HEADER ELECTRON TRANSPORT 15-JAN-08 2JZR TITLE SOLUTION STRUCTURE OF THE OXIDIZED FORM (CYS67-CYS70) OF THE N- TITLE 2 TERMINAL DOMAIN OF PILB FROM N. MENINGITIDIS. COMPND MOL_ID: 1; COMPND 2 MOLECULE: PEPTIDE METHIONINE SULFOXIDE REDUCTASE MSRA/MSRB; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: THIOREDOXIN DOMAIN; COMPND 5 SYNONYM: THIOREDOXIN; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: NEISSERIA MENINGITIDIS SEROGROUP A; SOURCE 3 GENE: MSRAB, PILB; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_VECTOR: PETNTERPILB KEYWDS OXIDIZED, NEISSERIA MENINGITIDIS, PILB, N-TERMINAL DOMAIN, KEYWDS 2 THIOREDOXIN, ELECTRON TRANSPORT, MULTIFUNCTIONAL ENZYME, KEYWDS 3 OXIDOREDUCTASE, REDOX-ACTIVE CENTER, TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR M.QUINTERNET,P.TSAN,F.NEIERS,C.BEAUFILS,S.BOSCHI-MULLER,M.AVERLANT- AUTHOR 2 PETIT,G.BRANLANT,M.CUNG REVDAT 4 16-MAR-22 2JZR 1 REMARK SEQADV REVDAT 3 24-FEB-09 2JZR 1 VERSN REVDAT 2 26-AUG-08 2JZR 1 JRNL REVDAT 1 29-JUL-08 2JZR 0 JRNL AUTH M.QUINTERNET,P.TSAN,F.NEIERS,C.BEAUFILS,S.BOSCHI-MULLER, JRNL AUTH 2 M.C.AVERLANT-PETIT,G.BRANLANT,M.T.CUNG JRNL TITL SOLUTION STRUCTURE AND DYNAMICS OF THE REDUCED AND OXIDIZED JRNL TITL 2 FORMS OF THE N-TERMINAL DOMAIN OF PILB FROM NEISSERIA JRNL TITL 3 MENINGITIDIS. JRNL REF BIOCHEMISTRY V. 47 8577 2008 JRNL REFN ISSN 0006-2960 JRNL PMID 18651754 JRNL DOI 10.1021/BI800884W REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.0, CYANA 2.0 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2JZR COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JAN-08. REMARK 100 THE DEPOSITION ID IS D_1000100494. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 299 REMARK 210 PH : 7 REMARK 210 IONIC STRENGTH : 10 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 NTERPILBOX, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 1000 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 VAL A 2 78.00 -163.09 REMARK 500 1 PRO A 3 86.93 -69.79 REMARK 500 1 LEU A 69 -84.14 63.41 REMARK 500 1 HIS A 70 22.41 -156.81 REMARK 500 1 ASN A 95 91.58 -59.23 REMARK 500 1 PRO A 109 -179.72 -69.82 REMARK 500 1 ALA A 112 109.16 -167.15 REMARK 500 1 LYS A 125 69.51 -104.66 REMARK 500 1 GLU A 130 -79.09 -57.13 REMARK 500 1 ASP A 143 151.74 64.96 REMARK 500 2 PRO A 3 77.33 -69.81 REMARK 500 2 LYS A 22 -170.25 179.09 REMARK 500 2 PRO A 26 -178.29 -69.71 REMARK 500 2 ALA A 58 121.12 -179.31 REMARK 500 2 SER A 65 83.20 -150.01 REMARK 500 2 LEU A 69 -83.73 65.03 REMARK 500 2 HIS A 70 23.41 -160.23 REMARK 500 2 LEU A 84 -87.42 -87.78 REMARK 500 2 ASN A 85 33.33 173.96 REMARK 500 2 PRO A 90 83.70 -69.74 REMARK 500 2 ASN A 95 71.89 41.83 REMARK 500 2 PRO A 109 -178.81 -69.81 REMARK 500 2 ALA A 112 114.70 -167.94 REMARK 500 2 LYS A 125 62.84 -102.57 REMARK 500 2 ASN A 129 -169.17 -106.59 REMARK 500 3 HIS A 4 -169.61 51.63 REMARK 500 3 ASP A 24 -33.39 -178.16 REMARK 500 3 LEU A 69 -84.25 63.67 REMARK 500 3 HIS A 70 22.71 -157.74 REMARK 500 3 LEU A 84 -87.87 -95.57 REMARK 500 3 ASN A 85 34.17 172.56 REMARK 500 3 ASN A 95 89.50 -59.81 REMARK 500 3 GLU A 130 -78.97 -53.34 REMARK 500 4 PRO A 3 82.35 -69.79 REMARK 500 4 ASP A 24 -33.22 -174.36 REMARK 500 4 ALA A 58 120.15 -175.21 REMARK 500 4 LEU A 69 -84.33 63.27 REMARK 500 4 HIS A 70 21.99 -156.20 REMARK 500 4 ASN A 95 91.50 -58.61 REMARK 500 4 PRO A 109 -178.42 -69.73 REMARK 500 4 ALA A 112 111.04 -168.32 REMARK 500 4 LYS A 125 74.95 -105.40 REMARK 500 4 GLU A 130 -76.08 -53.83 REMARK 500 4 ALA A 142 106.06 -51.58 REMARK 500 5 VAL A 2 78.07 -173.53 REMARK 500 5 PRO A 3 78.45 -69.78 REMARK 500 5 LEU A 69 -81.85 65.77 REMARK 500 5 HIS A 70 24.91 -162.24 REMARK 500 5 LYS A 72 171.54 -57.35 REMARK 500 5 LEU A 84 -88.58 -89.89 REMARK 500 REMARK 500 THIS ENTRY HAS 244 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2JZS RELATED DB: PDB REMARK 900 RELATED ID: 15280 RELATED DB: BMRB DBREF 2JZR A 2 144 UNP Q9JWM8 MSRAB_NEIMA 34 176 SEQADV 2JZR MET A 1 UNP Q9JWM8 INITIATING METHIONINE SEQRES 1 A 144 MET VAL PRO HIS THR LEU SER THR LEU LYS THR ALA ASP SEQRES 2 A 144 ASN ARG PRO ALA SER VAL TYR LEU LYS LYS ASP LYS PRO SEQRES 3 A 144 THR LEU ILE LYS PHE TRP ALA SER TRP CYS PRO LEU CYS SEQRES 4 A 144 LEU SER GLU LEU GLY GLN THR GLU LYS TRP ALA GLN ASP SEQRES 5 A 144 ALA LYS PHE SER SER ALA ASN LEU ILE THR VAL ALA SER SEQRES 6 A 144 PRO GLY PHE LEU HIS GLU LYS LYS ASP GLY ASP PHE GLN SEQRES 7 A 144 LYS TRP TYR ALA GLY LEU ASN TYR PRO LYS LEU PRO VAL SEQRES 8 A 144 VAL THR ASP ASN GLY GLY THR ILE ALA GLN SER LEU ASN SEQRES 9 A 144 ILE SER VAL TYR PRO SER TRP ALA LEU ILE GLY LYS ASP SEQRES 10 A 144 GLY ASP VAL GLN ARG ILE VAL LYS GLY SER ILE ASN GLU SEQRES 11 A 144 ALA GLN ALA LEU ALA LEU ILE ARG ASP PRO ASN ALA ASP SEQRES 12 A 144 LEU HELIX 1 1 PRO A 3 LEU A 9 1 7 HELIX 2 2 PRO A 16 LEU A 21 5 6 HELIX 3 3 CYS A 36 SER A 41 1 6 HELIX 4 4 GLU A 42 ALA A 50 1 9 HELIX 5 5 GLN A 51 ALA A 58 5 8 HELIX 6 6 GLY A 75 ALA A 82 1 8 HELIX 7 7 GLY A 97 ASN A 104 1 8 HELIX 8 8 ASN A 129 ASP A 139 1 11 SHEET 1 A 6 LYS A 10 THR A 11 0 SHEET 2 A 6 VAL A 91 THR A 93 -1 O THR A 93 N LYS A 10 SHEET 3 A 6 ASN A 59 ALA A 64 1 N ALA A 64 O VAL A 92 SHEET 4 A 6 THR A 27 PHE A 31 1 N LEU A 28 O ILE A 61 SHEET 5 A 6 TRP A 111 ILE A 114 -1 O ALA A 112 N ILE A 29 SHEET 6 A 6 VAL A 120 VAL A 124 -1 O VAL A 124 N TRP A 111 SSBOND 1 CYS A 36 CYS A 39 1555 1555 2.08 CISPEP 1 TYR A 108 PRO A 109 1 0.00 CISPEP 2 TYR A 108 PRO A 109 2 -0.06 CISPEP 3 TYR A 108 PRO A 109 3 -0.08 CISPEP 4 TYR A 108 PRO A 109 4 -0.07 CISPEP 5 TYR A 108 PRO A 109 5 -0.01 CISPEP 6 TYR A 108 PRO A 109 6 -0.08 CISPEP 7 TYR A 108 PRO A 109 7 -0.10 CISPEP 8 TYR A 108 PRO A 109 8 -0.10 CISPEP 9 TYR A 108 PRO A 109 9 -0.11 CISPEP 10 TYR A 108 PRO A 109 10 -0.09 CISPEP 11 TYR A 108 PRO A 109 11 -0.09 CISPEP 12 TYR A 108 PRO A 109 12 -0.10 CISPEP 13 TYR A 108 PRO A 109 13 -0.03 CISPEP 14 TYR A 108 PRO A 109 14 -0.08 CISPEP 15 TYR A 108 PRO A 109 15 0.01 CISPEP 16 TYR A 108 PRO A 109 16 -0.16 CISPEP 17 TYR A 108 PRO A 109 17 -0.02 CISPEP 18 TYR A 108 PRO A 109 18 -0.04 CISPEP 19 TYR A 108 PRO A 109 19 0.03 CISPEP 20 TYR A 108 PRO A 109 20 0.03 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1