HEADER TRANSCRIPTION 18-JUN-07 2JR0 TITLE SOLUTION STRUCTURE OF NUSB FROM AQUIFEX AEOLICUS COMPND MOL_ID: 1; COMPND 2 MOLECULE: N UTILIZATION SUBSTANCE PROTEIN B HOMOLOG; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: PROTEIN NUSB; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AQUIFEX AEOLICUS; SOURCE 3 ORGANISM_TAXID: 63363; SOURCE 4 GENE: NUSB; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET3A KEYWDS NUSB, AQUIFEX AEOLICUS, ANTITERMINATOR, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR R.DAS,S.LOSS,J.LI,S.TARASOV,P.WINGFIELD,D.S.WAUGH,R.A.BYRD, AUTHOR 2 A.S.ALTIERI REVDAT 5 20-DEC-23 2JR0 1 REMARK REVDAT 4 14-JUN-23 2JR0 1 REMARK REVDAT 3 19-FEB-20 2JR0 1 REMARK REVDAT 2 24-FEB-09 2JR0 1 VERSN REVDAT 1 19-FEB-08 2JR0 0 JRNL AUTH R.DAS,S.LOSS,J.LI,D.S.WAUGH,S.TARASOV,P.T.WINGFIELD, JRNL AUTH 2 R.A.BYRD,A.S.ALTIERI JRNL TITL STRUCTURAL BIOPHYSICS OF THE NUSB:NUSE ANTITERMINATION JRNL TITL 2 COMPLEX. JRNL REF J.MOL.BIOL. V. 376 705 2008 JRNL REFN ISSN 0022-2836 JRNL PMID 18177898 JRNL DOI 10.1016/J.JMB.2007.11.022 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ANSIG REMARK 3 AUTHORS : KRAULIS, P.J. ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JR0 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 20-JUN-07. REMARK 100 THE DEPOSITION ID IS D_1000100180. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 50 MM POTASSIUM PHOSPHATE, 200 REMARK 210 MM POTASSIUM CHLORIDE, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D HNCO; 3D CBCA(CO)NH; 2D 1H REMARK 210 -15N HSQC; 3D HNCACB; 3D H(CCO) REMARK 210 NH; 2D 1H-13C HSQC; 3D HCCH- REMARK 210 TOCSY; 3D C(CO)NH; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY; 4D 15N/ REMARK 210 13C NOESY; 4D 13C/13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, NMRPIPE REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ILE A 105 H ASP A 109 1.46 REMARK 500 O PHE A 104 H VAL A 108 1.47 REMARK 500 O LYS A 36 H ILE A 38 1.48 REMARK 500 O VAL A 80 H ALA A 84 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 24 97.48 -32.70 REMARK 500 1 ASN A 37 48.45 -64.92 REMARK 500 1 LYS A 39 -84.56 58.18 REMARK 500 1 ASN A 40 89.26 -43.54 REMARK 500 1 ARG A 56 -14.53 -49.77 REMARK 500 1 HIS A 57 32.84 -178.43 REMARK 500 1 ILE A 58 -56.62 -27.90 REMARK 500 1 LEU A 69 0.41 -56.02 REMARK 500 1 LYS A 70 17.81 54.70 REMARK 500 1 TRP A 72 178.72 -52.56 REMARK 500 1 ARG A 76 -98.70 30.00 REMARK 500 1 LEU A 77 -66.42 -140.48 REMARK 500 1 LEU A 92 -84.89 -3.36 REMARK 500 1 LYS A 96 -57.27 99.47 REMARK 500 1 SER A 97 -114.50 143.65 REMARK 500 1 LYS A 98 98.16 81.23 REMARK 500 1 GLU A 99 71.06 43.72 REMARK 500 1 SER A 138 -97.40 -33.52 REMARK 500 1 LYS A 139 149.11 -174.59 REMARK 500 1 GLU A 141 87.78 51.02 REMARK 500 1 LEU A 145 -19.59 -173.86 REMARK 500 1 LYS A 146 -94.61 47.93 REMARK 500 1 SER A 147 9.18 54.76 REMARK 500 2 ARG A 2 -73.03 -146.54 REMARK 500 2 ASN A 24 83.61 38.88 REMARK 500 2 ILE A 38 102.92 -47.46 REMARK 500 2 ASN A 40 104.18 57.78 REMARK 500 2 HIS A 57 35.30 -176.80 REMARK 500 2 LEU A 69 -24.84 -37.82 REMARK 500 2 LYS A 70 -26.06 79.65 REMARK 500 2 ARG A 76 -100.62 16.15 REMARK 500 2 LEU A 92 -84.10 -5.91 REMARK 500 2 LYS A 96 81.64 59.83 REMARK 500 2 SER A 138 -157.95 83.37 REMARK 500 2 GLU A 140 -147.38 -140.70 REMARK 500 2 GLU A 141 -42.96 -133.69 REMARK 500 2 LEU A 145 86.65 -156.73 REMARK 500 2 SER A 147 165.71 60.63 REMARK 500 3 ARG A 2 9.49 52.42 REMARK 500 3 ASN A 24 98.40 39.52 REMARK 500 3 LYS A 36 -157.33 -67.77 REMARK 500 3 LYS A 39 -75.96 -60.92 REMARK 500 3 ASN A 40 93.40 -46.14 REMARK 500 3 HIS A 57 -55.90 -139.53 REMARK 500 3 ILE A 58 -94.91 80.10 REMARK 500 3 LEU A 69 -24.41 -39.65 REMARK 500 3 LYS A 70 -38.42 80.49 REMARK 500 3 ARG A 76 43.64 27.83 REMARK 500 3 LEU A 77 101.16 70.59 REMARK 500 3 LEU A 92 -78.07 -7.71 REMARK 500 REMARK 500 THIS ENTRY HAS 336 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15312 RELATED DB: BMRB DBREF 2JR0 A 1 148 UNP O66530 NUSB_AQUAE 1 148 SEQRES 1 A 148 MET ARG TYR ARG LYS GLY ALA ARG ASP THR ALA PHE LEU SEQRES 2 A 148 VAL LEU TYR ARG TRP ASP LEU ARG GLY GLU ASN PRO GLY SEQRES 3 A 148 GLU LEU PHE LYS GLU VAL VAL GLU GLU LYS ASN ILE LYS SEQRES 4 A 148 ASN LYS ASP ALA TYR GLU TYR ALA LYS LYS LEU VAL ASP SEQRES 5 A 148 THR ALA VAL ARG HIS ILE GLU GLU ILE ASP SER ILE ILE SEQRES 6 A 148 GLU LYS HIS LEU LYS GLY TRP SER ILE ASP ARG LEU GLY SEQRES 7 A 148 TYR VAL GLU ARG ASN ALA LEU ARG LEU GLY VAL ALA GLU SEQRES 8 A 148 LEU ILE PHE LEU LYS SER LYS GLU PRO GLY ARG VAL PHE SEQRES 9 A 148 ILE ASP ILE VAL ASP LEU VAL LYS LYS TYR ALA ASP GLU SEQRES 10 A 148 LYS ALA GLY LYS PHE VAL ASN GLY VAL LEU SER ALA ILE SEQRES 11 A 148 TYR LYS ALA TYR ILE THR SER SER LYS GLU GLU LYS PRO SEQRES 12 A 148 SER LEU LYS SER GLU HELIX 1 1 ARG A 2 ARG A 21 1 20 HELIX 2 2 ASN A 24 LYS A 36 1 13 HELIX 3 3 ASN A 40 ARG A 56 1 17 HELIX 4 4 HIS A 57 LYS A 67 1 11 HELIX 5 5 GLY A 78 ILE A 93 1 16 HELIX 6 6 GLU A 99 ALA A 115 1 17 HELIX 7 7 ASP A 116 SER A 138 1 23 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1