HEADER DNA BINDING PROTEIN 11-DEC-06 2JMW TITLE STRUCTURE OF DNA-BINDING DOMAIN OF ARABIDOPSIS GT-1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: DNA BINDING PROTEIN GT-1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: RESIDUES 81-166; COMPND 5 SYNONYM: HYPOTHETICAL PROTEIN AT1G13450; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; SOURCE 3 ORGANISM_COMMON: THALE CRESS; SOURCE 4 ORGANISM_TAXID: 3702; SOURCE 5 GENE: T6J4.18; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET3A KEYWDS DNA-BINDING DOMAIN, PHOSPHORYLATION, DNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR T.NAGATA,E.NIYADA,K.NOTO,Y.IKEDA,Y.YAMAMOTO,S.UESUGI,J.MURATA, AUTHOR 2 K.HIRATSUKA,M.KATAHIRA REVDAT 5 20-DEC-23 2JMW 1 REMARK REVDAT 4 29-SEP-10 2JMW 1 JRNL REVDAT 3 25-AUG-10 2JMW 1 JRNL REVDAT 2 24-FEB-09 2JMW 1 VERSN REVDAT 1 11-DEC-07 2JMW 0 JRNL AUTH T.NAGATA,E.NIYADA,N.FUJIMOTO,Y.NAGASAKI,K.NOTO,Y.MIYANOIRI, JRNL AUTH 2 J.MURATA,K.HIRATSUKA,M.KATAHIRA JRNL TITL SOLUTION STRUCTURES OF THE TRIHELIX DNA-BINDING DOMAINS OF JRNL TITL 2 THE WILD-TYPE AND A PHOSPHOMIMETIC MUTANT OF ARABIDOPSIS JRNL TITL 3 GT-1: MECHANISM FOR AN INCREASE IN DNA-BINDING AFFINITY JRNL TITL 4 THROUGH PHOSPHORYLATION. JRNL REF PROTEINS V. 78 3033 2010 JRNL REFN ISSN 0887-3585 JRNL PMID 20717979 JRNL DOI 10.1002/PROT.22827 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0.17, CYANA 2.0.17 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JMW COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-DEC-06. REMARK 100 THE DEPOSITION ID IS D_1000100032. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 120 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C, U-100% 15N] GT REMARK 210 -1, 20 MM SODIUM PHOSPHATE, 100 REMARK 210 MM SODIUM CHLORIDE, 10 MM [U-100% REMARK 210 2H] DTT, 1 MM SODIUM AZIDE, 1 REMARK 210 MM DSS, 95% H2O, 5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : KUJIRA 0.9820, NMRVIEW 5.0.4, REMARK 210 NMRPIPE, XWINNMR 3.5 REMARK 210 METHOD USED : SIMULATED ANNEALING, TORSION REMARK 210 ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 149 152.31 -49.45 REMARK 500 1 LYS A 150 160.22 -39.51 REMARK 500 1 ASP A 153 139.30 -35.39 REMARK 500 2 ALA A 84 137.85 -172.00 REMARK 500 2 GLU A 85 49.36 -84.78 REMARK 500 2 THR A 108 35.11 -84.62 REMARK 500 2 SER A 109 114.23 -169.46 REMARK 500 2 ALA A 149 37.91 -82.80 REMARK 500 2 LYS A 150 161.52 -40.19 REMARK 500 2 LYS A 160 39.19 39.62 REMARK 500 3 THR A 108 33.03 -86.21 REMARK 500 3 SER A 109 117.19 -164.34 REMARK 500 3 ALA A 149 168.99 -48.65 REMARK 500 3 HIS A 151 -55.30 -128.87 REMARK 500 3 SER A 158 47.36 -82.54 REMARK 500 3 LYS A 165 172.89 -50.17 REMARK 500 4 SER A 109 140.33 -174.95 REMARK 500 4 LYS A 165 120.80 -35.91 REMARK 500 5 GLU A 85 44.34 38.73 REMARK 500 5 THR A 108 49.95 -83.08 REMARK 500 5 SER A 109 109.56 -170.72 REMARK 500 5 ASN A 112 30.10 -88.37 REMARK 500 5 ALA A 149 154.27 -44.11 REMARK 500 5 HIS A 152 108.99 -37.97 REMARK 500 5 LYS A 160 101.78 -36.53 REMARK 500 5 MET A 161 121.49 -174.67 REMARK 500 5 SER A 162 117.44 -169.49 REMARK 500 6 ARG A 83 35.38 -92.90 REMARK 500 6 GLU A 85 -33.34 -131.64 REMARK 500 6 ILE A 96 -73.13 -56.63 REMARK 500 6 ALA A 149 94.27 -55.05 REMARK 500 6 LYS A 160 -62.02 -123.39 REMARK 500 6 SER A 162 125.25 -38.44 REMARK 500 6 LYS A 165 57.90 -101.96 REMARK 500 7 SER A 109 143.49 -172.73 REMARK 500 7 ALA A 149 178.46 -57.79 REMARK 500 7 HIS A 152 107.55 -173.77 REMARK 500 7 ASP A 153 106.63 -170.40 REMARK 500 7 LYS A 165 150.92 -42.30 REMARK 500 8 ARG A 83 50.14 -94.23 REMARK 500 8 SER A 109 123.80 -170.24 REMARK 500 8 ASN A 112 34.84 -88.56 REMARK 500 8 SER A 162 -55.08 -120.63 REMARK 500 9 ARG A 83 100.34 -59.55 REMARK 500 9 THR A 86 -40.26 -133.64 REMARK 500 9 SER A 109 126.63 -174.63 REMARK 500 9 ASN A 112 31.64 -90.37 REMARK 500 9 LYS A 150 167.00 -43.04 REMARK 500 9 HIS A 151 140.55 -34.00 REMARK 500 9 HIS A 152 162.85 -46.55 REMARK 500 REMARK 500 THIS ENTRY HAS 100 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2JMW A 81 166 UNP Q9FX53 Q9FX53_ARATH 81 166 SEQRES 1 A 86 LYS LYS ARG ALA GLU THR TRP VAL GLN ASP GLU THR ARG SEQRES 2 A 86 SER LEU ILE MET PHE ARG ARG GLY MET ASP GLY LEU PHE SEQRES 3 A 86 ASN THR SER LYS SER ASN LYS HIS LEU TRP GLU GLN ILE SEQRES 4 A 86 SER SER LYS MET ARG GLU LYS GLY PHE ASP ARG SER PRO SEQRES 5 A 86 THR MET CYS THR ASP LYS TRP ARG ASN LEU LEU LYS GLU SEQRES 6 A 86 PHE LYS LYS ALA LYS HIS HIS ASP ARG GLY ASN GLY SER SEQRES 7 A 86 ALA LYS MET SER TYR TYR LYS GLU HELIX 1 1 VAL A 88 SER A 109 1 22 HELIX 2 2 ASN A 112 GLY A 127 1 16 HELIX 3 3 SER A 131 ALA A 149 1 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1