data_2JIN # _entry.id 2JIN # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2JIN PDBE EBI-33056 WWPDB D_1290033056 # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 2JIK _pdbx_database_related.content_type unspecified _pdbx_database_related.details 'CRYSTAL STRUCTURE OF PDZ DOMAIN OF SYNAPTOJANIN-2 BINDING PROTEIN' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2JIN _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2007-06-28 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf ? _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tickle, J.' 1 'Phillips, C.' 2 'Pike, A.C.W.' 3 'Cooper, C.' 4 'Salah, E.' 5 'Elkins, J.' 6 'Turnbull, A.P.' 7 'Edwards, A.' 8 'Arrowsmith, C.H.' 9 'Weigelt, J.' 10 'Sundstrom, M.' 11 'Doyle, D.' 12 # _citation.id primary _citation.title 'Crystal Structure of Pdz Domain of Synaptojanin-2 Binding Protein' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Tickle, J.' 1 primary 'Phillips, C.' 2 primary 'Pike, A.C.W.' 3 primary 'Cooper, C.' 4 primary 'Salah, E.' 5 primary 'Elkins, J.' 6 primary 'Turnbull, A.P.' 7 primary 'Edwards, A.' 8 primary 'Arrowsmith, C.H.' 9 primary 'Weigelt, J.' 10 primary 'Sundstrom, M.' 11 primary 'Doyle, D.' 12 # _cell.entry_id 2JIN _cell.length_a 65.993 _cell.length_b 65.993 _cell.length_c 41.384 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2JIN _symmetry.space_group_name_H-M 'I 4' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 79 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SYNAPTOJANIN-2 BINDING PROTEIN' 11177.340 1 ? ? 'PDZ DOMAIN, RESIDUES 4-99' ? 2 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 4 water nat water 18.015 119 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'MITOCHONDRIAL OUTER MEMBRANE PROTEIN 25' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDA VDLFRNAGYAVSLRVQHRESSI ; _entity_poly.pdbx_seq_one_letter_code_can ;SMRVDYLVTEEEINLTRGPSGLGFNIVGGTDQQYVSNDSGIYVSRIKENGAAALDGRLQEGDKILSVNGQDLKNLLHQDA VDLFRNAGYAVSLRVQHRESSI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ARG n 1 4 VAL n 1 5 ASP n 1 6 TYR n 1 7 LEU n 1 8 VAL n 1 9 THR n 1 10 GLU n 1 11 GLU n 1 12 GLU n 1 13 ILE n 1 14 ASN n 1 15 LEU n 1 16 THR n 1 17 ARG n 1 18 GLY n 1 19 PRO n 1 20 SER n 1 21 GLY n 1 22 LEU n 1 23 GLY n 1 24 PHE n 1 25 ASN n 1 26 ILE n 1 27 VAL n 1 28 GLY n 1 29 GLY n 1 30 THR n 1 31 ASP n 1 32 GLN n 1 33 GLN n 1 34 TYR n 1 35 VAL n 1 36 SER n 1 37 ASN n 1 38 ASP n 1 39 SER n 1 40 GLY n 1 41 ILE n 1 42 TYR n 1 43 VAL n 1 44 SER n 1 45 ARG n 1 46 ILE n 1 47 LYS n 1 48 GLU n 1 49 ASN n 1 50 GLY n 1 51 ALA n 1 52 ALA n 1 53 ALA n 1 54 LEU n 1 55 ASP n 1 56 GLY n 1 57 ARG n 1 58 LEU n 1 59 GLN n 1 60 GLU n 1 61 GLY n 1 62 ASP n 1 63 LYS n 1 64 ILE n 1 65 LEU n 1 66 SER n 1 67 VAL n 1 68 ASN n 1 69 GLY n 1 70 GLN n 1 71 ASP n 1 72 LEU n 1 73 LYS n 1 74 ASN n 1 75 LEU n 1 76 LEU n 1 77 HIS n 1 78 GLN n 1 79 ASP n 1 80 ALA n 1 81 VAL n 1 82 ASP n 1 83 LEU n 1 84 PHE n 1 85 ARG n 1 86 ASN n 1 87 ALA n 1 88 GLY n 1 89 TYR n 1 90 ALA n 1 91 VAL n 1 92 SER n 1 93 LEU n 1 94 ARG n 1 95 VAL n 1 96 GLN n 1 97 HIS n 1 98 ARG n 1 99 GLU n 1 100 SER n 1 101 SER n 1 102 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HUMAN _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'HOMO SAPIENS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant R3-PRARE2 _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PNIC28-BSA4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2JIN 1 ? ? 2JIN ? 2 UNP SYJ2B_HUMAN 1 ? ? P57105 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2JIN A 1 ? 2 ? 2JIN -1 ? 0 ? -1 0 2 2 2JIN A 3 ? 98 ? P57105 4 ? 99 ? 4 99 3 1 2JIN A 99 ? 102 ? 2JIN 100 ? 103 ? 100 103 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2JIN _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.02 _exptl_crystal.density_percent_sol 39.23 _exptl_crystal.description ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method ? _exptl_crystal_grow.temp ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.50 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '30% PEG10K, 0.20M LITHIUM SULPHATE, 0.1M ACETATE PH 4.5' # _diffrn.id 1 _diffrn.ambient_temp 100.0 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type MARRESEARCH _diffrn_detector.pdbx_collection_date 2007-04-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.03315 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X10SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X10SA _diffrn_source.pdbx_wavelength 1.03315 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2JIN _reflns.observed_criterion_sigma_I 0.000 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 46.680 _reflns.d_resolution_high 1.500 _reflns.number_obs 14288 _reflns.number_all ? _reflns.percent_possible_obs 99.7 _reflns.pdbx_Rmerge_I_obs 0.08000 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 12.6000 _reflns.B_iso_Wilson_estimate 14.38 _reflns.pdbx_redundancy 4.500 # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.58 _reflns_shell.percent_possible_all 97.6 _reflns_shell.Rmerge_I_obs 0.52000 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.100 _reflns_shell.pdbx_redundancy 2.60 # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2JIN _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 13546 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 46.68 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 99.5 _refine.ls_R_factor_obs 0.169 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.166 _refine.ls_R_factor_R_free 0.220 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 716 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.967 _refine.correlation_coeff_Fo_to_Fc_free 0.941 _refine.B_iso_mean 15.86 _refine.aniso_B[1][1] 0.05000 _refine.aniso_B[2][2] 0.05000 _refine.aniso_B[3][3] -0.09000 _refine.aniso_B[1][2] 0.00000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model 'PDB ENTRY 2FE5' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.080 _refine.pdbx_overall_ESU_R_Free 0.090 _refine.overall_SU_ML 0.059 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 3.107 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 780 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 6 _refine_hist.number_atoms_solvent 119 _refine_hist.number_atoms_total 905 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 46.68 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.013 0.021 ? 856 'X-RAY DIFFRACTION' ? r_bond_other_d 0.002 0.020 ? 567 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.418 1.960 ? 1160 'X-RAY DIFFRACTION' ? r_angle_other_deg 2.029 3.000 ? 1394 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 5.880 5.000 ? 107 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 32.904 25.417 ? 48 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 11.427 15.000 ? 157 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 13.291 15.000 ? 7 'X-RAY DIFFRACTION' ? r_chiral_restr 0.083 0.200 ? 132 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.006 0.020 ? 972 'X-RAY DIFFRACTION' ? r_gen_planes_other 0.002 0.020 ? 163 'X-RAY DIFFRACTION' ? r_nbd_refined 0.249 0.200 ? 156 'X-RAY DIFFRACTION' ? r_nbd_other 0.214 0.200 ? 620 'X-RAY DIFFRACTION' ? r_nbtor_refined 0.168 0.200 ? 417 'X-RAY DIFFRACTION' ? r_nbtor_other 0.095 0.200 ? 477 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined 0.135 0.200 ? 87 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined 0.226 0.200 ? 18 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other 0.307 0.200 ? 63 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined 0.202 0.200 ? 30 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 2.424 3.000 ? 525 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 3.605 5.000 ? 852 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 5.800 8.000 ? 335 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 8.120 11.000 ? 307 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.50 _refine_ls_shell.d_res_low 1.54 _refine_ls_shell.number_reflns_R_work 928 _refine_ls_shell.R_factor_R_work 0.2350 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3150 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 44 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? # _struct.entry_id 2JIN _struct.title 'Crystal structure of PDZ domain of Synaptojanin-2 binding protein' _struct.pdbx_descriptor 'SYNAPTOJANIN-2 BINDING PROTEIN' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2JIN _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text 'TRANSMEMBRANE, OUTER MEMBRANE, MITOCHONDRIA DISTRIBUTION, PDZ, MEMBRANE, SCAFFOLD, MITOCHONDRION, MEMBRANE PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # _struct_biol.id 1 # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLY A 50 ? GLY A 56 ? GLY A 51 GLY A 57 1 ? 7 HELX_P HELX_P2 2 LEU A 76 ? ALA A 87 ? LEU A 77 ALA A 88 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 5 ? AB ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AB 1 2 ? anti-parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 GLU A 10 ? THR A 16 ? GLU A 11 THR A 17 AA 2 ALA A 90 ? GLN A 96 ? ALA A 91 GLN A 97 AA 3 LYS A 63 ? VAL A 67 ? LYS A 64 VAL A 68 AA 4 ILE A 41 ? ILE A 46 ? ILE A 42 ILE A 47 AA 5 PHE A 24 ? GLY A 28 ? PHE A 25 GLY A 29 AB 1 GLU A 10 ? THR A 16 ? GLU A 11 THR A 17 AB 2 ALA A 90 ? GLN A 96 ? ALA A 91 GLN A 97 AB 3 LYS A 63 ? VAL A 67 ? LYS A 64 VAL A 68 AB 4 GLN A 70 ? ASP A 71 ? GLN A 71 ASP A 72 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N LEU A 15 ? N LEU A 16 O VAL A 91 ? O VAL A 92 AA 2 3 N GLN A 96 ? N GLN A 97 O LYS A 63 ? O LYS A 64 AA 3 4 N ILE A 64 ? N ILE A 65 O ILE A 41 ? O ILE A 42 AA 4 5 N SER A 44 ? N SER A 45 O ASN A 25 ? O ASN A 26 AB 1 2 N LEU A 15 ? N LEU A 16 O VAL A 91 ? O VAL A 92 AB 2 3 N GLN A 96 ? N GLN A 97 O LYS A 63 ? O LYS A 64 AB 3 4 N VAL A 67 ? N VAL A 68 O GLN A 70 ? O GLN A 71 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE NA A1103' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE SO4 A1104' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 6 GLY A 23 ? GLY A 24 . ? 1_555 ? 2 AC1 6 LYS A 47 ? LYS A 48 . ? 1_555 ? 3 AC1 6 GLY A 50 ? GLY A 51 . ? 1_555 ? 4 AC1 6 ALA A 51 ? ALA A 52 . ? 1_555 ? 5 AC1 6 ALA A 52 ? ALA A 53 . ? 1_555 ? 6 AC1 6 ALA A 53 ? ALA A 54 . ? 1_555 ? 7 AC2 5 ARG A 45 ? ARG A 46 . ? 1_555 ? 8 AC2 5 LYS A 47 ? LYS A 48 . ? 1_555 ? 9 AC2 5 GLU A 48 ? GLU A 49 . ? 1_555 ? 10 AC2 5 HOH D . ? HOH A 2055 . ? 1_555 ? 11 AC2 5 HOH D . ? HOH A 2119 . ? 1_555 ? # _database_PDB_matrix.entry_id 2JIN _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2JIN _atom_sites.fract_transf_matrix[1][1] 0.015153 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.015153 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.024164 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N NA O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -1 -1 SER SER A . n A 1 2 MET 2 0 0 MET MET A . n A 1 3 ARG 3 4 4 ARG ARG A . n A 1 4 VAL 4 5 5 VAL VAL A . n A 1 5 ASP 5 6 6 ASP ASP A . n A 1 6 TYR 6 7 7 TYR TYR A . n A 1 7 LEU 7 8 8 LEU LEU A . n A 1 8 VAL 8 9 9 VAL VAL A . n A 1 9 THR 9 10 10 THR THR A . n A 1 10 GLU 10 11 11 GLU GLU A . n A 1 11 GLU 11 12 12 GLU GLU A . n A 1 12 GLU 12 13 13 GLU GLU A . n A 1 13 ILE 13 14 14 ILE ILE A . n A 1 14 ASN 14 15 15 ASN ASN A . n A 1 15 LEU 15 16 16 LEU LEU A . n A 1 16 THR 16 17 17 THR THR A . n A 1 17 ARG 17 18 18 ARG ARG A . n A 1 18 GLY 18 19 19 GLY GLY A . n A 1 19 PRO 19 20 20 PRO PRO A . n A 1 20 SER 20 21 21 SER SER A . n A 1 21 GLY 21 22 22 GLY GLY A . n A 1 22 LEU 22 23 23 LEU LEU A . n A 1 23 GLY 23 24 24 GLY GLY A . n A 1 24 PHE 24 25 25 PHE PHE A . n A 1 25 ASN 25 26 26 ASN ASN A . n A 1 26 ILE 26 27 27 ILE ILE A . n A 1 27 VAL 27 28 28 VAL VAL A . n A 1 28 GLY 28 29 29 GLY GLY A . n A 1 29 GLY 29 30 30 GLY GLY A . n A 1 30 THR 30 31 31 THR THR A . n A 1 31 ASP 31 32 32 ASP ASP A . n A 1 32 GLN 32 33 33 GLN GLN A . n A 1 33 GLN 33 34 34 GLN GLN A . n A 1 34 TYR 34 35 35 TYR TYR A . n A 1 35 VAL 35 36 36 VAL VAL A . n A 1 36 SER 36 37 37 SER SER A . n A 1 37 ASN 37 38 38 ASN ASN A . n A 1 38 ASP 38 39 39 ASP ASP A . n A 1 39 SER 39 40 40 SER SER A . n A 1 40 GLY 40 41 41 GLY GLY A . n A 1 41 ILE 41 42 42 ILE ILE A . n A 1 42 TYR 42 43 43 TYR TYR A . n A 1 43 VAL 43 44 44 VAL VAL A . n A 1 44 SER 44 45 45 SER SER A . n A 1 45 ARG 45 46 46 ARG ARG A . n A 1 46 ILE 46 47 47 ILE ILE A . n A 1 47 LYS 47 48 48 LYS LYS A . n A 1 48 GLU 48 49 49 GLU GLU A . n A 1 49 ASN 49 50 50 ASN ASN A . n A 1 50 GLY 50 51 51 GLY GLY A . n A 1 51 ALA 51 52 52 ALA ALA A . n A 1 52 ALA 52 53 53 ALA ALA A . n A 1 53 ALA 53 54 54 ALA ALA A . n A 1 54 LEU 54 55 55 LEU LEU A . n A 1 55 ASP 55 56 56 ASP ASP A . n A 1 56 GLY 56 57 57 GLY GLY A . n A 1 57 ARG 57 58 58 ARG ARG A . n A 1 58 LEU 58 59 59 LEU LEU A . n A 1 59 GLN 59 60 60 GLN GLN A . n A 1 60 GLU 60 61 61 GLU GLU A . n A 1 61 GLY 61 62 62 GLY GLY A . n A 1 62 ASP 62 63 63 ASP ASP A . n A 1 63 LYS 63 64 64 LYS LYS A . n A 1 64 ILE 64 65 65 ILE ILE A . n A 1 65 LEU 65 66 66 LEU LEU A . n A 1 66 SER 66 67 67 SER SER A . n A 1 67 VAL 67 68 68 VAL VAL A . n A 1 68 ASN 68 69 69 ASN ASN A . n A 1 69 GLY 69 70 70 GLY GLY A . n A 1 70 GLN 70 71 71 GLN GLN A . n A 1 71 ASP 71 72 72 ASP ASP A . n A 1 72 LEU 72 73 73 LEU LEU A . n A 1 73 LYS 73 74 74 LYS LYS A . n A 1 74 ASN 74 75 75 ASN ASN A . n A 1 75 LEU 75 76 76 LEU LEU A . n A 1 76 LEU 76 77 77 LEU LEU A . n A 1 77 HIS 77 78 78 HIS HIS A . n A 1 78 GLN 78 79 79 GLN GLN A . n A 1 79 ASP 79 80 80 ASP ASP A . n A 1 80 ALA 80 81 81 ALA ALA A . n A 1 81 VAL 81 82 82 VAL VAL A . n A 1 82 ASP 82 83 83 ASP ASP A . n A 1 83 LEU 83 84 84 LEU LEU A . n A 1 84 PHE 84 85 85 PHE PHE A . n A 1 85 ARG 85 86 86 ARG ARG A . n A 1 86 ASN 86 87 87 ASN ASN A . n A 1 87 ALA 87 88 88 ALA ALA A . n A 1 88 GLY 88 89 89 GLY GLY A . n A 1 89 TYR 89 90 90 TYR TYR A . n A 1 90 ALA 90 91 91 ALA ALA A . n A 1 91 VAL 91 92 92 VAL VAL A . n A 1 92 SER 92 93 93 SER SER A . n A 1 93 LEU 93 94 94 LEU LEU A . n A 1 94 ARG 94 95 95 ARG ARG A . n A 1 95 VAL 95 96 96 VAL VAL A . n A 1 96 GLN 96 97 97 GLN GLN A . n A 1 97 HIS 97 98 98 HIS HIS A . n A 1 98 ARG 98 99 99 ARG ARG A . n A 1 99 GLU 99 100 100 GLU GLU A . n A 1 100 SER 100 101 101 SER SER A . n A 1 101 SER 101 102 102 SER SER A . n A 1 102 ILE 102 103 103 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 NA 1 1103 1103 NA NA A . C 3 SO4 1 1104 1104 SO4 SO4 A . D 4 HOH 1 2001 2001 HOH HOH A . D 4 HOH 2 2002 2002 HOH HOH A . D 4 HOH 3 2003 2003 HOH HOH A . D 4 HOH 4 2004 2004 HOH HOH A . D 4 HOH 5 2005 2005 HOH HOH A . D 4 HOH 6 2006 2006 HOH HOH A . D 4 HOH 7 2007 2007 HOH HOH A . D 4 HOH 8 2008 2008 HOH HOH A . D 4 HOH 9 2009 2009 HOH HOH A . D 4 HOH 10 2010 2010 HOH HOH A . D 4 HOH 11 2011 2011 HOH HOH A . D 4 HOH 12 2012 2012 HOH HOH A . D 4 HOH 13 2013 2013 HOH HOH A . D 4 HOH 14 2014 2014 HOH HOH A . D 4 HOH 15 2015 2015 HOH HOH A . D 4 HOH 16 2016 2016 HOH HOH A . D 4 HOH 17 2017 2017 HOH HOH A . D 4 HOH 18 2018 2018 HOH HOH A . D 4 HOH 19 2019 2019 HOH HOH A . D 4 HOH 20 2020 2020 HOH HOH A . D 4 HOH 21 2021 2021 HOH HOH A . D 4 HOH 22 2022 2022 HOH HOH A . D 4 HOH 23 2023 2023 HOH HOH A . D 4 HOH 24 2024 2024 HOH HOH A . D 4 HOH 25 2025 2025 HOH HOH A . D 4 HOH 26 2026 2026 HOH HOH A . D 4 HOH 27 2027 2027 HOH HOH A . D 4 HOH 28 2028 2028 HOH HOH A . D 4 HOH 29 2029 2029 HOH HOH A . D 4 HOH 30 2030 2030 HOH HOH A . D 4 HOH 31 2031 2031 HOH HOH A . D 4 HOH 32 2032 2032 HOH HOH A . D 4 HOH 33 2033 2033 HOH HOH A . D 4 HOH 34 2034 2034 HOH HOH A . D 4 HOH 35 2035 2035 HOH HOH A . D 4 HOH 36 2036 2036 HOH HOH A . D 4 HOH 37 2037 2037 HOH HOH A . D 4 HOH 38 2038 2038 HOH HOH A . D 4 HOH 39 2039 2039 HOH HOH A . D 4 HOH 40 2040 2040 HOH HOH A . D 4 HOH 41 2041 2041 HOH HOH A . D 4 HOH 42 2042 2042 HOH HOH A . D 4 HOH 43 2043 2043 HOH HOH A . D 4 HOH 44 2044 2044 HOH HOH A . D 4 HOH 45 2045 2045 HOH HOH A . D 4 HOH 46 2046 2046 HOH HOH A . D 4 HOH 47 2047 2047 HOH HOH A . D 4 HOH 48 2048 2048 HOH HOH A . D 4 HOH 49 2049 2049 HOH HOH A . D 4 HOH 50 2050 2050 HOH HOH A . D 4 HOH 51 2051 2051 HOH HOH A . D 4 HOH 52 2052 2052 HOH HOH A . D 4 HOH 53 2053 2053 HOH HOH A . D 4 HOH 54 2054 2054 HOH HOH A . D 4 HOH 55 2055 2055 HOH HOH A . D 4 HOH 56 2056 2056 HOH HOH A . D 4 HOH 57 2057 2057 HOH HOH A . D 4 HOH 58 2058 2058 HOH HOH A . D 4 HOH 59 2059 2059 HOH HOH A . D 4 HOH 60 2060 2060 HOH HOH A . D 4 HOH 61 2061 2061 HOH HOH A . D 4 HOH 62 2062 2062 HOH HOH A . D 4 HOH 63 2063 2063 HOH HOH A . D 4 HOH 64 2064 2064 HOH HOH A . D 4 HOH 65 2065 2065 HOH HOH A . D 4 HOH 66 2066 2066 HOH HOH A . D 4 HOH 67 2067 2067 HOH HOH A . D 4 HOH 68 2068 2068 HOH HOH A . D 4 HOH 69 2069 2069 HOH HOH A . D 4 HOH 70 2070 2070 HOH HOH A . D 4 HOH 71 2071 2071 HOH HOH A . D 4 HOH 72 2072 2072 HOH HOH A . D 4 HOH 73 2073 2073 HOH HOH A . D 4 HOH 74 2074 2074 HOH HOH A . D 4 HOH 75 2075 2075 HOH HOH A . D 4 HOH 76 2076 2076 HOH HOH A . D 4 HOH 77 2077 2077 HOH HOH A . D 4 HOH 78 2078 2078 HOH HOH A . D 4 HOH 79 2079 2079 HOH HOH A . D 4 HOH 80 2080 2080 HOH HOH A . D 4 HOH 81 2081 2081 HOH HOH A . D 4 HOH 82 2082 2082 HOH HOH A . D 4 HOH 83 2083 2083 HOH HOH A . D 4 HOH 84 2084 2084 HOH HOH A . D 4 HOH 85 2085 2085 HOH HOH A . D 4 HOH 86 2086 2086 HOH HOH A . D 4 HOH 87 2087 2087 HOH HOH A . D 4 HOH 88 2088 2088 HOH HOH A . D 4 HOH 89 2089 2089 HOH HOH A . D 4 HOH 90 2090 2090 HOH HOH A . D 4 HOH 91 2091 2091 HOH HOH A . D 4 HOH 92 2092 2092 HOH HOH A . D 4 HOH 93 2093 2093 HOH HOH A . D 4 HOH 94 2094 2094 HOH HOH A . D 4 HOH 95 2095 2095 HOH HOH A . D 4 HOH 96 2096 2096 HOH HOH A . D 4 HOH 97 2097 2097 HOH HOH A . D 4 HOH 98 2098 2098 HOH HOH A . D 4 HOH 99 2099 2099 HOH HOH A . D 4 HOH 100 2100 2100 HOH HOH A . D 4 HOH 101 2101 2101 HOH HOH A . D 4 HOH 102 2102 2102 HOH HOH A . D 4 HOH 103 2103 2103 HOH HOH A . D 4 HOH 104 2104 2104 HOH HOH A . D 4 HOH 105 2105 2105 HOH HOH A . D 4 HOH 106 2106 2106 HOH HOH A . D 4 HOH 107 2107 2107 HOH HOH A . D 4 HOH 108 2108 2108 HOH HOH A . D 4 HOH 109 2109 2109 HOH HOH A . D 4 HOH 110 2110 2110 HOH HOH A . D 4 HOH 111 2111 2111 HOH HOH A . D 4 HOH 112 2112 2112 HOH HOH A . D 4 HOH 113 2113 2113 HOH HOH A . D 4 HOH 114 2114 2114 HOH HOH A . D 4 HOH 115 2115 2115 HOH HOH A . D 4 HOH 116 2116 2116 HOH HOH A . D 4 HOH 117 2117 2117 HOH HOH A . D 4 HOH 118 2118 2118 HOH HOH A . D 4 HOH 119 2119 2119 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PQS _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-07-10 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -18.6200 _pdbx_refine_tls.origin_y -8.4160 _pdbx_refine_tls.origin_z -22.4630 _pdbx_refine_tls.T[1][1] -0.1120 _pdbx_refine_tls.T[2][2] -0.1135 _pdbx_refine_tls.T[3][3] -0.1053 _pdbx_refine_tls.T[1][2] 0.0039 _pdbx_refine_tls.T[1][3] 0.0007 _pdbx_refine_tls.T[2][3] -0.0009 _pdbx_refine_tls.L[1][1] 0.9174 _pdbx_refine_tls.L[2][2] 1.1031 _pdbx_refine_tls.L[3][3] 1.3272 _pdbx_refine_tls.L[1][2] -0.4080 _pdbx_refine_tls.L[1][3] 0.3298 _pdbx_refine_tls.L[2][3] -0.1665 _pdbx_refine_tls.S[1][1] -0.0611 _pdbx_refine_tls.S[1][2] -0.0323 _pdbx_refine_tls.S[1][3] 0.0724 _pdbx_refine_tls.S[2][1] -0.0090 _pdbx_refine_tls.S[2][2] 0.0396 _pdbx_refine_tls.S[2][3] -0.0195 _pdbx_refine_tls.S[3][1] -0.0210 _pdbx_refine_tls.S[3][2] 0.0289 _pdbx_refine_tls.S[3][3] 0.0215 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 1 _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 100 _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal REFMAC refinement 5.3.0037 ? 1 MOSFLM 'data reduction' . ? 2 SCALA 'data scaling' . ? 3 PHASER phasing . ? 4 # _pdbx_database_remark.id 700 _pdbx_database_remark.text ; SHEET THE SHEET STRUCTURE OF THIS MOLECULE IS BIFURCATED. IN ORDER TO REPRESENT THIS FEATURE IN THE SHEET RECORDS BELOW, TWO SHEETS ARE DEFINED. ; # _pdbx_entry_details.entry_id 2JIN _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;CONSTRUCT INCLUDES A CARBOXY-TERMINAL TETRAPEPTIDE (ESSI) CORRESPONDING TO A MODE1 PDZ INTERACTION MOTIF ; # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 O _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 HOH _pdbx_validate_symm_contact.auth_seq_id_1 2058 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 HOH _pdbx_validate_symm_contact.auth_seq_id_2 2105 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_455 _pdbx_validate_symm_contact.dist 2.11 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A SER -1 ? OG ? A SER 1 OG 2 1 Y 1 A LYS 74 ? NZ ? A LYS 73 NZ 3 1 Y 1 A ARG 95 ? NE ? A ARG 94 NE 4 1 Y 1 A ARG 95 ? CZ ? A ARG 94 CZ 5 1 Y 1 A ARG 95 ? NH1 ? A ARG 94 NH1 6 1 Y 1 A ARG 95 ? NH2 ? A ARG 94 NH2 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SODIUM ION' NA 3 'SULFATE ION' SO4 4 water HOH #