data_2JZE # _entry.id 2JZE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2JZE pdb_00002jze 10.2210/pdb2jze/pdb RCSB RCSB100481 ? ? WWPDB D_1000100481 ? ? # loop_ _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details _pdbx_database_related.content_type 388820 TargetDB . unspecified 15618 BMRB 'NMR assignment of the domain 527-651 from the SARS-CoV nonstructural protein nsp3' unspecified 15469 BMRB 'NMR assignment of the domain 513-651 from the SARS-CoV nonstructural protein nsp3' unspecified 2JZD PDB 'NMR structure of the domain 527-651 of the SARS-CoV nonstructural protein nsp3, ensemble of twenty energy minimized structures' unspecified 2JZF PDB 'NMR structure of the domain 513-651 of the SARS-CoV nonstructural protein nsp3, single conformer' unspecified 2RNK PDB 'NMR structure of the domain 513-651 of the SARS-CoV nonstructural protein nsp3, ensemble of twenty energy minimized structures' unspecified # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2JZE _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-01-04 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Chatterjee, A.' 1 'Johnson, M.A.' 2 'Serrano, P.' 3 'Pedrini, B.' 4 'Joseph, J.' 5 'Saikatendu, K.' 6 'Neuman, B.' 7 'Stevens, R.C.' 8 'Wilson, I.A.' 9 'Buchmeier, M.J.' 10 'Kuhn, P.' 11 'Wuthrich, K.' 12 'Joint Center for Structural Genomics (JCSG)' 13 # _citation.id primary _citation.title ;Nuclear magnetic resonance structure shows that the severe acute respiratory syndrome coronavirus-unique domain contains a macrodomain fold. ; _citation.journal_abbrev J.Virol. _citation.journal_volume 83 _citation.page_first 1823 _citation.page_last 1836 _citation.year 2009 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19052085 _citation.pdbx_database_id_DOI 10.1128/JVI.01781-08 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Chatterjee, A.' 1 ? primary 'Johnson, M.A.' 2 ? primary 'Serrano, P.' 3 ? primary 'Pedrini, B.' 4 ? primary 'Joseph, J.S.' 5 ? primary 'Neuman, B.W.' 6 ? primary 'Saikatendu, K.' 7 ? primary 'Buchmeier, M.J.' 8 ? primary 'Kuhn, P.' 9 ? primary 'Wuthrich, K.' 10 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Replicase polyprotein 1ab' _entity.formula_weight 14366.678 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment 'Non-structural protein 3 (Domain 527-651): Residues 1345-1469' _entity.details ? # _entity_name_com.entity_id 1 _entity_name_com.name ;pp1ab, ORF1ab polyprotein [includes: Replicase polyprotein 1a, Non-structural proteins 1,2,3,4, 3C-like proteinase, Non-structural proteins 6,7,8,9,10, RNA-directed RNA polymerase, Helicase, Exoribonuclease, Uridylate-specific endoribonuclease, Putative 2'-O-methyl transferase] ; # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSHMGTVSWNLREMLAHAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP LVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSS ; _entity_poly.pdbx_seq_one_letter_code_can ;GSHMGTVSWNLREMLAHAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEP LVTMPIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier 388820 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLY n 1 6 THR n 1 7 VAL n 1 8 SER n 1 9 TRP n 1 10 ASN n 1 11 LEU n 1 12 ARG n 1 13 GLU n 1 14 MET n 1 15 LEU n 1 16 ALA n 1 17 HIS n 1 18 ALA n 1 19 GLU n 1 20 GLU n 1 21 THR n 1 22 ARG n 1 23 LYS n 1 24 LEU n 1 25 MET n 1 26 PRO n 1 27 ILE n 1 28 CYS n 1 29 MET n 1 30 ASP n 1 31 VAL n 1 32 ARG n 1 33 ALA n 1 34 ILE n 1 35 MET n 1 36 ALA n 1 37 THR n 1 38 ILE n 1 39 GLN n 1 40 ARG n 1 41 LYS n 1 42 TYR n 1 43 LYS n 1 44 GLY n 1 45 ILE n 1 46 LYS n 1 47 ILE n 1 48 GLN n 1 49 GLU n 1 50 GLY n 1 51 ILE n 1 52 VAL n 1 53 ASP n 1 54 TYR n 1 55 GLY n 1 56 VAL n 1 57 ARG n 1 58 PHE n 1 59 PHE n 1 60 PHE n 1 61 TYR n 1 62 THR n 1 63 SER n 1 64 LYS n 1 65 GLU n 1 66 PRO n 1 67 VAL n 1 68 ALA n 1 69 SER n 1 70 ILE n 1 71 ILE n 1 72 THR n 1 73 LYS n 1 74 LEU n 1 75 ASN n 1 76 SER n 1 77 LEU n 1 78 ASN n 1 79 GLU n 1 80 PRO n 1 81 LEU n 1 82 VAL n 1 83 THR n 1 84 MET n 1 85 PRO n 1 86 ILE n 1 87 GLY n 1 88 TYR n 1 89 VAL n 1 90 THR n 1 91 HIS n 1 92 GLY n 1 93 PHE n 1 94 ASN n 1 95 LEU n 1 96 GLU n 1 97 GLU n 1 98 ALA n 1 99 ALA n 1 100 ARG n 1 101 CYS n 1 102 MET n 1 103 ARG n 1 104 SER n 1 105 LEU n 1 106 LYS n 1 107 ALA n 1 108 PRO n 1 109 ALA n 1 110 VAL n 1 111 VAL n 1 112 SER n 1 113 VAL n 1 114 SER n 1 115 SER n 1 116 PRO n 1 117 ASP n 1 118 ALA n 1 119 VAL n 1 120 THR n 1 121 THR n 1 122 TYR n 1 123 ASN n 1 124 GLY n 1 125 TYR n 1 126 LEU n 1 127 THR n 1 128 SER n 1 129 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Coronavirus _entity_src_gen.pdbx_gene_src_gene 'rep, 1a-1b' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'SARS coronavirus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 227859 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli BL21(DE3)' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species 'Escherichia coli' _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28b _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code R1AB_CVHSA _struct_ref.pdbx_db_accession P59641 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;GTVSWNLREMLAHAEETRKLMPICMDVRAIMATIQRKYKGIKIQEGIVDYGVRFFFYTSKEPVASIITKLNSLNEPLVTM PIGYVTHGFNLEEAARCMRSLKAPAVVSVSSPDAVTTYNGYLTSS ; _struct_ref.pdbx_align_begin 1345 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2JZE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 5 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 129 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P59641 _struct_ref_seq.db_align_beg 1345 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 1469 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 527 _struct_ref_seq.pdbx_auth_seq_align_end 651 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2JZE GLY A 1 ? UNP P59641 ? ? 'expression tag' -4 1 1 2JZE SER A 2 ? UNP P59641 ? ? 'expression tag' -3 2 1 2JZE HIS A 3 ? UNP P59641 ? ? 'expression tag' -2 3 1 2JZE MET A 4 ? UNP P59641 ? ? 'expression tag' -1 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '3D 1H-15N NOESY' 1 2 1 '3D 1H-13C NOESY ALIPHATIC REGION' 1 3 1 '3D 1H-13C NOESY AROMATIC REGION' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.227 _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;1.4 mM [U-99% 13C; U-98% 15N] nsp3(527-651), 25 mM sodium phosphate, 150 mM sodium chloride, 2 mM sodium azide, 10 % D2O, 90% H2O/10% D2O ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # _pdbx_nmr_spectrometer.field_strength 800 _pdbx_nmr_spectrometer.manufacturer Bruker _pdbx_nmr_spectrometer.model AVANCE _pdbx_nmr_spectrometer.spectrometer_id 1 _pdbx_nmr_spectrometer.type 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2JZE _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details ? _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'target function' _pdbx_nmr_ensemble.conformers_calculated_total_number 80 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2JZE _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 1.2 1 'Luginbuhl, Guntert, Billeter and Wuthrich' refinement OPAL ? 2 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2JZE _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2JZE _struct.title ;NMR structure of the domain 527-651 of the SARS-CoV nonstructural protein nsp3, single conformer closest to the mean coordinates of an ensemble of twenty energy minimized conformers ; _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2JZE _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text ;SARS-CoV, SARS-unique domain, nonstructural protein, nsp3, nsp3c, Functional and Structural Proteomics of SARS-CoV-Related Proteins, FSPS, PSI-2, Protein Structure Initiative, Joint Center for Structural Genomics, JCSG, ATP-binding, Cytoplasm, Endonuclease, Exonuclease, Helicase, Hydrolase, Membrane, Metal-binding, Nuclease, Nucleotide-binding, Nucleotidyltransferase, Protease, Ribosomal frameshift, RNA replication, RNA-binding, RNA-directed RNA polymerase, Thiol protease, Transferase, Transmembrane, Zinc, Zinc-finger, VIRAL PROTEIN ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 10 ? ARG A 22 ? ASN A 532 ARG A 544 1 ? 13 HELX_P HELX_P2 2 VAL A 31 ? TYR A 42 ? VAL A 553 TYR A 564 1 ? 12 HELX_P HELX_P3 3 PRO A 66 ? ASN A 78 ? PRO A 588 ASN A 600 1 ? 13 HELX_P HELX_P4 4 TYR A 88 ? GLY A 92 ? TYR A 610 GLY A 614 5 ? 5 HELX_P HELX_P5 5 ASN A 94 ? ARG A 103 ? ASN A 616 ARG A 625 1 ? 10 HELX_P HELX_P6 6 PRO A 116 ? SER A 128 ? PRO A 638 SER A 650 1 ? 13 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel B 1 2 ? parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 24 ? CYS A 28 ? LEU A 546 CYS A 550 A 2 ARG A 57 ? TYR A 61 ? ARG A 579 TYR A 583 A 3 GLY A 50 ? ASP A 53 ? GLY A 572 ASP A 575 B 1 LEU A 81 ? VAL A 82 ? LEU A 603 VAL A 604 B 2 ALA A 109 ? VAL A 110 ? ALA A 631 VAL A 632 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 27 ? N ILE A 549 O TYR A 61 ? O TYR A 583 A 2 3 O PHE A 60 ? O PHE A 582 N GLY A 50 ? N GLY A 572 B 1 2 N LEU A 81 ? N LEU A 603 O VAL A 110 ? O VAL A 632 # _atom_sites.entry_id 2JZE _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -4 -4 GLY GLY A . n A 1 2 SER 2 -3 -3 SER SER A . n A 1 3 HIS 3 -2 -2 HIS HIS A . n A 1 4 MET 4 -1 -1 MET MET A . n A 1 5 GLY 5 527 527 GLY GLY A . n A 1 6 THR 6 528 528 THR THR A . n A 1 7 VAL 7 529 529 VAL VAL A . n A 1 8 SER 8 530 530 SER SER A . n A 1 9 TRP 9 531 531 TRP TRP A . n A 1 10 ASN 10 532 532 ASN ASN A . n A 1 11 LEU 11 533 533 LEU LEU A . n A 1 12 ARG 12 534 534 ARG ARG A . n A 1 13 GLU 13 535 535 GLU GLU A . n A 1 14 MET 14 536 536 MET MET A . n A 1 15 LEU 15 537 537 LEU LEU A . n A 1 16 ALA 16 538 538 ALA ALA A . n A 1 17 HIS 17 539 539 HIS HIS A . n A 1 18 ALA 18 540 540 ALA ALA A . n A 1 19 GLU 19 541 541 GLU GLU A . n A 1 20 GLU 20 542 542 GLU GLU A . n A 1 21 THR 21 543 543 THR THR A . n A 1 22 ARG 22 544 544 ARG ARG A . n A 1 23 LYS 23 545 545 LYS LYS A . n A 1 24 LEU 24 546 546 LEU LEU A . n A 1 25 MET 25 547 547 MET MET A . n A 1 26 PRO 26 548 548 PRO PRO A . n A 1 27 ILE 27 549 549 ILE ILE A . n A 1 28 CYS 28 550 550 CYS CYS A . n A 1 29 MET 29 551 551 MET MET A . n A 1 30 ASP 30 552 552 ASP ASP A . n A 1 31 VAL 31 553 553 VAL VAL A . n A 1 32 ARG 32 554 554 ARG ARG A . n A 1 33 ALA 33 555 555 ALA ALA A . n A 1 34 ILE 34 556 556 ILE ILE A . n A 1 35 MET 35 557 557 MET MET A . n A 1 36 ALA 36 558 558 ALA ALA A . n A 1 37 THR 37 559 559 THR THR A . n A 1 38 ILE 38 560 560 ILE ILE A . n A 1 39 GLN 39 561 561 GLN GLN A . n A 1 40 ARG 40 562 562 ARG ARG A . n A 1 41 LYS 41 563 563 LYS LYS A . n A 1 42 TYR 42 564 564 TYR TYR A . n A 1 43 LYS 43 565 565 LYS LYS A . n A 1 44 GLY 44 566 566 GLY GLY A . n A 1 45 ILE 45 567 567 ILE ILE A . n A 1 46 LYS 46 568 568 LYS LYS A . n A 1 47 ILE 47 569 569 ILE ILE A . n A 1 48 GLN 48 570 570 GLN GLN A . n A 1 49 GLU 49 571 571 GLU GLU A . n A 1 50 GLY 50 572 572 GLY GLY A . n A 1 51 ILE 51 573 573 ILE ILE A . n A 1 52 VAL 52 574 574 VAL VAL A . n A 1 53 ASP 53 575 575 ASP ASP A . n A 1 54 TYR 54 576 576 TYR TYR A . n A 1 55 GLY 55 577 577 GLY GLY A . n A 1 56 VAL 56 578 578 VAL VAL A . n A 1 57 ARG 57 579 579 ARG ARG A . n A 1 58 PHE 58 580 580 PHE PHE A . n A 1 59 PHE 59 581 581 PHE PHE A . n A 1 60 PHE 60 582 582 PHE PHE A . n A 1 61 TYR 61 583 583 TYR TYR A . n A 1 62 THR 62 584 584 THR THR A . n A 1 63 SER 63 585 585 SER SER A . n A 1 64 LYS 64 586 586 LYS LYS A . n A 1 65 GLU 65 587 587 GLU GLU A . n A 1 66 PRO 66 588 588 PRO PRO A . n A 1 67 VAL 67 589 589 VAL VAL A . n A 1 68 ALA 68 590 590 ALA ALA A . n A 1 69 SER 69 591 591 SER SER A . n A 1 70 ILE 70 592 592 ILE ILE A . n A 1 71 ILE 71 593 593 ILE ILE A . n A 1 72 THR 72 594 594 THR THR A . n A 1 73 LYS 73 595 595 LYS LYS A . n A 1 74 LEU 74 596 596 LEU LEU A . n A 1 75 ASN 75 597 597 ASN ASN A . n A 1 76 SER 76 598 598 SER SER A . n A 1 77 LEU 77 599 599 LEU LEU A . n A 1 78 ASN 78 600 600 ASN ASN A . n A 1 79 GLU 79 601 601 GLU GLU A . n A 1 80 PRO 80 602 602 PRO PRO A . n A 1 81 LEU 81 603 603 LEU LEU A . n A 1 82 VAL 82 604 604 VAL VAL A . n A 1 83 THR 83 605 605 THR THR A . n A 1 84 MET 84 606 606 MET MET A . n A 1 85 PRO 85 607 607 PRO PRO A . n A 1 86 ILE 86 608 608 ILE ILE A . n A 1 87 GLY 87 609 609 GLY GLY A . n A 1 88 TYR 88 610 610 TYR TYR A . n A 1 89 VAL 89 611 611 VAL VAL A . n A 1 90 THR 90 612 612 THR THR A . n A 1 91 HIS 91 613 613 HIS HIS A . n A 1 92 GLY 92 614 614 GLY GLY A . n A 1 93 PHE 93 615 615 PHE PHE A . n A 1 94 ASN 94 616 616 ASN ASN A . n A 1 95 LEU 95 617 617 LEU LEU A . n A 1 96 GLU 96 618 618 GLU GLU A . n A 1 97 GLU 97 619 619 GLU GLU A . n A 1 98 ALA 98 620 620 ALA ALA A . n A 1 99 ALA 99 621 621 ALA ALA A . n A 1 100 ARG 100 622 622 ARG ARG A . n A 1 101 CYS 101 623 623 CYS CYS A . n A 1 102 MET 102 624 624 MET MET A . n A 1 103 ARG 103 625 625 ARG ARG A . n A 1 104 SER 104 626 626 SER SER A . n A 1 105 LEU 105 627 627 LEU LEU A . n A 1 106 LYS 106 628 628 LYS LYS A . n A 1 107 ALA 107 629 629 ALA ALA A . n A 1 108 PRO 108 630 630 PRO PRO A . n A 1 109 ALA 109 631 631 ALA ALA A . n A 1 110 VAL 110 632 632 VAL VAL A . n A 1 111 VAL 111 633 633 VAL VAL A . n A 1 112 SER 112 634 634 SER SER A . n A 1 113 VAL 113 635 635 VAL VAL A . n A 1 114 SER 114 636 636 SER SER A . n A 1 115 SER 115 637 637 SER SER A . n A 1 116 PRO 116 638 638 PRO PRO A . n A 1 117 ASP 117 639 639 ASP ASP A . n A 1 118 ALA 118 640 640 ALA ALA A . n A 1 119 VAL 119 641 641 VAL VAL A . n A 1 120 THR 120 642 642 THR THR A . n A 1 121 THR 121 643 643 THR THR A . n A 1 122 TYR 122 644 644 TYR TYR A . n A 1 123 ASN 123 645 645 ASN ASN A . n A 1 124 GLY 124 646 646 GLY GLY A . n A 1 125 TYR 125 647 647 TYR TYR A . n A 1 126 LEU 126 648 648 LEU LEU A . n A 1 127 THR 127 649 649 THR THR A . n A 1 128 SER 128 650 650 SER SER A . n A 1 129 SER 129 651 651 SER SER A . n # _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center JCSG _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-02-05 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 4 'Structure model' 1 3 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 4 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_spectrometer 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 4 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_spectrometer.model' 4 4 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'nsp3(527-651)' 1.4 mM '[U-99% 13C; U-98% 15N]' 1 'sodium phosphate' 25 mM ? 1 'sodium chloride' 150 mM ? 1 'sodium azide' 2 mM ? 1 D2O 10 % ? 1 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 HG1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 THR _pdbx_validate_close_contact.auth_seq_id_1 584 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OE1 _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 GLU _pdbx_validate_close_contact.auth_seq_id_2 587 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 1.58 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A -3 ? ? -149.62 -28.02 2 1 MET A -1 ? ? -118.06 -163.58 3 1 ARG A 544 ? ? 58.69 8.68 4 1 TYR A 610 ? ? -124.97 -140.53 5 1 SER A 650 ? ? 43.69 73.44 #