HEADER LIGAND BINDING PROTEIN 02-FEB-07 2JNT TITLE STRUCTURE OF BOMBYX MORI CHEMOSENSORY PROTEIN 1 IN SOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHEMOSENSORY PROTEIN CSP1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: SEQUENCE DATABASE RESIDUES 20-127; COMPND 5 SYNONYM: CHEMOSENSORY PROTEIN 4, HYPOTHETICAL PROTEIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BOMBYX MORI; SOURCE 3 ORGANISM_COMMON: DOMESTIC SILKWORM; SOURCE 4 ORGANISM_TAXID: 7091; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PET32A KEYWDS BMORCSP1, CSP1, LIGAND BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR S.JANSEN,L.ZIDEK,J.CHMELIK,P.NOVAK,P.PADRTA,J.PICIMBON,C.LOFSTEDT, AUTHOR 2 V.SKLENAR REVDAT 5 20-DEC-23 2JNT 1 REMARK REVDAT 4 14-JUN-23 2JNT 1 REMARK REVDAT 3 05-FEB-20 2JNT 1 REMARK REVDAT 2 24-FEB-09 2JNT 1 VERSN REVDAT 1 20-NOV-07 2JNT 0 JRNL AUTH S.JANSEN,J.CHMELIK,L.ZIDEK,P.PADRTA,P.NOVAK,Z.ZDRAHAL, JRNL AUTH 2 J.-F.PICIMBON,C.LOFSTEDT,V.SKLENAR JRNL TITL STRUCTURE OF BOMBYX MORI CHEMOSENSORY PROTEIN 1 IN SOLUTION JRNL REF ARCH.INSECT BIOCHEM.PHYSIOL. V. 66 135 2007 JRNL REFN ISSN 0739-4462 JRNL PMID 17966128 JRNL DOI 10.1002/ARCH.20205 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE, ARIA 2.0A REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 (NMRPIPE), LINGE, O'DONOGHUE AND NILGES (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JNT COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-FEB-07. REMARK 100 THE DEPOSITION ID IS D_1000100065. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : NULL REMARK 210 SAMPLE CONTENTS : 1.0 MM [U-95% 13C; U-90% 15N] REMARK 210 CHEMOSENSORY PROTEIN 1, 20 MM REMARK 210 SODIUM PHOSPHATE, 0.05 MM SODIUM REMARK 210 AZIDE, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 1H15N HSQC; HNCA; HN(CO)CA; REMARK 210 HNCACB; CBCA(CO)NH; HCCH TOCSY; REMARK 210 13C15N EDITED NOESY; HNCO; HCCH_ REMARK 210 TOCSY; 13C15N_EDITED_NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY 3.110, ARIA 2.0A, MOLMOL, REMARK 210 TALOS REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 750 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 6 CYS A 26 CA - CB - SG ANGL. DEV. = 6.8 DEGREES REMARK 500 9 TYR A 23 CB - CG - CD1 ANGL. DEV. = 4.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 2 32.21 -95.78 REMARK 500 1 TYR A 5 -51.89 55.31 REMARK 500 1 LYS A 7 -78.35 -158.41 REMARK 500 1 ILE A 8 41.24 -80.36 REMARK 500 1 LEU A 10 -64.40 -129.46 REMARK 500 1 LYS A 30 -72.12 -144.22 REMARK 500 1 GLU A 49 -101.98 -107.96 REMARK 500 1 CYS A 55 -103.49 -69.54 REMARK 500 1 ASN A 73 -55.91 -139.80 REMARK 500 1 GLU A 74 74.12 -103.53 REMARK 500 1 PHE A 85 -65.44 -91.91 REMARK 500 1 TRP A 91 31.28 -84.49 REMARK 500 2 THR A 2 81.13 166.05 REMARK 500 2 TYR A 5 19.39 54.45 REMARK 500 2 ASP A 6 -75.92 -104.18 REMARK 500 2 LYS A 7 -67.23 -163.84 REMARK 500 2 ILE A 8 44.22 -83.14 REMARK 500 2 LYS A 30 -71.35 -102.67 REMARK 500 2 GLU A 49 -94.09 -104.09 REMARK 500 2 LYS A 54 19.48 -67.20 REMARK 500 2 CYS A 55 -96.68 -80.29 REMARK 500 2 ASN A 73 -57.38 -136.41 REMARK 500 2 GLU A 74 51.57 -108.31 REMARK 500 2 ASP A 86 86.50 -151.37 REMARK 500 2 TRP A 91 -66.04 69.24 REMARK 500 3 ASP A 3 -44.60 72.23 REMARK 500 3 TYR A 5 -38.97 64.41 REMARK 500 3 LYS A 7 -102.31 -154.89 REMARK 500 3 ILE A 8 39.78 -92.32 REMARK 500 3 LYS A 30 -70.94 -107.54 REMARK 500 3 GLU A 49 -55.48 -142.30 REMARK 500 3 CYS A 55 -88.13 -59.57 REMARK 500 3 ASN A 73 -57.93 -142.18 REMARK 500 3 PHE A 85 -68.21 -97.80 REMARK 500 3 ASP A 86 88.23 -153.84 REMARK 500 3 LYS A 90 -72.98 -77.66 REMARK 500 3 TRP A 91 -59.86 60.47 REMARK 500 3 PRO A 107 107.46 -58.12 REMARK 500 4 LYS A 4 144.04 67.21 REMARK 500 4 TYR A 5 -57.52 56.84 REMARK 500 4 LYS A 7 -142.97 -131.60 REMARK 500 4 ILE A 8 40.52 -59.16 REMARK 500 4 LYS A 30 -75.96 -119.41 REMARK 500 4 TRP A 91 -73.74 65.55 REMARK 500 5 THR A 2 87.08 -150.64 REMARK 500 5 ASP A 3 -30.64 -133.87 REMARK 500 5 TYR A 5 24.86 49.44 REMARK 500 5 ASP A 6 -71.64 -110.34 REMARK 500 5 LYS A 7 -79.62 -166.61 REMARK 500 5 ILE A 8 39.99 -81.50 REMARK 500 REMARK 500 THIS ENTRY HAS 108 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 2 ARG A 98 0.09 SIDE CHAIN REMARK 500 8 ARG A 92 0.10 SIDE CHAIN REMARK 500 9 ARG A 98 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 6943 RELATED DB: BMRB REMARK 900 ENTRY CONTAINING RESONANCE ASSIGNMENT FOR THIS MOLECULAR SYSTEM DBREF 2JNT A 1 108 UNP Q8MMK7 Q8MMK7_BOMMO 20 127 SEQRES 1 A 108 TYR THR ASP LYS TYR ASP LYS ILE ASN LEU GLN GLU ILE SEQRES 2 A 108 LEU GLU ASN LYS ARG LEU LEU GLU SER TYR MET ASP CYS SEQRES 3 A 108 VAL LEU GLY LYS GLY LYS CYS THR PRO GLU GLY LYS GLU SEQRES 4 A 108 LEU LYS ASP HIS LEU GLN GLU ALA LEU GLU THR GLY CYS SEQRES 5 A 108 GLU LYS CYS THR GLU ALA GLN GLU LYS GLY ALA GLU THR SEQRES 6 A 108 SER ILE ASP TYR LEU ILE LYS ASN GLU LEU GLU ILE TRP SEQRES 7 A 108 LYS GLU LEU THR ALA HIS PHE ASP PRO ASP GLY LYS TRP SEQRES 8 A 108 ARG LYS LYS TYR GLU ASP ARG ALA LYS ALA LYS GLY ILE SEQRES 9 A 108 VAL ILE PRO GLU HELIX 1 1 LEU A 10 GLU A 15 1 6 HELIX 2 2 ASN A 16 LEU A 28 1 13 HELIX 3 3 THR A 34 GLU A 49 1 16 HELIX 4 4 THR A 56 ASN A 73 1 18 HELIX 5 5 GLU A 74 ASP A 86 1 13 HELIX 6 6 TRP A 91 GLY A 103 1 13 SSBOND 1 CYS A 26 CYS A 33 1555 1555 2.01 SSBOND 2 CYS A 52 CYS A 55 1555 1555 2.02 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1