HEADER SIGNALING PROTEIN 02-NOV-06 2JMC TITLE CHIMER BETWEEN SPC-SH3 AND P41 COMPND MOL_ID: 1; COMPND 2 MOLECULE: SPECTRIN ALPHA CHAIN, BRAIN AND P41 PEPTIDE CHIMERA; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: SPECTRIN, NON-ERYTHROID ALPHA CHAIN, FODRIN ALPHA CHAIN; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: GALLUS GALLUS; SOURCE 3 ORGANISM_COMMON: CHICKEN; SOURCE 4 ORGANISM_TAXID: 9031; SOURCE 5 GENE: SPTAN1, SPTA2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PETM11 KEYWDS CHIMER, SPC-SH3, P41, SIGNALING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR N.A.J.VAN NULAND,A.M.CANDEL,J.C.MARTINEZ,F.CONEJERO-LARA,M.BRUIX REVDAT 4 20-DEC-23 2JMC 1 REMARK REVDAT 3 09-MAR-22 2JMC 1 REMARK SEQADV REVDAT 2 24-FEB-09 2JMC 1 VERSN REVDAT 1 24-APR-07 2JMC 0 JRNL AUTH A.M.CANDEL,F.CONEJERO-LARA,J.C.MARTINEZ,N.A.J.VAN NULAND, JRNL AUTH 2 M.BRUIX JRNL TITL THE HIGH-RESOLUTION NMR STRUCTURE OF A SINGLE-CHAIN CHIMERIC JRNL TITL 2 PROTEIN MIMICKING A SH3-PEPTIDE COMPLEX JRNL REF FEBS LETT. V. 581 687 2007 JRNL REFN ISSN 0014-5793 JRNL PMID 17275816 JRNL DOI 10.1016/J.FEBSLET.2007.01.032 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : SPARKY, CYANA REMARK 3 AUTHORS : GODDARD (SPARKY), GUNTERT, MUMENTHALER AND REMARK 3 WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JMC COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-NOV-06. REMARK 100 THE DEPOSITION ID IS D_1000100012. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303.150000 REMARK 210 PH : 3.5 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM [U-98% 13C; U-98% 15N] REMARK 210 SPCP41, 20 MM GLYCINE, 90% H2O, REMARK 210 10% D2O; 1 MM [U-98% 15N] SPCP41, REMARK 210 20 MM GLYCINE, 90% H2O, 10% D2O; REMARK 210 1 MM SPCP41, 20 MM GLYCINE, 90% REMARK 210 H2O, 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HNCO; 3D HN(CO)CA; 3D 1H-15N REMARK 210 NOESY; 3D 1H-15N TOCSY; 2D 1H-1H REMARK 210 NOESY; 2D 1H-15N HSQC; 3D HCCH- REMARK 210 TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; UNIFORM NMR SYSTEM REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, CYANA, XWINNMR, TOPSPIN, REMARK 210 VNMRJ, NMRPIPE, NMRVIEW REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LEU A 18 71.47 -67.20 REMARK 500 1 LEU A 19 -177.08 -57.02 REMARK 500 1 ASN A 20 102.75 -43.34 REMARK 500 1 ASN A 32 -72.66 65.26 REMARK 500 1 ASP A 66 104.67 -36.39 REMARK 500 1 PRO A 69 80.02 -69.76 REMARK 500 2 PRO A 5 1.79 -69.74 REMARK 500 2 ARG A 6 102.96 -35.98 REMARK 500 2 LEU A 18 75.74 -60.35 REMARK 500 2 LEU A 19 -177.13 -63.30 REMARK 500 2 ASN A 32 -72.38 68.52 REMARK 500 2 ASP A 66 104.54 -36.50 REMARK 500 2 PRO A 69 83.11 -69.83 REMARK 500 3 MET A 3 -70.69 -115.10 REMARK 500 3 LEU A 18 70.54 -68.23 REMARK 500 3 LEU A 19 -177.16 -56.37 REMARK 500 3 ASN A 20 106.94 -43.32 REMARK 500 3 ASN A 32 -71.53 70.27 REMARK 500 3 THR A 50 -37.87 -139.83 REMARK 500 3 ASP A 66 104.59 -36.27 REMARK 500 3 PRO A 69 80.74 -69.82 REMARK 500 4 MET A 3 -71.17 -88.64 REMARK 500 4 LYS A 12 111.75 -39.45 REMARK 500 4 LEU A 18 71.09 -67.65 REMARK 500 4 LEU A 19 -177.04 -57.35 REMARK 500 4 ASN A 20 104.35 -43.15 REMARK 500 4 LYS A 24 -60.25 -91.77 REMARK 500 4 ASN A 32 -72.93 65.10 REMARK 500 4 ASP A 66 104.43 -36.28 REMARK 500 4 PRO A 69 80.04 -69.72 REMARK 500 5 MET A 3 -75.10 -111.30 REMARK 500 5 PRO A 5 2.93 -69.82 REMARK 500 5 ARG A 6 99.65 -44.12 REMARK 500 5 LYS A 12 113.89 -37.84 REMARK 500 5 LEU A 18 71.08 -68.03 REMARK 500 5 LEU A 19 -177.53 -57.37 REMARK 500 5 ASN A 20 105.84 -43.71 REMARK 500 5 ASN A 32 -70.03 70.97 REMARK 500 5 THR A 50 -35.15 -133.96 REMARK 500 5 ASP A 66 104.58 -36.36 REMARK 500 5 PRO A 69 87.10 -69.67 REMARK 500 6 MET A 3 145.88 -34.45 REMARK 500 6 PRO A 5 2.95 -69.75 REMARK 500 6 ARG A 6 105.82 -34.36 REMARK 500 6 LEU A 18 75.25 -61.33 REMARK 500 6 LEU A 19 -177.19 -60.60 REMARK 500 6 ASN A 20 107.01 -43.26 REMARK 500 6 ASN A 32 -67.77 72.06 REMARK 500 6 LYS A 44 142.57 -172.36 REMARK 500 6 ASP A 66 104.36 -36.34 REMARK 500 REMARK 500 THIS ENTRY HAS 171 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1TUC RELATED DB: PDB REMARK 900 RELATED ID: 2JMA RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE AUTHOR STATES THAT THE CHIMERA IS BASED ON A CIRCULAR REMARK 999 PERMUTANT OF ALPHA-SPECTRIN SH3, NAMED S19P20S FROM PDB REMARK 999 ENTRY 1TUC. THE ORIGINAL N- AND C-TERMINUS OF REMARK 999 ALPHA-SPECTRIN ARE CONNECTED AND NEW N- AND C-TERMINI ARE REMARK 999 INTRODUCED. RESIDUES 5-47 CORRESPOND TO RESIDUES 20-62 IN REMARK 999 PDB ENTRY 1TUC. RESIDUES 50-63 CORRESPOND TO RESIDUES 4-17 REMARK 999 IN PDB ENTRY 1TUC. S64 CORRESPONDS TO RESIDUE 19 FROM PDB REMARK 999 ENTRY 1TUC. RESIDUES 68-77 CORRESPOND TO P41 PEPTIDE, SEE REMARK 999 PDB ENTRY 2JMA. DBREF 2JMC A 5 47 UNP P07751 SPTA2_CHICK 983 1025 DBREF 2JMC A 50 63 UNP P07751 SPTA2_CHICK 967 980 SEQADV 2JMC GLY A 1 UNP P07751 CLONING ARTIFACT SEQADV 2JMC ALA A 2 UNP P07751 CLONING ARTIFACT SEQADV 2JMC MET A 3 UNP P07751 CLONING ARTIFACT SEQADV 2JMC GLY A 4 UNP P07751 CLONING ARTIFACT SEQADV 2JMC SER A 48 UNP P07751 LINKER SEQADV 2JMC GLY A 49 UNP P07751 LINKER SEQADV 2JMC SER A 64 UNP P07751 SEE REMARK 999 SEQADV 2JMC GLY A 65 UNP P07751 LINKER SEQADV 2JMC ASP A 66 UNP P07751 LINKER SEQADV 2JMC ASN A 67 UNP P07751 LINKER SEQADV 2JMC ALA A 68 UNP P07751 SEE REMARK 999 SEQADV 2JMC PRO A 69 UNP P07751 SEE REMARK 999 SEQADV 2JMC SER A 70 UNP P07751 SEE REMARK 999 SEQADV 2JMC TYR A 71 UNP P07751 SEE REMARK 999 SEQADV 2JMC SER A 72 UNP P07751 SEE REMARK 999 SEQADV 2JMC PRO A 73 UNP P07751 SEE REMARK 999 SEQADV 2JMC PRO A 74 UNP P07751 SEE REMARK 999 SEQADV 2JMC PRO A 75 UNP P07751 SEE REMARK 999 SEQADV 2JMC PRO A 76 UNP P07751 SEE REMARK 999 SEQADV 2JMC PRO A 77 UNP P07751 SEE REMARK 999 SEQRES 1 A 77 GLY ALA MET GLY PRO ARG GLU VAL THR MET LYS LYS GLY SEQRES 2 A 77 ASP ILE LEU THR LEU LEU ASN SER THR ASN LYS ASP TRP SEQRES 3 A 77 TRP LYS VAL GLU VAL ASN ASP ARG GLN GLY PHE VAL PRO SEQRES 4 A 77 ALA ALA TYR VAL LYS LYS LEU ASP SER GLY THR GLY LYS SEQRES 5 A 77 GLU LEU VAL LEU ALA LEU TYR ASP TYR GLN GLU SER GLY SEQRES 6 A 77 ASP ASN ALA PRO SER TYR SER PRO PRO PRO PRO PRO HELIX 1 1 PRO A 39 ALA A 41 5 3 SHEET 1 A 3 ILE A 15 THR A 17 0 SHEET 2 A 3 LEU A 54 ALA A 57 -1 O VAL A 55 N LEU A 16 SHEET 3 A 3 VAL A 43 LYS A 45 -1 N LYS A 44 O LEU A 56 SHEET 1 B 2 VAL A 29 VAL A 31 0 SHEET 2 B 2 ARG A 34 GLY A 36 -1 N ARG A 34 O VAL A 31 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1