HEADER MEMBRANE PROTEIN 12-SEP-08 2JLO OBSLTE 02-JUL-14 2JLO 4D1B TITLE STRUCTURE OF MHP1, A NUCLEOBASE-CATION-SYMPORT-1 FAMILY TITLE 2 TRANSPORTER, IN A CLOSED CONFORMATION WITH BENZYLHYDANTOIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: MHP1; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: MICROBACTERIUM LIQUEFACIENS; SOURCE 3 ORGANISM_TAXID: 33918; SOURCE 4 STRAIN: AJ3912; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BLR; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PSHP11 KEYWDS HYDANTOIN, TRANSPORTER, MEMBRANE PROTEIN, KEYWDS 2 NUCLEOBASE-CATION-SYMPORT-1 FAMILY EXPDTA X-RAY DIFFRACTION AUTHOR S.WEYAND,T.SHIMAMURA,S.YAJIMA,S.SUZUKI,O.MIRZA,K.KRUSONG, AUTHOR 2 E.P.CARPENTER,N.G.RUTHERFORD,J.M.HADDEN,J.O'REILLY,P.MA, AUTHOR 3 M.SAIDIJAM,S.G.PATCHING,R.J.HOPE,H.T.NORBERTCZAK, AUTHOR 4 P.C.J.ROACH,S.IWATA,P.J.F.HENDERSON,A.D.CAMERON REVDAT 4 02-JUL-14 2JLO 1 OBSLTE REVDAT 3 24-FEB-09 2JLO 1 VERSN REVDAT 2 11-NOV-08 2JLO 1 JRNL REVDAT 1 28-OCT-08 2JLO 0 JRNL AUTH S.WEYAND,T.SHIMAMURA,S.YAJIMA,S.SUZUKI,O.MIRZA, JRNL AUTH 2 K.KRUSONG,E.P.CARPENTER,N.G.RUTHERFORD,J.M.HADDEN, JRNL AUTH 3 J.O'REILLY,P.MA,M.SAIDIJAM,S.G.PATCHING,R.J.HOPE, JRNL AUTH 4 H.T.NORBERTCZAK,P.C.J.ROACH,S.IWATA, JRNL AUTH 5 P.J.F.HENDERSON,A.D.CAMERON JRNL TITL STRUCTURE AND MOLECULAR MECHANISM OF A NUCLEOBASE- JRNL TITL 2 CATION-SYMPORT-1 FAMILY TRANSPORTER. JRNL REF SCIENCE V. 322 709 2008 JRNL REFN ISSN 0036-8075 JRNL PMID 18927357 JRNL DOI 10.1126/SCIENCE.1164440 REMARK 2 REMARK 2 RESOLUTION. 4.0 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS 1.2 REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 4.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 29.88 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.0 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : 2902712.28 REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 96.3 REMARK 3 NUMBER OF REFLECTIONS : 8910 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING SET) : 0.352 REMARK 3 FREE R VALUE : 0.400 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 9.8 REMARK 3 FREE R VALUE TEST SET COUNT : 872 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : 0.014 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 6 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 4.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 4.25 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 95.7 REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 1323 REMARK 3 BIN R VALUE (WORKING SET) : 0.634 REMARK 3 BIN FREE R VALUE : 0.612 REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 9.3 REMARK 3 BIN FREE R VALUE TEST SET COUNT : 135 REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : 0.053 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3555 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 15 REMARK 3 SOLVENT ATOMS : 0 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 215.5 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 24.75 REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : 83.91 REMARK 3 B12 (A**2) : 0.00 REMARK 3 B13 (A**2) : 0.00 REMARK 3 B23 (A**2) : 0.00 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : 1.05 REMARK 3 ESD FROM SIGMAA (A) : 2.24 REMARK 3 LOW RESOLUTION CUTOFF (A) : 5.00 REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : 1.01 REMARK 3 ESD FROM C-V SIGMAA (A) : 2.19 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : 0.009 REMARK 3 BOND ANGLES (DEGREES) : 1.4 REMARK 3 DIHEDRAL ANGLES (DEGREES) : 21.0 REMARK 3 IMPROPER ANGLES (DEGREES) : 0.91 REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : OVERALL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN BOND (A**2) : NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE (A**2) : NULL ; NULL REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : FLAT MODEL REMARK 3 KSOL : 0.15 REMARK 3 BSOL : 56.953 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : ION.PARAM REMARK 3 PARAMETER FILE 3 : HYD.PAR REMARK 3 PARAMETER FILE 4 : NULL REMARK 3 TOPOLOGY FILE 1 : PROTEIN.TOP REMARK 3 TOPOLOGY FILE 2 : ION.TOP REMARK 3 TOPOLOGY FILE 3 : HYD.TOP REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: BULK SOLVENT MODEL USED. DUE TO THE REMARK 3 LIMITED RESOLUTION LITTLE REFINEMENT WAS CARRIED OUT. THE N- REMARK 3 TERMINAL PART OF HELIX 10 WAS MODIFIED FROM THE STARTING REMARK 3 MODEL, THE LIGAND WAS INSERTED AND MINIMIZATION WAS CARRIED REMARK 3 OUT WITH HARMONIC RESTRAINTS. REMARK 4 REMARK 4 2JLO COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 12-SEP-08. REMARK 100 THE PDBE ID CODE IS EBI-37504. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 30-JAN-05 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.94640 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARRESEARCH REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 9222 REMARK 200 RESOLUTION RANGE HIGH (A) : 4.00 REMARK 200 RESOLUTION RANGE LOW (A) : 40.00 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.0 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 200 DATA REDUNDANCY : 3.1 REMARK 200 R MERGE (I) : 0.06 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.50 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 4.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 4.10 REMARK 200 COMPLETENESS FOR SHELL (%) : 90.2 REMARK 200 DATA REDUNDANCY IN SHELL : 2.8 REMARK 200 R MERGE FOR SHELL (I) : 0.78 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 1.70 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 2JLN REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 72 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 4.7 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PROTEIN WAS CRYSTALLIZED FROM REMARK 280 31-33 % PEG 300, 100 MM NACL AND 100 MM NA-PHOSPHATE (PH REMARK 280 7.0). BENZYL-HYDANTOIN WAS ADDED TO THE DROP AS A REMARK 280 SATURATED SOLUTION. REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 44.27500 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.16000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 53.30900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 55.16000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 44.27500 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 53.30900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 GENERATING THE BIOMOLECULE REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PQS REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 SER A 3 REMARK 465 THR A 4 REMARK 465 PRO A 5 REMARK 465 ILE A 6 REMARK 465 GLU A 7 REMARK 465 GLU A 8 REMARK 465 ALA A 9 REMARK 465 VAL A 472 REMARK 465 ALA A 473 REMARK 465 PRO A 474 REMARK 465 ALA A 475 REMARK 465 ASP A 476 REMARK 465 GLU A 477 REMARK 465 SER A 478 REMARK 465 ALA A 479 REMARK 465 THR A 480 REMARK 465 ALA A 481 REMARK 465 ASN A 482 REMARK 465 THR A 483 REMARK 465 LYS A 484 REMARK 465 GLU A 485 REMARK 465 GLN A 486 REMARK 465 ASN A 487 REMARK 465 GLN A 488 REMARK 465 PRO A 489 REMARK 465 ALA A 490 REMARK 465 GLY A 491 REMARK 465 GLY A 492 REMARK 465 ARG A 493 REMARK 465 GLY A 494 REMARK 465 SER A 495 REMARK 465 HIS A 496 REMARK 465 HIS A 497 REMARK 465 HIS A 498 REMARK 465 HIS A 499 REMARK 465 HIS A 500 REMARK 465 HIS A 501 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 PRO A 471 CA C O CB CG CD REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O SER A 226 - N HIS A 228 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO A 331 C - N - CA ANGL. DEV. = 9.1 DEGREES REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 15 -32.95 -27.09 REMARK 500 SER A 26 50.02 -151.97 REMARK 500 MET A 39 -8.42 -41.00 REMARK 500 GLN A 42 131.62 175.31 REMARK 500 VAL A 43 -36.82 -19.18 REMARK 500 GLN A 51 -4.89 -58.23 REMARK 500 THR A 53 -16.22 -47.53 REMARK 500 ALA A 83 -62.72 -92.45 REMARK 500 ARG A 85 -72.17 -76.94 REMARK 500 THR A 91 -3.55 -50.04 REMARK 500 ALA A 94 -13.33 -42.61 REMARK 500 MET A 96 -70.17 -81.22 REMARK 500 ALA A 111 -72.03 -42.05 REMARK 500 LEU A 112 -76.09 -24.93 REMARK 500 ASP A 130 -19.47 -47.53 REMARK 500 LEU A 135 6.10 -64.92 REMARK 500 LEU A 136 4.01 -150.42 REMARK 500 ALA A 151 -64.51 -95.00 REMARK 500 ASN A 204 54.60 -173.20 REMARK 500 THR A 211 -16.29 -49.81 REMARK 500 TRP A 220 -16.70 -45.09 REMARK 500 ILE A 227 -26.49 -35.48 REMARK 500 ASP A 229 5.42 -48.41 REMARK 500 ILE A 230 -56.24 -130.36 REMARK 500 ALA A 240 -169.47 -116.36 REMARK 500 SER A 264 -5.65 -58.94 REMARK 500 ASN A 282 107.23 -55.30 REMARK 500 PRO A 297 -78.88 -70.03 REMARK 500 MET A 298 -16.02 -44.72 REMARK 500 THR A 313 -54.96 -146.41 REMARK 500 LEU A 320 -74.70 -54.37 REMARK 500 THR A 329 20.33 -142.58 REMARK 500 PHE A 330 54.34 -169.27 REMARK 500 PRO A 331 -73.46 -40.42 REMARK 500 ARG A 332 13.00 -69.94 REMARK 500 VAL A 340 -71.90 -64.89 REMARK 500 MET A 351 62.55 26.61 REMARK 500 TRP A 353 -5.73 -38.82 REMARK 500 THR A 361 34.54 20.66 REMARK 500 ARG A 386 25.70 34.17 REMARK 500 ARG A 387 13.21 94.28 REMARK 500 HIS A 392 -62.53 -21.75 REMARK 500 TYR A 403 -143.72 53.47 REMARK 500 TRP A 404 85.80 -64.46 REMARK 500 ASN A 408 78.80 -114.48 REMARK 500 THR A 425 66.95 -155.77 REMARK 500 LEU A 434 -72.33 -55.66 REMARK 500 ILE A 435 -18.93 -48.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 650 REMARK 650 HELIX REMARK 650 DETERMINATION METHOD: AUTHOR PROVIDED. REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 5FH A1471 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A1472 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JLN RELATED DB: PDB REMARK 900 STRUCTURE OF MHP1, A NUCLEOBASE-CATION- REMARK 900 SYMPORT-1 FAMILY TRANSPORTER REMARK 999 REMARK 999 THE BENZYL-HYDANTOIN WAS INSERTED INTO THE ELECTRON REMARK 999 DENSITY USING THE POSITION OF CONSERVED RESIDUES AS A REMARK 999 GUIDE. THE MODEL WAS MADE WITH REGARD TO MAPS CALCULATED REMARK 999 WITH A RESOLUTION RANGE OF 10-4A OR WITH SHARPENED MAPS IN REMARK 999 ADDITION TO NORMAL 2FO-FC MAPS. DBREF 2JLO A 1 495 PDB 2JLO 2JLO 1 495 DBREF 2JLO A 496 501 PDB 2JLO 2JLO 496 501 SEQRES 1 A 501 MET ASN SER THR PRO ILE GLU GLU ALA ARG SER LEU LEU SEQRES 2 A 501 ASN PRO SER ASN ALA PRO THR ARG TYR ALA GLU ARG SER SEQRES 3 A 501 VAL GLY PRO PHE SER LEU ALA ALA ILE TRP PHE ALA MET SEQRES 4 A 501 ALA ILE GLN VAL ALA ILE PHE ILE ALA ALA GLY GLN MET SEQRES 5 A 501 THR SER SER PHE GLN VAL TRP GLN VAL ILE VAL ALA ILE SEQRES 6 A 501 ALA ALA GLY CYS THR ILE ALA VAL ILE LEU LEU PHE PHE SEQRES 7 A 501 THR GLN SER ALA ALA ILE ARG TRP GLY ILE ASN PHE THR SEQRES 8 A 501 VAL ALA ALA ARG MET PRO PHE GLY ILE ARG GLY SER LEU SEQRES 9 A 501 ILE PRO ILE THR LEU LYS ALA LEU LEU SER LEU PHE TRP SEQRES 10 A 501 PHE GLY PHE GLN THR TRP LEU GLY ALA LEU ALA LEU ASP SEQRES 11 A 501 GLU ILE THR ARG LEU LEU THR GLY PHE THR ASN LEU PRO SEQRES 12 A 501 LEU TRP ILE VAL ILE PHE GLY ALA ILE GLN VAL VAL THR SEQRES 13 A 501 THR PHE TYR GLY ILE THR PHE ILE ARG TRP MET ASN VAL SEQRES 14 A 501 PHE ALA SER PRO VAL LEU LEU ALA MET GLY VAL TYR MET SEQRES 15 A 501 VAL TYR LEU MET LEU ASP GLY ALA ASP VAL SER LEU GLY SEQRES 16 A 501 GLU VAL MET SER MET GLY GLY GLU ASN PRO GLY MET PRO SEQRES 17 A 501 PHE SER THR ALA ILE MET ILE PHE VAL GLY GLY TRP ILE SEQRES 18 A 501 ALA VAL VAL VAL SER ILE HIS ASP ILE VAL LYS GLU CYS SEQRES 19 A 501 LYS VAL ASP PRO ASN ALA SER ARG GLU GLY GLN THR LYS SEQRES 20 A 501 ALA ASP ALA ARG TYR ALA THR ALA GLN TRP LEU GLY MET SEQRES 21 A 501 VAL PRO ALA SER ILE ILE PHE GLY PHE ILE GLY ALA ALA SEQRES 22 A 501 SER MET VAL LEU VAL GLY GLU TRP ASN PRO VAL ILE ALA SEQRES 23 A 501 ILE THR GLU VAL VAL GLY GLY VAL SER ILE PRO MET ALA SEQRES 24 A 501 ILE LEU PHE GLN VAL PHE VAL LEU LEU ALA THR TRP SER SEQRES 25 A 501 THR ASN PRO ALA ALA ASN LEU LEU SER PRO ALA TYR THR SEQRES 26 A 501 LEU CYS SER THR PHE PRO ARG VAL PHE THR PHE LYS THR SEQRES 27 A 501 GLY VAL ILE VAL SER ALA VAL VAL GLY LEU LEU MET MET SEQRES 28 A 501 PRO TRP GLN PHE ALA GLY VAL LEU ASN THR PHE LEU ASN SEQRES 29 A 501 LEU LEU ALA SER ALA LEU GLY PRO LEU ALA GLY ILE MET SEQRES 30 A 501 ILE SER ASP TYR PHE LEU VAL ARG ARG ARG ARG ILE SER SEQRES 31 A 501 LEU HIS ASP LEU TYR ARG THR LYS GLY ILE TYR THR TYR SEQRES 32 A 501 TRP ARG GLY VAL ASN TRP VAL ALA LEU ALA VAL TYR ALA SEQRES 33 A 501 VAL ALA LEU ALA VAL SER PHE LEU THR PRO ASP LEU MET SEQRES 34 A 501 PHE VAL THR GLY LEU ILE ALA ALA LEU LEU LEU HIS ILE SEQRES 35 A 501 PRO ALA MET ARG TRP VAL ALA LYS THR PHE PRO LEU PHE SEQRES 36 A 501 SER GLU ALA GLU SER ARG ASN GLU ASP TYR LEU ARG PRO SEQRES 37 A 501 ILE GLY PRO VAL ALA PRO ALA ASP GLU SER ALA THR ALA SEQRES 38 A 501 ASN THR LYS GLU GLN ASN GLN PRO ALA GLY GLY ARG GLY SEQRES 39 A 501 SER HIS HIS HIS HIS HIS HIS HET 5FH A1471 14 HET NA A1472 1 HETNAM 5FH (5S)-5-BENZYLIMIDAZOLIDINE-2,4-DIONE HETNAM NA SODIUM ION HETSYN 5FH 5-BENZYL-L-HYDANTOIN FORMUL 2 5FH C10 H10 N2 O2 FORMUL 3 NA NA 1+ HELIX 1 1 ARG A 21 ARG A 25 5 5 HELIX 1 1 GLY A 28 ILE A 41 1 14 HELIX 2 2 VAL A 43 SER A 55 1 13 HELIX 3 3 GLN A 57 GLY A 87 1 31 HELIX 4 4 ASN A 89 MET A 96 1 8 HELIX 5 5 ARG A 101 GLY A 138 1 37 HELIX 6 6 ASN A 141 TYR A 159 1 19 HELIX 7 7 ILE A 161 ASP A 191 1 31 HELIX 8 8 LEU A 194 SER A 199 1 6 HELIX 9 9 PHE A 209 SER A 226 1 18 HELIX 10 10 ILE A 227 GLU A 233 1 7 HELIX 11 11 SER A 241 GLY A 279 1 39 HELIX 12 12 ASN A 282 GLY A 292 1 11 HELIX 13 13 SER A 295 THR A 329 1 34 HELIX 14 14 THR A 335 MET A 350 1 16 HELIX 15 15 ASN A 360 ARG A 385 1 16 HELIX 16 16 SER A 390 TYR A 395 1 6 HELIX 17 17 ASN A 408 LEU A 424 1 17 HELIX 18 18 LEU A 428 ALA A 449 1 22 HELIX 19 19 SER A 456 LEU A 466 5 11 LINK NA NA A1472 O ALA A 309 1555 1555 2.56 SITE 1 AC1 6 GLN A 42 TRP A 117 GLN A 121 GLY A 219 SITE 2 AC1 6 TRP A 220 ASN A 318 SITE 1 AC2 6 ALA A 38 MET A 39 ILE A 41 ALA A 309 SITE 2 AC2 6 SER A 312 THR A 313 CRYST1 88.550 106.618 110.320 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011293 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009379 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009065 0.00000