data_2JOL # _entry.id 2JOL # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.383 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2JOL pdb_00002jol 10.2210/pdb2jol/pdb RCSB RCSB100093 ? ? WWPDB D_1000100093 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2007-03-27 2 'Structure model' 1 1 2008-04-21 3 'Structure model' 1 2 2011-07-13 4 'Structure model' 1 3 2022-03-09 5 'Structure model' 1 4 2023-12-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Version format compliance' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 4 'Structure model' 'Derived calculations' 6 5 'Structure model' 'Data collection' 7 5 'Structure model' Other # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' database_2 2 4 'Structure model' pdbx_nmr_software 3 4 'Structure model' pdbx_struct_assembly 4 4 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif 6 5 'Structure model' chem_comp_atom 7 5 'Structure model' chem_comp_bond 8 5 'Structure model' pdbx_database_status # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_database_2.pdbx_DOI' 2 4 'Structure model' '_database_2.pdbx_database_accession' 3 4 'Structure model' '_pdbx_nmr_software.name' 4 4 'Structure model' '_struct_ref_seq_dif.details' 5 5 'Structure model' '_pdbx_database_status.deposit_site' # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2007-03-27 _pdbx_database_PDB_obs_spr.pdb_id 2JOL _pdbx_database_PDB_obs_spr.replace_pdb_id 2AIC _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.deposit_site RCSB _pdbx_database_status.entry_id 2JOL _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2007-03-14 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.content_type 5974 BMRB 'BopE resonance assignments' unspecified 1R6E PDB 'NMR solution structure of the catalytic domain of SopE2' unspecified 1R9K PDB 'NMR solution structure of the catalytic domain of SopE2' unspecified 1GZS PDB 'Crystal structure of SopE-Cdc42 complex' unspecified 2JOK PDB 'Solution structure of BopE' unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Wu, H.' 1 'Upadhyay, A.' 2 'Williams, C.' 3 'Galyov, E.E.' 4 'van den Elsen, J.M.H.' 5 'Bagby, S.' 6 # _citation.id primary _citation.title ;The guanine-nucleotide-exchange factor BopE from Burkholderia pseudomallei adopts a compact version of the Salmonella SopE/SopE2 fold and undergoes a closed-to-open conformational change upon interaction with Cdc42 ; _citation.journal_abbrev Biochem.J. _citation.journal_volume 411 _citation.page_first 485 _citation.page_last 493 _citation.year 2008 _citation.journal_id_ASTM BIJOAK _citation.country UK _citation.journal_id_ISSN 0264-6021 _citation.journal_id_CSD 0043 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 18052936 _citation.pdbx_database_id_DOI 10.1042/BJ20071546 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Upadhyay, A.' 1 ? primary 'Wu, H.L.' 2 ? primary 'Williams, C.' 3 ? primary 'Field, T.' 4 ? primary 'Galyov, E.E.' 5 ? primary 'van den Elsen, J.M.' 6 ? primary 'Bagby, S.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Putative G-nucleotide exchange factor' _entity.formula_weight 20136.344 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'residues 78-261' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSTGDAKQAIRHFVDEAVKQVAHARTPEIRQDAEFGRQVYEATLCAIFSEAKDRFCMDPATRAGNVRPAFIEALGDAARA TGLPGADKQGVFTPSGAGTNPLYTEIRLRADTLMGAELAARPEYRELQPYARQQAIDLVANALPAERSNTLVEFRQTVQT LEATYRRAAQDASRDEKGATNAADGA ; _entity_poly.pdbx_seq_one_letter_code_can ;GSTGDAKQAIRHFVDEAVKQVAHARTPEIRQDAEFGRQVYEATLCAIFSEAKDRFCMDPATRAGNVRPAFIEALGDAARA TGLPGADKQGVFTPSGAGTNPLYTEIRLRADTLMGAELAARPEYRELQPYARQQAIDLVANALPAERSNTLVEFRQTVQT LEATYRRAAQDASRDEKGATNAADGA ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 THR n 1 4 GLY n 1 5 ASP n 1 6 ALA n 1 7 LYS n 1 8 GLN n 1 9 ALA n 1 10 ILE n 1 11 ARG n 1 12 HIS n 1 13 PHE n 1 14 VAL n 1 15 ASP n 1 16 GLU n 1 17 ALA n 1 18 VAL n 1 19 LYS n 1 20 GLN n 1 21 VAL n 1 22 ALA n 1 23 HIS n 1 24 ALA n 1 25 ARG n 1 26 THR n 1 27 PRO n 1 28 GLU n 1 29 ILE n 1 30 ARG n 1 31 GLN n 1 32 ASP n 1 33 ALA n 1 34 GLU n 1 35 PHE n 1 36 GLY n 1 37 ARG n 1 38 GLN n 1 39 VAL n 1 40 TYR n 1 41 GLU n 1 42 ALA n 1 43 THR n 1 44 LEU n 1 45 CYS n 1 46 ALA n 1 47 ILE n 1 48 PHE n 1 49 SER n 1 50 GLU n 1 51 ALA n 1 52 LYS n 1 53 ASP n 1 54 ARG n 1 55 PHE n 1 56 CYS n 1 57 MET n 1 58 ASP n 1 59 PRO n 1 60 ALA n 1 61 THR n 1 62 ARG n 1 63 ALA n 1 64 GLY n 1 65 ASN n 1 66 VAL n 1 67 ARG n 1 68 PRO n 1 69 ALA n 1 70 PHE n 1 71 ILE n 1 72 GLU n 1 73 ALA n 1 74 LEU n 1 75 GLY n 1 76 ASP n 1 77 ALA n 1 78 ALA n 1 79 ARG n 1 80 ALA n 1 81 THR n 1 82 GLY n 1 83 LEU n 1 84 PRO n 1 85 GLY n 1 86 ALA n 1 87 ASP n 1 88 LYS n 1 89 GLN n 1 90 GLY n 1 91 VAL n 1 92 PHE n 1 93 THR n 1 94 PRO n 1 95 SER n 1 96 GLY n 1 97 ALA n 1 98 GLY n 1 99 THR n 1 100 ASN n 1 101 PRO n 1 102 LEU n 1 103 TYR n 1 104 THR n 1 105 GLU n 1 106 ILE n 1 107 ARG n 1 108 LEU n 1 109 ARG n 1 110 ALA n 1 111 ASP n 1 112 THR n 1 113 LEU n 1 114 MET n 1 115 GLY n 1 116 ALA n 1 117 GLU n 1 118 LEU n 1 119 ALA n 1 120 ALA n 1 121 ARG n 1 122 PRO n 1 123 GLU n 1 124 TYR n 1 125 ARG n 1 126 GLU n 1 127 LEU n 1 128 GLN n 1 129 PRO n 1 130 TYR n 1 131 ALA n 1 132 ARG n 1 133 GLN n 1 134 GLN n 1 135 ALA n 1 136 ILE n 1 137 ASP n 1 138 LEU n 1 139 VAL n 1 140 ALA n 1 141 ASN n 1 142 ALA n 1 143 LEU n 1 144 PRO n 1 145 ALA n 1 146 GLU n 1 147 ARG n 1 148 SER n 1 149 ASN n 1 150 THR n 1 151 LEU n 1 152 VAL n 1 153 GLU n 1 154 PHE n 1 155 ARG n 1 156 GLN n 1 157 THR n 1 158 VAL n 1 159 GLN n 1 160 THR n 1 161 LEU n 1 162 GLU n 1 163 ALA n 1 164 THR n 1 165 TYR n 1 166 ARG n 1 167 ARG n 1 168 ALA n 1 169 ALA n 1 170 GLN n 1 171 ASP n 1 172 ALA n 1 173 SER n 1 174 ARG n 1 175 ASP n 1 176 GLU n 1 177 LYS n 1 178 GLY n 1 179 ALA n 1 180 THR n 1 181 ASN n 1 182 ALA n 1 183 ALA n 1 184 ASP n 1 185 GLY n 1 186 ALA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Burkholderia _entity_src_gen.pdbx_gene_src_gene bopE _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Burkholderia pseudomallei' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 28450 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type vector _entity_src_gen.pdbx_host_org_vector pGEX _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 76 ? ? ? A . n A 1 2 SER 2 77 ? ? ? A . n A 1 3 THR 3 78 78 THR THR A . n A 1 4 GLY 4 79 79 GLY GLY A . n A 1 5 ASP 5 80 80 ASP ASP A . n A 1 6 ALA 6 81 81 ALA ALA A . n A 1 7 LYS 7 82 82 LYS LYS A . n A 1 8 GLN 8 83 83 GLN GLN A . n A 1 9 ALA 9 84 84 ALA ALA A . n A 1 10 ILE 10 85 85 ILE ILE A . n A 1 11 ARG 11 86 86 ARG ARG A . n A 1 12 HIS 12 87 87 HIS HIS A . n A 1 13 PHE 13 88 88 PHE PHE A . n A 1 14 VAL 14 89 89 VAL VAL A . n A 1 15 ASP 15 90 90 ASP ASP A . n A 1 16 GLU 16 91 91 GLU GLU A . n A 1 17 ALA 17 92 92 ALA ALA A . n A 1 18 VAL 18 93 93 VAL VAL A . n A 1 19 LYS 19 94 94 LYS LYS A . n A 1 20 GLN 20 95 95 GLN GLN A . n A 1 21 VAL 21 96 96 VAL VAL A . n A 1 22 ALA 22 97 97 ALA ALA A . n A 1 23 HIS 23 98 98 HIS HIS A . n A 1 24 ALA 24 99 99 ALA ALA A . n A 1 25 ARG 25 100 100 ARG ARG A . n A 1 26 THR 26 101 101 THR THR A . n A 1 27 PRO 27 102 102 PRO PRO A . n A 1 28 GLU 28 103 103 GLU GLU A . n A 1 29 ILE 29 104 104 ILE ILE A . n A 1 30 ARG 30 105 105 ARG ARG A . n A 1 31 GLN 31 106 106 GLN GLN A . n A 1 32 ASP 32 107 107 ASP ASP A . n A 1 33 ALA 33 108 108 ALA ALA A . n A 1 34 GLU 34 109 109 GLU GLU A . n A 1 35 PHE 35 110 110 PHE PHE A . n A 1 36 GLY 36 111 111 GLY GLY A . n A 1 37 ARG 37 112 112 ARG ARG A . n A 1 38 GLN 38 113 113 GLN GLN A . n A 1 39 VAL 39 114 114 VAL VAL A . n A 1 40 TYR 40 115 115 TYR TYR A . n A 1 41 GLU 41 116 116 GLU GLU A . n A 1 42 ALA 42 117 117 ALA ALA A . n A 1 43 THR 43 118 118 THR THR A . n A 1 44 LEU 44 119 119 LEU LEU A . n A 1 45 CYS 45 120 120 CYS CYS A . n A 1 46 ALA 46 121 121 ALA ALA A . n A 1 47 ILE 47 122 122 ILE ILE A . n A 1 48 PHE 48 123 123 PHE PHE A . n A 1 49 SER 49 124 124 SER SER A . n A 1 50 GLU 50 125 125 GLU GLU A . n A 1 51 ALA 51 126 126 ALA ALA A . n A 1 52 LYS 52 127 127 LYS LYS A . n A 1 53 ASP 53 128 128 ASP ASP A . n A 1 54 ARG 54 129 129 ARG ARG A . n A 1 55 PHE 55 130 130 PHE PHE A . n A 1 56 CYS 56 131 131 CYS CYS A . n A 1 57 MET 57 132 132 MET MET A . n A 1 58 ASP 58 133 133 ASP ASP A . n A 1 59 PRO 59 134 134 PRO PRO A . n A 1 60 ALA 60 135 135 ALA ALA A . n A 1 61 THR 61 136 136 THR THR A . n A 1 62 ARG 62 137 137 ARG ARG A . n A 1 63 ALA 63 138 138 ALA ALA A . n A 1 64 GLY 64 139 139 GLY GLY A . n A 1 65 ASN 65 140 140 ASN ASN A . n A 1 66 VAL 66 141 141 VAL VAL A . n A 1 67 ARG 67 142 142 ARG ARG A . n A 1 68 PRO 68 143 143 PRO PRO A . n A 1 69 ALA 69 144 144 ALA ALA A . n A 1 70 PHE 70 145 145 PHE PHE A . n A 1 71 ILE 71 146 146 ILE ILE A . n A 1 72 GLU 72 147 147 GLU GLU A . n A 1 73 ALA 73 148 148 ALA ALA A . n A 1 74 LEU 74 149 149 LEU LEU A . n A 1 75 GLY 75 150 150 GLY GLY A . n A 1 76 ASP 76 151 151 ASP ASP A . n A 1 77 ALA 77 152 152 ALA ALA A . n A 1 78 ALA 78 153 153 ALA ALA A . n A 1 79 ARG 79 154 154 ARG ARG A . n A 1 80 ALA 80 155 155 ALA ALA A . n A 1 81 THR 81 156 156 THR THR A . n A 1 82 GLY 82 157 157 GLY GLY A . n A 1 83 LEU 83 158 158 LEU LEU A . n A 1 84 PRO 84 159 159 PRO PRO A . n A 1 85 GLY 85 160 160 GLY GLY A . n A 1 86 ALA 86 161 161 ALA ALA A . n A 1 87 ASP 87 162 162 ASP ASP A . n A 1 88 LYS 88 163 163 LYS LYS A . n A 1 89 GLN 89 164 164 GLN GLN A . n A 1 90 GLY 90 165 165 GLY GLY A . n A 1 91 VAL 91 166 166 VAL VAL A . n A 1 92 PHE 92 167 167 PHE PHE A . n A 1 93 THR 93 168 168 THR THR A . n A 1 94 PRO 94 169 169 PRO PRO A . n A 1 95 SER 95 170 170 SER SER A . n A 1 96 GLY 96 171 171 GLY GLY A . n A 1 97 ALA 97 172 172 ALA ALA A . n A 1 98 GLY 98 173 173 GLY GLY A . n A 1 99 THR 99 174 174 THR THR A . n A 1 100 ASN 100 175 175 ASN ASN A . n A 1 101 PRO 101 176 176 PRO PRO A . n A 1 102 LEU 102 177 177 LEU LEU A . n A 1 103 TYR 103 178 178 TYR TYR A . n A 1 104 THR 104 179 179 THR THR A . n A 1 105 GLU 105 180 180 GLU GLU A . n A 1 106 ILE 106 181 181 ILE ILE A . n A 1 107 ARG 107 182 182 ARG ARG A . n A 1 108 LEU 108 183 183 LEU LEU A . n A 1 109 ARG 109 184 184 ARG ARG A . n A 1 110 ALA 110 185 185 ALA ALA A . n A 1 111 ASP 111 186 186 ASP ASP A . n A 1 112 THR 112 187 187 THR THR A . n A 1 113 LEU 113 188 188 LEU LEU A . n A 1 114 MET 114 189 189 MET MET A . n A 1 115 GLY 115 190 190 GLY GLY A . n A 1 116 ALA 116 191 191 ALA ALA A . n A 1 117 GLU 117 192 192 GLU GLU A . n A 1 118 LEU 118 193 193 LEU LEU A . n A 1 119 ALA 119 194 194 ALA ALA A . n A 1 120 ALA 120 195 195 ALA ALA A . n A 1 121 ARG 121 196 196 ARG ARG A . n A 1 122 PRO 122 197 197 PRO PRO A . n A 1 123 GLU 123 198 198 GLU GLU A . n A 1 124 TYR 124 199 199 TYR TYR A . n A 1 125 ARG 125 200 200 ARG ARG A . n A 1 126 GLU 126 201 201 GLU GLU A . n A 1 127 LEU 127 202 202 LEU LEU A . n A 1 128 GLN 128 203 203 GLN GLN A . n A 1 129 PRO 129 204 204 PRO PRO A . n A 1 130 TYR 130 205 205 TYR TYR A . n A 1 131 ALA 131 206 206 ALA ALA A . n A 1 132 ARG 132 207 207 ARG ARG A . n A 1 133 GLN 133 208 208 GLN GLN A . n A 1 134 GLN 134 209 209 GLN GLN A . n A 1 135 ALA 135 210 210 ALA ALA A . n A 1 136 ILE 136 211 211 ILE ILE A . n A 1 137 ASP 137 212 212 ASP ASP A . n A 1 138 LEU 138 213 213 LEU LEU A . n A 1 139 VAL 139 214 214 VAL VAL A . n A 1 140 ALA 140 215 215 ALA ALA A . n A 1 141 ASN 141 216 216 ASN ASN A . n A 1 142 ALA 142 217 217 ALA ALA A . n A 1 143 LEU 143 218 218 LEU LEU A . n A 1 144 PRO 144 219 219 PRO PRO A . n A 1 145 ALA 145 220 220 ALA ALA A . n A 1 146 GLU 146 221 221 GLU GLU A . n A 1 147 ARG 147 222 222 ARG ARG A . n A 1 148 SER 148 223 223 SER SER A . n A 1 149 ASN 149 224 224 ASN ASN A . n A 1 150 THR 150 225 225 THR THR A . n A 1 151 LEU 151 226 226 LEU LEU A . n A 1 152 VAL 152 227 227 VAL VAL A . n A 1 153 GLU 153 228 228 GLU GLU A . n A 1 154 PHE 154 229 229 PHE PHE A . n A 1 155 ARG 155 230 230 ARG ARG A . n A 1 156 GLN 156 231 231 GLN GLN A . n A 1 157 THR 157 232 232 THR THR A . n A 1 158 VAL 158 233 233 VAL VAL A . n A 1 159 GLN 159 234 234 GLN GLN A . n A 1 160 THR 160 235 235 THR THR A . n A 1 161 LEU 161 236 236 LEU LEU A . n A 1 162 GLU 162 237 237 GLU GLU A . n A 1 163 ALA 163 238 238 ALA ALA A . n A 1 164 THR 164 239 239 THR THR A . n A 1 165 TYR 165 240 240 TYR TYR A . n A 1 166 ARG 166 241 241 ARG ARG A . n A 1 167 ARG 167 242 242 ARG ARG A . n A 1 168 ALA 168 243 243 ALA ALA A . n A 1 169 ALA 169 244 244 ALA ALA A . n A 1 170 GLN 170 245 245 GLN GLN A . n A 1 171 ASP 171 246 246 ASP ASP A . n A 1 172 ALA 172 247 247 ALA ALA A . n A 1 173 SER 173 248 248 SER SER A . n A 1 174 ARG 174 249 249 ARG ARG A . n A 1 175 ASP 175 250 250 ASP ASP A . n A 1 176 GLU 176 251 251 GLU GLU A . n A 1 177 LYS 177 252 252 LYS LYS A . n A 1 178 GLY 178 253 253 GLY GLY A . n A 1 179 ALA 179 254 254 ALA ALA A . n A 1 180 THR 180 255 255 THR THR A . n A 1 181 ASN 181 256 256 ASN ASN A . n A 1 182 ALA 182 257 257 ALA ALA A . n A 1 183 ALA 183 258 258 ALA ALA A . n A 1 184 ASP 184 259 259 ASP ASP A . n A 1 185 GLY 185 260 260 GLY GLY A . n A 1 186 ALA 186 261 261 ALA ALA A . n # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details 'Average of solution structure of BopE' _exptl.entry_id 2JOL _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews ? _exptl_crystal.density_percent_sol ? _exptl_crystal.description ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type ? # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength . _diffrn_radiation_wavelength.wt 1.0 # _struct.entry_id 2JOL _struct.title 'Average NMR structure of the catalytic domain of guanine nucleotide exchange factor BopE from Burkholderia pseudomallei' _struct.pdbx_model_details 'Average of solution structure of BopE' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details 'minimized average' # _struct_keywords.entry_id 2JOL _struct_keywords.pdbx_keywords 'CELL INVASION, SIGNALING PROTEIN' _struct_keywords.text 'Guanine nucleotide exchange factor, Burkholderia pseudomallei, Type III secretion, SopE, SopE2, CELL INVASION, SIGNALING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q63K41_BURPS _struct_ref.pdbx_db_accession Q63K41 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;TGDAKQAIRHFVDEAVKQVAHARTPEIRQDAEFGRQVYEATLCAIFSEAKDRFCMDPATRAGNVRPAFIEALGDAARATG LPGADKQGVFTPSGAGTNPLYTEIRLRADTLMGAELAARPEYRELQPYARQQAIDLVANALPAERSNTLVEFRQTVQTLE ATYRRAAQDASRDEKGATNAADGA ; _struct_ref.pdbx_align_begin 78 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2JOL _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 186 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q63K41 _struct_ref_seq.db_align_beg 78 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 261 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 78 _struct_ref_seq.pdbx_auth_seq_align_end 261 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2JOL GLY A 1 ? UNP Q63K41 ? ? 'cloning artifact' 76 1 1 2JOL SER A 2 ? UNP Q63K41 ? ? 'cloning artifact' 77 2 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLN A 8 ? ASP A 32 ? GLN A 83 ASP A 107 1 ? 25 HELX_P HELX_P2 2 GLU A 34 ? ASP A 58 ? GLU A 109 ASP A 133 1 ? 25 HELX_P HELX_P3 3 PRO A 59 ? ARG A 62 ? PRO A 134 ARG A 137 5 ? 4 HELX_P HELX_P4 4 VAL A 66 ? THR A 81 ? VAL A 141 THR A 156 1 ? 16 HELX_P HELX_P5 5 PRO A 101 ? GLY A 115 ? PRO A 176 GLY A 190 1 ? 15 HELX_P HELX_P6 6 ALA A 116 ? ARG A 121 ? ALA A 191 ARG A 196 1 ? 6 HELX_P HELX_P7 7 PRO A 122 ? LEU A 127 ? PRO A 197 LEU A 202 1 ? 6 HELX_P HELX_P8 8 GLN A 128 ? ALA A 142 ? GLN A 203 ALA A 217 1 ? 15 HELX_P HELX_P9 9 PRO A 144 ? LYS A 177 ? PRO A 219 LYS A 252 1 ? 34 HELX_P HELX_P10 10 LYS A 177 ? ALA A 183 ? LYS A 252 ALA A 258 1 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 2 _struct_sheet.details ? # _struct_sheet_order.sheet_id A _struct_sheet_order.range_id_1 1 _struct_sheet_order.range_id_2 2 _struct_sheet_order.offset ? _struct_sheet_order.sense anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ALA A 86 ? LYS A 88 ? ALA A 161 LYS A 163 A 2 VAL A 91 ? THR A 93 ? VAL A 166 THR A 168 # _pdbx_struct_sheet_hbond.sheet_id A _pdbx_struct_sheet_hbond.range_id_1 1 _pdbx_struct_sheet_hbond.range_id_2 2 _pdbx_struct_sheet_hbond.range_1_label_atom_id N _pdbx_struct_sheet_hbond.range_1_label_comp_id LYS _pdbx_struct_sheet_hbond.range_1_label_asym_id A _pdbx_struct_sheet_hbond.range_1_label_seq_id 88 _pdbx_struct_sheet_hbond.range_1_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_1_auth_atom_id N _pdbx_struct_sheet_hbond.range_1_auth_comp_id LYS _pdbx_struct_sheet_hbond.range_1_auth_asym_id A _pdbx_struct_sheet_hbond.range_1_auth_seq_id 163 _pdbx_struct_sheet_hbond.range_2_label_atom_id O _pdbx_struct_sheet_hbond.range_2_label_comp_id VAL _pdbx_struct_sheet_hbond.range_2_label_asym_id A _pdbx_struct_sheet_hbond.range_2_label_seq_id 91 _pdbx_struct_sheet_hbond.range_2_PDB_ins_code ? _pdbx_struct_sheet_hbond.range_2_auth_atom_id O _pdbx_struct_sheet_hbond.range_2_auth_comp_id VAL _pdbx_struct_sheet_hbond.range_2_auth_asym_id A _pdbx_struct_sheet_hbond.range_2_auth_seq_id 166 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A THR 235 ? ? HG1 A THR 239 ? ? 1.48 2 1 O A GLU 201 ? ? H A GLN 203 ? ? 1.49 3 1 O A GLU 103 ? ? H A ASP 107 ? ? 1.55 4 1 O A ASP 107 ? ? H A GLU 109 ? ? 1.58 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 80 ? ? -174.29 84.19 2 1 ALA A 81 ? ? -48.46 -16.58 3 1 ALA A 84 ? ? -61.87 -78.46 4 1 ALA A 108 ? ? -64.71 64.26 5 1 GLU A 109 ? ? -145.98 -36.35 6 1 VAL A 141 ? ? -170.21 14.67 7 1 ALA A 172 ? ? 36.26 67.92 8 1 ASN A 175 ? ? 143.41 -41.81 9 1 LEU A 202 ? ? -61.31 37.61 10 1 PRO A 219 ? ? -66.19 -166.62 11 1 GLU A 221 ? ? -64.56 -81.13 12 1 LYS A 252 ? ? -27.55 176.28 13 1 ALA A 254 ? ? -71.77 -85.28 14 1 THR A 255 ? ? -27.30 -61.05 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 40 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2JOL _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2JOL _pdbx_nmr_representative.selection_criteria 'minimized average structure' # _pdbx_nmr_sample_details.contents '0.8 mM protein, 20 mM potassium phosphate, 50 mM sodium chloride, 10 mM DTT, 1 mM benzamidine, 90% H2O/10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'potassium phosphate' 20 mM ? 1 'sodium chloride' 50 mM ? 1 DTT 10 mM ? 1 benzamidine 1 mM ? 1 # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100 _pdbx_nmr_exptl_sample_conditions.pH 5.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-13C HSQC' 1 3 1 '2D 1H-1H TOCSY' 1 4 1 '2D 1H-1H NOESY' 1 5 1 '3D CBCA(CO)NH' 1 6 1 '3D C(CO)NH' 1 7 1 '3D HNCO' 1 8 1 '3D HNCA' 1 9 1 '3D HNCACB' 1 10 1 '3D HBHA(CO)NH' 1 11 1 '3D HN(CO)CA' 1 12 1 '3D H(CCO)NH' 1 13 1 '3D HCCH-TOCSY' 1 14 1 '3D HCCH-TOCSY' 1 15 1 '3D HNHA' 1 16 1 '3D 1H-15N NOESY' 1 17 1 '3D 1H-15N TOCSY' 1 18 1 '3D 1H-13C NOESY' 1 19 1 IPAP-HSQC # _pdbx_nmr_refine.details ? _pdbx_nmr_refine.entry_id 2JOL _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.software_ordinal 1 # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Goddard 'data analysis' Sparky ? 1 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPipe ? 2 'Schwieters, Kuszewski, Tjandra and Clore' 'structure solution' 'X-PLOR NIH' ? 3 'Cornilescu, Delaglio and Bax' 'data analysis' TALOS ? 4 'Schwieters, Kuszewski, Tjandra and Clore' refinement 'X-PLOR NIH' ? 5 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 76 ? A GLY 1 2 1 Y 1 A SER 77 ? A SER 2 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 ILE N N N N 158 ILE CA C N S 159 ILE C C N N 160 ILE O O N N 161 ILE CB C N S 162 ILE CG1 C N N 163 ILE CG2 C N N 164 ILE CD1 C N N 165 ILE OXT O N N 166 ILE H H N N 167 ILE H2 H N N 168 ILE HA H N N 169 ILE HB H N N 170 ILE HG12 H N N 171 ILE HG13 H N N 172 ILE HG21 H N N 173 ILE HG22 H N N 174 ILE HG23 H N N 175 ILE HD11 H N N 176 ILE HD12 H N N 177 ILE HD13 H N N 178 ILE HXT H N N 179 LEU N N N N 180 LEU CA C N S 181 LEU C C N N 182 LEU O O N N 183 LEU CB C N N 184 LEU CG C N N 185 LEU CD1 C N N 186 LEU CD2 C N N 187 LEU OXT O N N 188 LEU H H N N 189 LEU H2 H N N 190 LEU HA H N N 191 LEU HB2 H N N 192 LEU HB3 H N N 193 LEU HG H N N 194 LEU HD11 H N N 195 LEU HD12 H N N 196 LEU HD13 H N N 197 LEU HD21 H N N 198 LEU HD22 H N N 199 LEU HD23 H N N 200 LEU HXT H N N 201 LYS N N N N 202 LYS CA C N S 203 LYS C C N N 204 LYS O O N N 205 LYS CB C N N 206 LYS CG C N N 207 LYS CD C N N 208 LYS CE C N N 209 LYS NZ N N N 210 LYS OXT O N N 211 LYS H H N N 212 LYS H2 H N N 213 LYS HA H N N 214 LYS HB2 H N N 215 LYS HB3 H N N 216 LYS HG2 H N N 217 LYS HG3 H N N 218 LYS HD2 H N N 219 LYS HD3 H N N 220 LYS HE2 H N N 221 LYS HE3 H N N 222 LYS HZ1 H N N 223 LYS HZ2 H N N 224 LYS HZ3 H N N 225 LYS HXT H N N 226 MET N N N N 227 MET CA C N S 228 MET C C N N 229 MET O O N N 230 MET CB C N N 231 MET CG C N N 232 MET SD S N N 233 MET CE C N N 234 MET OXT O N N 235 MET H H N N 236 MET H2 H N N 237 MET HA H N N 238 MET HB2 H N N 239 MET HB3 H N N 240 MET HG2 H N N 241 MET HG3 H N N 242 MET HE1 H N N 243 MET HE2 H N N 244 MET HE3 H N N 245 MET HXT H N N 246 PHE N N N N 247 PHE CA C N S 248 PHE C C N N 249 PHE O O N N 250 PHE CB C N N 251 PHE CG C Y N 252 PHE CD1 C Y N 253 PHE CD2 C Y N 254 PHE CE1 C Y N 255 PHE CE2 C Y N 256 PHE CZ C Y N 257 PHE OXT O N N 258 PHE H H N N 259 PHE H2 H N N 260 PHE HA H N N 261 PHE HB2 H N N 262 PHE HB3 H N N 263 PHE HD1 H N N 264 PHE HD2 H N N 265 PHE HE1 H N N 266 PHE HE2 H N N 267 PHE HZ H N N 268 PHE HXT H N N 269 PRO N N N N 270 PRO CA C N S 271 PRO C C N N 272 PRO O O N N 273 PRO CB C N N 274 PRO CG C N N 275 PRO CD C N N 276 PRO OXT O N N 277 PRO H H N N 278 PRO HA H N N 279 PRO HB2 H N N 280 PRO HB3 H N N 281 PRO HG2 H N N 282 PRO HG3 H N N 283 PRO HD2 H N N 284 PRO HD3 H N N 285 PRO HXT H N N 286 SER N N N N 287 SER CA C N S 288 SER C C N N 289 SER O O N N 290 SER CB C N N 291 SER OG O N N 292 SER OXT O N N 293 SER H H N N 294 SER H2 H N N 295 SER HA H N N 296 SER HB2 H N N 297 SER HB3 H N N 298 SER HG H N N 299 SER HXT H N N 300 THR N N N N 301 THR CA C N S 302 THR C C N N 303 THR O O N N 304 THR CB C N R 305 THR OG1 O N N 306 THR CG2 C N N 307 THR OXT O N N 308 THR H H N N 309 THR H2 H N N 310 THR HA H N N 311 THR HB H N N 312 THR HG1 H N N 313 THR HG21 H N N 314 THR HG22 H N N 315 THR HG23 H N N 316 THR HXT H N N 317 TYR N N N N 318 TYR CA C N S 319 TYR C C N N 320 TYR O O N N 321 TYR CB C N N 322 TYR CG C Y N 323 TYR CD1 C Y N 324 TYR CD2 C Y N 325 TYR CE1 C Y N 326 TYR CE2 C Y N 327 TYR CZ C Y N 328 TYR OH O N N 329 TYR OXT O N N 330 TYR H H N N 331 TYR H2 H N N 332 TYR HA H N N 333 TYR HB2 H N N 334 TYR HB3 H N N 335 TYR HD1 H N N 336 TYR HD2 H N N 337 TYR HE1 H N N 338 TYR HE2 H N N 339 TYR HH H N N 340 TYR HXT H N N 341 VAL N N N N 342 VAL CA C N S 343 VAL C C N N 344 VAL O O N N 345 VAL CB C N N 346 VAL CG1 C N N 347 VAL CG2 C N N 348 VAL OXT O N N 349 VAL H H N N 350 VAL H2 H N N 351 VAL HA H N N 352 VAL HB H N N 353 VAL HG11 H N N 354 VAL HG12 H N N 355 VAL HG13 H N N 356 VAL HG21 H N N 357 VAL HG22 H N N 358 VAL HG23 H N N 359 VAL HXT H N N 360 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TYR N CA sing N N 304 TYR N H sing N N 305 TYR N H2 sing N N 306 TYR CA C sing N N 307 TYR CA CB sing N N 308 TYR CA HA sing N N 309 TYR C O doub N N 310 TYR C OXT sing N N 311 TYR CB CG sing N N 312 TYR CB HB2 sing N N 313 TYR CB HB3 sing N N 314 TYR CG CD1 doub Y N 315 TYR CG CD2 sing Y N 316 TYR CD1 CE1 sing Y N 317 TYR CD1 HD1 sing N N 318 TYR CD2 CE2 doub Y N 319 TYR CD2 HD2 sing N N 320 TYR CE1 CZ doub Y N 321 TYR CE1 HE1 sing N N 322 TYR CE2 CZ sing Y N 323 TYR CE2 HE2 sing N N 324 TYR CZ OH sing N N 325 TYR OH HH sing N N 326 TYR OXT HXT sing N N 327 VAL N CA sing N N 328 VAL N H sing N N 329 VAL N H2 sing N N 330 VAL CA C sing N N 331 VAL CA CB sing N N 332 VAL CA HA sing N N 333 VAL C O doub N N 334 VAL C OXT sing N N 335 VAL CB CG1 sing N N 336 VAL CB CG2 sing N N 337 VAL CB HB sing N N 338 VAL CG1 HG11 sing N N 339 VAL CG1 HG12 sing N N 340 VAL CG1 HG13 sing N N 341 VAL CG2 HG21 sing N N 342 VAL CG2 HG22 sing N N 343 VAL CG2 HG23 sing N N 344 VAL OXT HXT sing N N 345 # _pdbx_nmr_spectrometer.field_strength 600 _pdbx_nmr_spectrometer.manufacturer Varian _pdbx_nmr_spectrometer.model INOVA _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Varian INOVA' # _atom_sites.entry_id 2JOL _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_