HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 12-DEC-07 2JYC OBSLTE 17-AUG-11 2JYC 2LGR TITLE NMR SOLUTION STRUCTURE OF HUMAN PROTEIN C6ORF130, A PUTATIVE MACRO TITLE 2 DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN C6ORF130; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: C6ORF130; SOURCE 6 EXPRESSION_SYSTEM: CELL-FREE SYNTHESIS; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PEU-HIS; SOURCE 8 OTHER_DETAILS: WHEAT GERM CELL-FREE, IN VITRO EXPRESSION KEYWDS MACRO DOMAIN, A1PP DOMAIN, BC011709, C6ORF130, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, PSI-2, CENTER FOR EUKARYOTIC STRUCTURAL GENOMICS, CESG, KEYWDS 3 STRUCTURAL GENOMICS, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR B.F.VOLKMAN,B.L.LYTLE,F.C.PETERSON,CENTER FOR EUKARYOTIC STRUCTURAL AUTHOR 2 GENOMICS (CESG) REVDAT 4 17-AUG-11 2JYC 1 OBSLTE VERSN REVDAT 3 24-FEB-09 2JYC 1 VERSN REVDAT 2 29-APR-08 2JYC 1 SOURCE REVDAT 1 08-JAN-08 2JYC 0 JRNL AUTH B.L.LYTLE,F.C.PETERSON,B.F.VOLKMAN JRNL TITL SOLUTION STRUCTURE OF HUMAN C6ORF130, A PUTATIVE MACRO JRNL TITL 2 DOMAIN. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : XPLOR-NIH 2.9.3 REMARK 3 AUTHORS : SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: STRUCTURES ARE BASED ON A TOTAL OF 1976 REMARK 3 NOE CONSTRAINTS (758 INTRA, 418 SEQUENTIAL, 217 MEDIUM AND 583 REMARK 3 LONG RANGE CONSTRAINTS) AND 186 PHI AND PSI DIHEDRAL ANGLE REMARK 3 CONSTRAINTS. REMARK 4 REMARK 4 2JYC COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-DEC-07. REMARK 100 THE RCSB ID CODE IS RCSB100443. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 200 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.55 MM [U-100% 13C; U-100% 15N] REMARK 210 C6ORF130, 20 MM BIS-TRIS, 200 MM REMARK 210 SODIUM CHLORIDE, 2 MM DTT, 93% REMARK 210 H2O, 7% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D_15N-SEPARATED_NOESY; 3D_13C- REMARK 210 SEPARATED_NOESY; 3D_13C- REMARK 210 SEPARATED_NOESY (AROMATIC) REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : DRX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XWINNMR 3.5, NMRPIPE 2004, XEASY REMARK 210 1.3, SPSCAN 1.1.0, GARANT 2.1, REMARK 210 XPLOR-NIH 2.9.3, CYANA 2.1 REMARK 210 METHOD USED : AUTOMATED METHODS WERE USED FOR REMARK 210 BACKBONE CHEMICAL SHIFT REMARK 210 ASSIGNMENT AND ITERATIVE NOE REMARK 210 REFINEMENT. FINAL STRUCTURES WERE REMARK 210 OBTAINED BY MOLECULAR DYNAMICS IN REMARK 210 EXPLICIT SOLVENT. REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 GLY A -7 REMARK 465 HIS A -6 REMARK 465 HIS A -5 REMARK 465 HIS A -4 REMARK 465 HIS A -3 REMARK 465 HIS A -2 REMARK 465 HIS A -1 REMARK 465 LEU A 0 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 GLU A 10 105.11 -179.57 REMARK 500 1 MET A 40 -96.48 47.58 REMARK 500 1 GLN A 62 106.52 59.82 REMARK 500 1 ASP A 74 -72.47 66.74 REMARK 500 1 LYS A 84 105.30 176.72 REMARK 500 1 LYS A 85 -74.88 42.13 REMARK 500 1 ARG A 119 85.75 -54.82 REMARK 500 1 CYS A 122 -58.82 69.25 REMARK 500 1 ASP A 125 -56.33 -122.54 REMARK 500 1 GLU A 141 -80.95 32.78 REMARK 500 2 SER A 4 107.31 -169.90 REMARK 500 2 PRO A 9 -162.23 -113.11 REMARK 500 2 GLU A 10 -59.41 70.89 REMARK 500 2 ARG A 13 -59.88 -125.85 REMARK 500 2 CYS A 38 18.69 55.08 REMARK 500 2 MET A 40 -73.38 72.20 REMARK 500 2 GLN A 62 75.62 66.71 REMARK 500 2 ASP A 74 -75.11 63.86 REMARK 500 2 LYS A 85 -73.73 -72.36 REMARK 500 2 ARG A 119 94.34 -59.14 REMARK 500 2 CYS A 122 160.68 75.70 REMARK 500 2 LEU A 124 -49.75 -150.41 REMARK 500 2 ASP A 125 -75.45 -150.76 REMARK 500 3 ALA A 2 -71.19 -111.48 REMARK 500 3 GLU A 10 100.71 -163.05 REMARK 500 3 ARG A 13 -74.96 -127.75 REMARK 500 3 MET A 40 -90.02 60.03 REMARK 500 3 GLN A 62 95.95 51.45 REMARK 500 3 SER A 65 109.50 -58.32 REMARK 500 3 ASP A 74 -84.99 60.44 REMARK 500 3 ARG A 119 98.01 -31.11 REMARK 500 3 CYS A 122 -69.28 64.37 REMARK 500 4 GLU A 10 117.01 -170.24 REMARK 500 4 SER A 12 -71.14 -63.83 REMARK 500 4 ARG A 13 -56.85 -120.43 REMARK 500 4 MET A 40 -159.01 61.99 REMARK 500 4 ASP A 74 -88.07 61.10 REMARK 500 4 ARG A 119 93.99 -55.69 REMARK 500 4 ASP A 125 -92.61 56.13 REMARK 500 5 ASN A 6 93.35 -160.06 REMARK 500 5 GLU A 10 78.90 65.00 REMARK 500 5 CYS A 38 -9.56 64.36 REMARK 500 5 MET A 40 -75.11 70.59 REMARK 500 5 GLN A 62 81.63 49.98 REMARK 500 5 ASP A 74 -71.81 67.88 REMARK 500 5 ARG A 119 99.14 -49.86 REMARK 500 5 CYS A 122 -40.97 72.81 REMARK 500 5 ALA A 142 3.54 80.58 REMARK 500 5 ASP A 144 82.88 68.92 REMARK 500 6 GLU A 7 -79.86 -62.99 REMARK 500 REMARK 500 THIS ENTRY HAS 185 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 2 ARG A 76 0.08 SIDE CHAIN REMARK 500 7 ARG A 76 0.08 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 1 GLU A 141 20.8 L L OUTSIDE RANGE REMARK 500 3 GLU A 36 24.6 L L OUTSIDE RANGE REMARK 500 4 LEU A 127 22.6 L L OUTSIDE RANGE REMARK 500 4 PHE A 140 24.5 L L OUTSIDE RANGE REMARK 500 5 ARG A 39 23.8 L L OUTSIDE RANGE REMARK 500 5 PHE A 140 24.9 L L OUTSIDE RANGE REMARK 500 11 PHE A 140 24.3 L L OUTSIDE RANGE REMARK 500 15 MET A 40 24.5 L L OUTSIDE RANGE REMARK 500 19 GLN A 62 24.4 L L OUTSIDE RANGE REMARK 500 19 GLU A 141 23.8 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: GO.36728 RELATED DB: TARGETDB DBREF 2JYC A 2 152 UNP Q9Y530 CF130_HUMAN 2 152 SEQADV 2JYC GLY A -7 UNP Q9Y530 EXPRESSION TAG SEQADV 2JYC HIS A -6 UNP Q9Y530 EXPRESSION TAG SEQADV 2JYC HIS A -5 UNP Q9Y530 EXPRESSION TAG SEQADV 2JYC HIS A -4 UNP Q9Y530 EXPRESSION TAG SEQADV 2JYC HIS A -3 UNP Q9Y530 EXPRESSION TAG SEQADV 2JYC HIS A -2 UNP Q9Y530 EXPRESSION TAG SEQADV 2JYC HIS A -1 UNP Q9Y530 EXPRESSION TAG SEQADV 2JYC LEU A 0 UNP Q9Y530 EXPRESSION TAG SEQADV 2JYC GLU A 1 UNP Q9Y530 EXPRESSION TAG SEQRES 1 A 160 GLY HIS HIS HIS HIS HIS HIS LEU GLU ALA SER SER LEU SEQRES 2 A 160 ASN GLU ASP PRO GLU GLY SER ARG ILE THR TYR VAL LYS SEQRES 3 A 160 GLY ASP LEU PHE ALA CYS PRO LYS THR ASP SER LEU ALA SEQRES 4 A 160 HIS CYS ILE SER GLU ASP CYS ARG MET GLY ALA GLY ILE SEQRES 5 A 160 ALA VAL LEU PHE LYS LYS LYS PHE GLY GLY VAL GLN GLU SEQRES 6 A 160 LEU LEU ASN GLN GLN LYS LYS SER GLY GLU VAL ALA VAL SEQRES 7 A 160 LEU LYS ARG ASP GLY ARG TYR ILE TYR TYR LEU ILE THR SEQRES 8 A 160 LYS LYS ARG ALA SER HIS LYS PRO THR TYR GLU ASN LEU SEQRES 9 A 160 GLN LYS SER LEU GLU ALA MET LYS SER HIS CYS LEU LYS SEQRES 10 A 160 ASN GLY VAL THR ASP LEU SER MET PRO ARG ILE GLY CYS SEQRES 11 A 160 GLY LEU ASP ARG LEU GLN TRP GLU ASN VAL SER ALA MET SEQRES 12 A 160 ILE GLU GLU VAL PHE GLU ALA THR ASP ILE LYS ILE THR SEQRES 13 A 160 VAL TYR THR LEU HELIX 1 1 ILE A 44 GLY A 53 1 10 HELIX 2 2 GLY A 54 GLN A 62 1 9 HELIX 3 3 THR A 92 GLY A 111 1 20 HELIX 4 4 GLN A 128 GLU A 141 1 14 SHEET 1 A 6 ILE A 14 LYS A 18 0 SHEET 2 A 6 LYS A 146 THR A 151 1 O VAL A 149 N THR A 15 SHEET 3 A 6 ASP A 114 PRO A 118 1 N LEU A 115 O LYS A 146 SHEET 4 A 6 SER A 29 ILE A 34 1 N SER A 29 O SER A 116 SHEET 5 A 6 ARG A 76 ILE A 82 1 O LEU A 81 N HIS A 32 SHEET 6 A 6 VAL A 68 ARG A 73 -1 N LEU A 71 O ILE A 78 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1