HEADER CHAPERONE/NUCLEAR PROTEIN 11-JUL-07 2JSS TITLE NMR STRUCTURE OF CHAPERONE CHZ1 COMPLEXED WITH HISTONE H2A.Z-H2B COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHIMERA OF HISTONE H2B.1 AND HISTONE H2A.Z; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: CHIMERA OF SUPPRESSOR OF TY PROTEIN 12 AND H2AZ, HTA3; COMPND 5 ENGINEERED: YES; COMPND 6 MOL_ID: 2; COMPND 7 MOLECULE: UNCHARACTERIZED PROTEIN YER030W; COMPND 8 CHAIN: B; COMPND 9 FRAGMENT: SEQUENCE DATABASE RESIDUES 71-132; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: HTB1, H2B1, SPT12; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-CODONPLUS(DE3)-RIL; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 10 EXPRESSION_SYSTEM_VECTOR: PET-17B; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 14 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 15 ORGANISM_TAXID: 4932 KEYWDS HISTONE-CHAPERONE COMPLEX, INTRINSICALLY UNFOLDED PROTEIN, CHAPERONE- KEYWDS 2 STRUCTURAL PROTEIN COMPLEX, CHAPERONE-NUCLEAR PROTEIN COMPLEX EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR Z.ZHOU,H.FENG,D.F.HANSEN,H.KATO,E.LUK,D.I.FREEDBERG,L.E.KAY,C.WU, AUTHOR 2 Y.BAI REVDAT 6 29-MAY-24 2JSS 1 REMARK REVDAT 5 18-AUG-21 2JSS 1 SOURCE REMARK REVDAT 4 24-FEB-09 2JSS 1 VERSN REVDAT 3 19-AUG-08 2JSS 1 JRNL REVDAT 2 22-JUL-08 2JSS 1 JRNL REVDAT 1 20-MAY-08 2JSS 0 JRNL AUTH Z.ZHOU,H.FENG,D.F.HANSEN,H.KATO,E.LUK,D.I.FREEDBERG,L.E.KAY, JRNL AUTH 2 C.WU,Y.BAI JRNL TITL NMR STRUCTURE OF CHAPERONE CHZ1 COMPLEXED WITH HISTONES JRNL TITL 2 H2A.Z-H2B. JRNL REF NAT.STRUCT.MOL.BIOL. V. 15 868 2008 JRNL REFN ISSN 1545-9993 JRNL PMID 18641662 JRNL DOI 10.1038/NSMB.1465 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : X-PLOR NIH 2.16 REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JSS COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-JUL-07. REMARK 100 THE DEPOSITION ID IS D_1000100244. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 308 REMARK 210 PH : 6.0 REMARK 210 IONIC STRENGTH : 200 MM KCL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.0~1.2 MM [U-35%2H]/[U-100% 2H] REMARK 210 H2A.Z-H2B/CHZ1; 1.0~1.2 MM [U- REMARK 210 100% 15N;U-100%2H]/[U-30%2H] REMARK 210 H2A.Z-H2B/CHZ1, 25 MM MES, 200 REMARK 210 MM KCL, 1MM EDTA; 1.0~1.2 MM [U- REMARK 210 100% 13C;U-30%2H]/[U-100% 2H] REMARK 210 H2A.Z-H2B/CHZ1, 25 MM MES, 200 REMARK 210 MM KCL, 1MM EDTA; 1.0~1.2 MM [U- REMARK 210 13C; U-15N; U-2H]/[U-100% 2H] REMARK 210 H2A.Z-H2B/CHZ1, 25 MM MES, 200 REMARK 210 MM KCL, 1MM EDTA; 1.0~1.2 MM [U- REMARK 210 100% 15N;U-30%2H]/[U-100% 2H] REMARK 210 H2A.Z-H2B/CHZ1, 25 MM MES, 200 REMARK 210 MM KCL, 1MM EDTA; 1.0~1.2 MM [U- REMARK 210 100% 13C;U-35%2H]/[U-100% 2H] REMARK 210 H2A.Z-H2B/CHZ1, 25 MM MES, 200 REMARK 210 MM KCL, 1MM EDTA; 1.0~1.2 MM [U- REMARK 210 100% 15N;U-100%2H]/[U-30%2H] REMARK 210 H2A.Z-H2B/CHZ1, 25 MM MES, 200 REMARK 210 MM KCL, 1MM EDTA; 1.0~1.2 MM [U- REMARK 210 100% 13C;U-35%2H]/[U-100% 2H] REMARK 210 CHZ1/H2A.Z-H2B, 25 MM MES, 200 REMARK 210 MM KCL, 1MM EDTA; 1.0~1.2 MM [U- REMARK 210 100% 15N;U-30%2H]/[U-100% 2H] REMARK 210 CHZ1/H2A.Z-H2B, 25 MM MES, 200 REMARK 210 MM KCL, 1MM EDTA; 1.0~1.2 MM [U- REMARK 210 100% 13C;U-35%2H]/[U-100% 2H] REMARK 210 CHZ1/H2A.Z-H2B, 25 MM MES, 200 REMARK 210 MM KCL, 1MM EDTA; 1.0~1.2 MM [U- REMARK 210 100%15N;U-100% 2H] CHZ1/H2A.Z- REMARK 210 H2B, 25 MM MES, 200 MM KCL, 1MM REMARK 210 EDTA; 1.0~1.2 MM [U-100% 13C; U- REMARK 210 100% 15N;U-100%2H] H2A.Z-H2B/ REMARK 210 CHZ1, 25 MM MES, 200 MM KCL, 1MM REMARK 210 EDTA; 1.0~1.2 MM [U-10% 13C; U- REMARK 210 100% 15N]/[U-100% 2H] CHZ1/H2A.Z- REMARK 210 H2B, 25 MM MES, 200 MM KCL, 1MM REMARK 210 EDTA REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-1H NOESY; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HNCO; 3D HN(CO)CA; 3D H(CCO)NH; REMARK 210 3D HCCH-TOCSY; 3D HBHA(CO)NH; 3D REMARK 210 HNHA; 3D HNCANNH; 3D TOCSY-HSQC; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW 5.0.4, X-PLOR NIH 2.16, REMARK 210 NMRPIPE 2004, PIPP 4.3.3, TALOS REMARK 210 2004, PROCHECKNMR 3.5.4 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS, REMARK 210 SIMULATED ANNEALING, MOLECULAR REMARK 210 DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY AND NO VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HE22 GLN A 94 HG SER A 98 1.32 REMARK 500 O LYS A 54 H THR A 56 1.39 REMARK 500 O LEU A 175 H ILE A 179 1.40 REMARK 500 O PHE A 33 H ILE A 37 1.45 REMARK 500 O THR A 87 H SER A 91 1.46 REMARK 500 H SER A 58 OE2 GLU A 61 1.48 REMARK 500 O ALA A 65 H ILE A 69 1.48 REMARK 500 O GLY B 46 H VAL B 48 1.50 REMARK 500 O GLU B 6 HG SER B 7 1.51 REMARK 500 O ASP B 8 H ASP B 10 1.51 REMARK 500 O SER B 7 H MET B 9 1.51 REMARK 500 O ALA A 148 H ALA A 152 1.52 REMARK 500 O GLY A 72 H LYS A 76 1.52 REMARK 500 O GLY A 186 H VAL A 188 1.53 REMARK 500 O LEU A 137 H THR A 141 1.53 REMARK 500 O THR A 93 H ALA A 95 1.56 REMARK 500 O LEU A 175 H LEU A 178 1.58 REMARK 500 O LEU A 167 H GLY A 171 1.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 2 -102.53 25.57 REMARK 500 1 THR A 4 176.61 50.72 REMARK 500 1 TYR A 5 30.53 -78.60 REMARK 500 1 SER A 7 -75.95 -50.46 REMARK 500 1 ASP A 19 75.66 -112.16 REMARK 500 1 THR A 20 80.76 -155.18 REMARK 500 1 ILE A 22 135.19 39.98 REMARK 500 1 ILE A 41 -73.13 -72.64 REMARK 500 1 ALA A 42 -14.96 -48.56 REMARK 500 1 LYS A 53 -0.21 63.51 REMARK 500 1 SER A 55 -47.74 63.83 REMARK 500 1 THR A 56 90.40 -68.82 REMARK 500 1 ILE A 57 96.17 -66.66 REMARK 500 1 PRO A 71 -29.63 -36.40 REMARK 500 1 THR A 87 -71.51 -64.12 REMARK 500 1 SER A 92 -76.13 -78.55 REMARK 500 1 THR A 93 152.81 151.86 REMARK 500 1 GLN A 94 35.61 -67.20 REMARK 500 1 GLN A 96 -56.55 -159.11 REMARK 500 1 SER A 97 112.03 168.30 REMARK 500 1 SER A 99 24.49 -76.39 REMARK 500 1 ALA A 100 -28.54 -155.98 REMARK 500 1 GLN A 105 27.09 -74.79 REMARK 500 1 PRO A 107 88.89 -34.42 REMARK 500 1 THR A 120 27.10 37.14 REMARK 500 1 SER A 127 -8.01 -50.76 REMARK 500 1 ALA A 129 -72.50 -145.13 REMARK 500 1 LYS A 156 -36.92 -175.57 REMARK 500 1 ILE A 160 155.17 -39.96 REMARK 500 1 PRO A 162 -12.62 -40.86 REMARK 500 1 ILE A 169 -64.84 -105.69 REMARK 500 1 ASP A 172 93.40 -64.87 REMARK 500 1 ARG A 180 35.93 28.01 REMARK 500 1 THR A 182 -68.45 -145.41 REMARK 500 1 SER A 185 -33.18 -170.83 REMARK 500 1 PRO A 190 -99.88 -81.61 REMARK 500 1 GLU B 3 -9.23 -162.22 REMARK 500 1 ASP B 4 19.61 -174.75 REMARK 500 1 SER B 5 -100.53 -45.05 REMARK 500 1 GLU B 6 87.46 44.99 REMARK 500 1 SER B 7 -12.97 66.99 REMARK 500 1 ASP B 8 -55.73 66.09 REMARK 500 1 MET B 9 -54.10 65.67 REMARK 500 1 ASP B 11 -56.97 -139.61 REMARK 500 1 LYS B 13 -60.08 -90.79 REMARK 500 1 MET B 18 -19.29 -46.83 REMARK 500 1 ASN B 20 125.52 69.77 REMARK 500 1 GLU B 21 -29.74 -32.30 REMARK 500 1 GLU B 23 5.77 -66.37 REMARK 500 1 ASP B 28 -71.13 -172.46 REMARK 500 REMARK 500 THIS ENTRY HAS 635 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1YFQ RELATED DB: PDB DBREF 2JSS A 1 95 UNP P02293 H2B1_YEAST 37 131 DBREF 2JSS A 96 192 UNP Q12692 H2AZ_YEAST 23 119 DBREF 2JSS B 1 62 UNP P40019 YEM0_YEAST 71 132 SEQRES 1 A 192 ARG LYS GLU THR TYR SER SER TYR ILE TYR LYS VAL LEU SEQRES 2 A 192 LYS GLN THR HIS PRO ASP THR GLY ILE SER GLN LYS SER SEQRES 3 A 192 MET SER ILE LEU ASN SER PHE VAL ASN ASP ILE PHE GLU SEQRES 4 A 192 ARG ILE ALA THR GLU ALA SER LYS LEU ALA ALA TYR ASN SEQRES 5 A 192 LYS LYS SER THR ILE SER ALA ARG GLU ILE GLN THR ALA SEQRES 6 A 192 VAL ARG LEU ILE LEU PRO GLY GLU LEU ALA LYS HIS ALA SEQRES 7 A 192 VAL SER GLU GLY THR ARG ALA VAL THR LYS TYR SER SER SEQRES 8 A 192 SER THR GLN ALA GLN SER SER SER ALA ARG ALA GLY LEU SEQRES 9 A 192 GLN PHE PRO VAL GLY ARG ILE LYS ARG TYR LEU LYS ARG SEQRES 10 A 192 HIS ALA THR GLY ARG THR ARG VAL GLY SER LYS ALA ALA SEQRES 11 A 192 ILE TYR LEU THR ALA VAL LEU GLU TYR LEU THR ALA GLU SEQRES 12 A 192 VAL LEU GLU LEU ALA GLY ASN ALA ALA LYS ASP LEU LYS SEQRES 13 A 192 VAL LYS ARG ILE THR PRO ARG HIS LEU GLN LEU ALA ILE SEQRES 14 A 192 ARG GLY ASP ASP GLU LEU ASP SER LEU ILE ARG ALA THR SEQRES 15 A 192 ILE ALA SER GLY GLY VAL LEU PRO HIS ILE SEQRES 1 B 62 THR VAL GLU ASP SER GLU SER ASP MET ASP ASP ALA LYS SEQRES 2 B 62 LEU ASP ALA LEU MET GLY ASN GLU GLY GLU GLU GLU GLU SEQRES 3 B 62 ASP ASP LEU ALA GLU ILE ASP THR SER ASN ILE ILE THR SEQRES 4 B 62 SER GLY ARG ARG THR ARG GLY LYS VAL ILE ASP TYR LYS SEQRES 5 B 62 LYS THR ALA GLU GLU LEU ASP LYS LYS GLU HELIX 1 1 TYR A 5 HIS A 17 1 13 HELIX 2 2 SER A 23 TYR A 51 1 29 HELIX 3 3 SER A 58 LEU A 70 1 13 HELIX 4 4 GLY A 72 THR A 93 1 22 HELIX 5 5 SER A 97 ALA A 102 1 6 HELIX 6 6 PRO A 107 HIS A 118 1 12 HELIX 7 7 ALA A 129 LYS A 156 1 28 HELIX 8 8 THR A 161 GLY A 171 1 11 HELIX 9 9 ASP A 172 ARG A 180 1 9 HELIX 10 10 ASP B 11 LEU B 17 1 7 HELIX 11 11 GLY B 22 ASP B 27 5 6 HELIX 12 12 ASP B 33 ILE B 37 5 5 HELIX 13 13 LYS B 52 LYS B 61 1 10 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1