HEADER NEUROPEPTIDE 07-JUN-07 2JQS TITLE CONFORMATION OF DIP-AST5 FROM 2D NMR DATA COMPND MOL_ID: 1; COMPND 2 MOLECULE: ALLATOSTATINS; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: ALLATOSTATIN-5, SEQUENCE DATABASE RESIDUES 154-161; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 SYNTHETIC: YES; SOURCE 3 OTHER_DETAILS: THE PEPTIDE IS NATURALLY FOUND IN DIPLOPTERA PUNCTATA SOURCE 4 (PACIFIC BEETLE COCKROACH). KEYWDS TYPE II BETA TURN ON C-TERMINUS, 3.10 HELIX AMONG RESIDUES LEU3-TYR4- KEYWDS 2 SER5, NEUROPEPTIDE EXPDTA SOLUTION NMR NUMMDL 30 AUTHOR E.MEYEROWITZ,C.HUANG,S.MOHANTY REVDAT 6 20-DEC-23 2JQS 1 REMARK REVDAT 5 09-MAR-22 2JQS 1 REMARK LINK REVDAT 4 23-SEP-08 2JQS 1 JRNL REVDAT 3 17-JUN-08 2JQS 1 SEQRES VERSN REVDAT 2 24-JUL-07 2JQS 1 AUTHOR REVDAT 1 26-JUN-07 2JQS 0 JRNL AUTH M.BANERJEE,E.MEYEROWITZ,C.HUANG,S.MOHANTY JRNL TITL PROBING THE CONFORMATION AND DYNAMICS OF ALLATOSTATIN JRNL TITL 2 NEUROPEPTIDES: A STRUCTURAL MODEL FOR FUNCTIONAL JRNL TITL 3 DIFFERENCES. JRNL REF PEPTIDES V. 29 375 2008 JRNL REFN ISSN 0196-9781 JRNL PMID 18191874 JRNL DOI 10.1016/J.PEPTIDES.2007.11.016 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : DYANA 1.0.6, CYANA 1.0.6 REMARK 3 AUTHORS : GUNTERT ET AL. (DYANA), GUNTERT ET AL. (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: THE FINAL STRUCTURES WERE RUN THROUGH REMARK 3 MOLECULAR DYNAMICS SIMULATIONS BUT NOT FOR THE PURPOSE OF REMARK 3 STRUCTURE REFINEMENT REMARK 4 REMARK 4 2JQS COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000100172. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : 1 ATM REMARK 210 SAMPLE CONTENTS : 1 MM DIP-AST5: 8 RESIDUE PEPTIDE REMARK 210 (DRLYSFGL-NH2), 1MM REMARK 210 CONCENTRATION, PURE D2O OR 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D NOESY; 2D TOCSY; DQF-COSY; 2D REMARK 210 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ; 700 MHZ; 800 REMARK 210 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE 97.027.12.56 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS AS REMARK 210 IMPLEMENTED BY THE PROGRAM CYANA REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 30 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: SEVEN DIHEDRAL ANGLE RESTRAINTS WERE OBTAINED FROM THE REMARK 210 PROGRAM CYANA. IN ADDITION, SIX COUPLING CONSTANTS WERE OBTAINED REMARK 210 BY THE METHOD OUTLINED BY KIM AND PRESTEGARD (1989). REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O PHE A 6 H LEU A 8 1.58 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 2 -66.53 -109.85 REMARK 500 2 ARG A 2 -69.15 -109.33 REMARK 500 6 ARG A 2 -66.39 -109.87 REMARK 500 7 ARG A 2 -66.47 -109.83 REMARK 500 8 ARG A 2 -66.28 -109.85 REMARK 500 9 ARG A 2 -66.40 -109.83 REMARK 500 10 ARG A 2 -66.49 -109.78 REMARK 500 11 ARG A 2 -77.07 -109.38 REMARK 500 12 ARG A 2 -75.50 -109.83 REMARK 500 15 ARG A 2 -65.28 -109.93 REMARK 500 21 ARG A 2 -78.05 -110.30 REMARK 500 23 ARG A 2 -77.29 -110.10 REMARK 500 24 ARG A 2 -67.44 -109.58 REMARK 500 25 ARG A 2 -71.09 -109.50 REMARK 500 26 ARG A 2 -77.11 -109.70 REMARK 500 27 ARG A 2 -77.11 -109.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NH2 A 9 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JQU RELATED DB: PDB DBREF 2JQS A 1 8 UNP P12764 ALLS_DIPPU 154 161 SEQRES 1 A 9 ASP ARG LEU TYR SER PHE GLY LEU NH2 HET NH2 A 9 3 HETNAM NH2 AMINO GROUP FORMUL 1 NH2 H2 N HELIX 1 1 LEU A 3 GLY A 7 5 5 LINK C LEU A 8 N NH2 A 9 1555 1555 1.32 SITE 1 AC1 3 PHE A 6 GLY A 7 LEU A 8 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1