HEADER    CELL INVASION, SIGNALING PROTEIN        14-MAR-07   2JOK              
TITLE     NMR STRUCTURE OF THE CATALYTIC DOMAIN OF GUANINE NUCLEOTIDE EXCHANGE  
TITLE    2 FACTOR BOPE FROM BURKHOLDERIA PSEUDOMALLEI                           
COMPND    MOL_ID: 1;                                                            
COMPND   2 MOLECULE: PUTATIVE G-NUCLEOTIDE EXCHANGE FACTOR;                     
COMPND   3 CHAIN: A;                                                            
COMPND   4 FRAGMENT: RESIDUES 78-261;                                           
COMPND   5 ENGINEERED: YES                                                      
SOURCE    MOL_ID: 1;                                                            
SOURCE   2 ORGANISM_SCIENTIFIC: BURKHOLDERIA PSEUDOMALLEI;                      
SOURCE   3 ORGANISM_TAXID: 28450;                                               
SOURCE   4 GENE: BOPE;                                                          
SOURCE   5 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3);                       
SOURCE   6 EXPRESSION_SYSTEM_TAXID: 469008;                                     
SOURCE   7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3);                                 
SOURCE   8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR;                               
SOURCE   9 EXPRESSION_SYSTEM_VECTOR: PGEX                                       
KEYWDS    GUANINE NUCLEOTIDE EXCHANGE FACTOR, BURKHOLDERIA PSEUDOMALLEI, TYPE   
KEYWDS   2 III SECRETION, SOPE, SOPE2, CELL INVASION, SIGNALING PROTEIN         
EXPDTA    SOLUTION NMR                                                          
NUMMDL    20                                                                    
AUTHOR    H.WU,A.UPADHYAY,C.WILLIAMS,E.E.GALYOV,J.M.H.VAN DEN ELSEN,S.BAGBY     
REVDAT   5   20-DEC-23 2JOK    1       REMARK                                   
REVDAT   4   09-MAR-22 2JOK    1       REMARK SEQADV                            
REVDAT   3   24-FEB-09 2JOK    1       VERSN                                    
REVDAT   2   29-APR-08 2JOK    1       JRNL                                     
REVDAT   1   18-SEP-07 2JOK    0                                                
JRNL        AUTH   A.UPADHYAY,H.L.WU,C.WILLIAMS,T.FIELD,E.E.GALYOV,             
JRNL        AUTH 2 J.M.VAN DEN ELSEN,S.BAGBY                                    
JRNL        TITL   THE GUANINE-NUCLEOTIDE-EXCHANGE FACTOR BOPE FROM             
JRNL        TITL 2 BURKHOLDERIA PSEUDOMALLEI ADOPTS A COMPACT VERSION OF THE    
JRNL        TITL 3 SALMONELLA SOPE/SOPE2 FOLD AND UNDERGOES A CLOSED-TO-OPEN    
JRNL        TITL 4 CONFORMATIONAL CHANGE UPON INTERACTION WITH CDC42            
JRNL        REF    BIOCHEM.J.                    V. 411   485 2008              
JRNL        REFN                   ISSN 0264-6021                               
JRNL        PMID   18052936                                                     
JRNL        DOI    10.1042/BJ20071546                                           
REMARK   2                                                                      
REMARK   2 RESOLUTION. NOT APPLICABLE.                                          
REMARK   3                                                                      
REMARK   3 REFINEMENT.                                                          
REMARK   3   PROGRAM     : SPARKY, X-PLOR NIH                                   
REMARK   3   AUTHORS     : GODDARD (SPARKY), SCHWIETERS, KUSZEWSKI, TJANDRA     
REMARK   3                 AND CLORE (X-PLOR NIH)                               
REMARK   3                                                                      
REMARK   3  OTHER REFINEMENT REMARKS: NULL                                      
REMARK   4                                                                      
REMARK   4 2JOK COMPLIES WITH FORMAT V. 3.15, 01-DEC-08                         
REMARK 100                                                                      
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-MAR-07.                  
REMARK 100 THE DEPOSITION ID IS D_1000100092.                                   
REMARK 210                                                                      
REMARK 210 EXPERIMENTAL DETAILS                                                 
REMARK 210  EXPERIMENT TYPE                : NMR                                
REMARK 210  TEMPERATURE           (KELVIN) : 298                                
REMARK 210  PH                             : 5.5                                
REMARK 210  IONIC STRENGTH                 : 100                                
REMARK 210  PRESSURE                       : AMBIENT                            
REMARK 210  SAMPLE CONTENTS                : 0.8 MM PROTEIN, 20 MM POTASSIUM    
REMARK 210                                   PHOSPHATE, 50 MM SODIUM CHLORIDE,  
REMARK 210                                   10 MM DTT, 1 MM BENZAMIDINE, 90%   
REMARK 210                                   H2O/10% D2O                        
REMARK 210                                                                      
REMARK 210  NMR EXPERIMENTS CONDUCTED      : 2D 1H-15N HSQC; 2D 1H-13C HSQC;    
REMARK 210                                   2D 1H-1H TOCSY; 2D 1H-1H NOESY;    
REMARK 210                                   3D CBCA(CO)NH; 3D C(CO)NH; 3D      
REMARK 210                                   HNCO; 3D HNCA; 3D HNCACB; 3D       
REMARK 210                                   HBHA(CO)NH; 3D HN(CO)CA; 3D        
REMARK 210                                   H(CCO)NH; 3D HCCH-TOCSY; 3D HNHA;  
REMARK 210                                   3D 1H-15N NOESY; 3D 1H-15N         
REMARK 210                                   TOCSY; 3D 1H-13C NOESY; IPAP-HSQC  
REMARK 210  SPECTROMETER FIELD STRENGTH    : 600 MHZ                            
REMARK 210  SPECTROMETER MODEL             : INOVA                              
REMARK 210  SPECTROMETER MANUFACTURER      : VARIAN                             
REMARK 210                                                                      
REMARK 210  STRUCTURE DETERMINATION.                                            
REMARK 210   SOFTWARE USED                 : NMRPIPE, X-PLOR NIH, TALOS         
REMARK 210   METHOD USED                   : SIMULATED ANNEALING                
REMARK 210                                                                      
REMARK 210 CONFORMERS, NUMBER CALCULATED   : 40                                 
REMARK 210 CONFORMERS, NUMBER SUBMITTED    : 20                                 
REMARK 210 CONFORMERS, SELECTION CRITERIA  : STRUCTURES WITH THE LOWEST         
REMARK 210                                   ENERGY                             
REMARK 210                                                                      
REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1                   
REMARK 210                                                                      
REMARK 210 REMARK: NULL                                                         
REMARK 215                                                                      
REMARK 215 NMR STUDY                                                            
REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION           
REMARK 215 NMR DATA.  PROTEIN DATA BANK CONVENTIONS REQUIRE THAT                
REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON              
REMARK 215 THESE RECORDS ARE MEANINGLESS.                                       
REMARK 300                                                                      
REMARK 300 BIOMOLECULE: 1                                                       
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM                
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN                  
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON               
REMARK 300 BURIED SURFACE AREA.                                                 
REMARK 350                                                                      
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN           
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE                
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS          
REMARK 350 GIVEN BELOW.  BOTH NON-CRYSTALLOGRAPHIC AND                          
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.                               
REMARK 350                                                                      
REMARK 350 BIOMOLECULE: 1                                                       
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC                         
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A                                     
REMARK 350   BIOMT1   1  1.000000  0.000000  0.000000        0.00000            
REMARK 350   BIOMT2   1  0.000000  1.000000  0.000000        0.00000            
REMARK 350   BIOMT3   1  0.000000  0.000000  1.000000        0.00000            
REMARK 465                                                                      
REMARK 465 MISSING RESIDUES                                                     
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE                       
REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER;                   
REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)                            
REMARK 465   MODELS 1-20                                                        
REMARK 465     RES C SSSEQI                                                     
REMARK 465     GLY A    76                                                      
REMARK 465     SER A    77                                                      
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: CLOSE CONTACTS                                             
REMARK 500                                                                      
REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT.                            
REMARK 500                                                                      
REMARK 500  ATM1  RES C  SSEQI   ATM2  RES C  SSEQI           DISTANCE          
REMARK 500   O    GLU A   201     H    GLN A   203              1.38            
REMARK 500   O    LEU A   213     H    ASN A   216              1.50            
REMARK 500   O    GLN A   209     H    ASP A   212              1.56            
REMARK 500   O    GLY A    79    HH12  ARG A   196              1.59            
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: TORSION ANGLES                                             
REMARK 500                                                                      
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:            
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500 STANDARD TABLE:                                                      
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)                    
REMARK 500                                                                      
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-           
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400            
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        PSI       PHI                                   
REMARK 500  1 ALA A  84      -84.31    -64.26                                   
REMARK 500  1 GLU A 109      -66.78   -176.26                                   
REMARK 500  1 ASP A 133      105.03    -40.36                                   
REMARK 500  1 THR A 136       55.33   -154.37                                   
REMARK 500  1 ARG A 137      -65.88    -90.82                                   
REMARK 500  1 ALA A 138     -152.59    -69.23                                   
REMARK 500  1 VAL A 141       16.22     85.71                                   
REMARK 500  1 GLN A 164      -85.55     57.36                                   
REMARK 500  1 ALA A 172      120.23     61.14                                   
REMARK 500  1 THR A 174      -52.57   -172.59                                   
REMARK 500  1 LEU A 177      -65.30    -98.38                                   
REMARK 500  1 MET A 189      -92.26    -73.75                                   
REMARK 500  1 ARG A 196      148.03    -38.51                                   
REMARK 500  1 PRO A 197        7.31    -69.57                                   
REMARK 500  1 LEU A 202       41.45    -61.03                                   
REMARK 500  1 GLN A 209      -76.54    -77.96                                   
REMARK 500  1 LEU A 218       68.34   -165.14                                   
REMARK 500  1 ALA A 220      -87.03    -95.80                                   
REMARK 500  1 GLU A 221      -79.68    -77.80                                   
REMARK 500  1 ARG A 222      -30.80    -35.62                                   
REMARK 500  1 ALA A 254      -57.68   -160.70                                   
REMARK 500  1 ALA A 258       33.96   -176.74                                   
REMARK 500  2 ASP A  80       44.66   -162.65                                   
REMARK 500  2 ALA A  81      -29.16    -32.23                                   
REMARK 500  2 ALA A  84      -74.59    -66.31                                   
REMARK 500  2 ILE A  85      -35.33    -39.75                                   
REMARK 500  2 ALA A  92      -72.01    -53.86                                   
REMARK 500  2 THR A 101      -58.25    -29.68                                   
REMARK 500  2 GLU A 109      -54.90   -135.34                                   
REMARK 500  2 ARG A 137       49.55   -100.34                                   
REMARK 500  2 ALA A 138      -95.62   -167.96                                   
REMARK 500  2 SER A 170       78.20     42.33                                   
REMARK 500  2 LEU A 177      -68.85    -97.77                                   
REMARK 500  2 ALA A 191     -148.05    -90.67                                   
REMARK 500  2 ALA A 194      -34.42    -33.82                                   
REMARK 500  2 ARG A 196      140.91    -35.14                                   
REMARK 500  2 LEU A 202       35.66    -59.46                                   
REMARK 500  2 TYR A 205      -18.21    -48.63                                   
REMARK 500  2 ALA A 206      -65.18    -90.05                                   
REMARK 500  2 LEU A 213      -77.62    -58.43                                   
REMARK 500  2 GLU A 221      -83.27    -59.09                                   
REMARK 500  2 GLU A 251      -75.08    -50.91                                   
REMARK 500  2 LYS A 252     -168.61     54.84                                   
REMARK 500  2 ALA A 254       60.51   -156.71                                   
REMARK 500  2 ALA A 257       29.29    -73.40                                   
REMARK 500  2 ALA A 258       79.98    -68.88                                   
REMARK 500  3 ASP A  80       73.59   -155.59                                   
REMARK 500  3 LYS A  94      -70.91    -58.28                                   
REMARK 500  3 ARG A 100       37.93    -94.95                                   
REMARK 500  3 ASP A 107       88.74   -156.79                                   
REMARK 500                                                                      
REMARK 500 THIS ENTRY HAS     492 RAMACHANDRAN OUTLIERS.                        
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 500                                                                      
REMARK 500 GEOMETRY AND STEREOCHEMISTRY                                         
REMARK 500 SUBTOPIC: PLANAR GROUPS                                              
REMARK 500                                                                      
REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL                 
REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE                    
REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN                    
REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS                        
REMARK 500 AN RMSD GREATER THAN THIS VALUE                                      
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;               
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).                             
REMARK 500                                                                      
REMARK 500  M RES CSSEQI        RMS     TYPE                                    
REMARK 500 11 ARG A 112         0.08    SIDE CHAIN                              
REMARK 500                                                                      
REMARK 500 REMARK: NULL                                                         
REMARK 900                                                                      
REMARK 900 RELATED ENTRIES                                                      
REMARK 900 RELATED ID: 5974   RELATED DB: BMRB                                  
REMARK 900 BOPE RESONANCE ASSIGNMENTS                                           
REMARK 900 RELATED ID: 1R6E   RELATED DB: PDB                                   
REMARK 900 NMR SOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF SOPE2              
REMARK 900 RELATED ID: 1R9K   RELATED DB: PDB                                   
REMARK 900 NMR SOLUTION STRUCTURE OF THE CATALYTIC DOMAIN OF SOPE2              
REMARK 900 RELATED ID: 1GZS   RELATED DB: PDB                                   
REMARK 900 CRYSTAL STRUCTURE OF SOPE-CDC42 COMPLEX                              
REMARK 900 RELATED ID: 2JOL   RELATED DB: PDB                                   
REMARK 900 AVERAGE OF SOLUTION STRUCTURE OF BOPE                                
DBREF  2JOK A   78   261  UNP    Q63K41   Q63K41_BURPS    78    261             
SEQADV 2JOK GLY A   76  UNP  Q63K41              EXPRESSION TAG                 
SEQADV 2JOK SER A   77  UNP  Q63K41              EXPRESSION TAG                 
SEQRES   1 A  186  GLY SER THR GLY ASP ALA LYS GLN ALA ILE ARG HIS PHE          
SEQRES   2 A  186  VAL ASP GLU ALA VAL LYS GLN VAL ALA HIS ALA ARG THR          
SEQRES   3 A  186  PRO GLU ILE ARG GLN ASP ALA GLU PHE GLY ARG GLN VAL          
SEQRES   4 A  186  TYR GLU ALA THR LEU CYS ALA ILE PHE SER GLU ALA LYS          
SEQRES   5 A  186  ASP ARG PHE CYS MET ASP PRO ALA THR ARG ALA GLY ASN          
SEQRES   6 A  186  VAL ARG PRO ALA PHE ILE GLU ALA LEU GLY ASP ALA ALA          
SEQRES   7 A  186  ARG ALA THR GLY LEU PRO GLY ALA ASP LYS GLN GLY VAL          
SEQRES   8 A  186  PHE THR PRO SER GLY ALA GLY THR ASN PRO LEU TYR THR          
SEQRES   9 A  186  GLU ILE ARG LEU ARG ALA ASP THR LEU MET GLY ALA GLU          
SEQRES  10 A  186  LEU ALA ALA ARG PRO GLU TYR ARG GLU LEU GLN PRO TYR          
SEQRES  11 A  186  ALA ARG GLN GLN ALA ILE ASP LEU VAL ALA ASN ALA LEU          
SEQRES  12 A  186  PRO ALA GLU ARG SER ASN THR LEU VAL GLU PHE ARG GLN          
SEQRES  13 A  186  THR VAL GLN THR LEU GLU ALA THR TYR ARG ARG ALA ALA          
SEQRES  14 A  186  GLN ASP ALA SER ARG ASP GLU LYS GLY ALA THR ASN ALA          
SEQRES  15 A  186  ALA ASP GLY ALA                                              
HELIX    1   1 GLN A   83  ARG A  100  1                                  18    
HELIX    2   2 ARG A  100  ASP A  107  1                                   8    
HELIX    3   3 GLU A  109  ASP A  133  1                                  25    
HELIX    4   4 PRO A  134  ARG A  137  5                                   4    
HELIX    5   5 VAL A  141  GLY A  157  1                                  17    
HELIX    6   6 LEU A  177  MET A  189  1                                  13    
HELIX    7   7 ALA A  191  ARG A  196  1                                   6    
HELIX    8   8 PRO A  197  ARG A  200  5                                   4    
HELIX    9   9 GLN A  203  ALA A  217  1                                  15    
HELIX   10  10 ALA A  220  LYS A  252  1                                  33    
SHEET    1   A 2 ALA A 161  LYS A 163  0                                        
SHEET    2   A 2 VAL A 166  THR A 168 -1  O  VAL A 166   N  LYS A 163           
CRYST1    1.000    1.000    1.000  90.00  90.00  90.00 P 1           1          
ORIGX1      1.000000  0.000000  0.000000        0.00000                         
ORIGX2      0.000000  1.000000  0.000000        0.00000                         
ORIGX3      0.000000  0.000000  1.000000        0.00000                         
SCALE1      1.000000  0.000000  0.000000        0.00000                         
SCALE2      0.000000  1.000000  0.000000        0.00000                         
SCALE3      0.000000  0.000000  1.000000        0.00000                         
MODEL        1