HEADER HYDROLASE/RNA 15-SEP-08 2JLX TITLE DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH SSRNA AND ADP-VANADATE COMPND MOL_ID: 1; COMPND 2 MOLECULE: SERINE PROTEASE SUBUNIT NS3; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: RESIDUES 1646-2092; COMPND 5 SYNONYM: DENV4 NS3 HELICASE, NON-STRUCTURAL PROTEIN 3; COMPND 6 EC: 3.4.21.91; COMPND 7 ENGINEERED: YES; COMPND 8 MOL_ID: 2; COMPND 9 MOLECULE: 5'-R(*AP*GP*AP*CP*UP*AP*AP*CP*AP*AP*CP*U)-3'; COMPND 10 CHAIN: C, D; COMPND 11 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DENGUE VIRUS 4; SOURCE 3 ORGANISM_TAXID: 408688; SOURCE 4 STRAIN: THAILAND/0348/1991; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 MOL_ID: 2; SOURCE 8 SYNTHETIC: YES KEYWDS HYDROLASE-RNA COMPLEX, HYDROLASE RNA COMPLEX, ENVELOPE PROTEIN, KEYWDS 2 RIBONUCLEOPROTEIN, CAPSID PROTEIN, RNA REPLICATION, SERINE PROTEASE, KEYWDS 3 GLYCOPROTEIN, DENGUE VIRUS, METAL-BINDING, TRANSFERASE, ATP-BINDING, KEYWDS 4 RNA-BINDING, FLAVIVIRUSES, TRANSCRIPTION REGULATION, RNA-DIRECTED KEYWDS 5 RNA POLYMERASE, NUCLEOTIDE-BINDING, VIRAL NUCLEOPROTEIN, SECRETED, KEYWDS 6 HELICASE, VANADATE, PROTEASE, HYDROLASE, CLEAVAGE ON PAIR OF BASIC KEYWDS 7 RESIDUES, ENDOPLASMIC RETICULUM, NUCLEOTIDYLTRANSFERASE, ADP, SSRNA, KEYWDS 8 VIRION, ATPASE, NUCLEUS, MEMBRANE, TRANSMEMBRANE, TRANSCRIPTION, KEYWDS 9 PHOSPHOPROTEIN, NS3 HELICASE STRUCTURE, MULTIFUNCTIONAL ENZYME EXPDTA X-RAY DIFFRACTION AUTHOR D.H.LUO,T.XU,R.P.WATSON,D.S.BECKER,A.SAMPATH,W.JAHNKE,S.S.YEONG, AUTHOR 2 C.H.WANG,S.P.LIM,S.G.VASUDEVAN,J.LESCAR REVDAT 5 13-DEC-23 2JLX 1 REMARK LINK REVDAT 4 13-JUL-11 2JLX 1 VERSN REVDAT 3 10-NOV-09 2JLX 1 KEYWDS JRNL REMARK REVDAT 2 13-JAN-09 2JLX 1 VERSN JRNL REVDAT 1 25-NOV-08 2JLX 0 JRNL AUTH D.H.LUO,T.XU,R.P.WATSON,D.SCHERER-BECKER,A.SAMPATH,W.JAHNKE, JRNL AUTH 2 S.S.YEONG,C.H.WANG,S.P.LIM,A.STRONGIN,S.G.VASUDEVAN,J.LESCAR JRNL TITL INSIGHTS INTO RNA UNWINDING AND ATP HYDROLYSIS BY THE JRNL TITL 2 FLAVIVIRUS NS3 PROTEIN. JRNL REF EMBO J. V. 27 3209 2008 JRNL REFN ISSN 0261-4189 JRNL PMID 19008861 JRNL DOI 10.1038/EMBOJ.2008.232 REMARK 2 REMARK 2 RESOLUTION. 2.20 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.2.0019 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.20 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 98.6 REMARK 3 NUMBER OF REFLECTIONS : 41743 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.198 REMARK 3 R VALUE (WORKING SET) : 0.196 REMARK 3 FREE R VALUE : 0.245 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2213 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.20 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.26 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3037 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 BIN R VALUE (WORKING SET) : 0.3070 REMARK 3 BIN FREE R VALUE SET COUNT : 168 REMARK 3 BIN FREE R VALUE : 0.3830 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 7211 REMARK 3 NUCLEIC ACID ATOMS : 304 REMARK 3 HETEROGEN ATOMS : 67 REMARK 3 SOLVENT ATOMS : 384 REMARK 3 REMARK 3 B VALUES. REMARK 3 B VALUE TYPE : LIKELY RESIDUAL REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 21.54 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.97000 REMARK 3 B22 (A**2) : -1.00000 REMARK 3 B33 (A**2) : 0.91000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.95000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.396 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.241 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.204 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 16.031 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.943 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.912 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 7789 ; 0.009 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 10628 ; 1.223 ; 2.028 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 902 ; 5.659 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 348 ;35.202 ;22.874 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1305 ;16.076 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 81 ;14.486 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1163 ; 0.079 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5817 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): 3449 ; 0.194 ; 0.200 REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): 5221 ; 0.301 ; 0.200 REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): 473 ; 0.270 ; 0.200 REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): 137 ; 0.221 ; 0.200 REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): 36 ; 0.194 ; 0.200 REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 4642 ; 0.579 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 7336 ; 0.976 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3670 ; 1.300 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3292 ; 2.181 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : 2 REMARK 3 REMARK 3 NCS GROUP NUMBER : 1 REMARK 3 CHAIN NAMES : A B REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 2 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 A 175 A 270 2 REMARK 3 1 B 175 B 270 2 REMARK 3 2 A 280 A 618 2 REMARK 3 2 B 280 B 618 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 TIGHT POSITIONAL 1 A (A): 1732 ; 0.04 ; 0.05 REMARK 3 MEDIUM POSITIONAL 1 A (A): 1741 ; 0.24 ; 0.50 REMARK 3 TIGHT THERMAL 1 A (A**2): 1732 ; 0.06 ; 0.50 REMARK 3 MEDIUM THERMAL 1 A (A**2): 1741 ; 0.42 ; 2.00 REMARK 3 REMARK 3 NCS GROUP NUMBER : 2 REMARK 3 CHAIN NAMES : C D REMARK 3 NUMBER OF COMPONENTS NCS GROUP : 1 REMARK 3 COMPONENT C SSSEQI TO C SSSEQI CODE REMARK 3 1 C 1 C 5 2 REMARK 3 1 D 1 D 5 2 REMARK 3 GROUP CHAIN COUNT RMS WEIGHT REMARK 3 MEDIUM POSITIONAL 2 C (A): 104 ; 0.14 ; 0.50 REMARK 3 MEDIUM THERMAL 2 C (A**2): 104 ; 0.40 ; 2.00 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 8 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 168 A 326 REMARK 3 ORIGIN FOR THE GROUP (A): 40.1112 -15.5893 1.7447 REMARK 3 T TENSOR REMARK 3 T11: 0.0187 T22: -0.1061 REMARK 3 T33: -0.1004 T12: -0.0059 REMARK 3 T13: 0.0034 T23: 0.0127 REMARK 3 L TENSOR REMARK 3 L11: 1.7887 L22: 2.2204 REMARK 3 L33: 1.2583 L12: 0.1639 REMARK 3 L13: 0.6730 L23: 0.2745 REMARK 3 S TENSOR REMARK 3 S11: 0.0581 S12: -0.1172 S13: -0.0737 REMARK 3 S21: 0.0683 S22: -0.0319 S23: -0.1137 REMARK 3 S31: 0.2100 S32: -0.1148 S33: -0.0262 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 327 A 481 REMARK 3 ORIGIN FOR THE GROUP (A): 23.8439 4.3795 -3.1776 REMARK 3 T TENSOR REMARK 3 T11: -0.0336 T22: -0.0206 REMARK 3 T33: -0.0475 T12: 0.0369 REMARK 3 T13: -0.0184 T23: -0.0059 REMARK 3 L TENSOR REMARK 3 L11: 2.1956 L22: 0.8822 REMARK 3 L33: 1.8488 L12: 0.0290 REMARK 3 L13: 1.2934 L23: 0.0544 REMARK 3 S TENSOR REMARK 3 S11: -0.1011 S12: -0.2402 S13: 0.0276 REMARK 3 S21: -0.1004 S22: 0.0872 S23: 0.2369 REMARK 3 S31: -0.1757 S32: -0.3451 S33: 0.0139 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 482 A 618 REMARK 3 ORIGIN FOR THE GROUP (A): 48.8283 11.2752 12.0347 REMARK 3 T TENSOR REMARK 3 T11: -0.0549 T22: -0.0817 REMARK 3 T33: -0.0838 T12: 0.0197 REMARK 3 T13: -0.0213 T23: 0.0080 REMARK 3 L TENSOR REMARK 3 L11: 1.1630 L22: 3.9778 REMARK 3 L33: 2.1041 L12: -0.5802 REMARK 3 L13: -0.5720 L23: 2.6959 REMARK 3 S TENSOR REMARK 3 S11: -0.0664 S12: -0.0577 S13: 0.0411 REMARK 3 S21: 0.1392 S22: 0.1848 S23: -0.1964 REMARK 3 S31: 0.1268 S32: 0.0729 S33: -0.1184 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 1 C 7 REMARK 3 ORIGIN FOR THE GROUP (A): 38.2183 -0.6408 11.6984 REMARK 3 T TENSOR REMARK 3 T11: 0.0667 T22: 0.0134 REMARK 3 T33: -0.0787 T12: 0.0058 REMARK 3 T13: -0.0990 T23: -0.0239 REMARK 3 L TENSOR REMARK 3 L11: 8.1247 L22: 22.6644 REMARK 3 L33: 2.0493 L12: -10.5828 REMARK 3 L13: 1.7952 L23: -6.1692 REMARK 3 S TENSOR REMARK 3 S11: -0.9307 S12: -0.8526 S13: 0.5777 REMARK 3 S21: 1.4734 S22: 0.5224 S23: -1.1914 REMARK 3 S31: -0.6269 S32: -0.3328 S33: 0.4083 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 168 B 326 REMARK 3 ORIGIN FOR THE GROUP (A): 21.6741 -5.3348 36.0860 REMARK 3 T TENSOR REMARK 3 T11: -0.0561 T22: -0.0620 REMARK 3 T33: 0.1026 T12: -0.0307 REMARK 3 T13: 0.0992 T23: 0.0408 REMARK 3 L TENSOR REMARK 3 L11: 2.4296 L22: 2.3028 REMARK 3 L33: 0.8676 L12: -1.0288 REMARK 3 L13: 0.8663 L23: 0.5285 REMARK 3 S TENSOR REMARK 3 S11: 0.1354 S12: 0.2407 S13: 0.5243 REMARK 3 S21: -0.1016 S22: -0.0302 S23: -0.3517 REMARK 3 S31: -0.1873 S32: 0.0957 S33: -0.1052 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 327 B 481 REMARK 3 ORIGIN FOR THE GROUP (A): 8.1705 -25.4235 25.8958 REMARK 3 T TENSOR REMARK 3 T11: -0.0764 T22: 0.0113 REMARK 3 T33: -0.0775 T12: 0.0206 REMARK 3 T13: 0.0055 T23: -0.0393 REMARK 3 L TENSOR REMARK 3 L11: 4.0122 L22: 0.5083 REMARK 3 L33: 0.8217 L12: -0.2324 REMARK 3 L13: 0.7180 L23: 0.1374 REMARK 3 S TENSOR REMARK 3 S11: 0.0146 S12: 0.5246 S13: -0.1973 REMARK 3 S21: -0.1089 S22: 0.0213 S23: 0.1056 REMARK 3 S31: -0.0193 S32: 0.0604 S33: -0.0359 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 482 B 618 REMARK 3 ORIGIN FOR THE GROUP (A): 35.0831 -32.2131 37.3647 REMARK 3 T TENSOR REMARK 3 T11: -0.0944 T22: -0.0454 REMARK 3 T33: -0.0588 T12: -0.0046 REMARK 3 T13: 0.0002 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 1.7426 L22: 3.7371 REMARK 3 L33: 2.1466 L12: -1.4519 REMARK 3 L13: -0.5390 L23: 1.6995 REMARK 3 S TENSOR REMARK 3 S11: -0.0203 S12: -0.1281 S13: 0.1123 REMARK 3 S21: 0.0861 S22: 0.1319 S23: -0.2207 REMARK 3 S31: 0.0113 S32: 0.1354 S33: -0.1116 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 1 D 7 REMARK 3 ORIGIN FOR THE GROUP (A): 28.5473 -20.3910 28.7874 REMARK 3 T TENSOR REMARK 3 T11: -0.0012 T22: 0.0689 REMARK 3 T33: 0.1379 T12: -0.0667 REMARK 3 T13: 0.1071 T23: -0.0133 REMARK 3 L TENSOR REMARK 3 L11: 8.7994 L22: 30.6274 REMARK 3 L33: 0.9265 L12: 11.6259 REMARK 3 L13: -0.2409 L23: 2.7388 REMARK 3 S TENSOR REMARK 3 S11: 0.7199 S12: -0.0967 S13: -0.9459 REMARK 3 S21: -0.1888 S22: -0.2222 S23: -2.5261 REMARK 3 S31: -0.1774 S32: 0.5140 S33: -0.4977 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS. REMARK 4 REMARK 4 2JLX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBE ON 15-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1290037567. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : NULL REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID14-4 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.99 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 127207 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.200 REMARK 200 RESOLUTION RANGE LOW (A) : 78.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : 0.10000 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 11.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.20 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.30 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.7 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : 0.50000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: PDB ENTRY 2JLU REMARK 200 REMARK 200 REMARK: NONE REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 38.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.00 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 66.26850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 52.60350 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 66.26850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 52.60350 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3220 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20450 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -32.4 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20130 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -45.9 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 A C 9 REMARK 465 A C 10 REMARK 465 C C 11 REMARK 465 U C 12 REMARK 465 A D 9 REMARK 465 A D 10 REMARK 465 C D 11 REMARK 465 U D 12 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG B 526 CG CD NE CZ NH1 NH2 REMARK 470 C C 8 C5' C4' O4' C3' O3' C2' O2' REMARK 470 C C 8 C1' N1 C2 O2 N3 C4 N4 REMARK 470 C C 8 C5 C6 REMARK 470 C D 8 C5' C4' O4' C3' O3' C2' O2' REMARK 470 C D 8 C1' N1 C2 O2 N3 C4 N4 REMARK 470 C D 8 C5 C6 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD1 ASP A 181 O HOH A 2011 2.13 REMARK 500 OE1 GLN A 243 O HOH A 2032 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 2025 O HOH A 2119 4545 0.00 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 U D 5 O4' - C1' - N1 ANGL. DEV. = 5.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 186 -7.65 82.84 REMARK 500 ARG A 202 -50.28 -126.18 REMARK 500 GLN A 243 57.43 -110.11 REMARK 500 PRO A 245 3.04 -63.40 REMARK 500 LYS A 398 -70.05 -93.04 REMARK 500 ASP A 436 88.20 -61.50 REMARK 500 ASP A 469 54.84 -117.59 REMARK 500 ARG A 592 74.07 -151.40 REMARK 500 LYS B 186 -8.14 84.45 REMARK 500 ASP B 192 41.64 -103.79 REMARK 500 ARG B 202 -54.96 -123.92 REMARK 500 GLN B 243 58.56 -108.51 REMARK 500 PRO B 245 0.21 -61.06 REMARK 500 SER B 272 1.14 -66.88 REMARK 500 LYS B 398 -69.70 -90.32 REMARK 500 ASP B 436 84.82 -56.46 REMARK 500 ASP B 469 52.81 -115.30 REMARK 500 PRO B 511 -18.42 -49.81 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A1621 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 200 OG1 REMARK 620 2 ADP A1619 O1B 97.0 REMARK 620 3 VO4 A1620 O4 169.2 88.9 REMARK 620 4 HOH A2196 O 89.3 103.4 98.1 REMARK 620 5 HOH A2197 O 79.4 172.6 93.7 83.0 REMARK 620 6 HOH A2198 O 84.3 81.4 87.7 172.5 91.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 VO4 A1620 V REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP A1619 O3B REMARK 620 2 VO4 A1620 O1 65.3 REMARK 620 3 VO4 A1620 O2 88.1 114.0 REMARK 620 4 VO4 A1620 O3 168.2 107.4 103.6 REMARK 620 5 VO4 A1620 O4 74.3 113.1 115.4 101.7 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B1621 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR B 200 OG1 REMARK 620 2 ADP B1619 O1B 87.8 REMARK 620 3 VO4 B1620 O3 170.8 85.8 REMARK 620 4 HOH B2170 O 84.7 77.9 87.4 REMARK 620 5 HOH B2171 O 88.6 170.9 96.8 93.5 REMARK 620 6 HOH B2172 O 102.8 104.2 85.2 172.1 84.7 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 VO4 B1620 V REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ADP B1619 O3B REMARK 620 2 VO4 B1620 O1 167.3 REMARK 620 3 VO4 B1620 O2 67.9 104.1 REMARK 620 4 VO4 B1620 O3 72.9 103.4 115.6 REMARK 620 5 VO4 B1620 O4 88.2 104.3 112.8 114.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 1619 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 1619 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VO4 A 1620 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE VO4 B 1620 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 1621 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 1621 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 1622 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JLR RELATED DB: PDB REMARK 900 DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH AMPPNP REMARK 900 RELATED ID: 2JLQ RELATED DB: PDB REMARK 900 DENGUE VIRUS 4 NS3 HELICASE STRUCTURE, APO ENZYME. REMARK 900 RELATED ID: 2JLW RELATED DB: PDB REMARK 900 DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH SSRNA2 REMARK 900 RELATED ID: 2JLU RELATED DB: PDB REMARK 900 DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH SSRNA REMARK 900 RELATED ID: 2JLV RELATED DB: PDB REMARK 900 DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH SSRNA AND AMPPNP REMARK 900 RELATED ID: 2JLS RELATED DB: PDB REMARK 900 DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH ADP REMARK 900 RELATED ID: 2JLZ RELATED DB: PDB REMARK 900 DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH SSRNA AND ADP REMARK 900 RELATED ID: 2JLY RELATED DB: PDB REMARK 900 DENGUE VIRUS 4 NS3 HELICASE IN COMPLEX WITH SSRNA AND ADP-PHOSPHATE DBREF 2JLX A 168 171 PDB 2JLX 2JLX 168 171 DBREF 2JLX A 172 618 UNP Q2YHF0 POLG_DEN4T 1646 2092 DBREF 2JLX B 168 171 PDB 2JLX 2JLX 168 171 DBREF 2JLX B 172 618 UNP Q2YHF0 POLG_DEN4T 1646 2092 DBREF 2JLX C 1 12 PDB 2JLX 2JLX 1 12 DBREF 2JLX D 1 12 PDB 2JLX 2JLX 1 12 SEQADV 2JLX ASP A 250 UNP Q2YHF0 GLU 1724 CONFLICT SEQADV 2JLX CYS A 292 UNP Q2YHF0 SER 1766 CONFLICT SEQADV 2JLX SER A 321 UNP Q2YHF0 THR 1795 CONFLICT SEQADV 2JLX ILE A 322 UNP Q2YHF0 THR 1796 CONFLICT SEQADV 2JLX ARG A 381 UNP Q2YHF0 LYS 1855 CONFLICT SEQADV 2JLX LYS A 480 UNP Q2YHF0 ARG 1954 CONFLICT SEQADV 2JLX ASP B 250 UNP Q2YHF0 GLU 1724 CONFLICT SEQADV 2JLX CYS B 292 UNP Q2YHF0 SER 1766 CONFLICT SEQADV 2JLX SER B 321 UNP Q2YHF0 THR 1795 CONFLICT SEQADV 2JLX ILE B 322 UNP Q2YHF0 THR 1796 CONFLICT SEQADV 2JLX ARG B 381 UNP Q2YHF0 LYS 1855 CONFLICT SEQADV 2JLX LYS B 480 UNP Q2YHF0 ARG 1954 CONFLICT SEQRES 1 A 451 GLY SER ALA MET GLY GLU PRO ASP TYR GLU VAL ASP GLU SEQRES 2 A 451 ASP ILE PHE ARG LYS LYS ARG LEU THR ILE MET ASP LEU SEQRES 3 A 451 HIS PRO GLY ALA GLY LYS THR LYS ARG ILE LEU PRO SER SEQRES 4 A 451 ILE VAL ARG GLU ALA LEU LYS ARG ARG LEU ARG THR LEU SEQRES 5 A 451 ILE LEU ALA PRO THR ARG VAL VAL ALA ALA GLU MET GLU SEQRES 6 A 451 GLU ALA LEU ARG GLY LEU PRO ILE ARG TYR GLN THR PRO SEQRES 7 A 451 ALA VAL LYS SER ASP HIS THR GLY ARG GLU ILE VAL ASP SEQRES 8 A 451 LEU MET CYS HIS ALA THR PHE THR THR ARG LEU LEU SER SEQRES 9 A 451 SER THR ARG VAL PRO ASN TYR ASN LEU ILE VAL MET ASP SEQRES 10 A 451 GLU ALA HIS PHE THR ASP PRO CYS SER VAL ALA ALA ARG SEQRES 11 A 451 GLY TYR ILE SER THR ARG VAL GLU MET GLY GLU ALA ALA SEQRES 12 A 451 ALA ILE PHE MET THR ALA THR PRO PRO GLY SER ILE ASP SEQRES 13 A 451 PRO PHE PRO GLN SER ASN SER PRO ILE GLU ASP ILE GLU SEQRES 14 A 451 ARG GLU ILE PRO GLU ARG SER TRP ASN THR GLY PHE ASP SEQRES 15 A 451 TRP ILE THR ASP TYR GLN GLY LYS THR VAL TRP PHE VAL SEQRES 16 A 451 PRO SER ILE LYS ALA GLY ASN ASP ILE ALA ASN CYS LEU SEQRES 17 A 451 ARG LYS SER GLY LYS ARG VAL ILE GLN LEU SER ARG LYS SEQRES 18 A 451 THR PHE ASP THR GLU TYR PRO LYS THR LYS LEU THR ASP SEQRES 19 A 451 TRP ASP PHE VAL VAL THR THR ASP ILE SER GLU MET GLY SEQRES 20 A 451 ALA ASN PHE ARG ALA GLY ARG VAL ILE ASP PRO ARG ARG SEQRES 21 A 451 CYS LEU LYS PRO VAL ILE LEU THR ASP GLY PRO GLU ARG SEQRES 22 A 451 VAL ILE LEU ALA GLY PRO ILE PRO VAL THR PRO ALA SER SEQRES 23 A 451 ALA ALA GLN ARG ARG GLY ARG ILE GLY ARG ASN PRO ALA SEQRES 24 A 451 GLN GLU ASP ASP GLN TYR VAL PHE SER GLY ASP PRO LEU SEQRES 25 A 451 LYS ASN ASP GLU ASP HIS ALA HIS TRP THR GLU ALA LYS SEQRES 26 A 451 MET LEU LEU ASP ASN ILE TYR THR PRO GLU GLY ILE ILE SEQRES 27 A 451 PRO THR LEU PHE GLY PRO GLU ARG GLU LYS THR GLN ALA SEQRES 28 A 451 ILE ASP GLY GLU PHE ARG LEU ARG GLY GLU GLN ARG LYS SEQRES 29 A 451 THR PHE VAL GLU LEU MET ARG ARG GLY ASP LEU PRO VAL SEQRES 30 A 451 TRP LEU SER TYR LYS VAL ALA SER ALA GLY ILE SER TYR SEQRES 31 A 451 LYS ASP ARG GLU TRP CYS PHE THR GLY GLU ARG ASN ASN SEQRES 32 A 451 GLN ILE LEU GLU GLU ASN MET GLU VAL GLU ILE TRP THR SEQRES 33 A 451 ARG GLU GLY GLU LYS LYS LYS LEU ARG PRO LYS TRP LEU SEQRES 34 A 451 ASP ALA ARG VAL TYR ALA ASP PRO MET ALA LEU LYS ASP SEQRES 35 A 451 PHE LYS GLU PHE ALA SER GLY ARG LYS SEQRES 1 B 451 GLY SER ALA MET GLY GLU PRO ASP TYR GLU VAL ASP GLU SEQRES 2 B 451 ASP ILE PHE ARG LYS LYS ARG LEU THR ILE MET ASP LEU SEQRES 3 B 451 HIS PRO GLY ALA GLY LYS THR LYS ARG ILE LEU PRO SER SEQRES 4 B 451 ILE VAL ARG GLU ALA LEU LYS ARG ARG LEU ARG THR LEU SEQRES 5 B 451 ILE LEU ALA PRO THR ARG VAL VAL ALA ALA GLU MET GLU SEQRES 6 B 451 GLU ALA LEU ARG GLY LEU PRO ILE ARG TYR GLN THR PRO SEQRES 7 B 451 ALA VAL LYS SER ASP HIS THR GLY ARG GLU ILE VAL ASP SEQRES 8 B 451 LEU MET CYS HIS ALA THR PHE THR THR ARG LEU LEU SER SEQRES 9 B 451 SER THR ARG VAL PRO ASN TYR ASN LEU ILE VAL MET ASP SEQRES 10 B 451 GLU ALA HIS PHE THR ASP PRO CYS SER VAL ALA ALA ARG SEQRES 11 B 451 GLY TYR ILE SER THR ARG VAL GLU MET GLY GLU ALA ALA SEQRES 12 B 451 ALA ILE PHE MET THR ALA THR PRO PRO GLY SER ILE ASP SEQRES 13 B 451 PRO PHE PRO GLN SER ASN SER PRO ILE GLU ASP ILE GLU SEQRES 14 B 451 ARG GLU ILE PRO GLU ARG SER TRP ASN THR GLY PHE ASP SEQRES 15 B 451 TRP ILE THR ASP TYR GLN GLY LYS THR VAL TRP PHE VAL SEQRES 16 B 451 PRO SER ILE LYS ALA GLY ASN ASP ILE ALA ASN CYS LEU SEQRES 17 B 451 ARG LYS SER GLY LYS ARG VAL ILE GLN LEU SER ARG LYS SEQRES 18 B 451 THR PHE ASP THR GLU TYR PRO LYS THR LYS LEU THR ASP SEQRES 19 B 451 TRP ASP PHE VAL VAL THR THR ASP ILE SER GLU MET GLY SEQRES 20 B 451 ALA ASN PHE ARG ALA GLY ARG VAL ILE ASP PRO ARG ARG SEQRES 21 B 451 CYS LEU LYS PRO VAL ILE LEU THR ASP GLY PRO GLU ARG SEQRES 22 B 451 VAL ILE LEU ALA GLY PRO ILE PRO VAL THR PRO ALA SER SEQRES 23 B 451 ALA ALA GLN ARG ARG GLY ARG ILE GLY ARG ASN PRO ALA SEQRES 24 B 451 GLN GLU ASP ASP GLN TYR VAL PHE SER GLY ASP PRO LEU SEQRES 25 B 451 LYS ASN ASP GLU ASP HIS ALA HIS TRP THR GLU ALA LYS SEQRES 26 B 451 MET LEU LEU ASP ASN ILE TYR THR PRO GLU GLY ILE ILE SEQRES 27 B 451 PRO THR LEU PHE GLY PRO GLU ARG GLU LYS THR GLN ALA SEQRES 28 B 451 ILE ASP GLY GLU PHE ARG LEU ARG GLY GLU GLN ARG LYS SEQRES 29 B 451 THR PHE VAL GLU LEU MET ARG ARG GLY ASP LEU PRO VAL SEQRES 30 B 451 TRP LEU SER TYR LYS VAL ALA SER ALA GLY ILE SER TYR SEQRES 31 B 451 LYS ASP ARG GLU TRP CYS PHE THR GLY GLU ARG ASN ASN SEQRES 32 B 451 GLN ILE LEU GLU GLU ASN MET GLU VAL GLU ILE TRP THR SEQRES 33 B 451 ARG GLU GLY GLU LYS LYS LYS LEU ARG PRO LYS TRP LEU SEQRES 34 B 451 ASP ALA ARG VAL TYR ALA ASP PRO MET ALA LEU LYS ASP SEQRES 35 B 451 PHE LYS GLU PHE ALA SER GLY ARG LYS SEQRES 1 C 12 A G A C U A A C A A C U SEQRES 1 D 12 A G A C U A A C A A C U HET ADP A1619 27 HET VO4 A1620 5 HET MN A1621 1 HET ADP B1619 27 HET VO4 B1620 5 HET MN B1621 1 HET CL B1622 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM VO4 VANADATE ION HETNAM MN MANGANESE (II) ION HETNAM CL CHLORIDE ION FORMUL 5 ADP 2(C10 H15 N5 O10 P2) FORMUL 6 VO4 2(O4 V 3-) FORMUL 7 MN 2(MN 2+) FORMUL 11 CL CL 1- FORMUL 12 HOH *384(H2 O) HELIX 1 1 ASP A 179 ARG A 184 5 6 HELIX 2 2 ARG A 202 ARG A 214 1 13 HELIX 3 3 THR A 224 ARG A 236 1 13 HELIX 4 4 HIS A 262 SER A 271 1 10 HELIX 5 5 ASP A 290 MET A 306 1 17 HELIX 6 6 PHE A 348 TYR A 354 1 7 HELIX 7 7 SER A 364 LYS A 377 1 14 HELIX 8 8 THR A 389 THR A 400 1 12 HELIX 9 9 ASP A 409 GLU A 412 5 4 HELIX 10 10 THR A 450 GLY A 459 1 10 HELIX 11 11 ALA A 486 ASP A 496 1 11 HELIX 12 12 PHE A 509 ARG A 513 5 5 HELIX 13 13 GLY A 527 ARG A 539 1 13 HELIX 14 14 PRO A 543 ALA A 553 1 11 HELIX 15 15 ARG A 560 PHE A 564 5 5 HELIX 16 16 GLU A 567 GLN A 571 5 5 HELIX 17 17 ALA A 598 TYR A 601 5 4 HELIX 18 18 ASP A 603 GLY A 616 1 14 HELIX 19 19 ASP B 179 ARG B 184 5 6 HELIX 20 20 ARG B 202 ARG B 214 1 13 HELIX 21 21 THR B 224 ARG B 236 1 13 HELIX 22 22 HIS B 262 SER B 271 1 10 HELIX 23 23 ASP B 290 MET B 306 1 17 HELIX 24 24 PHE B 348 TYR B 354 1 7 HELIX 25 25 SER B 364 LYS B 377 1 14 HELIX 26 26 THR B 389 THR B 400 1 12 HELIX 27 27 ASP B 409 GLU B 412 5 4 HELIX 28 28 THR B 450 GLY B 459 1 10 HELIX 29 29 ALA B 486 ASP B 496 1 11 HELIX 30 30 PHE B 509 ARG B 513 5 5 HELIX 31 31 ARG B 526 ARG B 539 1 14 HELIX 32 32 PRO B 543 ALA B 553 1 11 HELIX 33 33 ARG B 560 PHE B 564 5 5 HELIX 34 34 GLU B 567 GLN B 571 5 5 HELIX 35 35 ALA B 598 TYR B 601 5 4 HELIX 36 36 ASP B 603 GLY B 616 1 14 SHEET 1 AA 6 LEU A 188 MET A 191 0 SHEET 2 AA 6 ALA A 310 MET A 314 1 O ALA A 311 N THR A 189 SHEET 3 AA 6 LEU A 280 ASP A 284 1 O ILE A 281 N ILE A 312 SHEET 4 AA 6 THR A 218 ALA A 222 1 O LEU A 219 N VAL A 282 SHEET 5 AA 6 VAL A 257 CYS A 261 1 O ASP A 258 N ILE A 220 SHEET 6 AA 6 ILE A 240 GLN A 243 1 O ARG A 241 N LEU A 259 SHEET 1 AB 6 ILE A 332 GLU A 336 0 SHEET 2 AB 6 ASP A 470 PHE A 474 1 O ASP A 470 N GLU A 333 SHEET 3 AB 6 ARG A 421 ASP A 424 1 O VAL A 422 N VAL A 473 SHEET 4 AB 6 THR A 358 PHE A 361 1 O VAL A 359 N ILE A 423 SHEET 5 AB 6 PHE A 404 THR A 407 1 O VAL A 405 N TRP A 360 SHEET 6 AB 6 VAL A 382 LEU A 385 1 O ILE A 383 N VAL A 406 SHEET 1 AC 2 ARG A 427 LEU A 434 0 SHEET 2 AC 2 ARG A 440 PRO A 448 -1 O ARG A 440 N LEU A 434 SHEET 1 AD 2 LEU A 573 GLU A 574 0 SHEET 2 AD 2 MET A 577 GLU A 578 -1 O MET A 577 N GLU A 574 SHEET 1 AE 2 GLU A 580 TRP A 582 0 SHEET 2 AE 2 LYS A 588 LYS A 590 -1 O LYS A 589 N ILE A 581 SHEET 1 BA 6 LEU B 188 MET B 191 0 SHEET 2 BA 6 ALA B 310 MET B 314 1 O ALA B 311 N THR B 189 SHEET 3 BA 6 LEU B 280 ASP B 284 1 O ILE B 281 N ILE B 312 SHEET 4 BA 6 THR B 218 ALA B 222 1 O LEU B 219 N VAL B 282 SHEET 5 BA 6 VAL B 257 CYS B 261 1 O ASP B 258 N ILE B 220 SHEET 6 BA 6 ILE B 240 GLN B 243 1 O ARG B 241 N LEU B 259 SHEET 1 BB 6 ILE B 332 GLU B 336 0 SHEET 2 BB 6 ASP B 470 PHE B 474 1 O ASP B 470 N GLU B 333 SHEET 3 BB 6 ARG B 421 ASP B 424 1 O VAL B 422 N VAL B 473 SHEET 4 BB 6 THR B 358 PHE B 361 1 O VAL B 359 N ILE B 423 SHEET 5 BB 6 PHE B 404 THR B 407 1 O VAL B 405 N TRP B 360 SHEET 6 BB 6 VAL B 382 LEU B 385 1 O ILE B 383 N VAL B 406 SHEET 1 BC 2 ARG B 427 LEU B 434 0 SHEET 2 BC 2 ARG B 440 PRO B 448 -1 O ARG B 440 N LEU B 434 SHEET 1 BD 2 LEU B 573 GLU B 574 0 SHEET 2 BD 2 MET B 577 GLU B 578 -1 O MET B 577 N GLU B 574 SHEET 1 BE 2 GLU B 580 TRP B 582 0 SHEET 2 BE 2 LYS B 588 LYS B 590 -1 O LYS B 589 N ILE B 581 LINK OG1 THR A 200 MN MN A1621 1555 1555 2.21 LINK O3B ADP A1619 V VO4 A1620 1555 1555 2.50 LINK O1B ADP A1619 MN MN A1621 1555 1555 1.93 LINK O4 VO4 A1620 MN MN A1621 1555 1555 1.75 LINK MN MN A1621 O HOH A2196 1555 1555 2.41 LINK MN MN A1621 O HOH A2197 1555 1555 2.27 LINK MN MN A1621 O HOH A2198 1555 1555 2.03 LINK OG1 THR B 200 MN MN B1621 1555 1555 2.11 LINK O3B ADP B1619 V VO4 B1620 1555 1555 2.56 LINK O1B ADP B1619 MN MN B1621 1555 1555 2.16 LINK O3 VO4 B1620 MN MN B1621 1555 1555 1.61 LINK MN MN B1621 O HOH B2170 1555 1555 2.01 LINK MN MN B1621 O HOH B2171 1555 1555 2.05 LINK MN MN B1621 O HOH B2172 1555 1555 2.34 CISPEP 1 GLY A 445 PRO A 446 0 -1.98 CISPEP 2 GLY B 445 PRO B 446 0 2.41 SITE 1 AC1 14 GLY A 196 ALA A 197 GLY A 198 LYS A 199 SITE 2 AC1 14 THR A 200 LYS A 201 GLU A 233 ASN A 329 SITE 3 AC1 14 ASN A 416 ARG A 418 ARG A 463 VO4 A1620 SITE 4 AC1 14 MN A1621 HOH A2198 SITE 1 AC2 14 GLY B 196 ALA B 197 GLY B 198 LYS B 199 SITE 2 AC2 14 THR B 200 LYS B 201 ASN B 329 ASN B 416 SITE 3 AC2 14 ARG B 418 ARG B 463 VO4 B1620 MN B1621 SITE 4 AC2 14 CL B1622 HOH B2170 SITE 1 AC3 14 PRO A 195 GLY A 196 LYS A 199 GLU A 285 SITE 2 AC3 14 ALA A 316 GLY A 414 GLN A 456 ARG A 460 SITE 3 AC3 14 ARG A 463 ADP A1619 MN A1621 HOH A2042 SITE 4 AC3 14 HOH A2197 HOH A2198 SITE 1 AC4 15 PRO B 195 GLY B 196 LYS B 199 GLU B 285 SITE 2 AC4 15 ALA B 316 GLY B 414 GLN B 456 ARG B 460 SITE 3 AC4 15 ARG B 463 ADP B1619 MN B1621 HOH B2028 SITE 4 AC4 15 HOH B2170 HOH B2171 HOH B2172 SITE 1 AC5 7 THR A 200 GLU A 285 ADP A1619 VO4 A1620 SITE 2 AC5 7 HOH A2196 HOH A2197 HOH A2198 SITE 1 AC6 7 THR B 200 GLU B 285 ADP B1619 VO4 B1620 SITE 2 AC6 7 HOH B2170 HOH B2171 HOH B2172 SITE 1 AC7 5 ASN B 416 ARG B 418 ARG B 463 ADP B1619 SITE 2 AC7 5 HOH B2106 CRYST1 132.537 105.207 72.352 90.00 117.62 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007545 0.000000 0.003948 0.00000 SCALE2 0.000000 0.009505 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015599 0.00000