HEADER HYDROLASE 04-FEB-07 2JFR TITLE CRYSTAL STRUCTURE OF THE PPM SER-THR PHOSPHATASE MSPP FROM TITLE 2 MYCOBACTERIUM SMEGMATIS IN COMPLEX WITH PHOSPHATE AT 0.83 A TITLE 3 RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: SER-THR PHOSPHATASE MSPP; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MYCOBACTERIUM SMEGMATIS; SOURCE 3 ORGANISM_TAXID: 246196; SOURCE 4 STRAIN: MC2 155; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET-28A KEYWDS HYDROLASE, PPM PHOSPHATASE, MYCOBACTERIUM, MANGANESE, PHOSPHATE EXPDTA X-RAY DIFFRACTION AUTHOR M.BELLINZONI,A.WEHENKEL,W.SHEPARD,P.M.ALZARI REVDAT 4 24-JUL-19 2JFR 1 REMARK REVDAT 3 22-MAY-19 2JFR 1 REMARK REVDAT 2 24-FEB-09 2JFR 1 VERSN REVDAT 1 24-JUL-07 2JFR 0 JRNL AUTH M.BELLINZONI,A.WEHENKEL,W.SHEPARD,P.M.ALZARI JRNL TITL INSIGHTS INTO THE MECHANISM OF PPM SER/THR PHOSPHATASES FROM JRNL TITL 2 THE ATOMIC RESOLUTION STRUCTURES OF A MYCOBACTERIAL ENZYME JRNL REF STRUCTURE V. 15 863 2007 JRNL REFN ISSN 0969-2126 JRNL PMID 17637345 JRNL DOI 10.1016/J.STR.2007.06.002 REMARK 2 REMARK 2 RESOLUTION. 0.83 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SHELXL-97 REMARK 3 AUTHORS : G.M.SHELDRICK REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 0.83 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 6.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 93.0 REMARK 3 CROSS-VALIDATION METHOD : FREE R-VALUE REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (NO CUTOFF). REMARK 3 R VALUE (WORKING + TEST SET, NO CUTOFF) : 0.096 REMARK 3 R VALUE (WORKING SET, NO CUTOFF) : 0.095 REMARK 3 FREE R VALUE (NO CUTOFF) : 0.124 REMARK 3 FREE R VALUE TEST SET SIZE (%, NO CUTOFF) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (NO CUTOFF) : 9444 REMARK 3 TOTAL NUMBER OF REFLECTIONS (NO CUTOFF) : 189170 REMARK 3 REMARK 3 FIT/AGREEMENT OF MODEL FOR DATA WITH F>4SIG(F). REMARK 3 R VALUE (WORKING + TEST SET, F>4SIG(F)) : 0.093 REMARK 3 R VALUE (WORKING SET, F>4SIG(F)) : 0.092 REMARK 3 FREE R VALUE (F>4SIG(F)) : 0.121 REMARK 3 FREE R VALUE TEST SET SIZE (%, F>4SIG(F)) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT (F>4SIG(F)) : 8291 REMARK 3 TOTAL NUMBER OF REFLECTIONS (F>4SIG(F)) : 166904 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1706 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 11 REMARK 3 SOLVENT ATOMS : 493 REMARK 3 REMARK 3 MODEL REFINEMENT. REMARK 3 OCCUPANCY SUM OF NON-HYDROGEN ATOMS : 2114.2 REMARK 3 OCCUPANCY SUM OF HYDROGEN ATOMS : 1632.9 REMARK 3 NUMBER OF DISCRETELY DISORDERED RESIDUES : 77 REMARK 3 NUMBER OF LEAST-SQUARES PARAMETERS : 21750 REMARK 3 NUMBER OF RESTRAINTS : 27732 REMARK 3 REMARK 3 RMS DEVIATIONS FROM RESTRAINT TARGET VALUES. REMARK 3 BOND LENGTHS (A) : 0.017 REMARK 3 ANGLE DISTANCES (A) : 0.035 REMARK 3 SIMILAR DISTANCES (NO TARGET VALUES) (A) : 0.024 REMARK 3 DISTANCES FROM RESTRAINT PLANES (A) : 0.029 REMARK 3 ZERO CHIRAL VOLUMES (A**3) : 0.106 REMARK 3 NON-ZERO CHIRAL VOLUMES (A**3) : 0.091 REMARK 3 ANTI-BUMPING DISTANCE RESTRAINTS (A) : 0.128 REMARK 3 RIGID-BOND ADP COMPONENTS (A**2) : 0.006 REMARK 3 SIMILAR ADP COMPONENTS (A**2) : 0.055 REMARK 3 APPROXIMATELY ISOTROPIC ADPS (A**2) : 0.173 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED: NULL REMARK 3 REMARK 3 STEREOCHEMISTRY TARGET VALUES : ENGH AND HUBER REMARK 3 SPECIAL CASE: NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 2JFR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 04-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1290030737. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 03-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 8.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : BW7A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8051 REMARK 200 MONOCHROMATOR : SI(311) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 189539 REMARK 200 RESOLUTION RANGE HIGH (A) : 0.830 REMARK 200 RESOLUTION RANGE LOW (A) : 10.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 93.2 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : 0.02000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 0.83 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 0.86 REMARK 200 COMPLETENESS FOR SHELL (%) : 88.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.48000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 44.50 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.21 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 30% PEG3350, 100 MM TRIS-HCL PH 8.5, REMARK 280 250 MM MGCL2, PH 8.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 38.19100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 41.99900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.19100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 41.99900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2157 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU A 123 O HOH A 2311 2.03 REMARK 500 O HOH A 2207 O HOH A 2208 2.10 REMARK 500 O HOH A 2038 O HOH A 2101 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 12 CB - CG - OD1 ANGL. DEV. = -7.3 DEGREES REMARK 500 ASP A 12 CB - CG - OD2 ANGL. DEV. = 9.2 DEGREES REMARK 500 ARG A 40 CD - NE - CZ ANGL. DEV. = 22.1 DEGREES REMARK 500 ARG A 40 NH1 - CZ - NH2 ANGL. DEV. = 16.4 DEGREES REMARK 500 ARG A 40 NE - CZ - NH1 ANGL. DEV. = -12.7 DEGREES REMARK 500 ARG A 40 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 GLU A 67 OE1 - CD - OE2 ANGL. DEV. = -7.9 DEGREES REMARK 500 GLU A 67 OE1 - CD - OE2 ANGL. DEV. = -8.3 DEGREES REMARK 500 ARG A 75 NH1 - CZ - NH2 ANGL. DEV. = 7.1 DEGREES REMARK 500 ARG A 75 NE - CZ - NH1 ANGL. DEV. = 3.1 DEGREES REMARK 500 ARG A 75 NE - CZ - NH2 ANGL. DEV. = -5.8 DEGREES REMARK 500 ASP A 82 CB - CG - OD1 ANGL. DEV. = -8.3 DEGREES REMARK 500 ARG A 118 NE - CZ - NH2 ANGL. DEV. = -4.6 DEGREES REMARK 500 ASP A 127 CB - CG - OD1 ANGL. DEV. = 11.7 DEGREES REMARK 500 ARG A 137 NH1 - CZ - NH2 ANGL. DEV. = -8.2 DEGREES REMARK 500 ARG A 137 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG A 137 NE - CZ - NH2 ANGL. DEV. = 8.0 DEGREES REMARK 500 ARG A 137 NE - CZ - NH2 ANGL. DEV. = -9.5 DEGREES REMARK 500 ARG A 143 CG - CD - NE ANGL. DEV. = 16.8 DEGREES REMARK 500 ARG A 143 CD - NE - CZ ANGL. DEV. = 27.1 DEGREES REMARK 500 ARG A 143 NE - CZ - NH1 ANGL. DEV. = 5.7 DEGREES REMARK 500 ARG A 143 NE - CZ - NH1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ARG A 143 NE - CZ - NH2 ANGL. DEV. = -4.8 DEGREES REMARK 500 ARG A 152 NE - CZ - NH1 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 152 NE - CZ - NH2 ANGL. DEV. = 3.3 DEGREES REMARK 500 ASP A 192 CB - CG - OD1 ANGL. DEV. = -7.0 DEGREES REMARK 500 ASP A 198 CB - CG - OD1 ANGL. DEV. = -6.8 DEGREES REMARK 500 ARG A 210 CD - NE - CZ ANGL. DEV. = 12.3 DEGREES REMARK 500 ARG A 210 NE - CZ - NH1 ANGL. DEV. = 4.3 DEGREES REMARK 500 ARG A 210 NE - CZ - NH2 ANGL. DEV. = -6.0 DEGREES REMARK 500 ARG A 211 NE - CZ - NH1 ANGL. DEV. = 8.3 DEGREES REMARK 500 ARG A 211 NE - CZ - NH2 ANGL. DEV. = -8.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 59 75.28 -156.52 REMARK 500 ALA A 190 -34.98 -151.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 525 REMARK 525 SOLVENT REMARK 525 REMARK 525 THE SOLVENT MOLECULES HAVE CHAIN IDENTIFIERS THAT REMARK 525 INDICATE THE POLYMER CHAIN WITH WHICH THEY ARE MOST REMARK 525 CLOSELY ASSOCIATED. THE REMARK LISTS ALL THE SOLVENT REMARK 525 MOLECULES WHICH ARE MORE THAN 5A AWAY FROM THE REMARK 525 NEAREST POLYMER CHAIN (M = MODEL NUMBER; REMARK 525 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE REMARK 525 NUMBER; I=INSERTION CODE): REMARK 525 REMARK 525 M RES CSSEQI REMARK 525 HOH A2007 DISTANCE = 6.55 ANGSTROMS REMARK 525 HOH A2055 DISTANCE = 6.21 ANGSTROMS REMARK 525 HOH A2073 DISTANCE = 6.60 ANGSTROMS REMARK 525 HOH A2097 DISTANCE = 6.71 ANGSTROMS REMARK 525 HOH A2099 DISTANCE = 5.87 ANGSTROMS REMARK 525 HOH A2211 DISTANCE = 5.82 ANGSTROMS REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1234 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2091 O REMARK 620 2 HOH A2131 O 89.2 REMARK 620 3 HOH A2486 O 92.2 89.9 REMARK 620 4 HOH A2487 O 95.4 170.1 81.2 REMARK 620 5 ASP A 35 OD1 169.9 83.2 94.4 93.1 REMARK 620 6 GLY A 36 O 84.3 101.3 168.2 87.9 90.6 REMARK 620 7 PO4 A1239 O3 91.8 100.7 10.8 70.4 96.2 157.6 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1235 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 35 OD2 REMARK 620 2 ASP A 223 OD2 168.0 REMARK 620 3 HOH A2485 O 83.2 87.0 REMARK 620 4 HOH A2486 O 100.3 86.5 89.3 REMARK 620 5 HOH A2488 O 93.9 96.9 170.5 82.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1236 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2288 O REMARK 620 2 HOH A2411 O 85.1 REMARK 620 3 HOH A2493 O 84.0 92.9 REMARK 620 4 HOH A2488 O 172.6 87.6 97.7 REMARK 620 5 PO4 A1239 O1 167.7 89.7 85.1 12.6 REMARK 620 6 HOH A2287 O 93.3 178.3 87.1 94.0 91.9 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1237 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2412 O REMARK 620 2 HOH A2411 O 29.7 REMARK 620 3 HOH A2363 O 79.2 87.3 REMARK 620 4 HOH A2410 O 96.0 79.7 160.1 REMARK 620 5 HOH A2365 O 165.1 165.1 98.1 91.2 REMARK 620 6 HOH A2361 O 97.9 123.1 106.9 92.9 68.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1240 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A2423 O REMARK 620 2 HOH A2056 O 88.5 REMARK 620 3 HOH A2052 O 93.8 176.8 REMARK 620 4 HOH A2026 O 87.9 90.2 87.7 REMARK 620 5 HOH A2025 O 92.2 89.4 92.8 179.5 REMARK 620 6 HOH A2054 O 175.5 87.2 90.5 91.2 88.7 REMARK 620 N 1 2 3 4 5 REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1234 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A1235 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1236 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1237 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A1238 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE PO4 A1239 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A1240 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JFS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PPM SER-THR PHOSPHATASE MSPP FROM REMARK 900 MYCOBACTERIUM SMEGMATIS IN COMPLEX WITH CACODYLATE REMARK 900 RELATED ID: 2JFT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE PPM SER-THR PHOSPHATASE MSPP FROM REMARK 900 MYCOBACTERIUM SMEGMATIS IN COMPLEX WITH SULFATE REMARK 999 REMARK 999 SEQUENCE REMARK 999 FIRST RESIDUE GLY IS A CLONING ARTIFACT DBREF 2JFR A 0 0 PDB 2JFR 2JFR 0 0 DBREF 2JFR A 1 233 UNP A0QTQ6 A0QTQ6_MYCSM 1 233 SEQRES 1 A 234 GLY MET ALA SER VAL LEU SER ALA ALA THR ALA THR ASP SEQRES 2 A 234 GLN GLY PRO VAL ARG GLU ASN ASN GLN ASP ALA CYS LEU SEQRES 3 A 234 ALA ASP GLY ILE LEU TYR ALA VAL ALA ASP GLY PHE GLY SEQRES 4 A 234 ALA ARG GLY HIS HIS ALA SER ALA THR ALA LEU LYS THR SEQRES 5 A 234 LEU SER ALA GLY PHE ALA ALA ALA PRO ASP ARG ASP GLY SEQRES 6 A 234 LEU LEU GLU ALA VAL GLN GLN ALA ASN LEU ARG VAL PHE SEQRES 7 A 234 GLU LEU LEU GLY ASP GLU PRO THR VAL SER GLY THR THR SEQRES 8 A 234 LEU THR ALA VAL ALA VAL PHE GLU PRO GLY GLN GLY GLY SEQRES 9 A 234 PRO LEU VAL VAL ASN ILE GLY ASP SER PRO LEU TYR ARG SEQRES 10 A 234 ILE ARG ASP GLY HIS MET GLU GLN LEU THR ASP ASP HIS SEQRES 11 A 234 SER VAL ALA GLY GLU LEU VAL ARG MET GLY GLU ILE THR SEQRES 12 A 234 ARG HIS GLU ALA ARG TRP HIS PRO GLN ARG HIS LEU LEU SEQRES 13 A 234 THR ARG ALA LEU GLY ILE GLY PRO HIS ILE GLY PRO ASP SEQRES 14 A 234 VAL PHE GLY ILE ASP CYS GLY PRO GLY ASP ARG LEU LEU SEQRES 15 A 234 ILE SER SER ASP GLY LEU PHE ALA ALA ALA ASP GLU ALA SEQRES 16 A 234 LEU ILE VAL ASP ALA ALA THR SER PRO ASP PRO GLN VAL SEQRES 17 A 234 ALA VAL ARG ARG LEU VAL GLU VAL ALA ASN ASP ALA GLY SEQRES 18 A 234 GLY SER ASP ASN THR THR VAL VAL VAL ILE ASP LEU GLY HET MG A1234 1 HET MN A1235 1 HET MG A1236 1 HET MG A1237 1 HET CL A1238 1 HET PO4 A1239 5 HET MG A1240 1 HETNAM MG MAGNESIUM ION HETNAM MN MANGANESE (II) ION HETNAM CL CHLORIDE ION HETNAM PO4 PHOSPHATE ION FORMUL 2 MG 4(MG 2+) FORMUL 3 MN MN 2+ FORMUL 6 CL CL 1- FORMUL 7 PO4 O4 P 3- FORMUL 9 HOH *493(H2 O) HELIX 1 1 ARG A 40 ALA A 59 1 20 HELIX 2 2 ASP A 61 GLY A 81 1 21 HELIX 3 3 GLU A 98 GLY A 102 5 5 HELIX 4 4 SER A 130 MET A 138 1 9 HELIX 5 5 THR A 142 ARG A 147 1 6 HELIX 6 6 ASP A 185 ALA A 189 5 5 HELIX 7 7 ASP A 192 THR A 201 1 10 HELIX 8 8 ASP A 204 ALA A 219 1 16 SHEET 1 AA 5 VAL A 4 ASP A 12 0 SHEET 2 AA 5 THR A 225 LEU A 232 -1 O THR A 225 N ASP A 12 SHEET 3 AA 5 ARG A 179 SER A 183 -1 O LEU A 180 N ILE A 230 SHEET 4 AA 5 LEU A 114 ARG A 118 -1 O TYR A 115 N LEU A 181 SHEET 5 AA 5 HIS A 121 GLN A 124 -1 O HIS A 121 N ARG A 118 SHEET 1 AB 5 ASP A 22 ASP A 27 0 SHEET 2 AB 5 LEU A 30 PHE A 37 -1 O LEU A 30 N ASP A 27 SHEET 3 AB 5 LEU A 91 ALA A 95 -1 O THR A 92 N VAL A 33 SHEET 4 AB 5 LEU A 105 ILE A 109 -1 O LEU A 105 N ALA A 95 SHEET 5 AB 5 ASP A 168 GLY A 171 -1 O ASP A 168 N ASN A 108 SHEET 1 AC 3 ASP A 22 ASP A 27 0 SHEET 2 AC 3 LEU A 30 PHE A 37 -1 O LEU A 30 N ASP A 27 SHEET 3 AC 3 GLY A 88 THR A 89 -1 O GLY A 88 N PHE A 37 LINK MG MG A1234 O HOH A2091 1555 1555 2.07 LINK MG MG A1234 O HOH A2131 1555 1555 2.07 LINK MG MG A1234 O HOH A2486 1555 1555 2.12 LINK MG MG A1234 O HOH A2487 1555 1555 2.05 LINK MG MG A1234 OD1 ASP A 35 1555 1555 2.00 LINK MG MG A1234 O GLY A 36 1555 1555 2.07 LINK MG MG A1234 O3 APO4 A1239 1555 1555 2.03 LINK MN MN A1235 OD2 ASP A 35 1555 1555 2.10 LINK MN MN A1235 OD2 ASP A 223 1555 1555 2.12 LINK MN MN A1235 O HOH A2485 1555 1555 2.11 LINK MN MN A1235 O HOH A2486 1555 1555 2.22 LINK MN MN A1235 O HOH A2488 1555 1555 2.05 LINK MG MG A1236 O HOH A2288 1555 1555 1.96 LINK MG MG A1236 O HOH A2411 1555 1555 2.08 LINK MG MG A1236 O HOH A2493 1555 1555 2.03 LINK MG MG A1236 O HOH A2488 1555 1555 1.82 LINK MG MG A1236 O1 APO4 A1239 1555 1555 1.80 LINK MG MG A1236 O HOH A2287 1555 1555 2.15 LINK MG MG A1237 O HOH A2412 1555 1555 1.92 LINK MG MG A1237 O HOH A2411 1555 1555 2.87 LINK MG MG A1237 O HOH A2363 1555 1555 2.16 LINK MG MG A1237 O HOH A2410 1555 1555 2.02 LINK MG MG A1237 O HOH A2365 1555 1555 1.94 LINK MG MG A1237 O HOH A2361 1555 1555 2.44 LINK MG MG A1240 O HOH A2423 1555 1556 2.12 LINK MG MG A1240 O HOH A2056 1555 1555 1.86 LINK MG MG A1240 O HOH A2052 1555 1555 2.13 LINK MG MG A1240 O HOH A2026 1555 1555 2.09 LINK MG MG A1240 O HOH A2025 1555 1555 2.04 LINK MG MG A1240 O HOH A2054 1555 1555 2.14 SITE 1 AC1 7 ASP A 35 GLY A 36 PO4 A1239 HOH A2091 SITE 2 AC1 7 HOH A2131 HOH A2486 HOH A2487 SITE 1 AC2 8 ASP A 35 ASP A 185 ASP A 223 MG A1236 SITE 2 AC2 8 PO4 A1239 HOH A2485 HOH A2486 HOH A2488 SITE 1 AC3 9 ASP A 111 ASP A 185 MN A1235 PO4 A1239 SITE 2 AC3 9 HOH A2287 HOH A2288 HOH A2411 HOH A2488 SITE 3 AC3 9 HOH A2493 SITE 1 AC4 7 ASP A 185 HOH A2361 HOH A2363 HOH A2365 SITE 2 AC4 7 HOH A2410 HOH A2411 HOH A2412 SITE 1 AC5 5 GLY A 14 PRO A 15 ASN A 217 HOH A2047 SITE 2 AC5 5 HOH A2305 SITE 1 AC6 20 ARG A 17 ASP A 35 GLY A 36 PHE A 37 SITE 2 AC6 20 ASP A 185 ASP A 223 MG A1234 MN A1235 SITE 3 AC6 20 MG A1236 HOH A2091 HOH A2287 HOH A2411 SITE 4 AC6 20 HOH A2486 HOH A2487 HOH A2488 HOH A2489 SITE 5 AC6 20 HOH A2490 HOH A2491 HOH A2492 HOH A2493 SITE 1 AC7 6 HOH A2025 HOH A2026 HOH A2052 HOH A2054 SITE 2 AC7 6 HOH A2056 HOH A2423 CRYST1 76.382 83.998 33.478 90.00 90.00 90.00 P 21 21 2 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013092 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011905 0.000000 0.00000 SCALE3 0.000000 0.000000 0.029870 0.00000