HEADER TRANSFERASE 08-FEB-07 2JG5 TITLE CRYSTAL STRUCTURE OF A PUTATIVE PHOSPHOFRUCTOKINASE FROM TITLE 2 STAPHYLOCOCCUS AUREUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: FRUCTOSE 1-PHOSPHATE KINASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.1.56; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS AUREUS; SOURCE 3 ORGANISM_TAXID: 1280; SOURCE 4 STRAIN: MRSA252; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PDEST14 KEYWDS KINASE, 1-PHOSPHOFRUCTOKINASE, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR X.YAN,L.G.CARTER,K.A.JOHNSON,H.LIU,M.DORWARD,S.A.MCMAHON,M.OKE, AUTHOR 2 H.POWERS,P.J.COOTE,J.H.NAISMITH REVDAT 6 13-DEC-23 2JG5 1 REMARK REVDAT 5 11-MAR-20 2JG5 1 REMARK REVDAT 4 28-SEP-11 2JG5 1 AUTHOR JRNL REMARK REVDAT 3 13-JUL-11 2JG5 1 VERSN REVDAT 2 24-FEB-09 2JG5 1 VERSN REVDAT 1 27-FEB-07 2JG5 0 JRNL AUTH M.OKE,L.G.CARTER,K.A.JOHNSON,H.LIU,S.A.MCMAHON,X.YAN, JRNL AUTH 2 M.KEROU,N.D.WEIKART,N.KADI,M.A.SHEIKH,S.SCHMELZ,M.DORWARD, JRNL AUTH 3 M.ZAWADZKI,C.COZENS,H.FALCONER,H.POWERS,I.M.OVERTON, JRNL AUTH 4 C.A.J.VAN NIEKERK,X.PENG,P.PATEL,R.A.GARRETT,D.PRANGISHVILI, JRNL AUTH 5 C.H.BOTTING,P.J.COOTE,D.T.F.DRYDEN,G.J.BARTON, JRNL AUTH 6 U.SCHWARZ-LINEK,G.L.CHALLIS,G.L.TAYLOR,M.F.WHITE, JRNL AUTH 7 J.H.NAISMITH JRNL TITL THE SCOTTISH STRUCTURAL PROTEOMICS FACILITY: TARGETS, JRNL TITL 2 METHODS AND OUTPUTS. JRNL REF J.STRUCT.FUNCT.GENOMICS V. 11 167 2010 JRNL REFN ISSN 1345-711X JRNL PMID 20419351 JRNL DOI 10.1007/S10969-010-9090-Y REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.75 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 24100 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.215 REMARK 3 R VALUE (WORKING SET) : 0.212 REMARK 3 FREE R VALUE : 0.276 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1290 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1649 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 94.57 REMARK 3 BIN R VALUE (WORKING SET) : 0.2790 REMARK 3 BIN FREE R VALUE SET COUNT : 75 REMARK 3 BIN FREE R VALUE : 0.3520 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4572 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 130 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.09000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : 0.13000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.468 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.286 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.247 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.902 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.930 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.870 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4634 ; 0.011 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 6294 ; 1.195 ; 1.964 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 610 ; 5.862 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 186 ;36.892 ;26.559 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 792 ;14.990 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;19.671 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 766 ; 0.076 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3424 ; 0.003 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 2222 ; 0.205 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3296 ; 0.300 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 230 ; 0.134 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 89 ; 0.227 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 11 ; 0.163 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 3094 ; 0.381 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 4910 ; 0.644 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1679 ; 0.994 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1384 ; 1.580 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 6 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 1 A 8 4 REMARK 3 1 B 1 B 8 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 1 A (A): 68 ; 0.13 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 68 ; 0.37 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 7 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 38 A 61 4 REMARK 3 1 B 38 B 61 4 REMARK 3 2 A 106 A 159 4 REMARK 3 2 B 106 B 159 4 REMARK 3 3 A 167 A 176 4 REMARK 3 3 B 167 B 176 4 REMARK 3 4 A 202 A 279 4 REMARK 3 4 B 202 B 279 4 REMARK 3 5 A 287 A 297 4 REMARK 3 5 B 287 B 297 4 REMARK 3 6 A 63 A 68 4 REMARK 3 6 B 63 B 68 4 REMARK 3 7 A 70 A 81 4 REMARK 3 7 B 70 B 81 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 A (A): 1418 ; 0.31 ; 0.50 REMARK 3 MEDIUM THERMAL 2 A (A**2): 1418 ; 0.47 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 3 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 177 A 189 4 REMARK 3 1 B 177 B 189 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 3 A (A): 112 ; 0.21 ; 0.50 REMARK 3 MEDIUM THERMAL 3 A (A**2): 112 ; 0.48 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 4 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 298 A 305 4 REMARK 3 1 B 298 B 305 4 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 4 A (A): 55 ; 0.35 ; 0.50 REMARK 3 MEDIUM THERMAL 4 A (A**2): 55 ; 0.30 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 5 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 89 A 93 5 REMARK 3 1 B 89 B 93 5 REMARK 3 2 A 98 A 105 5 REMARK 3 2 B 98 B 105 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 5 A (A): 52 ; 0.14 ; 0.50 REMARK 3 LOOSE POSITIONAL 5 A (A): 45 ; 0.58 ; 5.00 REMARK 3 MEDIUM THERMAL 5 A (A**2): 52 ; 0.26 ; 2.00 REMARK 3 LOOSE THERMAL 5 A (A**2): 45 ; 0.69 ; 10.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 6 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 12 A 16 5 REMARK 3 1 B 12 B 16 5 REMARK 3 2 A 26 A 32 5 REMARK 3 2 B 26 B 32 5 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 6 A (A): 48 ; 0.15 ; 0.50 REMARK 3 LOOSE POSITIONAL 6 A (A): 53 ; 0.83 ; 5.00 REMARK 3 MEDIUM THERMAL 6 A (A**2): 48 ; 0.40 ; 2.00 REMARK 3 LOOSE THERMAL 6 A (A**2): 53 ; 1.29 ; 10.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 9 REMARK 3 RESIDUE RANGE : A 38 A 88 REMARK 3 ORIGIN FOR THE GROUP (A): 8.8485 68.1168 12.1645 REMARK 3 T TENSOR REMARK 3 T11: -0.0944 T22: -0.1062 REMARK 3 T33: -0.1186 T12: -0.0097 REMARK 3 T13: -0.0450 T23: 0.0325 REMARK 3 L TENSOR REMARK 3 L11: 3.2835 L22: 4.5263 REMARK 3 L33: 1.0392 L12: 0.1767 REMARK 3 L13: -0.5793 L23: 0.4917 REMARK 3 S TENSOR REMARK 3 S11: -0.0217 S12: -0.0435 S13: 0.0050 REMARK 3 S21: 0.3272 S22: 0.0496 S23: 0.6096 REMARK 3 S31: -0.0214 S32: -0.1600 S33: -0.0279 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 106 A 306 REMARK 3 ORIGIN FOR THE GROUP (A): 20.4049 55.9232 3.2341 REMARK 3 T TENSOR REMARK 3 T11: -0.0745 T22: -0.0617 REMARK 3 T33: -0.0983 T12: -0.0147 REMARK 3 T13: -0.0697 T23: 0.0194 REMARK 3 L TENSOR REMARK 3 L11: 1.1677 L22: 3.9284 REMARK 3 L33: 1.0973 L12: -0.3673 REMARK 3 L13: -0.8821 L23: 1.5025 REMARK 3 S TENSOR REMARK 3 S11: -0.0355 S12: 0.1676 S13: 0.0206 REMARK 3 S21: -0.2291 S22: 0.0836 S23: -0.1110 REMARK 3 S31: 0.0273 S32: 0.0443 S33: -0.0481 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 9 REMARK 3 RESIDUE RANGE : B 38 B 88 REMARK 3 ORIGIN FOR THE GROUP (A): -8.6693 91.6636 8.9124 REMARK 3 T TENSOR REMARK 3 T11: -0.1138 T22: -0.0283 REMARK 3 T33: -0.1015 T12: -0.0291 REMARK 3 T13: 0.0174 T23: -0.0432 REMARK 3 L TENSOR REMARK 3 L11: 1.8704 L22: 7.5555 REMARK 3 L33: 1.0313 L12: -1.1833 REMARK 3 L13: 0.0150 L23: -0.0970 REMARK 3 S TENSOR REMARK 3 S11: -0.2582 S12: -0.0448 S13: 0.0519 REMARK 3 S21: 0.3385 S22: 0.2257 S23: -0.4572 REMARK 3 S31: 0.0019 S32: 0.3374 S33: 0.0325 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 106 B 306 REMARK 3 ORIGIN FOR THE GROUP (A): -20.1567 103.5395 -1.2351 REMARK 3 T TENSOR REMARK 3 T11: -0.0492 T22: -0.0068 REMARK 3 T33: -0.1042 T12: -0.0283 REMARK 3 T13: 0.0639 T23: -0.0308 REMARK 3 L TENSOR REMARK 3 L11: 0.7557 L22: 2.5771 REMARK 3 L33: 1.2507 L12: -0.6429 REMARK 3 L13: 0.7092 L23: -1.1987 REMARK 3 S TENSOR REMARK 3 S11: -0.0200 S12: 0.2057 S13: 0.0891 REMARK 3 S21: -0.2258 S22: -0.0396 S23: -0.1240 REMARK 3 S31: 0.0125 S32: 0.1094 S33: 0.0596 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 10 A 37 REMARK 3 RESIDUE RANGE : A 89 A 105 REMARK 3 ORIGIN FOR THE GROUP (A): -0.4799 73.4024 -6.9891 REMARK 3 T TENSOR REMARK 3 T11: -0.0178 T22: 0.0184 REMARK 3 T33: -0.0713 T12: -0.0766 REMARK 3 T13: 0.0102 T23: -0.1094 REMARK 3 L TENSOR REMARK 3 L11: 6.3323 L22: 3.2722 REMARK 3 L33: 3.8352 L12: 0.3368 REMARK 3 L13: -0.2036 L23: -1.1210 REMARK 3 S TENSOR REMARK 3 S11: -0.2467 S12: 0.9322 S13: -0.5371 REMARK 3 S21: -0.4627 S22: 0.1123 S23: 0.0749 REMARK 3 S31: 0.2531 S32: -0.1699 S33: 0.1344 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 10 B 37 REMARK 3 RESIDUE RANGE : B 89 B 105 REMARK 3 ORIGIN FOR THE GROUP (A): 3.2026 82.2362 -7.6529 REMARK 3 T TENSOR REMARK 3 T11: -0.0213 T22: -0.0056 REMARK 3 T33: -0.1313 T12: -0.0293 REMARK 3 T13: 0.0214 T23: 0.0219 REMARK 3 L TENSOR REMARK 3 L11: 8.0906 L22: 2.0554 REMARK 3 L33: 2.8883 L12: 0.9373 REMARK 3 L13: -2.7995 L23: 0.8365 REMARK 3 S TENSOR REMARK 3 S11: 0.0148 S12: 1.0021 S13: 0.1679 REMARK 3 S21: -0.3531 S22: 0.0524 S23: -0.0531 REMARK 3 S31: -0.1251 S32: -0.1571 S33: -0.0672 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JG5 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 08-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1290031304. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-MAR-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 5.60 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : BM14 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.976 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XDS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25486 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.280 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.1 REMARK 200 DATA REDUNDANCY : 4.800 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 11.6500 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.28 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.1 REMARK 200 DATA REDUNDANCY IN SHELL : 4.80 REMARK 200 R MERGE FOR SHELL (I) : 0.11000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 11.65 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2ABQ REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.00 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2 M AMMONIUM ACETATE, 0.1M SODIUM REMARK 280 CITRATE TRIBASIC DIHYDRATE PH 5.6, 30% W/V PEG 4000, PH 5.60 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.50500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 20.37000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 80.13000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 20.37000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.50500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 80.13000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2600 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25550 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -20.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLU A 306 CG CD OE1 OE2 REMARK 470 GLU B 306 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 LYS A 240 CD LYS A 240 CE 0.196 REMARK 500 LYS A 240 CE LYS A 240 NZ 0.356 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LYS A 240 CD - CE - NZ ANGL. DEV. = -14.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 50 37.02 74.21 REMARK 500 ASN A 79 57.65 -146.31 REMARK 500 THR A 95 -130.14 -104.52 REMARK 500 PRO A 172 -9.64 -59.36 REMARK 500 ASN A 190 64.43 33.46 REMARK 500 ASP A 284 -138.12 -119.65 REMARK 500 ASP B 19 -175.90 60.25 REMARK 500 ASP B 23 9.83 81.36 REMARK 500 ASN B 79 57.33 -145.57 REMARK 500 ASP B 161 76.07 -119.06 REMARK 500 ASN B 194 22.96 -142.52 REMARK 500 ASN B 243 109.18 -160.99 REMARK 500 ASP B 284 -148.95 -122.69 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. DBREF 2JG5 A 1 306 UNP Q9KWK1 Q9KWK1_STAAU 1 306 DBREF 2JG5 B 1 306 UNP Q9KWK1 Q9KWK1_STAAU 1 306 SEQADV 2JG5 TYR A 173 UNP Q9KWK1 PHE 173 CONFLICT SEQADV 2JG5 SER A 264 UNP Q9KWK1 THR 264 CONFLICT SEQADV 2JG5 TYR B 173 UNP Q9KWK1 PHE 173 CONFLICT SEQADV 2JG5 SER B 264 UNP Q9KWK1 THR 264 CONFLICT SEQRES 1 A 306 MET ILE TYR THR VAL THR PHE ASN PRO SER ILE ASP TYR SEQRES 2 A 306 VAL ILE PHE THR ASN ASP PHE LYS ILE ASP GLY LEU ASN SEQRES 3 A 306 ARG ALA THR ALA THR TYR LYS PHE ALA GLY GLY LYS GLY SEQRES 4 A 306 ILE ASN VAL SER ARG VAL LEU LYS THR LEU ASP VAL GLU SEQRES 5 A 306 SER THR ALA LEU GLY PHE ALA GLY GLY PHE PRO GLY LYS SEQRES 6 A 306 PHE ILE ILE ASP THR LEU ASN ASN SER ALA ILE GLN SER SEQRES 7 A 306 ASN PHE ILE GLU VAL ASP GLU ASP THR ARG ILE ASN VAL SEQRES 8 A 306 LYS LEU LYS THR GLY GLN GLU THR GLU ILE ASN ALA PRO SEQRES 9 A 306 GLY PRO HIS ILE THR SER THR GLN PHE GLU GLN LEU LEU SEQRES 10 A 306 GLN GLN ILE LYS ASN THR THR SER GLU ASP ILE VAL ILE SEQRES 11 A 306 VAL ALA GLY SER VAL PRO SER SER ILE PRO SER ASP ALA SEQRES 12 A 306 TYR ALA GLN ILE ALA GLN ILE THR ALA GLN THR GLY ALA SEQRES 13 A 306 LYS LEU VAL VAL ASP ALA GLU LYS GLU LEU ALA GLU SER SEQRES 14 A 306 VAL LEU PRO TYR HIS PRO LEU PHE ILE LYS PRO ASN LYS SEQRES 15 A 306 ASP GLU LEU GLU VAL MET PHE ASN THR THR VAL ASN SER SEQRES 16 A 306 ASP ALA ASP VAL ILE LYS TYR GLY ARG LEU LEU VAL ASP SEQRES 17 A 306 LYS GLY ALA GLN SER VAL ILE VAL SER LEU GLY GLY ASP SEQRES 18 A 306 GLY ALA ILE TYR ILE ASP LYS GLU ILE SER ILE LYS ALA SEQRES 19 A 306 VAL ASN PRO GLN GLY LYS VAL VAL ASN THR VAL GLY SER SEQRES 20 A 306 GLY ASP SER THR VAL ALA GLY MET VAL ALA GLY ILE ALA SEQRES 21 A 306 SER GLY LEU SER ILE GLU LYS ALA PHE GLN GLN ALA VAL SEQRES 22 A 306 ALA CYS GLY THR ALA THR ALA PHE ASP GLU ASP LEU ALA SEQRES 23 A 306 THR ARG ASP ALA ILE GLU LYS ILE LYS SER GLN VAL THR SEQRES 24 A 306 ILE SER VAL LEU ASP GLY GLU SEQRES 1 B 306 MET ILE TYR THR VAL THR PHE ASN PRO SER ILE ASP TYR SEQRES 2 B 306 VAL ILE PHE THR ASN ASP PHE LYS ILE ASP GLY LEU ASN SEQRES 3 B 306 ARG ALA THR ALA THR TYR LYS PHE ALA GLY GLY LYS GLY SEQRES 4 B 306 ILE ASN VAL SER ARG VAL LEU LYS THR LEU ASP VAL GLU SEQRES 5 B 306 SER THR ALA LEU GLY PHE ALA GLY GLY PHE PRO GLY LYS SEQRES 6 B 306 PHE ILE ILE ASP THR LEU ASN ASN SER ALA ILE GLN SER SEQRES 7 B 306 ASN PHE ILE GLU VAL ASP GLU ASP THR ARG ILE ASN VAL SEQRES 8 B 306 LYS LEU LYS THR GLY GLN GLU THR GLU ILE ASN ALA PRO SEQRES 9 B 306 GLY PRO HIS ILE THR SER THR GLN PHE GLU GLN LEU LEU SEQRES 10 B 306 GLN GLN ILE LYS ASN THR THR SER GLU ASP ILE VAL ILE SEQRES 11 B 306 VAL ALA GLY SER VAL PRO SER SER ILE PRO SER ASP ALA SEQRES 12 B 306 TYR ALA GLN ILE ALA GLN ILE THR ALA GLN THR GLY ALA SEQRES 13 B 306 LYS LEU VAL VAL ASP ALA GLU LYS GLU LEU ALA GLU SER SEQRES 14 B 306 VAL LEU PRO TYR HIS PRO LEU PHE ILE LYS PRO ASN LYS SEQRES 15 B 306 ASP GLU LEU GLU VAL MET PHE ASN THR THR VAL ASN SER SEQRES 16 B 306 ASP ALA ASP VAL ILE LYS TYR GLY ARG LEU LEU VAL ASP SEQRES 17 B 306 LYS GLY ALA GLN SER VAL ILE VAL SER LEU GLY GLY ASP SEQRES 18 B 306 GLY ALA ILE TYR ILE ASP LYS GLU ILE SER ILE LYS ALA SEQRES 19 B 306 VAL ASN PRO GLN GLY LYS VAL VAL ASN THR VAL GLY SER SEQRES 20 B 306 GLY ASP SER THR VAL ALA GLY MET VAL ALA GLY ILE ALA SEQRES 21 B 306 SER GLY LEU SER ILE GLU LYS ALA PHE GLN GLN ALA VAL SEQRES 22 B 306 ALA CYS GLY THR ALA THR ALA PHE ASP GLU ASP LEU ALA SEQRES 23 B 306 THR ARG ASP ALA ILE GLU LYS ILE LYS SER GLN VAL THR SEQRES 24 B 306 ILE SER VAL LEU ASP GLY GLU FORMUL 3 HOH *130(H2 O) HELIX 1 1 GLY A 37 LEU A 49 1 13 HELIX 2 2 GLY A 60 SER A 74 1 15 HELIX 3 3 THR A 109 LYS A 121 1 13 HELIX 4 4 ASP A 142 GLY A 155 1 14 HELIX 5 5 GLU A 163 LEU A 171 1 9 HELIX 6 6 PRO A 172 HIS A 174 5 3 HELIX 7 7 ASN A 181 PHE A 189 1 9 HELIX 8 8 SER A 195 LYS A 209 1 15 HELIX 9 9 GLY A 219 ASP A 221 5 3 HELIX 10 10 GLY A 246 SER A 261 1 16 HELIX 11 11 SER A 264 PHE A 281 1 18 HELIX 12 12 THR A 287 SER A 296 1 10 HELIX 13 13 GLY B 37 LEU B 49 1 13 HELIX 14 14 GLY B 61 SER B 74 1 14 HELIX 15 15 THR B 109 ASN B 122 1 14 HELIX 16 16 ASP B 142 GLY B 155 1 14 HELIX 17 17 GLU B 163 LEU B 171 1 9 HELIX 18 18 PRO B 172 HIS B 174 5 3 HELIX 19 19 ASN B 181 ASN B 190 1 10 HELIX 20 20 SER B 195 LYS B 209 1 15 HELIX 21 21 GLY B 219 ASP B 221 5 3 HELIX 22 22 GLY B 246 SER B 261 1 16 HELIX 23 23 SER B 264 ASP B 282 1 19 HELIX 24 24 THR B 287 VAL B 298 1 12 SHEET 1 AA 6 GLN A 77 SER A 78 0 SHEET 2 AA 6 THR A 54 ALA A 59 1 N ALA A 55 O GLN A 77 SHEET 3 AA 6 ILE A 2 THR A 6 1 O ILE A 2 N THR A 54 SHEET 4 AA 6 ILE A 128 ALA A 132 1 O ILE A 128 N TYR A 3 SHEET 5 AA 6 LYS A 157 ASP A 161 1 O LYS A 157 N VAL A 129 SHEET 6 AA 6 PHE A 177 ILE A 178 1 O PHE A 177 N VAL A 160 SHEET 1 AB 3 GLN A 77 SER A 78 0 SHEET 2 AB 3 THR A 54 ALA A 59 1 N ALA A 55 O GLN A 77 SHEET 3 AB 3 ILE A 81 GLU A 82 1 O ILE A 81 N ALA A 59 SHEET 1 AC 9 LEU A 25 ARG A 27 0 SHEET 2 AC 9 THR B 99 ASN B 102 1 O GLU B 100 N ASN A 26 SHEET 3 AC 9 ARG B 88 LEU B 93 -1 O VAL B 91 N ILE B 101 SHEET 4 AC 9 SER B 10 THR B 17 1 O ILE B 11 N ASN B 90 SHEET 5 AC 9 LEU B 25 GLY B 36 -1 N THR B 29 O PHE B 16 SHEET 6 AC 9 GLU A 98 ASN A 102 1 O GLU A 100 N ASN B 26 SHEET 7 AC 9 ARG A 88 LYS A 94 -1 O VAL A 91 N ILE A 101 SHEET 8 AC 9 SER A 10 PHE A 16 1 O ILE A 11 N ASN A 90 SHEET 9 AC 9 ALA A 30 GLY A 36 -1 O ALA A 30 N PHE A 16 SHEET 1 AD 4 VAL A 214 SER A 217 0 SHEET 2 AD 4 ALA A 223 ILE A 226 -1 O ILE A 224 N VAL A 216 SHEET 3 AD 4 ILE A 230 VAL A 235 -1 O ILE A 232 N TYR A 225 SHEET 4 AD 4 THR A 299 GLY A 305 -1 O THR A 299 N VAL A 235 SHEET 1 BA 5 GLN B 77 SER B 78 0 SHEET 2 BA 5 THR B 54 GLY B 60 1 N ALA B 55 O GLN B 77 SHEET 3 BA 5 ILE B 2 THR B 6 1 O ILE B 2 N THR B 54 SHEET 4 BA 5 ILE B 128 ALA B 132 1 O ILE B 128 N TYR B 3 SHEET 5 BA 5 LYS B 157 ASP B 161 1 O LYS B 157 N VAL B 129 SHEET 1 BB 3 GLN B 77 SER B 78 0 SHEET 2 BB 3 THR B 54 GLY B 60 1 N ALA B 55 O GLN B 77 SHEET 3 BB 3 ILE B 81 VAL B 83 1 O ILE B 81 N ALA B 59 SHEET 1 BC 4 VAL B 214 SER B 217 0 SHEET 2 BC 4 ALA B 223 ILE B 226 -1 O ILE B 224 N VAL B 216 SHEET 3 BC 4 ILE B 230 VAL B 235 -1 O ILE B 232 N TYR B 225 SHEET 4 BC 4 THR B 299 GLY B 305 -1 O THR B 299 N VAL B 235 CRYST1 85.010 160.260 40.740 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011763 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006240 0.000000 0.00000 SCALE3 0.000000 0.000000 0.024546 0.00000 MTRIX1 1 -0.998080 -0.005740 -0.061610 1.09623 1 MTRIX2 1 0.000150 -0.995910 0.090330 158.37270 1 MTRIX3 1 -0.061880 0.090150 0.994000 -8.19110 1