO 1081 B GLU 64 1_555 ? ? ? ? ? ? ? 2.416 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? BA ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? parallel BA 3 4 ? anti-parallel BA 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 THR A 12 ? GLU A 16 ? THR A 12 GLU A 16 AA 2 GLN A 2 ? LYS A 6 ? GLN A 2 LYS A 6 AA 3 THR A 66 ? LEU A 71 ? THR A 66 LEU A 71 AA 4 GLN A 41 ? PHE A 45 ? GLN A 41 PHE A 45 AA 5 LYS A 48 ? GLN A 49 ? LYS A 48 GLN A 49 BA 1 THR B 12 ? GLU B 16 ? THR B 12 GLU B 16 BA 2 GLN B 2 ? LYS B 6 ? GLN B 2 LYS B 6 BA 3 THR B 66 ? LEU B 71 ? THR B 66 LEU B 71 BA 4 GLN B 41 ? PHE B 45 ? GLN B 41 PHE B 45 BA 5 LYS B 48 ? GLN B 49 ? LYS B 48 GLN B 49 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 15 ? N LEU A 15 O ILE A 3 ? O ILE A 3 AA 2 3 N LYS A 6 ? N LYS A 6 O LEU A 67 ? O LEU A 67 AA 3 4 N VAL A 70 ? N VAL A 70 O ARG A 42 ? O ARG A 42 AA 4 5 N PHE A 45 ? N PHE A 45 O LYS A 48 ? O LYS A 48 BA 1 2 N LEU B 15 ? N LEU B 15 O ILE B 3 ? O ILE B 3 BA 2 3 N LYS B 6 ? N LYS B 6 O LEU B 67 ? O LEU B 67 BA 3 4 N VAL B 70 ? N VAL B 70 O ARG B 42 ? O ARG B 42 BA 4 5 N PHE B 45 ? N PHE B 45 O LYS B 48 ? O LYS B 48 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CD B 1077' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CD A 1076' AC3 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CO B 1079' AC4 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE CL B 1080' AC5 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE MG A 1078' AC6 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE CO B 1081' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 GLU B 18 ? GLU B 18 . ? 10_756 ? 2 AC1 5 GLU B 18 ? GLU B 18 . ? 1_555 ? 3 AC1 5 ASP B 21 ? ASP B 21 . ? 1_555 ? 4 AC1 5 LYS B 29 ? LYS B 29 . ? 1_555 ? 5 AC1 5 CL G . ? CL B 1080 . ? 1_555 ? 6 AC2 4 GLU A 18 ? GLU A 18 . ? 12_664 ? 7 AC2 4 GLU A 18 ? GLU A 18 . ? 1_555 ? 8 AC2 4 ASP A 21 ? ASP A 21 . ? 1_555 ? 9 AC2 4 LYS A 29 ? LYS A 29 . ? 1_555 ? 10 AC3 4 MET B 1 ? MET B 1 . ? 1_555 ? 11 AC3 4 GLU B 16 ? GLU B 16 . ? 1_555 ? 12 AC3 4 ASP B 32 ? ASP B 32 . ? 7_674 ? 13 AC3 4 HOH J . ? HOH B 2047 . ? 1_555 ? 14 AC4 3 GLU B 18 ? GLU B 18 . ? 1_555 ? 15 AC4 3 LYS B 29 ? LYS B 29 . ? 1_555 ? 16 AC4 3 CD E . ? CD B 1077 . ? 1_555 ? 17 AC5 4 MET A 1 ? MET A 1 . ? 1_555 ? 18 AC5 4 GLU A 16 ? GLU A 16 . ? 1_555 ? 19 AC5 4 ASP A 32 ? ASP A 32 . ? 6_566 ? 20 AC5 4 HOH I . ? HOH A 2005 . ? 1_555 ? 21 AC6 4 GLU B 64 ? GLU B 64 . ? 1_555 ? 22 AC6 4 HIS B 68 ? HIS B 68 . ? 24_676 ? 23 AC6 4 HOH J . ? HOH B 2039 . ? 1_555 ? 24 AC6 4 HOH J . ? HOH B 2043 . ? 24_676 ? # _database_PDB_matrix.entry_id 2JF5 _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2JF5 _atom_sites.fract_transf_matrix[1][1] 0.009522 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009522 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009522 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CD CL CO MG N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 GLN 2 2 2 GLN GLN A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 LYS 6 6 6 LYS LYS A . n A 1 7 THR 7 7 7 THR THR A . n A 1 8 LEU 8 8 8 LEU LEU A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 GLY 10 10 10 GLY GLY A . n A 1 11 LYS 11 11 11 LYS LYS A . n A 1 12 THR 12 12 12 THR THR A . n A 1 13 ILE 13 13 13 ILE ILE A . n A 1 14 THR 14 14 14 THR THR A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 VAL 17 17 17 VAL VAL A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 PRO 19 19 19 PRO PRO A . n A 1 20 SER 20 20 20 SER SER A . n A 1 21 ASP 21 21 21 ASP ASP A . n A 1 22 THR 22 22 22 THR THR A . n A 1 23 ILE 23 23 23 ILE ILE A . n A 1 24 GLU 24 24 24 GLU GLU A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 VAL 26 26 26 VAL VAL A . n A 1 27 LYS 27 27 27 LYS LYS A . n A 1 28 ALA 28 28 28 ALA ALA A . n A 1 29 LYS 29 29 29 LYS LYS A . n A 1 30 ILE 30 30 30 ILE ILE A . n A 1 31 GLN 31 31 31 GLN GLN A . n A 1 32 ASP 32 32 32 ASP ASP A . n A 1 33 LYS 33 33 33 LYS LYS A . n A 1 34 GLU 34 34 34 GLU GLU A . n A 1 35 GLY 35 35 35 GLY GLY A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 PRO 37 37 37 PRO PRO A . n A 1 38 PRO 38 38 38 PRO PRO A . n A 1 39 ASP 39 39 39 ASP ASP A . n A 1 40 GLN 40 40 40 GLN GLN A . n A 1 41 GLN 41 41 41 GLN GLN A . n A 1 42 ARG 42 42 42 ARG ARG A . n A 1 43 LEU 43 43 43 LEU LEU A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 GLY 47 47 47 GLY GLY A . n A 1 48 LYS 48 48 48 LYS LYS A . n A 1 49 GLN 49 49 49 GLN GLN A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 GLU 51 51 51 GLU GLU A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 GLY 53 53 53 GLY GLY A . n A 1 54 ARG 54 54 54 ARG ARG A . n A 1 55 THR 55 55 55 THR THR A . n A 1 56 LEU 56 56 56 LEU LEU A . n A 1 57 SER 57 57 57 SER SER A . n A 1 58 ASP 58 58 58 ASP ASP A . n A 1 59 TYR 59 59 59 TYR TYR A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 ILE 61 61 61 ILE ILE A . n A 1 62 GLN 62 62 62 GLN GLN A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 SER 65 65 65 SER SER A . n A 1 66 THR 66 66 66 THR THR A . n A 1 67 LEU 67 67 67 LEU LEU A . n A 1 68 HIS 68 68 68 HIS HIS A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 LEU 71 71 71 LEU LEU A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 LEU 73 73 73 LEU LEU A . n A 1 74 ARG 74 74 74 ARG ARG A . n A 1 75 GLY 75 75 75 GLY GLY A . n A 1 76 GLY 76 76 ? ? ? A . n B 1 1 MET 1 1 1 MET MET B . n B 1 2 GLN 2 2 2 GLN GLN B . n B 1 3 ILE 3 3 3 ILE ILE B . n B 1 4 PHE 4 4 4 PHE PHE B . n B 1 5 VAL 5 5 5 VAL VAL B . n B 1 6 LYS 6 6 6 LYS LYS B . n B 1 7 THR 7 7 7 THR THR B . n B 1 8 LEU 8 8 8 LEU LEU B . n B 1 9 THR 9 9 9 THR THR B . n B 1 10 GLY 10 10 10 GLY GLY B . n B 1 11 LYS 11 11 11 LYS LYS B . n B 1 12 THR 12 12 12 THR THR B . n B 1 13 ILE 13 13 13 ILE ILE B . n B 1 14 THR 14 14 14 THR THR B . n B 1 15 LEU 15 15 15 LEU LEU B . n B 1 16 GLU 16 16 16 GLU GLU B . n B 1 17 VAL 17 17 17 VAL VAL B . n B 1 18 GLU 18 18 18 GLU GLU B . n B 1 19 PRO 19 19 19 PRO PRO B . n B 1 20 SER 20 20 20 SER SER B . n B 1 21 ASP 21 21 21 ASP ASP B . n B 1 22 THR 22 22 22 THR THR B . n B 1 23 ILE 23 23 23 ILE ILE B . n B 1 24 GLU 24 24 24 GLU GLU B . n B 1 25 ASN 25 25 25 ASN ASN B . n B 1 26 VAL 26 26 26 VAL VAL B . n B 1 27 LYS 27 27 27 LYS LYS B . n B 1 28 ALA 28 28 28 ALA ALA B . n B 1 29 LYS 29 29 29 LYS LYS B . n B 1 30 ILE 30 30 30 ILE ILE B . n B 1 31 GLN 31 31 31 GLN GLN B . n B 1 32 ASP 32 32 32 ASP ASP B . n B 1 33 LYS 33 33 33 LYS LYS B . n B 1 34 GLU 34 34 34 GLU GLU B . n B 1 35 GLY 35 35 35 GLY GLY B . n B 1 36 ILE 36 36 36 ILE ILE B . n B 1 37 PRO 37 37 37 PRO PRO B . n B 1 38 PRO 38 38 38 PRO PRO B . n B 1 39 ASP 39 39 39 ASP ASP B . n B 1 40 GLN 40 40 40 GLN GLN B . n B 1 41 GLN 41 41 41 GLN GLN B . n B 1 42 ARG 42 42 42 ARG ARG B . n B 1 43 LEU 43 43 43 LEU LEU B . n B 1 44 ILE 44 44 44 ILE ILE B . n B 1 45 PHE 45 45 45 PHE PHE B . n B 1 46 ALA 46 46 46 ALA ALA B . n B 1 47 GLY 47 47 47 GLY GLY B . n B 1 48 LYS 48 48 48 LYS LYS B . n B 1 49 GLN 49 49 49 GLN GLN B . n B 1 50 LEU 50 50 50 LEU LEU B . n B 1 51 GLU 51 51 51 GLU GLU B . n B 1 52 ASP 52 52 52 ASP ASP B . n B 1 53 GLY 53 53 53 GLY GLY B . n B 1 54 ARG 54 54 54 ARG ARG B . n B 1 55 THR 55 55 55 THR THR B . n B 1 56 LEU 56 56 56 LEU LEU B . n B 1 57 SER 57 57 57 SER SER B . n B 1 58 ASP 58 58 58 ASP ASP B . n B 1 59 TYR 59 59 59 TYR TYR B . n B 1 60 ASN 60 60 60 ASN ASN B . n B 1 61 ILE 61 61 61 ILE ILE B . n B 1 62 GLN 62 62 62 GLN GLN B . n B 1 63 LYS 63 63 63 LYS LYS B . n B 1 64 GLU 64 64 64 GLU GLU B . n B 1 65 SER 65 65 65 SER SER B . n B 1 66 THR 66 66 66 THR THR B . n B 1 67 LEU 67 67 67 LEU LEU B . n B 1 68 HIS 68 68 68 HIS HIS B . n B 1 69 LEU 69 69 69 LEU LEU B . n B 1 70 VAL 70 70 70 VAL VAL B . n B 1 71 LEU 71 71 71 LEU LEU B . n B 1 72 ARG 72 72 72 ARG ARG B . n B 1 73 LEU 73 73 73 LEU LEU B . n B 1 74 ARG 74 74 74 ARG ARG B . n B 1 75 GLY 75 75 75 GLY GLY B . n B 1 76 GLY 76 76 76 GLY GLY B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 CD 1 1076 1076 CD CD A . D 3 MG 1 1078 1078 MG MG A . E 2 CD 1 1077 1077 CD CD B . F 4 CO 1 1079 1079 CO CO B . G 5 CL 1 1080 1080 CL CL B . H 4 CO 1 1081 1081 CO CO B . I 6 HOH 1 2001 2001 HOH HOH A . I 6 HOH 2 2002 2002 HOH HOH A . I 6 HOH 3 2003 2003 HOH HOH A . I 6 HOH 4 2004 2004 HOH HOH A . I 6 HOH 5 2005 2005 HOH HOH A . I 6 HOH 6 2006 2006 HOH HOH A . I 6 HOH 7 2007 2007 HOH HOH A . I 6 HOH 8 2008 2008 HOH HOH A . I 6 HOH 9 2009 2009 HOH HOH A . I 6 HOH 10 2010 2010 HOH HOH A . I 6 HOH 11 2011 2011 HOH HOH A . I 6 HOH 12 2012 2012 HOH HOH A . I 6 HOH 13 2013 2013 HOH HOH A . I 6 HOH 14 2014 2014 HOH HOH A . I 6 HOH 15 2015 2015 HOH HOH A . I 6 HOH 16 2016 2016 HOH HOH A . I 6 HOH 17 2017 2017 HOH HOH A . I 6 HOH 18 2018 2018 HOH HOH A . I 6 HOH 19 2019 2019 HOH HOH A . I 6 HOH 20 2020 2020 HOH HOH A . I 6 HOH 21 2021 2021 HOH HOH A . I 6 HOH 22 2022 2022 HOH HOH A . I 6 HOH 23 2023 2023 HOH HOH A . I 6 HOH 24 2024 2024 HOH HOH A . I 6 HOH 25 2025 2025 HOH HOH A . I 6 HOH 26 2026 2026 HOH HOH A . I 6 HOH 27 2027 2027 HOH HOH A . I 6 HOH 28 2028 2028 HOH HOH A . I 6 HOH 29 2029 2029 HOH HOH A . I 6 HOH 30 2030 2030 HOH HOH A . I 6 HOH 31 2031 2031 HOH HOH A . J 6 HOH 1 2001 2001 HOH HOH B . J 6 HOH 2 2002 2002 HOH HOH B . J 6 HOH 3 2003 2003 HOH HOH B . J 6 HOH 4 2004 2004 HOH HOH B . J 6 HOH 5 2005 2005 HOH HOH B . J 6 HOH 6 2006 2006 HOH HOH B . J 6 HOH 7 2007 2007 HOH HOH B . J 6 HOH 8 2008 2008 HOH HOH B . J 6 HOH 9 2009 2009 HOH HOH B . J 6 HOH 10 2010 2010 HOH HOH B . J 6 HOH 11 2011 2011 HOH HOH B . J 6 HOH 12 2012 2012 HOH HOH B . J 6 HOH 13 2013 2013 HOH HOH B . J 6 HOH 14 2014 2014 HOH HOH B . J 6 HOH 15 2015 2015 HOH HOH B . J 6 HOH 16 2016 2016 HOH HOH B . J 6 HOH 17 2017 2017 HOH HOH B . J 6 HOH 18 2018 2018 HOH HOH B . J 6 HOH 19 2019 2019 HOH HOH B . J 6 HOH 20 2020 2020 HOH HOH B . J 6 HOH 21 2021 2021 HOH HOH B . J 6 HOH 22 2022 2022 HOH HOH B . J 6 HOH 23 2023 2023 HOH HOH B . J 6 HOH 24 2024 2024 HOH HOH B . J 6 HOH 25 2025 2025 HOH HOH B . J 6 HOH 26 2026 2026 HOH HOH B . J 6 HOH 27 2027 2027 HOH HOH B . J 6 HOH 28 2028 2028 HOH HOH B . J 6 HOH 29 2029 2029 HOH HOH B . J 6 HOH 30 2030 2030 HOH HOH B . J 6 HOH 31 2031 2031 HOH HOH B . J 6 HOH 32 2032 2032 HOH HOH B . J 6 HOH 33 2033 2033 HOH HOH B . J 6 HOH 34 2034 2034 HOH HOH B . J 6 HOH 35 2035 2035 HOH HOH B . J 6 HOH 36 2036 2036 HOH HOH B . J 6 HOH 37 2037 2037 HOH HOH B . J 6 HOH 38 2038 2038 HOH HOH B . J 6 HOH 39 2039 2039 HOH HOH B . J 6 HOH 40 2040 2040 HOH HOH B . J 6 HOH 41 2041 2041 HOH HOH B . J 6 HOH 42 2042 2042 HOH HOH B . J 6 HOH 43 2043 2043 HOH HOH B . J 6 HOH 44 2044 2044 HOH HOH B . J 6 HOH 45 2045 2045 HOH HOH B . J 6 HOH 46 2046 2046 HOH HOH B . J 6 HOH 47 2047 2047 HOH HOH B . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 220 ? 1 MORE 0.6 ? 1 'SSA (A^2)' 10810 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2006 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id I _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 OD1 ? A ASP 21 ? A ASP 21 ? 1_555 CD A C CD . ? A CD 1076 ? 1_555 OE2 ? A GLU 18 ? A GLU 18 ? 1_555 130.1 ? 2 OD1 ? A ASP 21 ? A ASP 21 ? 1_555 CD A C CD . ? A CD 1076 ? 1_555 OE2 ? A GLU 18 ? A GLU 18 ? 12_664 101.4 ? 3 OE2 ? A GLU 18 ? A GLU 18 ? 1_555 CD A C CD . ? A CD 1076 ? 1_555 OE2 ? A GLU 18 ? A GLU 18 ? 12_664 117.8 ? 4 OE1 ? A GLU 18 ? A GLU 18 ? 12_664 CD B C CD . ? A CD 1076 ? 1_555 OD1 ? A ASP 21 ? A ASP 21 ? 1_555 83.1 ? 5 OE1 ? A GLU 18 ? A GLU 18 ? 12_664 CD B C CD . ? A CD 1076 ? 1_555 OD2 ? A ASP 21 ? A ASP 21 ? 1_555 130.7 ? 6 OD1 ? A ASP 21 ? A ASP 21 ? 1_555 CD B C CD . ? A CD 1076 ? 1_555 OD2 ? A ASP 21 ? A ASP 21 ? 1_555 53.6 ? 7 OE2 ? A GLU 16 ? A GLU 16 ? 1_555 MG ? D MG . ? A MG 1078 ? 1_555 O ? I HOH . ? A HOH 2005 ? 1_555 100.2 ? 8 OE2 ? A GLU 16 ? A GLU 16 ? 1_555 MG ? D MG . ? A MG 1078 ? 1_555 N ? A MET 1 ? A MET 1 ? 1_555 93.5 ? 9 O ? I HOH . ? A HOH 2005 ? 1_555 MG ? D MG . ? A MG 1078 ? 1_555 N ? A MET 1 ? A MET 1 ? 1_555 121.1 ? 10 OD1 ? B ASP 21 ? B ASP 21 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 OD2 ? B ASP 21 ? B ASP 21 ? 1_555 52.6 ? 11 OD1 ? B ASP 21 ? B ASP 21 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 CL ? G CL . ? B CL 1080 ? 1_555 137.8 ? 12 OD2 ? B ASP 21 ? B ASP 21 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 CL ? G CL . ? B CL 1080 ? 1_555 96.1 ? 13 OD1 ? B ASP 21 ? B ASP 21 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 NZ ? B LYS 29 ? B LYS 29 ? 1_555 126.9 ? 14 OD2 ? B ASP 21 ? B ASP 21 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 NZ ? B LYS 29 ? B LYS 29 ? 1_555 91.3 ? 15 CL ? G CL . ? B CL 1080 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 NZ ? B LYS 29 ? B LYS 29 ? 1_555 73.4 ? 16 OD1 ? B ASP 21 ? B ASP 21 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 OE2 ? B GLU 18 ? B GLU 18 ? 10_756 95.5 ? 17 OD2 ? B ASP 21 ? B ASP 21 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 OE2 ? B GLU 18 ? B GLU 18 ? 10_756 126.8 ? 18 CL ? G CL . ? B CL 1080 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 OE2 ? B GLU 18 ? B GLU 18 ? 10_756 126.6 ? 19 NZ ? B LYS 29 ? B LYS 29 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 OE2 ? B GLU 18 ? B GLU 18 ? 10_756 75.3 ? 20 OD1 ? B ASP 21 ? B ASP 21 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 OE1 ? B GLU 18 ? B GLU 18 ? 10_756 93.9 ? 21 OD2 ? B ASP 21 ? B ASP 21 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 OE1 ? B GLU 18 ? B GLU 18 ? 10_756 146.4 ? 22 CL ? G CL . ? B CL 1080 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 OE1 ? B GLU 18 ? B GLU 18 ? 10_756 110.9 ? 23 NZ ? B LYS 29 ? B LYS 29 ? 1_555 CD A E CD . ? B CD 1077 ? 1_555 OE1 ? B GLU 18 ? B GLU 18 ? 10_756 114.9 ? 24 OE2 ? B GLU 18 ? B GLU 18 ? 10_756 CD A E CD . ? B CD 1077 ? 1_555 OE1 ? B GLU 18 ? B GLU 18 ? 10_756 49.5 ? 25 OE1 ? B GLU 18 ? B GLU 18 ? 1_555 CD B E CD . ? B CD 1077 ? 1_555 OE1 ? B GLU 18 ? B GLU 18 ? 10_756 124.9 ? 26 OE1 ? B GLU 18 ? B GLU 18 ? 1_555 CD B E CD . ? B CD 1077 ? 1_555 OD1 ? B ASP 21 ? B ASP 21 ? 1_555 121.4 ? 27 OE1 ? B GLU 18 ? B GLU 18 ? 10_756 CD B E CD . ? B CD 1077 ? 1_555 OD1 ? B ASP 21 ? B ASP 21 ? 1_555 102.1 ? 28 O ? J HOH . ? B HOH 2047 ? 1_555 CO ? F CO . ? B CO 1079 ? 1_555 OD2 ? B ASP 32 ? B ASP 32 ? 7_674 118.1 ? 29 O ? J HOH . ? B HOH 2047 ? 1_555 CO ? F CO . ? B CO 1079 ? 1_555 OE2 ? B GLU 16 ? B GLU 16 ? 1_555 140.7 ? 30 OD2 ? B ASP 32 ? B ASP 32 ? 7_674 CO ? F CO . ? B CO 1079 ? 1_555 OE2 ? B GLU 16 ? B GLU 16 ? 1_555 93.2 ? 31 O ? J HOH . ? B HOH 2047 ? 1_555 CO ? F CO . ? B CO 1079 ? 1_555 N ? B MET 1 ? B MET 1 ? 1_555 110.6 ? 32 OD2 ? B ASP 32 ? B ASP 32 ? 7_674 CO ? F CO . ? B CO 1079 ? 1_555 N ? B MET 1 ? B MET 1 ? 1_555 90.8 ? 33 OE2 ? B GLU 16 ? B GLU 16 ? 1_555 CO ? F CO . ? B CO 1079 ? 1_555 N ? B MET 1 ? B MET 1 ? 1_555 90.5 ? 34 O ? J HOH . ? B HOH 2039 ? 1_555 CO ? H CO . ? B CO 1081 ? 1_555 NE2 ? B HIS 68 ? B HIS 68 ? 24_676 63.6 ? 35 O ? J HOH . ? B HOH 2039 ? 1_555 CO ? H CO . ? B CO 1081 ? 1_555 OE1 ? B GLU 64 ? B GLU 64 ? 1_555 68.3 ? 36 NE2 ? B HIS 68 ? B HIS 68 ? 24_676 CO ? H CO . ? B CO 1081 ? 1_555 OE1 ? B GLU 64 ? B GLU 64 ? 1_555 97.7 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-05 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Refinement description' 3 2 'Structure model' 'Version format compliance' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 63.7127 81.3647 32.5458 -0.2522 -0.2524 -0.1952 -0.0928 0.0305 -0.0305 6.1560 8.1923 2.6521 2.4955 2.2819 0.4569 0.1544 -0.0981 -0.6355 -0.3481 0.1542 -0.5479 0.1225 -0.0570 -0.3087 'X-RAY DIFFRACTION' 2 ? refined 92.3340 105.8642 43.9216 -0.2492 -0.2303 -0.2334 -0.0389 -0.0918 0.0329 6.8428 4.4467 4.2658 -0.0214 0.8271 -0.3700 -0.0068 -0.1890 -0.1400 -0.3220 0.1050 0.3767 0.1703 -0.3784 -0.0982 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 1 ? ? A 75 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 1 ? ? B 76 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.2.0019 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 NZ A LYS 63 ? ? C B GLY 76 ? ? 1.29 2 1 OE2 B GLU 64 ? ? O B HOH 2039 ? ? 1.92 3 1 O B HOH 2008 ? ? O B HOH 2028 ? ? 2.13 # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 C _pdbx_validate_rmsd_bond.auth_asym_id_1 B _pdbx_validate_rmsd_bond.auth_comp_id_1 GLY _pdbx_validate_rmsd_bond.auth_seq_id_1 76 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 O _pdbx_validate_rmsd_bond.auth_asym_id_2 B _pdbx_validate_rmsd_bond.auth_comp_id_2 GLY _pdbx_validate_rmsd_bond.auth_seq_id_2 76 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.391 _pdbx_validate_rmsd_bond.bond_target_value 1.232 _pdbx_validate_rmsd_bond.bond_deviation 0.159 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.016 _pdbx_validate_rmsd_bond.linker_flag N # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 76 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 76 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CADMIUM ION' CD 3 'MAGNESIUM ION' MG 4 'COBALT (II) ION' CO 5 'CHLORIDE ION' CL 6 water HOH #