HEADER TOXIN 31-MAY-07 2JQB TITLE SOLUTION STRUCTURE OF A NOVEL D-AMINO ACID CONTAINING CONOPEPTIDE, TITLE 2 CONOMARPHIN AT PH 5 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CONOMARPHIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: MARMOPHINE; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 ORGANISM_SCIENTIFIC: CONUS MARMOREUS; SOURCE 4 ORGANISM_COMMON: MARBLE CONE; SOURCE 5 ORGANISM_TAXID: 42752; SOURCE 6 OTHER_DETAILS: THE PEPTIDE IS NATURALLY FOUND IN CONUS MARMOREUS. KEYWDS M CONO-TOXIN, MR12, NMR SOLUTION STRUCTURE, TOXIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR F.HUANG,W.DU,Y.HAN,C.WANG,C.CHI REVDAT 5 20-DEC-23 2JQB 1 REMARK REVDAT 4 14-JUN-23 2JQB 1 REMARK REVDAT 3 19-FEB-20 2JQB 1 COMPND SOURCE REMARK DBREF REVDAT 3 2 1 SEQADV HET HETNAM FORMUL REVDAT 3 3 1 LINK REVDAT 2 24-FEB-09 2JQB 1 VERSN REVDAT 1 03-JUN-08 2JQB 0 JRNL AUTH F.J.HUANG,B.H.WANG,W.H.DU JRNL TITL SOLUTION STRUCTURE OF A NOVEL D-AMINO ACID CONTAINING JRNL TITL 2 CONOPEPTIDE, CONOMARPHIN AT PH 5 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XWINNMR 3.5, AMBER 9.0 REMARK 3 AUTHORS : BRUKER BIOSPIN (XWINNMR), CASE, DARDEN, CHEATHAM, REMARK 3 III, SIMMERLING, WANG, DUKE, LUO, AND KOLL (AMBER) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JQB COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000100155. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 300 REMARK 210 PH : 5 REMARK 210 IONIC STRENGTH : 20 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 2.0 MM MR12 AT PH5, 20 MM REMARK 210 POTASSIUM PHOSPHATE, 90% H2O/10% REMARK 210 D2O; 2.0 MM MR12 AT PH5, 20 MM REMARK 210 POTASSIUM PHOSPHATE, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H NOESY; 2D 1H-1H TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN 1.3, SPARKY 3.113, CYANA REMARK 210 2.1 REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 TRP A 2 29.88 -140.94 REMARK 500 1 HIS A 5 -64.31 -103.84 REMARK 500 1 HYP A 10 -118.35 -80.86 REMARK 500 1 ASN A 11 43.16 -79.35 REMARK 500 2 HIS A 5 -65.80 -103.11 REMARK 500 2 HYP A 10 -96.76 -78.94 REMARK 500 2 ASN A 11 44.20 -79.59 REMARK 500 3 HIS A 5 -66.62 -97.51 REMARK 500 3 ALA A 6 57.62 -95.67 REMARK 500 3 HYP A 10 -98.93 -78.83 REMARK 500 3 ASN A 11 47.85 -80.49 REMARK 500 4 HYP A 10 -99.54 -79.08 REMARK 500 4 ASN A 11 43.62 -79.55 REMARK 500 5 HIS A 5 -65.26 -103.84 REMARK 500 5 HYP A 10 -103.42 -79.69 REMARK 500 5 ASN A 11 41.18 -79.10 REMARK 500 6 HIS A 5 -66.27 -103.89 REMARK 500 6 ALA A 6 56.21 -90.64 REMARK 500 6 HYP A 10 -95.94 -78.29 REMARK 500 6 ASN A 11 43.58 -79.78 REMARK 500 7 HIS A 5 -66.21 -98.75 REMARK 500 7 HYP A 10 -107.49 -80.28 REMARK 500 7 ASN A 11 47.73 -79.84 REMARK 500 8 HYP A 10 -99.13 -79.15 REMARK 500 8 ASN A 11 39.38 -78.81 REMARK 500 9 HIS A 5 -68.03 -105.81 REMARK 500 9 HYP A 10 -95.32 -79.12 REMARK 500 9 ASN A 11 41.43 -79.21 REMARK 500 10 HIS A 5 -67.66 -103.66 REMARK 500 10 HYP A 10 -99.21 -79.57 REMARK 500 10 ASN A 11 36.87 -78.61 REMARK 500 11 HIS A 5 -64.14 -101.83 REMARK 500 11 HYP A 10 -95.20 -77.90 REMARK 500 11 ASN A 11 44.77 -79.82 REMARK 500 12 HIS A 5 -67.86 -104.85 REMARK 500 12 HYP A 10 -107.28 -79.51 REMARK 500 12 ASN A 11 40.82 -80.65 REMARK 500 12 DPN A 13 -15.42 -59.29 REMARK 500 13 HYP A 10 -94.76 -78.87 REMARK 500 13 ASN A 11 41.14 -79.37 REMARK 500 14 HIS A 5 -64.71 -107.17 REMARK 500 14 HYP A 10 -108.65 -80.37 REMARK 500 14 ASN A 11 47.87 -79.70 REMARK 500 15 HIS A 5 -65.29 -106.36 REMARK 500 15 HYP A 10 -99.01 -79.98 REMARK 500 15 ASN A 11 39.10 -78.67 REMARK 500 16 HIS A 5 -65.09 -105.92 REMARK 500 16 ALA A 6 55.81 -90.23 REMARK 500 16 HYP A 10 -91.07 -77.63 REMARK 500 16 ASN A 11 41.12 -79.18 REMARK 500 REMARK 500 THIS ENTRY HAS 65 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2YYF RELATED DB: PDB REMARK 900 PURIFICATION AND STRUCTURAL CHARACTERIZATION OF A D-AMINO ACID REMARK 900 CONTAINING CONOPEPTIDE, MARMOPHINE, FROM CONUS MARMOREUS REMARK 900 RELATED ID: 2JQC RELATED DB: PDB REMARK 900 PURIFICATION AND STRUCTURAL CHARACTERIZATION OF A D-AMINO ACID REMARK 900 CONTAINING CONOPEPTIDE, MARMOPHINE, FROM CONUS MARMOREUS REMARK 900 RELATED ID: 15272 RELATED DB: BMRB DBREF 2JQB A 1 15 UNP B2KPN7 COMA_CONMR 55 69 SEQADV 2JQB DPN A 13 UNP B2KPN7 PHE 67 CONFLICT SEQRES 1 A 15 ASP TRP GLU TYR HIS ALA HIS PRO LYS HYP ASN SER DPN SEQRES 2 A 15 TRP THR MODRES 2JQB HYP A 10 PRO MODIFIED RESIDUE HET HYP A 10 15 HET DPN A 13 20 HETNAM HYP 4-HYDROXYPROLINE HETNAM DPN D-PHENYLALANINE HETSYN HYP HYDROXYPROLINE FORMUL 1 HYP C5 H9 N O3 FORMUL 1 DPN C9 H11 N O2 HELIX 1 1 ASN A 11 THR A 15 5 5 LINK C LYS A 9 N HYP A 10 1555 1555 1.35 LINK C HYP A 10 N ASN A 11 1555 1555 1.34 LINK C SER A 12 N DPN A 13 1555 1555 1.34 LINK C DPN A 13 N TRP A 14 1555 1555 1.33 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1