HEADER INHIBITOR 23-FEB-07 2JHV TITLE CRYSTAL STRUCTURE OF RHOGDI E154A,E155A MUTANT COMPND MOL_ID: 1; COMPND 2 MOLECULE: RHO GDP-DISSOCIATION INHIBITOR 1; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 FRAGMENT: ISOPRENYL-BINDING DOMAIN, RESIDUES 66-201; COMPND 5 SYNONYM: RHO GDI 1, RHO-GDI ALPHA; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PGST-PARALLEL1 KEYWDS SURFACE ENTROPY REDUCTION, INHIBITOR, GTPASE ACTIVATION, CRYSTAL KEYWDS 2 ENGINEERING EXPDTA X-RAY DIFFRACTION AUTHOR D.R.COOPER,M.PINKOWSKA,Z.S.DEREWENDA REVDAT 4 13-DEC-23 2JHV 1 REMARK REVDAT 3 13-JUL-11 2JHV 1 VERSN REVDAT 2 24-FEB-09 2JHV 1 VERSN REVDAT 1 08-MAY-07 2JHV 0 JRNL AUTH D.R.COOPER,T.BOCZEK,K.GRELEWSKA,M.PINKOWSKA,M.SIKORSKA, JRNL AUTH 2 M.ZAWADZKI,Z.S.DEREWENDA JRNL TITL PROTEIN CRYSTALLIZATION BY SURFACE ENTROPY REDUCTION: JRNL TITL 2 OPTIMIZATION OF THE SER STRATEGY JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 63 636 2007 JRNL REFN ISSN 0907-4449 JRNL PMID 17452789 JRNL DOI 10.1107/S0907444907010931 REMARK 2 REMARK 2 RESOLUTION. 2.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 92.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 90.0 REMARK 3 NUMBER OF REFLECTIONS : 84379 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.212 REMARK 3 R VALUE (WORKING SET) : 0.211 REMARK 3 FREE R VALUE : 0.257 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 1.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1373 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.07 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3288 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.2710 REMARK 3 BIN FREE R VALUE SET COUNT : 53 REMARK 3 BIN FREE R VALUE : 0.2920 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6612 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 533 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 27.31 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.84000 REMARK 3 B22 (A**2) : -0.54000 REMARK 3 B33 (A**2) : -1.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -1.32000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.163 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.161 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.155 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 11.275 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6762 ; 0.037 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): 4728 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9132 ; 2.643 ; 1.967 REMARK 3 BOND ANGLES OTHERS (DEGREES): 11514 ; 1.332 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 822 ; 8.634 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 282 ;31.484 ;23.404 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1230 ;19.706 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 42 ;20.745 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1002 ; 0.166 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 7350 ; 0.011 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 1386 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 1060 ; 0.236 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): 4659 ; 0.222 ; 0.200 REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 3035 ; 0.195 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): 4100 ; 0.107 ; 0.200 REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 388 ; 0.224 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 14 ; 0.218 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): 79 ; 0.255 ; 0.200 REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 31 ; 0.187 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5084 ; 2.030 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 6660 ; 2.387 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3194 ; 4.261 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 2471 ; 5.659 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 6 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 65 A 202 REMARK 3 ORIGIN FOR THE GROUP (A): 15.7501 -0.5035 42.6974 REMARK 3 T TENSOR REMARK 3 T11: -0.0125 T22: 0.0013 REMARK 3 T33: -0.0553 T12: -0.0062 REMARK 3 T13: 0.0109 T23: -0.0177 REMARK 3 L TENSOR REMARK 3 L11: 0.1081 L22: 0.9924 REMARK 3 L33: 1.2514 L12: 0.1225 REMARK 3 L13: 0.2980 L23: 0.5310 REMARK 3 S TENSOR REMARK 3 S11: 0.0177 S12: 0.0380 S13: -0.0852 REMARK 3 S21: -0.0009 S22: -0.0303 S23: -0.1002 REMARK 3 S31: -0.1685 S32: -0.0117 S33: 0.0126 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 65 B 202 REMARK 3 ORIGIN FOR THE GROUP (A): 21.9633 37.5525 11.6993 REMARK 3 T TENSOR REMARK 3 T11: -0.0587 T22: 0.0115 REMARK 3 T33: -0.0210 T12: -0.0209 REMARK 3 T13: -0.0065 T23: -0.0101 REMARK 3 L TENSOR REMARK 3 L11: 1.0660 L22: 0.5694 REMARK 3 L33: 0.6505 L12: 0.3518 REMARK 3 L13: 0.6616 L23: -0.0557 REMARK 3 S TENSOR REMARK 3 S11: 0.0370 S12: -0.0420 S13: -0.1117 REMARK 3 S21: 0.0726 S22: -0.0519 S23: -0.0390 REMARK 3 S31: -0.1138 S32: -0.0818 S33: 0.0149 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 65 C 202 REMARK 3 ORIGIN FOR THE GROUP (A): 44.0791 26.4023 -11.4523 REMARK 3 T TENSOR REMARK 3 T11: -0.0247 T22: -0.0287 REMARK 3 T33: -0.0043 T12: -0.0163 REMARK 3 T13: 0.0142 T23: 0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.4381 L22: 1.2814 REMARK 3 L33: 0.4351 L12: 0.2798 REMARK 3 L13: 0.1304 L23: -0.5248 REMARK 3 S TENSOR REMARK 3 S11: 0.1001 S12: 0.0138 S13: -0.0754 REMARK 3 S21: 0.0064 S22: -0.0933 S23: -0.1055 REMARK 3 S31: -0.0182 S32: 0.0282 S33: -0.0067 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 65 D 202 REMARK 3 ORIGIN FOR THE GROUP (A): 49.2024 43.3645 35.9402 REMARK 3 T TENSOR REMARK 3 T11: -0.0522 T22: 0.0149 REMARK 3 T33: -0.0343 T12: -0.0101 REMARK 3 T13: -0.0408 T23: 0.0226 REMARK 3 L TENSOR REMARK 3 L11: 1.4149 L22: 0.4566 REMARK 3 L33: 0.3822 L12: 0.2224 REMARK 3 L13: 0.1667 L23: 0.3172 REMARK 3 S TENSOR REMARK 3 S11: 0.0724 S12: -0.0587 S13: -0.1006 REMARK 3 S21: -0.0791 S22: -0.0204 S23: 0.0255 REMARK 3 S31: 0.0204 S32: -0.0044 S33: -0.0520 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 65 E 202 REMARK 3 ORIGIN FOR THE GROUP (A): 44.2883 -7.3163 3.9475 REMARK 3 T TENSOR REMARK 3 T11: -0.0192 T22: -0.0407 REMARK 3 T33: -0.0028 T12: 0.0012 REMARK 3 T13: -0.0095 T23: 0.0467 REMARK 3 L TENSOR REMARK 3 L11: 0.3187 L22: 1.0565 REMARK 3 L33: 0.8663 L12: 0.4043 REMARK 3 L13: -0.4062 L23: -0.1963 REMARK 3 S TENSOR REMARK 3 S11: -0.0294 S12: -0.0439 S13: -0.0172 REMARK 3 S21: -0.0144 S22: -0.0778 S23: -0.0464 REMARK 3 S31: -0.1044 S32: 0.0315 S33: 0.1072 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 65 F 202 REMARK 3 ORIGIN FOR THE GROUP (A): 23.1986 27.4233 -26.5277 REMARK 3 T TENSOR REMARK 3 T11: 0.0163 T22: -0.0408 REMARK 3 T33: -0.0365 T12: -0.0116 REMARK 3 T13: 0.0072 T23: -0.0288 REMARK 3 L TENSOR REMARK 3 L11: 0.7074 L22: 0.4382 REMARK 3 L33: 0.9592 L12: -0.2208 REMARK 3 L13: -0.1427 L23: 0.4859 REMARK 3 S TENSOR REMARK 3 S11: 0.0600 S12: -0.0077 S13: -0.0115 REMARK 3 S21: -0.1154 S22: 0.0000 S23: 0.0220 REMARK 3 S31: -0.0523 S32: -0.0025 S33: -0.0599 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2JHV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 23-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1290031601. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUN-06 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 6.50 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-ID REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.00 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 87249 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.100 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 94.4 REMARK 200 DATA REDUNDANCY : 3.300 REMARK 200 R MERGE (I) : 0.11000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 10.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.18 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 3.10 REMARK 200 R MERGE FOR SHELL (I) : 0.39000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 2BXW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72.38 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.45 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.0 M AMMONIUM SULFATE 0.2 M SODIUM REMARK 280 CHLORIDE 0.1 M SODIUM CACODYLATE PH 6.5, PH 6.50 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 65.84350 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 65.44450 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 65.84350 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 65.44450 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3, 4, 5, 6 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 4 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 5 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: E REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 6 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: F REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A2035 LIES ON A SPECIAL POSITION. REMARK 375 HOH D2023 LIES ON A SPECIAL POSITION. REMARK 375 HOH D2027 LIES ON A SPECIAL POSITION. REMARK 400 REMARK 400 COMPOUND REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 153 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN A, GLU 154 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, GLU 153 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN B, GLU 154 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN C, GLU 153 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN C, GLU 154 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN D, GLU 153 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN D, GLU 154 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN E, GLU 153 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN E, GLU 154 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN F, GLU 153 TO ALA REMARK 400 ENGINEERED RESIDUE IN CHAIN F, GLU 154 TO ALA REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH B 2005 O HOH B 2050 1.39 REMARK 500 O HOH F 2028 O HOH F 2029 1.83 REMARK 500 N ALA E 65 O HOH E 2001 1.84 REMARK 500 NE ARG F 120 O HOH F 2035 1.87 REMARK 500 O HOH D 2028 O HOH D 2029 1.94 REMARK 500 O HOH E 2024 O HOH E 2027 2.02 REMARK 500 O ALA F 65 O HOH F 2001 2.03 REMARK 500 NH2 ARG F 120 O HOH F 2035 2.03 REMARK 500 O VAL E 67 NH2 ARG E 120 2.07 REMARK 500 O VAL D 67 NH2 ARG D 120 2.08 REMARK 500 O HOH C 2066 O HOH C 2086 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 CE MET F 66 O HOH E 2080 4555 1.83 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLU A 87 CG GLU A 87 CD 0.102 REMARK 500 GLU A 95 CG GLU A 95 CD 0.092 REMARK 500 VAL A 108 CB VAL A 108 CG1 -0.128 REMARK 500 LYS A 138 CE LYS A 138 NZ 0.196 REMARK 500 ARG A 180 CG ARG A 180 CD 0.159 REMARK 500 ALA B 65 CA ALA B 65 CB 0.173 REMARK 500 GLU B 87 CG GLU B 87 CD 0.120 REMARK 500 LYS B 138 CE LYS B 138 NZ 0.184 REMARK 500 TYR B 144 CD1 TYR B 144 CE1 0.104 REMARK 500 TYR B 149 CB TYR B 149 CG -0.102 REMARK 500 ARG B 180 CZ ARG B 180 NH1 0.078 REMARK 500 VAL C 71 CB VAL C 71 CG2 0.140 REMARK 500 GLU C 87 CG GLU C 87 CD 0.132 REMARK 500 GLU C 95 CG GLU C 95 CD 0.109 REMARK 500 LYS C 138 CD LYS C 138 CE 0.150 REMARK 500 LYS C 138 CE LYS C 138 NZ 0.226 REMARK 500 LYS C 141 CD LYS C 141 CE 0.179 REMARK 500 LYS C 141 CE LYS C 141 NZ 0.163 REMARK 500 GLU C 163 CG GLU C 163 CD 0.128 REMARK 500 ARG C 180 CZ ARG C 180 NH1 0.085 REMARK 500 GLU C 193 CD GLU C 193 OE1 0.068 REMARK 500 MET D 66 CB MET D 66 CG 0.334 REMARK 500 MET D 66 CG MET D 66 SD 0.303 REMARK 500 VAL D 71 CB VAL D 71 CG2 0.137 REMARK 500 GLU D 95 CG GLU D 95 CD 0.101 REMARK 500 VAL D 108 CB VAL D 108 CG1 0.128 REMARK 500 ARG D 117 CG ARG D 117 CD 0.211 REMARK 500 VAL D 162 CB VAL D 162 CG2 -0.141 REMARK 500 GLU D 163 CG GLU D 163 CD 0.163 REMARK 500 GLU D 163 CD GLU D 163 OE1 0.074 REMARK 500 SER D 179 CB SER D 179 OG -0.089 REMARK 500 GLU D 193 CB GLU D 193 CG 0.181 REMARK 500 GLU D 193 CD GLU D 193 OE2 0.076 REMARK 500 MET E 66 CB MET E 66 CG 0.346 REMARK 500 MET E 66 CG MET E 66 SD 0.274 REMARK 500 GLU E 95 CG GLU E 95 CD 0.096 REMARK 500 VAL E 123 CB VAL E 123 CG2 -0.129 REMARK 500 SER E 124 CB SER E 124 OG -0.092 REMARK 500 TYR E 128 CD1 TYR E 128 CE1 -0.105 REMARK 500 MET E 145 CG MET E 145 SD 0.160 REMARK 500 ALA E 155 CA ALA E 155 CB 0.135 REMARK 500 VAL E 162 CB VAL E 162 CG2 -0.137 REMARK 500 GLU E 163 CG GLU E 163 CD 0.106 REMARK 500 GLU E 163 CD GLU E 163 OE1 0.070 REMARK 500 GLU E 163 CD GLU E 163 OE2 0.096 REMARK 500 GLU E 164 CG GLU E 164 CD 0.104 REMARK 500 MET F 66 CB MET F 66 CG 0.280 REMARK 500 MET F 66 CG MET F 66 SD 0.264 REMARK 500 ARG F 117 CG ARG F 117 CD 0.246 REMARK 500 VAL F 123 CB VAL F 123 CG1 -0.248 REMARK 500 REMARK 500 THIS ENTRY HAS 52 BOND DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 LEU A 88 CA - CB - CG ANGL. DEV. = 15.1 DEGREES REMARK 500 ARG A 120 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 ARG A 172 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ARG A 180 NE - CZ - NH1 ANGL. DEV. = 6.7 DEGREES REMARK 500 ARG A 180 NE - CZ - NH2 ANGL. DEV. = -6.1 DEGREES REMARK 500 ASP A 183 CB - CG - OD2 ANGL. DEV. = 5.4 DEGREES REMARK 500 ASP B 89 CB - CG - OD2 ANGL. DEV. = 5.7 DEGREES REMARK 500 LEU B 94 CA - CB - CG ANGL. DEV. = 15.4 DEGREES REMARK 500 MET B 169 CG - SD - CE ANGL. DEV. = 12.4 DEGREES REMARK 500 ARG B 180 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG B 180 NE - CZ - NH2 ANGL. DEV. = -6.4 DEGREES REMARK 500 ASP B 184 CB - CG - OD1 ANGL. DEV. = -8.6 DEGREES REMARK 500 MET C 66 CB - CG - SD ANGL. DEV. = -21.0 DEGREES REMARK 500 MET C 66 CG - SD - CE ANGL. DEV. = 10.3 DEGREES REMARK 500 LYS C 141 CD - CE - NZ ANGL. DEV. = 17.6 DEGREES REMARK 500 MET C 169 CG - SD - CE ANGL. DEV. = 9.9 DEGREES REMARK 500 ARG C 180 NE - CZ - NH1 ANGL. DEV. = 4.7 DEGREES REMARK 500 ARG C 180 NE - CZ - NH2 ANGL. DEV. = -6.3 DEGREES REMARK 500 ASP C 184 CB - CG - OD1 ANGL. DEV. = -5.4 DEGREES REMARK 500 MET D 66 CA - CB - CG ANGL. DEV. = 12.2 DEGREES REMARK 500 MET D 66 CB - CG - SD ANGL. DEV. = 35.2 DEGREES REMARK 500 MET D 66 CG - SD - CE ANGL. DEV. = 13.7 DEGREES REMARK 500 ARG D 120 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG D 120 NE - CZ - NH2 ANGL. DEV. = -3.8 DEGREES REMARK 500 ARG D 134 NE - CZ - NH2 ANGL. DEV. = -3.7 DEGREES REMARK 500 ARG D 172 NE - CZ - NH1 ANGL. DEV. = 4.1 DEGREES REMARK 500 ARG D 172 NE - CZ - NH2 ANGL. DEV. = -5.3 DEGREES REMARK 500 ARG D 180 NE - CZ - NH1 ANGL. DEV. = 4.6 DEGREES REMARK 500 ARG D 180 NE - CZ - NH2 ANGL. DEV. = -3.1 DEGREES REMARK 500 ALA E 65 N - CA - C ANGL. DEV. = -24.5 DEGREES REMARK 500 MET E 66 CA - CB - CG ANGL. DEV. = 11.9 DEGREES REMARK 500 MET E 66 CB - CG - SD ANGL. DEV. = 29.8 DEGREES REMARK 500 MET E 66 CG - SD - CE ANGL. DEV. = 13.9 DEGREES REMARK 500 ARG E 120 NE - CZ - NH1 ANGL. DEV. = 4.0 DEGREES REMARK 500 ARG E 120 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG E 172 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG E 180 NE - CZ - NH1 ANGL. DEV. = 5.2 DEGREES REMARK 500 ARG E 180 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 ASP E 184 CB - CG - OD1 ANGL. DEV. = -6.1 DEGREES REMARK 500 MET F 66 CA - CB - CG ANGL. DEV. = 11.9 DEGREES REMARK 500 MET F 66 CB - CG - SD ANGL. DEV. = 30.8 DEGREES REMARK 500 ARG F 117 CG - CD - NE ANGL. DEV. = -21.3 DEGREES REMARK 500 ARG F 117 NE - CZ - NH2 ANGL. DEV. = -4.2 DEGREES REMARK 500 ARG F 172 NE - CZ - NH2 ANGL. DEV. = -3.6 DEGREES REMARK 500 ARG F 180 NE - CZ - NH1 ANGL. DEV. = 7.3 DEGREES REMARK 500 ARG F 180 NE - CZ - NH2 ANGL. DEV. = -4.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 120 -44.37 -140.23 REMARK 500 MET B 66 -0.17 -52.54 REMARK 500 ARG B 120 -42.78 -138.12 REMARK 500 MET C 66 -7.38 -40.36 REMARK 500 ARG C 120 -45.65 -139.75 REMARK 500 ARG D 120 -34.62 -137.18 REMARK 500 ARG E 120 -36.32 -131.63 REMARK 500 LEU F 190 149.61 -174.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ALA B 65 MET B 66 -30.17 REMARK 500 MET B 66 VAL B 67 146.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 700 REMARK 700 SHEET REMARK 700 THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN REMARK 700 ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, REMARK 700 TWO SHEETS ARE DEFINED. REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1CC0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE RHOA.GDP-RHOGDI COMPLEX REMARK 900 RELATED ID: 1FSO RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TRUNCATED HUMAN RHOGDI QUADRUPLE MUTANT REMARK 900 RELATED ID: 1FST RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TRUNCATED HUMAN RHOGDI TRIPLE MUTANT REMARK 900 RELATED ID: 1FT0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TRUNCATED HUMAN RHOGDI K113A MUTANT REMARK 900 RELATED ID: 1FT3 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF TRUNCATED RHOGDI K141A MUTANT REMARK 900 RELATED ID: 1HH4 RELATED DB: PDB REMARK 900 RAC1-RHOGDI COMPLEX INVOLVED IN NADPH OXIDASE ACTIVATION REMARK 900 RELATED ID: 1KMT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RHOGDI GLU(154,155) ALA MUTANT REMARK 900 RELATED ID: 1QVY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RHOGDI K(199,200)R DOUBLE MUTANT REMARK 900 RELATED ID: 1RHO RELATED DB: PDB REMARK 900 STRUCTURE OF RHO GUANINE NUCLEOTIDE DISSOCIATION INHIBITOR REMARK 900 RELATED ID: 2BXW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RHOGDI LYS(135,138, 141)TYR MUTANT REMARK 900 RELATED ID: 2JHS RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RHOGDI K135H,K138H, K141H MUTANT REMARK 900 RELATED ID: 2JHT RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RHOGDI K135T,K138T, K141T MUTANT REMARK 900 RELATED ID: 2JHU RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RHOGDI E154A,E155A MUTANT REMARK 900 RELATED ID: 2JHW RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RHOGDI E155A, E157A MUTANT REMARK 900 RELATED ID: 2JHX RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RHOGDI E155H, E157H MUTANT REMARK 900 RELATED ID: 2JHY RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RHOGDI E155H, E157H MUTANT REMARK 900 RELATED ID: 2JHZ RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RHOGDI E155S, E157S MUTANT REMARK 900 RELATED ID: 2JI0 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RHOGDI K138Y, K141Y MUTANT REMARK 999 REMARK 999 SEQUENCE REMARK 999 MUTATIONS ENGINEERED TO FACILITATE CRYSTALLIZATION DBREF 2JHV A 65 66 PDB 2JHV 2JHV 65 66 DBREF 2JHV A 67 202 UNP P52565 GDIR_HUMAN 66 201 DBREF 2JHV B 65 66 PDB 2JHV 2JHV 65 66 DBREF 2JHV B 67 202 UNP P52565 GDIR_HUMAN 66 201 DBREF 2JHV C 65 66 PDB 2JHV 2JHV 65 66 DBREF 2JHV C 67 202 UNP P52565 GDIR_HUMAN 66 201 DBREF 2JHV D 65 66 PDB 2JHV 2JHV 65 66 DBREF 2JHV D 67 202 UNP P52565 GDIR_HUMAN 66 201 DBREF 2JHV E 65 66 PDB 2JHV 2JHV 65 66 DBREF 2JHV E 67 202 UNP P52565 GDIR_HUMAN 66 201 DBREF 2JHV F 65 66 PDB 2JHV 2JHV 65 66 DBREF 2JHV F 67 202 UNP P52565 GDIR_HUMAN 66 201 SEQADV 2JHV ALA A 154 UNP P52565 GLU 153 ENGINEERED MUTATION SEQADV 2JHV ALA A 155 UNP P52565 GLU 154 ENGINEERED MUTATION SEQADV 2JHV ALA B 154 UNP P52565 GLU 153 ENGINEERED MUTATION SEQADV 2JHV ALA B 155 UNP P52565 GLU 154 ENGINEERED MUTATION SEQADV 2JHV ALA C 154 UNP P52565 GLU 153 ENGINEERED MUTATION SEQADV 2JHV ALA C 155 UNP P52565 GLU 154 ENGINEERED MUTATION SEQADV 2JHV ALA D 154 UNP P52565 GLU 153 ENGINEERED MUTATION SEQADV 2JHV ALA D 155 UNP P52565 GLU 154 ENGINEERED MUTATION SEQADV 2JHV ALA E 154 UNP P52565 GLU 153 ENGINEERED MUTATION SEQADV 2JHV ALA E 155 UNP P52565 GLU 154 ENGINEERED MUTATION SEQADV 2JHV ALA F 154 UNP P52565 GLU 153 ENGINEERED MUTATION SEQADV 2JHV ALA F 155 UNP P52565 GLU 154 ENGINEERED MUTATION SEQRES 1 A 138 ALA MET VAL PRO ASN VAL VAL VAL THR GLY LEU THR LEU SEQRES 2 A 138 VAL CYS SER SER ALA PRO GLY PRO LEU GLU LEU ASP LEU SEQRES 3 A 138 THR GLY ASP LEU GLU SER PHE LYS LYS GLN SER PHE VAL SEQRES 4 A 138 LEU LYS GLU GLY VAL GLU TYR ARG ILE LYS ILE SER PHE SEQRES 5 A 138 ARG VAL ASN ARG GLU ILE VAL SER GLY MET LYS TYR ILE SEQRES 6 A 138 GLN HIS THR TYR ARG LYS GLY VAL LYS ILE ASP LYS THR SEQRES 7 A 138 ASP TYR MET VAL GLY SER TYR GLY PRO ARG ALA ALA ALA SEQRES 8 A 138 TYR GLU PHE LEU THR PRO VAL GLU GLU ALA PRO LYS GLY SEQRES 9 A 138 MET LEU ALA ARG GLY SER TYR SER ILE LYS SER ARG PHE SEQRES 10 A 138 THR ASP ASP ASP LYS THR ASP HIS LEU SER TRP GLU TRP SEQRES 11 A 138 ASN LEU THR ILE LYS LYS ASP TRP SEQRES 1 B 138 ALA MET VAL PRO ASN VAL VAL VAL THR GLY LEU THR LEU SEQRES 2 B 138 VAL CYS SER SER ALA PRO GLY PRO LEU GLU LEU ASP LEU SEQRES 3 B 138 THR GLY ASP LEU GLU SER PHE LYS LYS GLN SER PHE VAL SEQRES 4 B 138 LEU LYS GLU GLY VAL GLU TYR ARG ILE LYS ILE SER PHE SEQRES 5 B 138 ARG VAL ASN ARG GLU ILE VAL SER GLY MET LYS TYR ILE SEQRES 6 B 138 GLN HIS THR TYR ARG LYS GLY VAL LYS ILE ASP LYS THR SEQRES 7 B 138 ASP TYR MET VAL GLY SER TYR GLY PRO ARG ALA ALA ALA SEQRES 8 B 138 TYR GLU PHE LEU THR PRO VAL GLU GLU ALA PRO LYS GLY SEQRES 9 B 138 MET LEU ALA ARG GLY SER TYR SER ILE LYS SER ARG PHE SEQRES 10 B 138 THR ASP ASP ASP LYS THR ASP HIS LEU SER TRP GLU TRP SEQRES 11 B 138 ASN LEU THR ILE LYS LYS ASP TRP SEQRES 1 C 138 ALA MET VAL PRO ASN VAL VAL VAL THR GLY LEU THR LEU SEQRES 2 C 138 VAL CYS SER SER ALA PRO GLY PRO LEU GLU LEU ASP LEU SEQRES 3 C 138 THR GLY ASP LEU GLU SER PHE LYS LYS GLN SER PHE VAL SEQRES 4 C 138 LEU LYS GLU GLY VAL GLU TYR ARG ILE LYS ILE SER PHE SEQRES 5 C 138 ARG VAL ASN ARG GLU ILE VAL SER GLY MET LYS TYR ILE SEQRES 6 C 138 GLN HIS THR TYR ARG LYS GLY VAL LYS ILE ASP LYS THR SEQRES 7 C 138 ASP TYR MET VAL GLY SER TYR GLY PRO ARG ALA ALA ALA SEQRES 8 C 138 TYR GLU PHE LEU THR PRO VAL GLU GLU ALA PRO LYS GLY SEQRES 9 C 138 MET LEU ALA ARG GLY SER TYR SER ILE LYS SER ARG PHE SEQRES 10 C 138 THR ASP ASP ASP LYS THR ASP HIS LEU SER TRP GLU TRP SEQRES 11 C 138 ASN LEU THR ILE LYS LYS ASP TRP SEQRES 1 D 138 ALA MET VAL PRO ASN VAL VAL VAL THR GLY LEU THR LEU SEQRES 2 D 138 VAL CYS SER SER ALA PRO GLY PRO LEU GLU LEU ASP LEU SEQRES 3 D 138 THR GLY ASP LEU GLU SER PHE LYS LYS GLN SER PHE VAL SEQRES 4 D 138 LEU LYS GLU GLY VAL GLU TYR ARG ILE LYS ILE SER PHE SEQRES 5 D 138 ARG VAL ASN ARG GLU ILE VAL SER GLY MET LYS TYR ILE SEQRES 6 D 138 GLN HIS THR TYR ARG LYS GLY VAL LYS ILE ASP LYS THR SEQRES 7 D 138 ASP TYR MET VAL GLY SER TYR GLY PRO ARG ALA ALA ALA SEQRES 8 D 138 TYR GLU PHE LEU THR PRO VAL GLU GLU ALA PRO LYS GLY SEQRES 9 D 138 MET LEU ALA ARG GLY SER TYR SER ILE LYS SER ARG PHE SEQRES 10 D 138 THR ASP ASP ASP LYS THR ASP HIS LEU SER TRP GLU TRP SEQRES 11 D 138 ASN LEU THR ILE LYS LYS ASP TRP SEQRES 1 E 138 ALA MET VAL PRO ASN VAL VAL VAL THR GLY LEU THR LEU SEQRES 2 E 138 VAL CYS SER SER ALA PRO GLY PRO LEU GLU LEU ASP LEU SEQRES 3 E 138 THR GLY ASP LEU GLU SER PHE LYS LYS GLN SER PHE VAL SEQRES 4 E 138 LEU LYS GLU GLY VAL GLU TYR ARG ILE LYS ILE SER PHE SEQRES 5 E 138 ARG VAL ASN ARG GLU ILE VAL SER GLY MET LYS TYR ILE SEQRES 6 E 138 GLN HIS THR TYR ARG LYS GLY VAL LYS ILE ASP LYS THR SEQRES 7 E 138 ASP TYR MET VAL GLY SER TYR GLY PRO ARG ALA ALA ALA SEQRES 8 E 138 TYR GLU PHE LEU THR PRO VAL GLU GLU ALA PRO LYS GLY SEQRES 9 E 138 MET LEU ALA ARG GLY SER TYR SER ILE LYS SER ARG PHE SEQRES 10 E 138 THR ASP ASP ASP LYS THR ASP HIS LEU SER TRP GLU TRP SEQRES 11 E 138 ASN LEU THR ILE LYS LYS ASP TRP SEQRES 1 F 138 ALA MET VAL PRO ASN VAL VAL VAL THR GLY LEU THR LEU SEQRES 2 F 138 VAL CYS SER SER ALA PRO GLY PRO LEU GLU LEU ASP LEU SEQRES 3 F 138 THR GLY ASP LEU GLU SER PHE LYS LYS GLN SER PHE VAL SEQRES 4 F 138 LEU LYS GLU GLY VAL GLU TYR ARG ILE LYS ILE SER PHE SEQRES 5 F 138 ARG VAL ASN ARG GLU ILE VAL SER GLY MET LYS TYR ILE SEQRES 6 F 138 GLN HIS THR TYR ARG LYS GLY VAL LYS ILE ASP LYS THR SEQRES 7 F 138 ASP TYR MET VAL GLY SER TYR GLY PRO ARG ALA ALA ALA SEQRES 8 F 138 TYR GLU PHE LEU THR PRO VAL GLU GLU ALA PRO LYS GLY SEQRES 9 F 138 MET LEU ALA ARG GLY SER TYR SER ILE LYS SER ARG PHE SEQRES 10 F 138 THR ASP ASP ASP LYS THR ASP HIS LEU SER TRP GLU TRP SEQRES 11 F 138 ASN LEU THR ILE LYS LYS ASP TRP FORMUL 7 HOH *533(H2 O) HELIX 1 1 ASP A 93 GLN A 100 5 8 HELIX 2 2 GLY A 168 ARG A 172 5 5 HELIX 3 3 ASP B 93 GLN B 100 5 8 HELIX 4 4 ASP C 93 GLN C 100 5 8 HELIX 5 5 GLY C 168 ARG C 172 5 5 HELIX 6 6 GLU D 95 GLN D 100 5 6 HELIX 7 7 GLU E 95 GLN E 100 5 6 HELIX 8 8 ASP F 93 LYS F 99 5 7 SHEET 1 AA 4 GLU A 87 ASP A 89 0 SHEET 2 AA 4 VAL A 70 VAL A 78 -1 O LEU A 75 N LEU A 88 SHEET 3 AA 4 GLU A 109 VAL A 118 -1 O ARG A 111 N VAL A 78 SHEET 4 AA 4 GLU A 163 GLU A 164 -1 O GLU A 163 N TYR A 110 SHEET 1 AB 4 GLU A 87 ASP A 89 0 SHEET 2 AB 4 VAL A 70 VAL A 78 -1 O LEU A 75 N LEU A 88 SHEET 3 AB 4 GLU A 109 VAL A 118 -1 O ARG A 111 N VAL A 78 SHEET 4 AB 4 TYR A 156 LEU A 159 -1 O TYR A 156 N PHE A 116 SHEET 1 AC 5 PHE A 102 LYS A 105 0 SHEET 2 AC 5 LEU A 190 LYS A 199 1 O ASN A 195 N PHE A 102 SHEET 3 AC 5 GLY A 173 THR A 182 -1 O GLY A 173 N ILE A 198 SHEET 4 AC 5 VAL A 123 ARG A 134 -1 O LYS A 127 N THR A 182 SHEET 5 AC 5 VAL A 137 TYR A 149 -1 O VAL A 137 N ARG A 134 SHEET 1 BA 4 GLU B 87 ASP B 89 0 SHEET 2 BA 4 VAL B 70 VAL B 78 -1 O LEU B 75 N LEU B 88 SHEET 3 BA 4 GLU B 109 VAL B 118 -1 O ARG B 111 N VAL B 78 SHEET 4 BA 4 GLU B 163 GLU B 164 -1 O GLU B 163 N TYR B 110 SHEET 1 BB 4 GLU B 87 ASP B 89 0 SHEET 2 BB 4 VAL B 70 VAL B 78 -1 O LEU B 75 N LEU B 88 SHEET 3 BB 4 GLU B 109 VAL B 118 -1 O ARG B 111 N VAL B 78 SHEET 4 BB 4 TYR B 156 LEU B 159 -1 O TYR B 156 N PHE B 116 SHEET 1 BC 5 PHE B 102 LYS B 105 0 SHEET 2 BC 5 LEU B 190 LYS B 199 1 O ASN B 195 N PHE B 102 SHEET 3 BC 5 GLY B 173 THR B 182 -1 O GLY B 173 N ILE B 198 SHEET 4 BC 5 VAL B 123 ARG B 134 -1 O LYS B 127 N THR B 182 SHEET 5 BC 5 VAL B 137 TYR B 149 -1 O VAL B 137 N ARG B 134 SHEET 1 CA 4 GLU C 87 ASP C 89 0 SHEET 2 CA 4 VAL C 70 VAL C 78 -1 O LEU C 75 N LEU C 88 SHEET 3 CA 4 GLU C 109 VAL C 118 -1 O ARG C 111 N VAL C 78 SHEET 4 CA 4 GLU C 163 GLU C 164 -1 O GLU C 163 N TYR C 110 SHEET 1 CB 4 GLU C 87 ASP C 89 0 SHEET 2 CB 4 VAL C 70 VAL C 78 -1 O LEU C 75 N LEU C 88 SHEET 3 CB 4 GLU C 109 VAL C 118 -1 O ARG C 111 N VAL C 78 SHEET 4 CB 4 TYR C 156 LEU C 159 -1 O TYR C 156 N PHE C 116 SHEET 1 CC 5 PHE C 102 LYS C 105 0 SHEET 2 CC 5 LEU C 190 LYS C 199 1 O ASN C 195 N PHE C 102 SHEET 3 CC 5 GLY C 173 THR C 182 -1 O GLY C 173 N ILE C 198 SHEET 4 CC 5 VAL C 123 ARG C 134 -1 O LYS C 127 N THR C 182 SHEET 5 CC 5 VAL C 137 TYR C 149 -1 O VAL C 137 N ARG C 134 SHEET 1 DA 7 GLU D 87 ASP D 89 0 SHEET 2 DA 7 VAL D 70 VAL D 78 -1 O LEU D 75 N LEU D 88 SHEET 3 DA 7 GLU D 109 VAL D 118 -1 O ARG D 111 N VAL D 78 SHEET 4 DA 7 TYR D 156 LEU D 159 -1 O TYR D 156 N PHE D 116 SHEET 5 DA 7 GLU D 109 VAL D 118 -1 O ILE D 114 N PHE D 158 SHEET 6 DA 7 GLU D 163 GLU D 164 -1 O GLU D 163 N TYR D 110 SHEET 7 DA 7 GLU D 109 VAL D 118 -1 O TYR D 110 N GLU D 163 SHEET 1 DB 5 PHE D 102 LYS D 105 0 SHEET 2 DB 5 LEU D 190 LYS D 199 1 O ASN D 195 N PHE D 102 SHEET 3 DB 5 GLY D 173 THR D 182 -1 O GLY D 173 N ILE D 198 SHEET 4 DB 5 VAL D 123 ARG D 134 -1 O LYS D 127 N THR D 182 SHEET 5 DB 5 VAL D 137 TYR D 149 -1 O VAL D 137 N ARG D 134 SHEET 1 EA 7 GLU E 87 ASP E 89 0 SHEET 2 EA 7 VAL E 70 VAL E 78 -1 O LEU E 75 N LEU E 88 SHEET 3 EA 7 GLU E 109 VAL E 118 -1 O ARG E 111 N VAL E 78 SHEET 4 EA 7 TYR E 156 LEU E 159 -1 O TYR E 156 N PHE E 116 SHEET 5 EA 7 GLU E 109 VAL E 118 -1 O ILE E 114 N PHE E 158 SHEET 6 EA 7 GLU E 163 GLU E 164 -1 O GLU E 163 N TYR E 110 SHEET 7 EA 7 GLU E 109 VAL E 118 -1 O TYR E 110 N GLU E 163 SHEET 1 EB 5 PHE E 102 LYS E 105 0 SHEET 2 EB 5 LEU E 190 LYS E 199 1 O ASN E 195 N PHE E 102 SHEET 3 EB 5 GLY E 173 THR E 182 -1 O GLY E 173 N ILE E 198 SHEET 4 EB 5 VAL E 123 ARG E 134 -1 O LYS E 127 N THR E 182 SHEET 5 EB 5 VAL E 137 TYR E 149 -1 O VAL E 137 N ARG E 134 SHEET 1 FA 7 GLU F 87 ASP F 89 0 SHEET 2 FA 7 VAL F 70 VAL F 78 -1 O LEU F 75 N LEU F 88 SHEET 3 FA 7 GLU F 109 VAL F 118 -1 O ARG F 111 N VAL F 78 SHEET 4 FA 7 TYR F 156 LEU F 159 -1 O TYR F 156 N PHE F 116 SHEET 5 FA 7 GLU F 109 VAL F 118 -1 O ILE F 114 N PHE F 158 SHEET 6 FA 7 GLU F 163 GLU F 164 -1 O GLU F 163 N TYR F 110 SHEET 7 FA 7 GLU F 109 VAL F 118 -1 O TYR F 110 N GLU F 163 SHEET 1 FB 5 PHE F 102 LYS F 105 0 SHEET 2 FB 5 LEU F 190 LYS F 199 1 O ASN F 195 N PHE F 102 SHEET 3 FB 5 GLY F 173 THR F 182 -1 O GLY F 173 N ILE F 198 SHEET 4 FB 5 VAL F 123 ARG F 134 -1 O LYS F 127 N THR F 182 SHEET 5 FB 5 VAL F 137 TYR F 149 -1 O VAL F 137 N ARG F 134 CISPEP 1 ALA A 65 MET A 66 0 -3.91 CISPEP 2 ALA C 65 MET C 66 0 -29.97 CISPEP 3 ALA D 65 MET D 66 0 0.51 CISPEP 4 ALA E 65 MET E 66 0 -18.70 CISPEP 5 ALA F 65 MET F 66 0 4.20 CRYST1 131.687 130.889 92.822 90.00 90.94 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007594 0.000000 0.000125 0.00000 SCALE2 0.000000 0.007640 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010775 0.00000