HEADER TRANSCRIPTION 21-DEC-07 2JZ1 TITLE DSX_LONG COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN DOUBLESEX; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: DROSOPHILA MELANOGASTER; SOURCE 3 ORGANISM_COMMON: FRUIT FLY; SOURCE 4 ORGANISM_TAXID: 7227; SOURCE 5 GENE: DSX; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR: PMW127 KEYWDS DOUBLE SEX, SEX DETERMINATION, DEVELOPMENT, GENE REGULATION, KEYWDS 2 UBIQUITIN, TRANSCRIPTION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Y.YANG,W.ZHANG,J.R.BAYRER,M.A.WEISS REVDAT 4 16-MAR-22 2JZ1 1 REMARK SEQADV REVDAT 3 24-FEB-09 2JZ1 1 VERSN REVDAT 2 08-APR-08 2JZ1 1 JRNL REVDAT 1 08-JAN-08 2JZ1 0 JRNL AUTH Y.YANG,W.ZHANG,J.R.BAYRER,M.A.WEISS JRNL TITL DOUBLESEX AND THE REGULATION OF SEXUAL DIMORPHISM IN JRNL TITL 2 DROSOPHILA MELANOGASTER: STRUCTURE, FUNCTION, AND JRNL TITL 3 MUTAGENESIS OF A FEMALE-SPECIFIC DOMAIN. JRNL REF J.BIOL.CHEM. V. 283 7280 2008 JRNL REFN ISSN 0021-9258 JRNL PMID 18184648 JRNL DOI 10.1074/JBC.M708742200 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PIPP, X-PLOR NIH REMARK 3 AUTHORS : GARRETT (PIPP), SCHWIETERS, KUSZEWSKI, TJANDRA AND REMARK 3 CLORE (X-PLOR NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JZ1 COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 03-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000100468. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 303 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 250 (NACL) REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 90 % H2O, 10 % D2O, 1 MM [U-100% REMARK 210 13C; U-100% 15N] PROTEIN, 90% REMARK 210 H2O/10% D2O; 90 % H2O, 10 % D2O, REMARK 210 1.2 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D C(CO)NH; 3D H(CCO) REMARK 210 NH; 3D HNCO; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY; 4D 13C/13C EDITED REMARK 210 NOESY; FILTERED NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 700 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE; INOVA REMARK 210 SPECTROMETER MANUFACTURER : BRUKER; VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, X-PLOR NIH, TALOS, REMARK 210 INSIGHT II REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O VAL A 54 H TYR A 58 1.47 REMARK 500 O TYR A 53 H GLU A 57 1.52 REMARK 500 O VAL B 54 H TYR B 58 1.57 REMARK 500 OD1 ASN A 65 H ILE A 66 1.59 REMARK 500 O ILE B 48 H GLN B 52 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 3 -161.49 -63.44 REMARK 500 1 LEU A 4 -83.73 53.75 REMARK 500 1 ALA A 37 35.60 -76.87 REMARK 500 1 ASP A 38 17.50 53.13 REMARK 500 1 LEU A 64 -77.49 -76.30 REMARK 500 1 ASN A 65 -78.89 -111.32 REMARK 500 1 ILE A 66 34.04 31.53 REMARK 500 1 TYR A 67 127.23 63.19 REMARK 500 1 GLU A 71 6.07 -69.80 REMARK 500 1 ASN A 74 -41.49 -165.23 REMARK 500 1 THR A 75 -74.36 61.66 REMARK 500 1 ARG A 77 39.35 -166.63 REMARK 500 1 CYS A 79 -74.49 -60.82 REMARK 500 1 ALA B 37 35.40 -84.97 REMARK 500 1 ASP B 38 13.73 53.48 REMARK 500 1 ARG B 60 -13.65 -47.43 REMARK 500 1 ASP B 68 48.93 -79.22 REMARK 500 1 THR B 75 -117.73 46.96 REMARK 500 1 THR B 76 -99.07 -86.32 REMARK 500 1 GLN B 78 -76.49 -46.04 REMARK 500 1 CYS B 79 -28.76 -168.88 REMARK 500 2 PRO A 23 176.60 -58.44 REMARK 500 2 ALA A 37 36.40 -76.94 REMARK 500 2 ASP A 38 17.28 52.81 REMARK 500 2 ASN A 63 129.99 -32.84 REMARK 500 2 ILE A 66 -31.47 -135.98 REMARK 500 2 ASP A 68 28.22 -75.48 REMARK 500 2 ARG A 73 -166.13 -55.87 REMARK 500 2 THR A 75 -52.55 -150.06 REMARK 500 2 THR A 76 -10.83 -49.94 REMARK 500 2 CYS A 79 -154.57 43.47 REMARK 500 2 LEU B 4 92.89 49.11 REMARK 500 2 GLN B 6 -19.93 -48.06 REMARK 500 2 ALA B 37 36.26 -77.32 REMARK 500 2 ASP B 38 15.20 52.86 REMARK 500 2 GLN B 61 -8.57 -54.13 REMARK 500 2 ASN B 63 -52.15 -156.78 REMARK 500 2 LEU B 72 -87.96 -80.00 REMARK 500 2 THR B 75 -100.00 -91.26 REMARK 500 2 THR B 76 -134.81 -94.88 REMARK 500 3 ALA A 37 35.08 -77.13 REMARK 500 3 ASP A 38 15.51 52.97 REMARK 500 3 LEU A 64 -164.80 46.10 REMARK 500 3 ASN A 65 -27.88 -172.23 REMARK 500 3 ILE A 66 17.36 -66.09 REMARK 500 3 TYR A 67 159.57 -49.46 REMARK 500 3 LEU A 72 -102.80 -76.73 REMARK 500 3 ARG A 73 -108.40 -137.32 REMARK 500 3 THR A 75 -82.95 -49.47 REMARK 500 3 ARG A 77 -140.39 -87.49 REMARK 500 REMARK 500 THIS ENTRY HAS 515 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JZ0 RELATED DB: PDB DBREF 2JZ1 A 3 80 UNP P23023 DSX_DROME 350 429 DBREF 2JZ1 B 3 80 UNP P23023 DSX_DROME 350 429 SEQADV 2JZ1 GLY A 1 UNP P23023 EXPRESSION TAG SEQADV 2JZ1 SER A 2 UNP P23023 EXPRESSION TAG SEQADV 2JZ1 GLY B 1 UNP P23023 EXPRESSION TAG SEQADV 2JZ1 SER B 2 UNP P23023 EXPRESSION TAG SEQRES 1 A 80 GLY SER PRO LEU GLY GLN ASP VAL PHE LEU ASP TYR CYS SEQRES 2 A 80 GLN LYS LEU LEU GLU LYS PHE ARG TYR PRO TRP GLU LEU SEQRES 3 A 80 MET PRO LEU MET TYR VAL ILE LEU LYS ASP ALA ASP ALA SEQRES 4 A 80 ASN ILE GLU GLU ALA SER ARG ARG ILE GLU GLU GLY GLN SEQRES 5 A 80 TYR VAL VAL ASN GLU TYR SER ARG GLN HIS ASN LEU ASN SEQRES 6 A 80 ILE TYR ASP GLY GLY GLU LEU ARG ASN THR THR ARG GLN SEQRES 7 A 80 CYS GLY SEQRES 1 B 80 GLY SER PRO LEU GLY GLN ASP VAL PHE LEU ASP TYR CYS SEQRES 2 B 80 GLN LYS LEU LEU GLU LYS PHE ARG TYR PRO TRP GLU LEU SEQRES 3 B 80 MET PRO LEU MET TYR VAL ILE LEU LYS ASP ALA ASP ALA SEQRES 4 B 80 ASN ILE GLU GLU ALA SER ARG ARG ILE GLU GLU GLY GLN SEQRES 5 B 80 TYR VAL VAL ASN GLU TYR SER ARG GLN HIS ASN LEU ASN SEQRES 6 B 80 ILE TYR ASP GLY GLY GLU LEU ARG ASN THR THR ARG GLN SEQRES 7 B 80 CYS GLY HELIX 1 1 LEU A 4 PHE A 20 1 17 HELIX 2 2 PRO A 23 GLU A 25 5 3 HELIX 3 3 LEU A 26 ALA A 37 1 12 HELIX 4 4 ASN A 40 GLN A 61 1 22 HELIX 5 5 GLY B 5 PHE B 20 1 16 HELIX 6 6 PRO B 23 GLU B 25 5 3 HELIX 7 7 LEU B 26 ALA B 37 1 12 HELIX 8 8 ASN B 40 HIS B 62 1 23 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1