data_2JKD # _entry.id 2JKD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.315 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2JKD PDBE EBI-37286 WWPDB D_1290037286 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 2JKD _pdbx_database_status.deposit_site PDBE _pdbx_database_status.process_site PDBE _pdbx_database_status.SG_entry . _pdbx_database_status.recvd_initial_deposition_date 2008-08-27 _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Brooks, M.A.' 1 'Dziembowski, A.' 2 'Quevillon-Cheruel, S.' 3 'Henriot, V.' 4 'Faux, C.' 5 'van Tilbeurgh, H.' 6 'Seraphin, B.' 7 # _citation.id primary _citation.title 'Structure of the Yeast Pml1 Splicing Factor and its Integration Into the Res Complex' _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 37 _citation.page_first 129 _citation.page_last ? _citation.year 2009 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19033360 _citation.pdbx_database_id_DOI 10.1093/NAR/GKN894 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Brooks, M.A.' 1 ? primary 'Dziembowski, A.' 2 ? primary 'Quevillon-Cheruel, S.' 3 ? primary 'Henriot, V.' 4 ? primary 'Faux, C.' 5 ? primary 'Van Tilbeurgh, H.' 6 ? primary 'Seraphin, B.' 7 ? # _cell.entry_id 2JKD _cell.length_a 85.720 _cell.length_b 85.720 _cell.length_c 97.840 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2JKD _symmetry.space_group_name_H-M 'P 32 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 154 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'PRE-MRNA LEAKAGE PROTEIN 1' 21543.215 2 ? ? 'FHA DOMAIN, RESIDUES 25-204' ? 2 non-polymer syn GLYCEROL 92.094 3 ? ? ? ? 3 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 4 water nat water 18.015 46 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name PML1 # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MYIDIMPDFSPSGLLELESNNKEGIALKHVEPQDAISPDNYMDMLGLEARDRTMYELVIYRKNDKDKGPWKRYDLNGRSC YLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNNVVIPGARYIELRSG DVLTLSEFEEDNDYELIFMNVHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MYIDIMPDFSPSGLLELESNNKEGIALKHVEPQDAISPDNYMDMLGLEARDRTMYELVIYRKNDKDKGPWKRYDLNGRSC YLVGRELGHSLDTDLDDRTEIVVADIGIPEETSSKQHCVIQFRNVRGILKCYVMDLDSSNGTCLNNVVIPGARYIELRSG DVLTLSEFEEDNDYELIFMNVHHHHHH ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 TYR n 1 3 ILE n 1 4 ASP n 1 5 ILE n 1 6 MET n 1 7 PRO n 1 8 ASP n 1 9 PHE n 1 10 SER n 1 11 PRO n 1 12 SER n 1 13 GLY n 1 14 LEU n 1 15 LEU n 1 16 GLU n 1 17 LEU n 1 18 GLU n 1 19 SER n 1 20 ASN n 1 21 ASN n 1 22 LYS n 1 23 GLU n 1 24 GLY n 1 25 ILE n 1 26 ALA n 1 27 LEU n 1 28 LYS n 1 29 HIS n 1 30 VAL n 1 31 GLU n 1 32 PRO n 1 33 GLN n 1 34 ASP n 1 35 ALA n 1 36 ILE n 1 37 SER n 1 38 PRO n 1 39 ASP n 1 40 ASN n 1 41 TYR n 1 42 MET n 1 43 ASP n 1 44 MET n 1 45 LEU n 1 46 GLY n 1 47 LEU n 1 48 GLU n 1 49 ALA n 1 50 ARG n 1 51 ASP n 1 52 ARG n 1 53 THR n 1 54 MET n 1 55 TYR n 1 56 GLU n 1 57 LEU n 1 58 VAL n 1 59 ILE n 1 60 TYR n 1 61 ARG n 1 62 LYS n 1 63 ASN n 1 64 ASP n 1 65 LYS n 1 66 ASP n 1 67 LYS n 1 68 GLY n 1 69 PRO n 1 70 TRP n 1 71 LYS n 1 72 ARG n 1 73 TYR n 1 74 ASP n 1 75 LEU n 1 76 ASN n 1 77 GLY n 1 78 ARG n 1 79 SER n 1 80 CYS n 1 81 TYR n 1 82 LEU n 1 83 VAL n 1 84 GLY n 1 85 ARG n 1 86 GLU n 1 87 LEU n 1 88 GLY n 1 89 HIS n 1 90 SER n 1 91 LEU n 1 92 ASP n 1 93 THR n 1 94 ASP n 1 95 LEU n 1 96 ASP n 1 97 ASP n 1 98 ARG n 1 99 THR n 1 100 GLU n 1 101 ILE n 1 102 VAL n 1 103 VAL n 1 104 ALA n 1 105 ASP n 1 106 ILE n 1 107 GLY n 1 108 ILE n 1 109 PRO n 1 110 GLU n 1 111 GLU n 1 112 THR n 1 113 SER n 1 114 SER n 1 115 LYS n 1 116 GLN n 1 117 HIS n 1 118 CYS n 1 119 VAL n 1 120 ILE n 1 121 GLN n 1 122 PHE n 1 123 ARG n 1 124 ASN n 1 125 VAL n 1 126 ARG n 1 127 GLY n 1 128 ILE n 1 129 LEU n 1 130 LYS n 1 131 CYS n 1 132 TYR n 1 133 VAL n 1 134 MET n 1 135 ASP n 1 136 LEU n 1 137 ASP n 1 138 SER n 1 139 SER n 1 140 ASN n 1 141 GLY n 1 142 THR n 1 143 CYS n 1 144 LEU n 1 145 ASN n 1 146 ASN n 1 147 VAL n 1 148 VAL n 1 149 ILE n 1 150 PRO n 1 151 GLY n 1 152 ALA n 1 153 ARG n 1 154 TYR n 1 155 ILE n 1 156 GLU n 1 157 LEU n 1 158 ARG n 1 159 SER n 1 160 GLY n 1 161 ASP n 1 162 VAL n 1 163 LEU n 1 164 THR n 1 165 LEU n 1 166 SER n 1 167 GLU n 1 168 PHE n 1 169 GLU n 1 170 GLU n 1 171 ASP n 1 172 ASN n 1 173 ASP n 1 174 TYR n 1 175 GLU n 1 176 LEU n 1 177 ILE n 1 178 PHE n 1 179 MET n 1 180 ASN n 1 181 VAL n 1 182 HIS n 1 183 HIS n 1 184 HIS n 1 185 HIS n 1 186 HIS n 1 187 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ;BAKER'S YEAST ; _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain S288C _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'SACCHAROMYCES CEREVISIAE' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 4932 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ROSETTA _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET9 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_accession _struct_ref.pdbx_db_isoform 1 PDB 2JKD 1 ? ? 2JKD ? 2 UNP PML1_YEAST 1 ? ? Q07930 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2JKD A 1 ? 1 ? 2JKD 24 ? 24 ? 24 24 2 2 2JKD A 2 ? 181 ? Q07930 25 ? 204 ? 25 204 3 1 2JKD A 182 ? 187 ? 2JKD 205 ? 210 ? 205 210 4 1 2JKD B 1 ? 1 ? 2JKD 24 ? 24 ? 24 24 5 2 2JKD B 2 ? 181 ? Q07930 25 ? 204 ? 25 204 6 1 2JKD B 182 ? 187 ? 2JKD 205 ? 210 ? 205 210 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 2JKD _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.04 _exptl_crystal.density_percent_sol 59.22 _exptl_crystal.description NONE _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1M TRIS-HCL, PH 8.5, 0.2 M LISO4 AND FROM 20 TO 30% PEG 4000' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 _diffrn.pdbx_serial_crystal_experiment ? # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC CCD' _diffrn_detector.pdbx_collection_date 2005-08-31 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'ESRF BEAMLINE ID14-4' _diffrn_source.pdbx_synchrotron_site ESRF _diffrn_source.pdbx_synchrotron_beamline ID14-4 _diffrn_source.pdbx_wavelength 0.979 _diffrn_source.pdbx_wavelength_list ? # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 2JKD _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 20.00 _reflns.d_resolution_high 2.50 _reflns.number_obs 14550 _reflns.number_all ? _reflns.percent_possible_obs 98.2 _reflns.pdbx_Rmerge_I_obs 0.038 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 19.80 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 2.94 _reflns.pdbx_CC_half ? _reflns.pdbx_Rpim_I_all ? _reflns.pdbx_Rrim_I_all ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 2.50 _reflns_shell.d_res_low 2.60 _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_obs 0.225 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.82 _reflns_shell.pdbx_redundancy 2.98 _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_CC_half ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_Rrim_I_all ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 2JKD _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag 'LIKELY RESIDUAL' _refine.ls_number_reflns_obs 13827 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 40.86 _refine.ls_d_res_high 2.50 _refine.ls_percent_reflns_obs 98.2 _refine.ls_R_factor_obs 0.217 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.215 _refine.ls_R_factor_R_free 0.262 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.000 _refine.ls_number_reflns_R_free 721 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.938 _refine.correlation_coeff_Fo_to_Fc_free 0.917 _refine.B_iso_mean 50.84 _refine.aniso_B[1][1] -1.06000 _refine.aniso_B[2][2] -1.06000 _refine.aniso_B[3][3] 1.59000 _refine.aniso_B[1][2] -0.53000 _refine.aniso_B[1][3] 0.00000 _refine.aniso_B[2][3] 0.00000 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS.' _refine.pdbx_starting_model NONE _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.426 _refine.pdbx_overall_ESU_R_Free 0.281 _refine.overall_SU_ML 0.191 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 17.602 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2364 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 28 _refine_hist.number_atoms_solvent 46 _refine_hist.number_atoms_total 2438 _refine_hist.d_res_high 2.50 _refine_hist.d_res_low 40.86 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.010 0.022 ? 2425 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.445 1.980 ? 3270 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 3.049 5.000 ? 291 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 26.919 24.355 ? 124 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 10.073 15.000 ? 432 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 12.942 15.000 ? 20 'X-RAY DIFFRACTION' ? r_chiral_restr 0.099 0.200 ? 356 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.021 ? 1834 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it 0.553 1.500 ? 1463 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it 1.065 2.000 ? 2364 'X-RAY DIFFRACTION' ? r_mcangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it 1.433 3.000 ? 962 'X-RAY DIFFRACTION' ? r_scbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it 2.371 4.500 ? 906 'X-RAY DIFFRACTION' ? r_scangle_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_long_range_B_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 10 _refine_ls_shell.d_res_high 2.50 _refine_ls_shell.d_res_low 2.63 _refine_ls_shell.number_reflns_R_work 1985 _refine_ls_shell.R_factor_R_work 0.3060 _refine_ls_shell.percent_reflns_obs ? _refine_ls_shell.R_factor_R_free 0.3230 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 105 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_obs ? _refine_ls_shell.number_reflns_obs ? # _struct_ncs_oper.id 1 _struct_ncs_oper.code given _struct_ncs_oper.details ? _struct_ncs_oper.matrix[1][1] -0.671000 _struct_ncs_oper.matrix[1][2] -0.741300 _struct_ncs_oper.matrix[1][3] 0.013800 _struct_ncs_oper.matrix[2][1] 0.741200 _struct_ncs_oper.matrix[2][2] -0.671100 _struct_ncs_oper.matrix[2][3] -0.012500 _struct_ncs_oper.matrix[3][1] 0.018500 _struct_ncs_oper.matrix[3][2] 0.001900 _struct_ncs_oper.matrix[3][3] 0.999800 _struct_ncs_oper.vector[1] 132.28270 _struct_ncs_oper.vector[2] 34.59300 _struct_ncs_oper.vector[3] -11.36030 # _struct.entry_id 2JKD _struct.title 'Structure of the yeast Pml1 splicing factor and its integration into the RES complex' _struct.pdbx_descriptor 'PRE-MRNA LEAKAGE PROTEIN 1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2JKD _struct_keywords.pdbx_keywords 'GENE REGULATION' _struct_keywords.text ;MRNA PROCESSING, PML1/SNU17/BUD13, PRE-MRNA SPLICING, SACCHAROMYCES CEREVISIAE, PHOSPHO-PEPTIDE RECOGNITION, RES, NUCLEUS, MRNA SPLICING, GENE REGULATION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 2 ? G N N 3 ? H N N 4 ? I N N 4 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 37 ? LEU A 45 ? SER A 60 LEU A 68 1 ? 9 HELX_P HELX_P2 2 GLU A 48 ? ARG A 52 ? GLU A 71 ARG A 75 5 ? 5 HELX_P HELX_P3 3 PHE A 168 ? ASN A 172 ? PHE A 191 ASN A 195 5 ? 5 HELX_P HELX_P4 4 SER B 37 ? LEU B 45 ? SER B 60 LEU B 68 1 ? 9 HELX_P HELX_P5 5 GLU B 48 ? ARG B 52 ? GLU B 71 ARG B 75 5 ? 5 HELX_P HELX_P6 6 ASP B 64 ? GLY B 68 ? ASP B 87 GLY B 91 5 ? 5 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details AA ? 6 ? AB ? 5 ? BA ? 6 ? BB ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense AA 1 2 ? anti-parallel AA 2 3 ? anti-parallel AA 3 4 ? anti-parallel AA 4 5 ? anti-parallel AA 5 6 ? anti-parallel AB 1 2 ? parallel AB 2 3 ? anti-parallel AB 3 4 ? anti-parallel AB 4 5 ? anti-parallel BA 1 2 ? anti-parallel BA 2 3 ? anti-parallel BA 3 4 ? anti-parallel BA 4 5 ? anti-parallel BA 5 6 ? anti-parallel BB 1 2 ? parallel BB 2 3 ? anti-parallel BB 3 4 ? anti-parallel BB 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id AA 1 LYS A 71 ? ASP A 74 ? LYS A 94 ASP A 97 AA 2 MET A 54 ? ARG A 61 ? MET A 77 ARG A 84 AA 3 TYR A 174 ? VAL A 181 ? TYR A 197 VAL A 204 AA 4 VAL A 162 ? THR A 164 ? VAL A 185 THR A 187 AA 5 CYS A 143 ? LEU A 144 ? CYS A 166 LEU A 167 AA 6 VAL A 147 ? VAL A 148 ? VAL A 170 VAL A 171 AB 1 ILE A 106 ? ILE A 108 ? ILE A 129 ILE A 131 AB 2 CYS A 80 ? ARG A 85 ? CYS A 103 ARG A 108 AB 3 CYS A 118 ? VAL A 125 ? CYS A 141 VAL A 148 AB 4 ILE A 128 ? ASP A 135 ? ILE A 151 ASP A 158 AB 5 ILE A 155 ? LEU A 157 ? ILE A 178 LEU A 180 BA 1 LYS B 71 ? ASP B 74 ? LYS B 94 ASP B 97 BA 2 MET B 54 ? ARG B 61 ? MET B 77 ARG B 84 BA 3 TYR B 174 ? VAL B 181 ? TYR B 197 VAL B 204 BA 4 VAL B 162 ? THR B 164 ? VAL B 185 THR B 187 BA 5 CYS B 143 ? LEU B 144 ? CYS B 166 LEU B 167 BA 6 VAL B 147 ? VAL B 148 ? VAL B 170 VAL B 171 BB 1 ILE B 106 ? ILE B 108 ? ILE B 129 ILE B 131 BB 2 CYS B 80 ? ARG B 85 ? CYS B 103 ARG B 108 BB 3 CYS B 118 ? VAL B 125 ? CYS B 141 VAL B 148 BB 4 ILE B 128 ? ASP B 135 ? ILE B 151 ASP B 158 BB 5 ILE B 155 ? GLU B 156 ? ILE B 178 GLU B 179 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id AA 1 2 N TYR A 73 ? N TYR A 96 O LEU A 57 ? O LEU A 80 AA 2 3 N TYR A 60 ? N TYR A 83 O GLU A 175 ? O GLU A 198 AA 3 4 N LEU A 176 ? N LEU A 199 O LEU A 163 ? O LEU A 186 AA 4 5 N THR A 164 ? N THR A 187 O CYS A 143 ? O CYS A 166 AA 5 6 N LEU A 144 ? N LEU A 167 O VAL A 147 ? O VAL A 170 AB 1 2 N ILE A 106 ? N ILE A 129 O LEU A 82 ? O LEU A 105 AB 2 3 N VAL A 83 ? N VAL A 106 O CYS A 118 ? O CYS A 141 AB 3 4 N VAL A 125 ? N VAL A 148 O ILE A 128 ? O ILE A 151 AB 4 5 N VAL A 133 ? N VAL A 156 O ILE A 155 ? O ILE A 178 BA 1 2 N TYR B 73 ? N TYR B 96 O LEU B 57 ? O LEU B 80 BA 2 3 N TYR B 60 ? N TYR B 83 O GLU B 175 ? O GLU B 198 BA 3 4 N LEU B 176 ? N LEU B 199 O LEU B 163 ? O LEU B 186 BA 4 5 N THR B 164 ? N THR B 187 O CYS B 143 ? O CYS B 166 BA 5 6 N LEU B 144 ? N LEU B 167 O VAL B 147 ? O VAL B 170 BB 1 2 N ILE B 106 ? N ILE B 129 O LEU B 82 ? O LEU B 105 BB 2 3 N VAL B 83 ? N VAL B 106 O CYS B 118 ? O CYS B 141 BB 3 4 N VAL B 125 ? N VAL B 148 O ILE B 128 ? O ILE B 151 BB 4 5 N VAL B 133 ? N VAL B 156 O ILE B 155 ? O ILE B 178 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE GOL A 301' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE GOL A 302' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE SO4 A 401' AC4 Software ? ? ? ? 8 'BINDING SITE FOR RESIDUE GOL B 301' AC5 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE SO4 B 401' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 SER A 159 ? SER A 182 . ? 1_555 ? 2 AC1 3 ASN A 180 ? ASN A 203 . ? 1_555 ? 3 AC1 3 HIS A 182 ? HIS A 205 . ? 1_555 ? 4 AC2 5 ALA A 35 ? ALA A 58 . ? 1_555 ? 5 AC2 5 ILE A 36 ? ILE A 59 . ? 1_555 ? 6 AC2 5 ASN A 124 ? ASN A 147 . ? 1_555 ? 7 AC2 5 LEU B 45 ? LEU B 68 . ? 1_555 ? 8 AC2 5 LEU B 47 ? LEU B 70 . ? 1_555 ? 9 AC3 3 ARG A 85 ? ARG A 108 . ? 1_555 ? 10 AC3 3 SER A 114 ? SER A 137 . ? 1_555 ? 11 AC3 3 LYS A 115 ? LYS A 138 . ? 1_555 ? 12 AC4 8 ILE A 128 ? ILE A 151 . ? 1_555 ? 13 AC4 8 TYR B 55 ? TYR B 78 . ? 1_555 ? 14 AC4 8 LEU B 129 ? LEU B 152 . ? 1_555 ? 15 AC4 8 CYS B 131 ? CYS B 154 . ? 1_555 ? 16 AC4 8 GLU B 156 ? GLU B 179 . ? 1_555 ? 17 AC4 8 LEU B 157 ? LEU B 180 . ? 1_555 ? 18 AC4 8 PHE B 178 ? PHE B 201 . ? 1_555 ? 19 AC4 8 ASN B 180 ? ASN B 203 . ? 1_555 ? 20 AC5 3 ARG B 85 ? ARG B 108 . ? 1_555 ? 21 AC5 3 SER B 114 ? SER B 137 . ? 1_555 ? 22 AC5 3 LYS B 115 ? LYS B 138 . ? 1_555 ? # _database_PDB_matrix.entry_id 2JKD _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 2JKD _atom_sites.fract_transf_matrix[1][1] 0.011666 _atom_sites.fract_transf_matrix[1][2] 0.006735 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013471 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010221 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 24 ? ? ? A . n A 1 2 TYR 2 25 ? ? ? A . n A 1 3 ILE 3 26 ? ? ? A . n A 1 4 ASP 4 27 ? ? ? A . n A 1 5 ILE 5 28 ? ? ? A . n A 1 6 MET 6 29 ? ? ? A . n A 1 7 PRO 7 30 ? ? ? A . n A 1 8 ASP 8 31 ? ? ? A . n A 1 9 PHE 9 32 ? ? ? A . n A 1 10 SER 10 33 ? ? ? A . n A 1 11 PRO 11 34 ? ? ? A . n A 1 12 SER 12 35 ? ? ? A . n A 1 13 GLY 13 36 ? ? ? A . n A 1 14 LEU 14 37 ? ? ? A . n A 1 15 LEU 15 38 ? ? ? A . n A 1 16 GLU 16 39 ? ? ? A . n A 1 17 LEU 17 40 ? ? ? A . n A 1 18 GLU 18 41 ? ? ? A . n A 1 19 SER 19 42 ? ? ? A . n A 1 20 ASN 20 43 ? ? ? A . n A 1 21 ASN 21 44 ? ? ? A . n A 1 22 LYS 22 45 ? ? ? A . n A 1 23 GLU 23 46 ? ? ? A . n A 1 24 GLY 24 47 ? ? ? A . n A 1 25 ILE 25 48 ? ? ? A . n A 1 26 ALA 26 49 49 ALA ALA A . n A 1 27 LEU 27 50 50 LEU LEU A . n A 1 28 LYS 28 51 51 LYS LYS A . n A 1 29 HIS 29 52 52 HIS HIS A . n A 1 30 VAL 30 53 53 VAL VAL A . n A 1 31 GLU 31 54 54 GLU GLU A . n A 1 32 PRO 32 55 55 PRO PRO A . n A 1 33 GLN 33 56 56 GLN GLN A . n A 1 34 ASP 34 57 57 ASP ASP A . n A 1 35 ALA 35 58 58 ALA ALA A . n A 1 36 ILE 36 59 59 ILE ILE A . n A 1 37 SER 37 60 60 SER SER A . n A 1 38 PRO 38 61 61 PRO PRO A . n A 1 39 ASP 39 62 62 ASP ASP A . n A 1 40 ASN 40 63 63 ASN ASN A . n A 1 41 TYR 41 64 64 TYR TYR A . n A 1 42 MET 42 65 65 MET MET A . n A 1 43 ASP 43 66 66 ASP ASP A . n A 1 44 MET 44 67 67 MET MET A . n A 1 45 LEU 45 68 68 LEU LEU A . n A 1 46 GLY 46 69 69 GLY GLY A . n A 1 47 LEU 47 70 70 LEU LEU A . n A 1 48 GLU 48 71 71 GLU GLU A . n A 1 49 ALA 49 72 72 ALA ALA A . n A 1 50 ARG 50 73 73 ARG ARG A . n A 1 51 ASP 51 74 74 ASP ASP A . n A 1 52 ARG 52 75 75 ARG ARG A . n A 1 53 THR 53 76 76 THR THR A . n A 1 54 MET 54 77 77 MET MET A . n A 1 55 TYR 55 78 78 TYR TYR A . n A 1 56 GLU 56 79 79 GLU GLU A . n A 1 57 LEU 57 80 80 LEU LEU A . n A 1 58 VAL 58 81 81 VAL VAL A . n A 1 59 ILE 59 82 82 ILE ILE A . n A 1 60 TYR 60 83 83 TYR TYR A . n A 1 61 ARG 61 84 84 ARG ARG A . n A 1 62 LYS 62 85 85 LYS LYS A . n A 1 63 ASN 63 86 86 ASN ASN A . n A 1 64 ASP 64 87 87 ASP ASP A . n A 1 65 LYS 65 88 88 LYS LYS A . n A 1 66 ASP 66 89 89 ASP ASP A . n A 1 67 LYS 67 90 90 LYS LYS A . n A 1 68 GLY 68 91 91 GLY GLY A . n A 1 69 PRO 69 92 92 PRO PRO A . n A 1 70 TRP 70 93 93 TRP TRP A . n A 1 71 LYS 71 94 94 LYS LYS A . n A 1 72 ARG 72 95 95 ARG ARG A . n A 1 73 TYR 73 96 96 TYR TYR A . n A 1 74 ASP 74 97 97 ASP ASP A . n A 1 75 LEU 75 98 98 LEU LEU A . n A 1 76 ASN 76 99 99 ASN ASN A . n A 1 77 GLY 77 100 100 GLY GLY A . n A 1 78 ARG 78 101 101 ARG ARG A . n A 1 79 SER 79 102 102 SER SER A . n A 1 80 CYS 80 103 103 CYS CYS A . n A 1 81 TYR 81 104 104 TYR TYR A . n A 1 82 LEU 82 105 105 LEU LEU A . n A 1 83 VAL 83 106 106 VAL VAL A . n A 1 84 GLY 84 107 107 GLY GLY A . n A 1 85 ARG 85 108 108 ARG ARG A . n A 1 86 GLU 86 109 109 GLU GLU A . n A 1 87 LEU 87 110 110 LEU LEU A . n A 1 88 GLY 88 111 111 GLY GLY A . n A 1 89 HIS 89 112 112 HIS HIS A . n A 1 90 SER 90 113 ? ? ? A . n A 1 91 LEU 91 114 ? ? ? A . n A 1 92 ASP 92 115 ? ? ? A . n A 1 93 THR 93 116 ? ? ? A . n A 1 94 ASP 94 117 ? ? ? A . n A 1 95 LEU 95 118 ? ? ? A . n A 1 96 ASP 96 119 ? ? ? A . n A 1 97 ASP 97 120 ? ? ? A . n A 1 98 ARG 98 121 ? ? ? A . n A 1 99 THR 99 122 122 THR THR A . n A 1 100 GLU 100 123 123 GLU GLU A . n A 1 101 ILE 101 124 124 ILE ILE A . n A 1 102 VAL 102 125 125 VAL VAL A . n A 1 103 VAL 103 126 126 VAL VAL A . n A 1 104 ALA 104 127 127 ALA ALA A . n A 1 105 ASP 105 128 128 ASP ASP A . n A 1 106 ILE 106 129 129 ILE ILE A . n A 1 107 GLY 107 130 130 GLY GLY A . n A 1 108 ILE 108 131 131 ILE ILE A . n A 1 109 PRO 109 132 132 PRO PRO A . n A 1 110 GLU 110 133 133 GLU GLU A . n A 1 111 GLU 111 134 134 GLU GLU A . n A 1 112 THR 112 135 135 THR THR A . n A 1 113 SER 113 136 136 SER SER A . n A 1 114 SER 114 137 137 SER SER A . n A 1 115 LYS 115 138 138 LYS LYS A . n A 1 116 GLN 116 139 139 GLN GLN A . n A 1 117 HIS 117 140 140 HIS HIS A . n A 1 118 CYS 118 141 141 CYS CYS A . n A 1 119 VAL 119 142 142 VAL VAL A . n A 1 120 ILE 120 143 143 ILE ILE A . n A 1 121 GLN 121 144 144 GLN GLN A . n A 1 122 PHE 122 145 145 PHE PHE A . n A 1 123 ARG 123 146 146 ARG ARG A . n A 1 124 ASN 124 147 147 ASN ASN A . n A 1 125 VAL 125 148 148 VAL VAL A . n A 1 126 ARG 126 149 149 ARG ARG A . n A 1 127 GLY 127 150 150 GLY GLY A . n A 1 128 ILE 128 151 151 ILE ILE A . n A 1 129 LEU 129 152 152 LEU LEU A . n A 1 130 LYS 130 153 153 LYS LYS A . n A 1 131 CYS 131 154 154 CYS CYS A . n A 1 132 TYR 132 155 155 TYR TYR A . n A 1 133 VAL 133 156 156 VAL VAL A . n A 1 134 MET 134 157 157 MET MET A . n A 1 135 ASP 135 158 158 ASP ASP A . n A 1 136 LEU 136 159 159 LEU LEU A . n A 1 137 ASP 137 160 160 ASP ASP A . n A 1 138 SER 138 161 161 SER SER A . n A 1 139 SER 139 162 162 SER SER A . n A 1 140 ASN 140 163 163 ASN ASN A . n A 1 141 GLY 141 164 164 GLY GLY A . n A 1 142 THR 142 165 165 THR THR A . n A 1 143 CYS 143 166 166 CYS CYS A . n A 1 144 LEU 144 167 167 LEU LEU A . n A 1 145 ASN 145 168 168 ASN ASN A . n A 1 146 ASN 146 169 169 ASN ASN A . n A 1 147 VAL 147 170 170 VAL VAL A . n A 1 148 VAL 148 171 171 VAL VAL A . n A 1 149 ILE 149 172 172 ILE ILE A . n A 1 150 PRO 150 173 173 PRO PRO A . n A 1 151 GLY 151 174 174 GLY GLY A . n A 1 152 ALA 152 175 175 ALA ALA A . n A 1 153 ARG 153 176 176 ARG ARG A . n A 1 154 TYR 154 177 177 TYR TYR A . n A 1 155 ILE 155 178 178 ILE ILE A . n A 1 156 GLU 156 179 179 GLU GLU A . n A 1 157 LEU 157 180 180 LEU LEU A . n A 1 158 ARG 158 181 181 ARG ARG A . n A 1 159 SER 159 182 182 SER SER A . n A 1 160 GLY 160 183 183 GLY GLY A . n A 1 161 ASP 161 184 184 ASP ASP A . n A 1 162 VAL 162 185 185 VAL VAL A . n A 1 163 LEU 163 186 186 LEU LEU A . n A 1 164 THR 164 187 187 THR THR A . n A 1 165 LEU 165 188 188 LEU LEU A . n A 1 166 SER 166 189 189 SER SER A . n A 1 167 GLU 167 190 190 GLU GLU A . n A 1 168 PHE 168 191 191 PHE PHE A . n A 1 169 GLU 169 192 192 GLU GLU A . n A 1 170 GLU 170 193 193 GLU GLU A . n A 1 171 ASP 171 194 194 ASP ASP A . n A 1 172 ASN 172 195 195 ASN ASN A . n A 1 173 ASP 173 196 196 ASP ASP A . n A 1 174 TYR 174 197 197 TYR TYR A . n A 1 175 GLU 175 198 198 GLU GLU A . n A 1 176 LEU 176 199 199 LEU LEU A . n A 1 177 ILE 177 200 200 ILE ILE A . n A 1 178 PHE 178 201 201 PHE PHE A . n A 1 179 MET 179 202 202 MET MET A . n A 1 180 ASN 180 203 203 ASN ASN A . n A 1 181 VAL 181 204 204 VAL VAL A . n A 1 182 HIS 182 205 205 HIS HIS A . n A 1 183 HIS 183 206 206 HIS HIS A . n A 1 184 HIS 184 207 207 HIS HIS A . n A 1 185 HIS 185 208 ? ? ? A . n A 1 186 HIS 186 209 ? ? ? A . n A 1 187 HIS 187 210 ? ? ? A . n B 1 1 MET 1 24 ? ? ? B . n B 1 2 TYR 2 25 ? ? ? B . n B 1 3 ILE 3 26 ? ? ? B . n B 1 4 ASP 4 27 ? ? ? B . n B 1 5 ILE 5 28 ? ? ? B . n B 1 6 MET 6 29 ? ? ? B . n B 1 7 PRO 7 30 ? ? ? B . n B 1 8 ASP 8 31 ? ? ? B . n B 1 9 PHE 9 32 ? ? ? B . n B 1 10 SER 10 33 ? ? ? B . n B 1 11 PRO 11 34 ? ? ? B . n B 1 12 SER 12 35 ? ? ? B . n B 1 13 GLY 13 36 ? ? ? B . n B 1 14 LEU 14 37 ? ? ? B . n B 1 15 LEU 15 38 ? ? ? B . n B 1 16 GLU 16 39 ? ? ? B . n B 1 17 LEU 17 40 ? ? ? B . n B 1 18 GLU 18 41 ? ? ? B . n B 1 19 SER 19 42 ? ? ? B . n B 1 20 ASN 20 43 ? ? ? B . n B 1 21 ASN 21 44 ? ? ? B . n B 1 22 LYS 22 45 ? ? ? B . n B 1 23 GLU 23 46 ? ? ? B . n B 1 24 GLY 24 47 ? ? ? B . n B 1 25 ILE 25 48 ? ? ? B . n B 1 26 ALA 26 49 ? ? ? B . n B 1 27 LEU 27 50 ? ? ? B . n B 1 28 LYS 28 51 51 LYS LYS B . n B 1 29 HIS 29 52 52 HIS HIS B . n B 1 30 VAL 30 53 53 VAL VAL B . n B 1 31 GLU 31 54 54 GLU GLU B . n B 1 32 PRO 32 55 55 PRO PRO B . n B 1 33 GLN 33 56 56 GLN GLN B . n B 1 34 ASP 34 57 57 ASP ASP B . n B 1 35 ALA 35 58 58 ALA ALA B . n B 1 36 ILE 36 59 59 ILE ILE B . n B 1 37 SER 37 60 60 SER SER B . n B 1 38 PRO 38 61 61 PRO PRO B . n B 1 39 ASP 39 62 62 ASP ASP B . n B 1 40 ASN 40 63 63 ASN ASN B . n B 1 41 TYR 41 64 64 TYR TYR B . n B 1 42 MET 42 65 65 MET MET B . n B 1 43 ASP 43 66 66 ASP ASP B . n B 1 44 MET 44 67 67 MET MET B . n B 1 45 LEU 45 68 68 LEU LEU B . n B 1 46 GLY 46 69 69 GLY GLY B . n B 1 47 LEU 47 70 70 LEU LEU B . n B 1 48 GLU 48 71 71 GLU GLU B . n B 1 49 ALA 49 72 72 ALA ALA B . n B 1 50 ARG 50 73 73 ARG ARG B . n B 1 51 ASP 51 74 74 ASP ASP B . n B 1 52 ARG 52 75 75 ARG ARG B . n B 1 53 THR 53 76 76 THR THR B . n B 1 54 MET 54 77 77 MET MET B . n B 1 55 TYR 55 78 78 TYR TYR B . n B 1 56 GLU 56 79 79 GLU GLU B . n B 1 57 LEU 57 80 80 LEU LEU B . n B 1 58 VAL 58 81 81 VAL VAL B . n B 1 59 ILE 59 82 82 ILE ILE B . n B 1 60 TYR 60 83 83 TYR TYR B . n B 1 61 ARG 61 84 84 ARG ARG B . n B 1 62 LYS 62 85 85 LYS LYS B . n B 1 63 ASN 63 86 86 ASN ASN B . n B 1 64 ASP 64 87 87 ASP ASP B . n B 1 65 LYS 65 88 88 LYS LYS B . n B 1 66 ASP 66 89 89 ASP ASP B . n B 1 67 LYS 67 90 90 LYS LYS B . n B 1 68 GLY 68 91 91 GLY GLY B . n B 1 69 PRO 69 92 92 PRO PRO B . n B 1 70 TRP 70 93 93 TRP TRP B . n B 1 71 LYS 71 94 94 LYS LYS B . n B 1 72 ARG 72 95 95 ARG ARG B . n B 1 73 TYR 73 96 96 TYR TYR B . n B 1 74 ASP 74 97 97 ASP ASP B . n B 1 75 LEU 75 98 98 LEU LEU B . n B 1 76 ASN 76 99 99 ASN ASN B . n B 1 77 GLY 77 100 100 GLY GLY B . n B 1 78 ARG 78 101 101 ARG ARG B . n B 1 79 SER 79 102 102 SER SER B . n B 1 80 CYS 80 103 103 CYS CYS B . n B 1 81 TYR 81 104 104 TYR TYR B . n B 1 82 LEU 82 105 105 LEU LEU B . n B 1 83 VAL 83 106 106 VAL VAL B . n B 1 84 GLY 84 107 107 GLY GLY B . n B 1 85 ARG 85 108 108 ARG ARG B . n B 1 86 GLU 86 109 109 GLU GLU B . n B 1 87 LEU 87 110 110 LEU LEU B . n B 1 88 GLY 88 111 111 GLY GLY B . n B 1 89 HIS 89 112 ? ? ? B . n B 1 90 SER 90 113 ? ? ? B . n B 1 91 LEU 91 114 ? ? ? B . n B 1 92 ASP 92 115 ? ? ? B . n B 1 93 THR 93 116 ? ? ? B . n B 1 94 ASP 94 117 ? ? ? B . n B 1 95 LEU 95 118 ? ? ? B . n B 1 96 ASP 96 119 ? ? ? B . n B 1 97 ASP 97 120 ? ? ? B . n B 1 98 ARG 98 121 ? ? ? B . n B 1 99 THR 99 122 122 THR THR B . n B 1 100 GLU 100 123 123 GLU GLU B . n B 1 101 ILE 101 124 124 ILE ILE B . n B 1 102 VAL 102 125 125 VAL VAL B . n B 1 103 VAL 103 126 126 VAL VAL B . n B 1 104 ALA 104 127 127 ALA ALA B . n B 1 105 ASP 105 128 128 ASP ASP B . n B 1 106 ILE 106 129 129 ILE ILE B . n B 1 107 GLY 107 130 130 GLY GLY B . n B 1 108 ILE 108 131 131 ILE ILE B . n B 1 109 PRO 109 132 132 PRO PRO B . n B 1 110 GLU 110 133 133 GLU GLU B . n B 1 111 GLU 111 134 134 GLU GLU B . n B 1 112 THR 112 135 135 THR THR B . n B 1 113 SER 113 136 136 SER SER B . n B 1 114 SER 114 137 137 SER SER B . n B 1 115 LYS 115 138 138 LYS LYS B . n B 1 116 GLN 116 139 139 GLN GLN B . n B 1 117 HIS 117 140 140 HIS HIS B . n B 1 118 CYS 118 141 141 CYS CYS B . n B 1 119 VAL 119 142 142 VAL VAL B . n B 1 120 ILE 120 143 143 ILE ILE B . n B 1 121 GLN 121 144 144 GLN GLN B . n B 1 122 PHE 122 145 145 PHE PHE B . n B 1 123 ARG 123 146 146 ARG ARG B . n B 1 124 ASN 124 147 147 ASN ASN B . n B 1 125 VAL 125 148 148 VAL VAL B . n B 1 126 ARG 126 149 149 ARG ARG B . n B 1 127 GLY 127 150 150 GLY GLY B . n B 1 128 ILE 128 151 151 ILE ILE B . n B 1 129 LEU 129 152 152 LEU LEU B . n B 1 130 LYS 130 153 153 LYS LYS B . n B 1 131 CYS 131 154 154 CYS CYS B . n B 1 132 TYR 132 155 155 TYR TYR B . n B 1 133 VAL 133 156 156 VAL VAL B . n B 1 134 MET 134 157 157 MET MET B . n B 1 135 ASP 135 158 158 ASP ASP B . n B 1 136 LEU 136 159 159 LEU LEU B . n B 1 137 ASP 137 160 160 ASP ASP B . n B 1 138 SER 138 161 161 SER SER B . n B 1 139 SER 139 162 162 SER SER B . n B 1 140 ASN 140 163 163 ASN ASN B . n B 1 141 GLY 141 164 164 GLY GLY B . n B 1 142 THR 142 165 165 THR THR B . n B 1 143 CYS 143 166 166 CYS CYS B . n B 1 144 LEU 144 167 167 LEU LEU B . n B 1 145 ASN 145 168 168 ASN ASN B . n B 1 146 ASN 146 169 169 ASN ASN B . n B 1 147 VAL 147 170 170 VAL VAL B . n B 1 148 VAL 148 171 171 VAL VAL B . n B 1 149 ILE 149 172 172 ILE ILE B . n B 1 150 PRO 150 173 173 PRO PRO B . n B 1 151 GLY 151 174 174 GLY GLY B . n B 1 152 ALA 152 175 175 ALA ALA B . n B 1 153 ARG 153 176 176 ARG ARG B . n B 1 154 TYR 154 177 177 TYR TYR B . n B 1 155 ILE 155 178 178 ILE ILE B . n B 1 156 GLU 156 179 179 GLU GLU B . n B 1 157 LEU 157 180 180 LEU LEU B . n B 1 158 ARG 158 181 181 ARG ARG B . n B 1 159 SER 159 182 182 SER SER B . n B 1 160 GLY 160 183 183 GLY GLY B . n B 1 161 ASP 161 184 184 ASP ASP B . n B 1 162 VAL 162 185 185 VAL VAL B . n B 1 163 LEU 163 186 186 LEU LEU B . n B 1 164 THR 164 187 187 THR THR B . n B 1 165 LEU 165 188 188 LEU LEU B . n B 1 166 SER 166 189 189 SER SER B . n B 1 167 GLU 167 190 190 GLU GLU B . n B 1 168 PHE 168 191 191 PHE PHE B . n B 1 169 GLU 169 192 192 GLU GLU B . n B 1 170 GLU 170 193 193 GLU GLU B . n B 1 171 ASP 171 194 194 ASP ASP B . n B 1 172 ASN 172 195 195 ASN ASN B . n B 1 173 ASP 173 196 196 ASP ASP B . n B 1 174 TYR 174 197 197 TYR TYR B . n B 1 175 GLU 175 198 198 GLU GLU B . n B 1 176 LEU 176 199 199 LEU LEU B . n B 1 177 ILE 177 200 200 ILE ILE B . n B 1 178 PHE 178 201 201 PHE PHE B . n B 1 179 MET 179 202 202 MET MET B . n B 1 180 ASN 180 203 203 ASN ASN B . n B 1 181 VAL 181 204 204 VAL VAL B . n B 1 182 HIS 182 205 205 HIS HIS B . n B 1 183 HIS 183 206 206 HIS HIS B . n B 1 184 HIS 184 207 207 HIS HIS B . n B 1 185 HIS 185 208 ? ? ? B . n B 1 186 HIS 186 209 ? ? ? B . n B 1 187 HIS 187 210 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 GOL 1 301 301 GOL GOL A . D 2 GOL 1 302 302 GOL GOL A . E 3 SO4 1 401 401 SO4 SO4 A . F 2 GOL 1 301 301 GOL GOL B . G 3 SO4 1 401 401 SO4 SO4 B . H 4 HOH 1 2001 2001 HOH HOH A . H 4 HOH 2 2002 2002 HOH HOH A . H 4 HOH 3 2003 2003 HOH HOH A . H 4 HOH 4 2004 2004 HOH HOH A . H 4 HOH 5 2005 2005 HOH HOH A . H 4 HOH 6 2006 2006 HOH HOH A . H 4 HOH 7 2007 2007 HOH HOH A . H 4 HOH 8 2008 2008 HOH HOH A . H 4 HOH 9 2009 2009 HOH HOH A . H 4 HOH 10 2010 2010 HOH HOH A . H 4 HOH 11 2011 2011 HOH HOH A . H 4 HOH 12 2012 2012 HOH HOH A . H 4 HOH 13 2013 2013 HOH HOH A . H 4 HOH 14 2014 2014 HOH HOH A . H 4 HOH 15 2015 2015 HOH HOH A . H 4 HOH 16 2016 2016 HOH HOH A . H 4 HOH 17 2017 2017 HOH HOH A . H 4 HOH 18 2018 2018 HOH HOH A . H 4 HOH 19 2019 2019 HOH HOH A . H 4 HOH 20 2020 2020 HOH HOH A . H 4 HOH 21 2021 2021 HOH HOH A . H 4 HOH 22 2022 2022 HOH HOH A . H 4 HOH 23 2023 2023 HOH HOH A . H 4 HOH 24 2024 2024 HOH HOH A . H 4 HOH 25 2025 2025 HOH HOH A . H 4 HOH 26 2026 2026 HOH HOH A . H 4 HOH 27 2027 2027 HOH HOH A . H 4 HOH 28 2028 2028 HOH HOH A . H 4 HOH 29 2029 2029 HOH HOH A . H 4 HOH 30 2030 2030 HOH HOH A . I 4 HOH 1 2001 2001 HOH HOH B . I 4 HOH 2 2002 2002 HOH HOH B . I 4 HOH 3 2003 2003 HOH HOH B . I 4 HOH 4 2004 2004 HOH HOH B . I 4 HOH 5 2005 2005 HOH HOH B . I 4 HOH 6 2006 2006 HOH HOH B . I 4 HOH 7 2007 2007 HOH HOH B . I 4 HOH 8 2008 2008 HOH HOH B . I 4 HOH 9 2009 2009 HOH HOH B . I 4 HOH 10 2010 2010 HOH HOH B . I 4 HOH 11 2011 2011 HOH HOH B . I 4 HOH 12 2012 2012 HOH HOH B . I 4 HOH 13 2013 2013 HOH HOH B . I 4 HOH 14 2014 2014 HOH HOH B . I 4 HOH 15 2015 2015 HOH HOH B . I 4 HOH 16 2016 2016 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_and_software_defined_assembly PQS monomeric 1 2 author_and_software_defined_assembly PQS monomeric 1 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,C,D,E,H 2 1 B,F,G,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 2024 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-09-26 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2019-10-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' Advisory 2 2 'Structure model' 'Version format compliance' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Experimental preparation' 5 3 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' exptl_crystal_grow 2 3 'Structure model' pdbx_database_status 3 3 'Structure model' reflns 4 3 'Structure model' reflns_shell # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_exptl_crystal_grow.method' 2 3 'Structure model' '_exptl_crystal_grow.temp' 3 3 'Structure model' '_pdbx_database_status.status_code_sf' 4 3 'Structure model' '_reflns.pdbx_Rmerge_I_obs' 5 3 'Structure model' '_reflns_shell.Rmerge_I_obs' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 44.0146 48.9940 25.8466 -0.2248 0.0269 -0.0940 0.0504 -0.0763 -0.1439 3.2670 3.8933 3.6945 0.0865 0.2989 -0.6900 -0.0737 0.1376 0.1585 0.0447 -0.1771 0.2470 -0.3701 -0.3320 0.2508 'X-RAY DIFFRACTION' 2 ? refined 66.7896 34.0076 15.5615 -0.1624 0.0499 -0.0429 0.0103 0.1217 -0.0833 3.6527 3.3265 3.9608 0.5674 0.8105 0.1957 -0.0516 0.2601 -0.3043 -0.2830 -0.1931 -0.0385 0.2499 -0.1837 0.2446 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 49 ? ? A 206 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 B 51 ? ? B 206 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal _software.date _software.type _software.location _software.language REFMAC refinement 5.4.0065 ? 1 ? ? ? ? XDS 'data reduction' . ? 2 ? ? ? ? XSCALE 'data scaling' . ? 3 ? ? ? ? SOLVE phasing . ? 4 ? ? ? ? # _pdbx_entry_details.entry_id 2JKD _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;RESIDUES 24-48 AND 113-121 OF CHAIN A AND 24-50 AND 112-121 OF CHAIN B WERE NOT MODELLED IN THE STRUCTURE DUE TO LACK OF DENSITY. ; # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 87 ? ? -162.19 90.95 2 1 LEU A 159 ? ? -97.33 46.16 3 1 LEU A 188 ? ? -96.57 33.58 4 1 HIS A 205 ? ? -118.06 -160.94 5 1 LEU B 159 ? ? -99.75 43.93 6 1 ASN B 169 ? ? 75.87 -6.72 # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 1 A HIS 112 ? CG ? A HIS 89 CG 2 1 Y 1 A HIS 112 ? ND1 ? A HIS 89 ND1 3 1 Y 1 A HIS 112 ? CD2 ? A HIS 89 CD2 4 1 Y 1 A HIS 112 ? CE1 ? A HIS 89 CE1 5 1 Y 1 A HIS 112 ? NE2 ? A HIS 89 NE2 6 1 Y 1 A HIS 206 ? CG ? A HIS 183 CG 7 1 Y 1 A HIS 206 ? ND1 ? A HIS 183 ND1 8 1 Y 1 A HIS 206 ? CD2 ? A HIS 183 CD2 9 1 Y 1 A HIS 206 ? CE1 ? A HIS 183 CE1 10 1 Y 1 A HIS 206 ? NE2 ? A HIS 183 NE2 11 1 Y 1 A HIS 207 ? CA ? A HIS 184 CA 12 1 Y 1 A HIS 207 ? C ? A HIS 184 C 13 1 Y 1 A HIS 207 ? O ? A HIS 184 O 14 1 Y 1 A HIS 207 ? CB ? A HIS 184 CB 15 1 Y 1 A HIS 207 ? CG ? A HIS 184 CG 16 1 Y 1 A HIS 207 ? ND1 ? A HIS 184 ND1 17 1 Y 1 A HIS 207 ? CD2 ? A HIS 184 CD2 18 1 Y 1 A HIS 207 ? CE1 ? A HIS 184 CE1 19 1 Y 1 A HIS 207 ? NE2 ? A HIS 184 NE2 20 1 Y 1 B HIS 206 ? CG ? B HIS 183 CG 21 1 Y 1 B HIS 206 ? ND1 ? B HIS 183 ND1 22 1 Y 1 B HIS 206 ? CD2 ? B HIS 183 CD2 23 1 Y 1 B HIS 206 ? CE1 ? B HIS 183 CE1 24 1 Y 1 B HIS 206 ? NE2 ? B HIS 183 NE2 25 1 Y 1 B HIS 207 ? CA ? B HIS 184 CA 26 1 Y 1 B HIS 207 ? C ? B HIS 184 C 27 1 Y 1 B HIS 207 ? O ? B HIS 184 O 28 1 Y 1 B HIS 207 ? CB ? B HIS 184 CB 29 1 Y 1 B HIS 207 ? CG ? B HIS 184 CG 30 1 Y 1 B HIS 207 ? ND1 ? B HIS 184 ND1 31 1 Y 1 B HIS 207 ? CD2 ? B HIS 184 CD2 32 1 Y 1 B HIS 207 ? CE1 ? B HIS 184 CE1 33 1 Y 1 B HIS 207 ? NE2 ? B HIS 184 NE2 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET 24 ? A MET 1 2 1 Y 1 A TYR 25 ? A TYR 2 3 1 Y 1 A ILE 26 ? A ILE 3 4 1 Y 1 A ASP 27 ? A ASP 4 5 1 Y 1 A ILE 28 ? A ILE 5 6 1 Y 1 A MET 29 ? A MET 6 7 1 Y 1 A PRO 30 ? A PRO 7 8 1 Y 1 A ASP 31 ? A ASP 8 9 1 Y 1 A PHE 32 ? A PHE 9 10 1 Y 1 A SER 33 ? A SER 10 11 1 Y 1 A PRO 34 ? A PRO 11 12 1 Y 1 A SER 35 ? A SER 12 13 1 Y 1 A GLY 36 ? A GLY 13 14 1 Y 1 A LEU 37 ? A LEU 14 15 1 Y 1 A LEU 38 ? A LEU 15 16 1 Y 1 A GLU 39 ? A GLU 16 17 1 Y 1 A LEU 40 ? A LEU 17 18 1 Y 1 A GLU 41 ? A GLU 18 19 1 Y 1 A SER 42 ? A SER 19 20 1 Y 1 A ASN 43 ? A ASN 20 21 1 Y 1 A ASN 44 ? A ASN 21 22 1 Y 1 A LYS 45 ? A LYS 22 23 1 Y 1 A GLU 46 ? A GLU 23 24 1 Y 1 A GLY 47 ? A GLY 24 25 1 Y 1 A ILE 48 ? A ILE 25 26 1 Y 1 A SER 113 ? A SER 90 27 1 Y 1 A LEU 114 ? A LEU 91 28 1 Y 1 A ASP 115 ? A ASP 92 29 1 Y 1 A THR 116 ? A THR 93 30 1 Y 1 A ASP 117 ? A ASP 94 31 1 Y 1 A LEU 118 ? A LEU 95 32 1 Y 1 A ASP 119 ? A ASP 96 33 1 Y 1 A ASP 120 ? A ASP 97 34 1 Y 1 A ARG 121 ? A ARG 98 35 1 Y 1 A HIS 208 ? A HIS 185 36 1 Y 1 A HIS 209 ? A HIS 186 37 1 Y 1 A HIS 210 ? A HIS 187 38 1 Y 1 B MET 24 ? B MET 1 39 1 Y 1 B TYR 25 ? B TYR 2 40 1 Y 1 B ILE 26 ? B ILE 3 41 1 Y 1 B ASP 27 ? B ASP 4 42 1 Y 1 B ILE 28 ? B ILE 5 43 1 Y 1 B MET 29 ? B MET 6 44 1 Y 1 B PRO 30 ? B PRO 7 45 1 Y 1 B ASP 31 ? B ASP 8 46 1 Y 1 B PHE 32 ? B PHE 9 47 1 Y 1 B SER 33 ? B SER 10 48 1 Y 1 B PRO 34 ? B PRO 11 49 1 Y 1 B SER 35 ? B SER 12 50 1 Y 1 B GLY 36 ? B GLY 13 51 1 Y 1 B LEU 37 ? B LEU 14 52 1 Y 1 B LEU 38 ? B LEU 15 53 1 Y 1 B GLU 39 ? B GLU 16 54 1 Y 1 B LEU 40 ? B LEU 17 55 1 Y 1 B GLU 41 ? B GLU 18 56 1 Y 1 B SER 42 ? B SER 19 57 1 Y 1 B ASN 43 ? B ASN 20 58 1 Y 1 B ASN 44 ? B ASN 21 59 1 Y 1 B LYS 45 ? B LYS 22 60 1 Y 1 B GLU 46 ? B GLU 23 61 1 Y 1 B GLY 47 ? B GLY 24 62 1 Y 1 B ILE 48 ? B ILE 25 63 1 Y 1 B ALA 49 ? B ALA 26 64 1 Y 1 B LEU 50 ? B LEU 27 65 1 Y 1 B HIS 112 ? B HIS 89 66 1 Y 1 B SER 113 ? B SER 90 67 1 Y 1 B LEU 114 ? B LEU 91 68 1 Y 1 B ASP 115 ? B ASP 92 69 1 Y 1 B THR 116 ? B THR 93 70 1 Y 1 B ASP 117 ? B ASP 94 71 1 Y 1 B LEU 118 ? B LEU 95 72 1 Y 1 B ASP 119 ? B ASP 96 73 1 Y 1 B ASP 120 ? B ASP 97 74 1 Y 1 B ARG 121 ? B ARG 98 75 1 Y 1 B HIS 208 ? B HIS 185 76 1 Y 1 B HIS 209 ? B HIS 186 77 1 Y 1 B HIS 210 ? B HIS 187 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'SULFATE ION' SO4 4 water HOH #