HEADER STRUCTURAL GENOMICS 07-AUG-07 2JTV TITLE SOLUTION STRUCTURE OF PROTEIN RPA3401, NORTHEAST STRUCTURAL GENOMICS TITLE 2 CONSORTIUM TARGET RPT7, ONTARIO CENTER FOR STRUCTURAL PROTEOMICS TITLE 3 TARGET RP3384 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN OF UNKNOWN FUNCTION; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHODOPSEUDOMONAS PALUSTRIS; SOURCE 3 ORGANISM_TAXID: 258594; SOURCE 4 STRAIN: CGA009; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: P15TV LIC KEYWDS PROTEIN WITH UNKNOWN FUNCTION RPA3401, NORTHEAST STRUCTURAL GENOMICS KEYWDS 2 CONSORTIUM, NESG, PSI-2, STRUCTURAL GENOMICS, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.IGNATCHENKO,A.GUTMANAS,A.LEMAK,A.YEE,M.KARRA,S.SRISAILAM, AUTHOR 2 C.ARROWSMITH,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 6 01-MAY-24 2JTV 1 REMARK REVDAT 5 18-JAN-12 2JTV 1 REMARK REVDAT 4 13-JUL-11 2JTV 1 VERSN REVDAT 3 24-FEB-09 2JTV 1 VERSN REVDAT 2 25-NOV-08 2JTV 1 COMPND REVDAT 1 09-OCT-07 2JTV 0 JRNL AUTH A.IGNATCHENKO,A.GUTMANAS,A.LEMAK,A.YEE,M.KARRA,S.SRISAILAM, JRNL AUTH 2 C.ARROWSMITH JRNL TITL SOLUTION STRUCTURE OF PROTEIN RPA3401, NORTHEAST STRUCTURAL JRNL TITL 2 GENOMICS CONSORTIUM TARGET RPT7, ONTARIO CENTER FOR JRNL TITL 3 STRUCTURAL PROTEOMICS TARGET RP3384 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 1 REMARK 1 REFERENCE 1 REMARK 1 AUTH A.LEMAK,A.GUTMANAS,S.CHITAYAT,M.KARRA,C.FARES,M.SUNNERHAGEN, REMARK 1 AUTH 2 C.H.ARROWSMITH REMARK 1 TITL A NOVEL STRATEGY FOR NMR RESONANCE ASSIGNMENT AND PROTEIN REMARK 1 TITL 2 STRUCTURE DETERMINATION. REMARK 1 REF J.BIOMOL.NMR V. 49 27 2011 REMARK 1 REFN ISSN 0925-2738 REMARK 1 PMID 21161328 REMARK 1 DOI 10.1007/S10858-010-9458-0 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS, CNS REMARK 3 AUTHORS : BRUNGER, A.T. ET AL. (CNS), BRUNGER, A.T. ET AL. REMARK 3 (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JTV COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 08-AUG-07. REMARK 100 THE DEPOSITION ID IS D_1000100283. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 300 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.6 MM [U-13C; U-15N] RHA3401, REMARK 210 300 MM NACL, 10 MM [U-99% 2H] REMARK 210 TRIS, 1 MM BENZAMIDINE, 0.01 % REMARK 210 NAN3, 95% H2O/5% D2O; 0.6 MM [U- REMARK 210 13C; U-15N] RHA3401, 300 MM NACL, REMARK 210 10 MM [U-99% 2H] TRIS, 1 MM REMARK 210 BENZAMIDINE, 0.01 % NAN3, 100% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D HNCA; 3D CBCA(CO)NH; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C NOESY; REMARK 210 3D HCCH-TOCSY; 4D(PR) REMARK 210 HBHACBCA(CO)NH; 4D(PR) HCC(CO)NH REMARK 210 TOCSY; 3D 1H-13C AROMATIC NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, TALOS, SPARKY REMARK 210 METHOD USED : MOLECULAR DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 SER A 25 -163.81 61.64 REMARK 500 1 SER A 43 -71.80 -90.68 REMARK 500 1 ARG A 48 -73.56 -84.06 REMARK 500 1 THR A 55 -169.58 -101.78 REMARK 500 2 SER A 44 -76.81 66.58 REMARK 500 2 VAL A 45 104.66 62.47 REMARK 500 2 SER A 47 -93.44 61.28 REMARK 500 3 SER A 47 103.32 -52.15 REMARK 500 4 SER A 25 -162.18 50.26 REMARK 500 4 SER A 47 76.15 39.01 REMARK 500 4 ARG A 48 -23.80 62.29 REMARK 500 5 SER A 25 -172.06 70.92 REMARK 500 5 SER A 47 -76.09 58.38 REMARK 500 6 SER A 25 -159.23 59.20 REMARK 500 6 SER A 47 106.39 -49.47 REMARK 500 6 ARG A 48 -65.72 67.57 REMARK 500 7 SER A 25 177.93 173.17 REMARK 500 7 SER A 44 117.43 -161.03 REMARK 500 7 ARG A 48 -52.20 -121.79 REMARK 500 8 SER A 47 -142.45 62.02 REMARK 500 9 ARG A 48 -12.84 64.60 REMARK 500 10 SER A 43 -61.38 -144.73 REMARK 500 10 SER A 47 -80.04 65.24 REMARK 500 10 ARG A 48 10.06 -151.75 REMARK 500 11 SER A 25 -177.76 61.92 REMARK 500 11 SER A 47 -56.03 71.63 REMARK 500 11 ARG A 48 -16.81 -176.12 REMARK 500 12 SER A 47 -75.20 67.00 REMARK 500 12 ARG A 64 103.15 60.70 REMARK 500 13 SER A 25 -37.91 -156.89 REMARK 500 13 SER A 44 72.03 52.74 REMARK 500 13 SER A 47 -92.41 48.79 REMARK 500 14 SER A 47 71.40 54.73 REMARK 500 14 ARG A 48 -31.31 64.33 REMARK 500 15 SER A 25 -171.81 58.99 REMARK 500 15 SER A 47 -81.96 64.65 REMARK 500 16 SER A 25 -157.35 65.35 REMARK 500 16 SER A 43 -58.19 -157.56 REMARK 500 16 ARG A 48 -37.76 75.78 REMARK 500 18 PHE A 23 -72.82 -64.77 REMARK 500 18 SER A 43 -73.77 -103.68 REMARK 500 19 SER A 25 -157.41 67.99 REMARK 500 19 SER A 43 -70.51 -87.56 REMARK 500 19 VAL A 45 83.54 53.00 REMARK 500 20 SER A 25 -163.38 62.85 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: RPT7 RELATED DB: TARGETDB DBREF 2JTV A 1 65 UNP Q6N4D8 Q6N4D8_RHOPA 1 65 SEQRES 1 A 65 MET ALA THR ALA ASP ASP PHE LYS LEU ILE ARG ASP ILE SEQRES 2 A 65 HIS SER THR GLY GLY ARG ARG GLN VAL PHE GLY SER ARG SEQRES 3 A 65 GLU GLN LYS PRO PHE GLU ASP LEU VAL ASP LEU GLY TRP SEQRES 4 A 65 LEU LYS ARG SER SER VAL ASP SER ARG ALA THR HIS TYR SEQRES 5 A 65 GLN ILE THR GLU ARG GLY THR SER ALA ALA LEU ARG SER HELIX 1 1 THR A 3 THR A 16 1 14 HELIX 2 2 GLY A 24 LEU A 37 1 14 HELIX 3 3 THR A 55 ARG A 64 1 10 SHEET 1 A 3 ARG A 19 VAL A 22 0 SHEET 2 A 3 THR A 50 ILE A 54 -1 O TYR A 52 N ARG A 20 SHEET 3 A 3 LEU A 40 VAL A 45 -1 N SER A 44 O HIS A 51 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1