data_2JZV # _entry.id 2JZV # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2JZV pdb_00002jzv 10.2210/pdb2jzv/pdb RCSB RCSB100498 ? ? WWPDB D_1000100498 ? ? # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2JZV _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.recvd_initial_deposition_date 2008-01-21 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Seppala, R.' 1 'Tossavainen, H.' 2 'Heikkinen, S.' 3 'Koskela, H.' 4 'Kontinen, V.' 5 'Permi, P.' 6 # _citation.id primary _citation.title ;Solution structure of the parvulin-type PPIase domain of Staphylococcus aureus PrsA - Implications for the catalytic mechanism of parvulins. ; _citation.journal_abbrev 'Bmc Struct.Biol.' _citation.journal_volume 9 _citation.page_first 17 _citation.page_last 17 _citation.year 2009 _citation.journal_id_ASTM ? _citation.country UK _citation.journal_id_ISSN 1472-6807 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19309529 _citation.pdbx_database_id_DOI 10.1186/1472-6807-9-17 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Heikkinen, O.' 1 ? primary 'Seppala, R.' 2 ? primary 'Tossavainen, H.' 3 ? primary 'Heikkinen, S.' 4 ? primary 'Koskela, H.' 5 ? primary 'Permi, P.' 6 ? primary 'Kilpelainen, I.' 7 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Foldase protein prsA' _entity.formula_weight 12215.917 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec 5.2.1.8 _entity.pdbx_mutation ? _entity.pdbx_fragment 'UNP residues 140-245' _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GPLGSDSKKASHILIKVKSKKSDKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDK DFEKALFKLKDGEVSEVVKSSFGYHIIKADK ; _entity_poly.pdbx_seq_one_letter_code_can ;GPLGSDSKKASHILIKVKSKKSDKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDK DFEKALFKLKDGEVSEVVKSSFGYHIIKADK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 PRO n 1 3 LEU n 1 4 GLY n 1 5 SER n 1 6 ASP n 1 7 SER n 1 8 LYS n 1 9 LYS n 1 10 ALA n 1 11 SER n 1 12 HIS n 1 13 ILE n 1 14 LEU n 1 15 ILE n 1 16 LYS n 1 17 VAL n 1 18 LYS n 1 19 SER n 1 20 LYS n 1 21 LYS n 1 22 SER n 1 23 ASP n 1 24 LYS n 1 25 GLU n 1 26 GLY n 1 27 LEU n 1 28 ASP n 1 29 ASP n 1 30 LYS n 1 31 GLU n 1 32 ALA n 1 33 LYS n 1 34 GLN n 1 35 LYS n 1 36 ALA n 1 37 GLU n 1 38 GLU n 1 39 ILE n 1 40 GLN n 1 41 LYS n 1 42 GLU n 1 43 VAL n 1 44 SER n 1 45 LYS n 1 46 ASP n 1 47 PRO n 1 48 SER n 1 49 LYS n 1 50 PHE n 1 51 GLY n 1 52 GLU n 1 53 ILE n 1 54 ALA n 1 55 LYS n 1 56 LYS n 1 57 GLU n 1 58 SER n 1 59 MET n 1 60 ASP n 1 61 THR n 1 62 GLY n 1 63 SER n 1 64 ALA n 1 65 LYS n 1 66 LYS n 1 67 ASP n 1 68 GLY n 1 69 GLU n 1 70 LEU n 1 71 GLY n 1 72 TYR n 1 73 VAL n 1 74 LEU n 1 75 LYS n 1 76 GLY n 1 77 GLN n 1 78 THR n 1 79 ASP n 1 80 LYS n 1 81 ASP n 1 82 PHE n 1 83 GLU n 1 84 LYS n 1 85 ALA n 1 86 LEU n 1 87 PHE n 1 88 LYS n 1 89 LEU n 1 90 LYS n 1 91 ASP n 1 92 GLY n 1 93 GLU n 1 94 VAL n 1 95 SER n 1 96 GLU n 1 97 VAL n 1 98 VAL n 1 99 LYS n 1 100 SER n 1 101 SER n 1 102 PHE n 1 103 GLY n 1 104 TYR n 1 105 HIS n 1 106 ILE n 1 107 ILE n 1 108 LYS n 1 109 ALA n 1 110 ASP n 1 111 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene prsA _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 292B' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Staphylococcus aureus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1280 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector pGEX-2T _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PRSA_STAAM _struct_ref.pdbx_db_accession P60747 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;DSKKASHILIKVKSKKSDKEGLDDKEAKQKAEEIQKEVSKDPSKFGEIAKKESMDTGSAKKDGELGYVLKGQTDKDFEKA LFKLKDGEVSEVVKSSFGYHIIKADK ; _struct_ref.pdbx_align_begin 140 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2JZV _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 6 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 111 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P60747 _struct_ref_seq.db_align_beg 140 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 245 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 140 _struct_ref_seq.pdbx_auth_seq_align_end 245 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2JZV GLY A 1 ? UNP P60747 ? ? 'expression tag' -5 1 1 2JZV PRO A 2 ? UNP P60747 ? ? 'expression tag' -4 2 1 2JZV LEU A 3 ? UNP P60747 ? ? 'expression tag' -3 3 1 2JZV GLY A 4 ? UNP P60747 ? ? 'expression tag' -2 4 1 2JZV SER A 5 ? UNP P60747 ? ? 'expression tag' -1 5 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 2 '2D 1H-15N HSQC' 1 2 2 '2D 1H-13C HSQC' 1 3 2 '3D CBCA(CO)NH' 1 4 2 '3D C(CO)NH' 1 5 2 '3D HNCO' 1 6 2 '3D HNCACB' 1 7 2 '3D HN(CO)CA' 1 8 2 '3D H(CCO)NH' 1 9 2 '3D HCCH-TOCSY' 1 10 2 '3D HCCH-COSY' 1 11 2 '3D 1H-15N NOESY' 1 12 2 '3D 1H-13C NOESY' 1 13 2 '3D iHNCA' 1 14 2 '3D 1H-13C NOESY (AROM)' 1 15 2 '(H )C (C C )H' 1 16 2 '(H )C (C C C )H' 1 17 2 'J(CN) intensity modulated constant time 13C-HSQC' 1 18 1 '3D R1 resolved 1H-15N-HSQC' 1 19 1 '3D R2 resolved 1H-15N-HSQC' 1 20 1 'exchange rate resolved 1H-15N-HSQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 20 _pdbx_nmr_exptl_sample_conditions.pH 6.8 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '0.3 mM [U-15N] PrsA-PPIase, 20 mM Bis-TRIS, 1 mM sodium azide, 1 mM EDTA, 92% H2O/8% D2O' 1 '92% H2O/8% D2O' '1 mM [U-15N] PrsA-PPIase, 20 mM Bis-TRIS, 1 mM sodium azide, 1 mM EDTA, 92% H2O/8% D2O' 2 '92% H2O/8% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 800 Varian INOVA 1 'Varian INOVA' 600 Varian INOVA 2 'Varian INOVA' 500 Varian INOVA 3 'Varian INOVA' 500 Bruker DRX 4 'Bruker DRX' # _pdbx_nmr_refine.entry_id 2JZV _pdbx_nmr_refine.method 'molecular dynamics' _pdbx_nmr_refine.details 'Structures were refined with molecular dynamics using Born implicit solvent model in AMBER 8.0' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 400 _pdbx_nmr_ensemble.conformers_submitted_total_number 25 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2JZV _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation 0.16 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2JZV _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Varian collection VNMR 6.1C 1 Varian processing VNMR 6.1C 2 Goddard 'chemical shift assignment' Sparky 3.110 3 Goddard 'data analysis' Sparky 3.110 4 Goddard 'peak picking' Sparky 3.110 5 'Cornilescu, Delaglio and Bax' 'data analysis' TALOS 2003.027.13.05 6 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 2.1 7 'Case, Darden, Cheatham, III, Simmerling, Wang, Duke, Luo, ... and Kollm' refinement Amber 8.0 8 'Laskowski and MacArthur' 'quality control' ProcheckNMR ? 9 Vriend 'quality control' What_check ? 10 # _exptl.details ? _exptl.method 'SOLUTION NMR' _exptl.entry_id 2JZV _exptl.crystals_number ? # _struct.entry_id 2JZV _struct.title 'Solution structure of S. aureus PrsA-PPIase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2JZV _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.text 'PPIase, parvulin, foldase, Staphylococcus aureus, proline isomerase, Lipoprotein, Membrane, Palmitate, Rotamase, ISOMERASE' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 28 ? LYS A 45 ? ASP A 162 LYS A 179 1 ? 18 HELX_P HELX_P2 2 LYS A 49 ? SER A 58 ? LYS A 183 SER A 192 1 ? 10 HELX_P HELX_P3 3 ASP A 60 ? LYS A 65 ? ASP A 194 LYS A 199 1 ? 6 HELX_P HELX_P4 4 ASP A 79 ? LYS A 88 ? ASP A 213 LYS A 222 1 ? 10 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 4 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 69 ? LEU A 74 ? GLU A 203 LEU A 208 A 2 SER A 7 ? LYS A 16 ? SER A 141 LYS A 150 A 3 GLY A 103 ? ALA A 109 ? GLY A 237 ALA A 243 A 4 VAL A 98 ? SER A 100 ? VAL A 232 SER A 234 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 O VAL A 73 ? O VAL A 207 N LYS A 8 ? N LYS A 142 A 2 3 N ILE A 15 ? N ILE A 149 O TYR A 104 ? O TYR A 238 A 3 4 O HIS A 105 ? O HIS A 239 N VAL A 98 ? N VAL A 232 # _atom_sites.entry_id 2JZV _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -5 -5 GLY GLY A . n A 1 2 PRO 2 -4 -4 PRO PRO A . n A 1 3 LEU 3 -3 -3 LEU LEU A . n A 1 4 GLY 4 -2 -2 GLY GLY A . n A 1 5 SER 5 -1 -1 SER SER A . n A 1 6 ASP 6 140 140 ASP ASP A . n A 1 7 SER 7 141 141 SER SER A . n A 1 8 LYS 8 142 142 LYS LYS A . n A 1 9 LYS 9 143 143 LYS LYS A . n A 1 10 ALA 10 144 144 ALA ALA A . n A 1 11 SER 11 145 145 SER SER A . n A 1 12 HIS 12 146 146 HIS HIS A . n A 1 13 ILE 13 147 147 ILE ILE A . n A 1 14 LEU 14 148 148 LEU LEU A . n A 1 15 ILE 15 149 149 ILE ILE A . n A 1 16 LYS 16 150 150 LYS LYS A . n A 1 17 VAL 17 151 151 VAL VAL A . n A 1 18 LYS 18 152 152 LYS LYS A . n A 1 19 SER 19 153 153 SER SER A . n A 1 20 LYS 20 154 154 LYS LYS A . n A 1 21 LYS 21 155 155 LYS LYS A . n A 1 22 SER 22 156 156 SER SER A . n A 1 23 ASP 23 157 157 ASP ASP A . n A 1 24 LYS 24 158 158 LYS LYS A . n A 1 25 GLU 25 159 159 GLU GLU A . n A 1 26 GLY 26 160 160 GLY GLY A . n A 1 27 LEU 27 161 161 LEU LEU A . n A 1 28 ASP 28 162 162 ASP ASP A . n A 1 29 ASP 29 163 163 ASP ASP A . n A 1 30 LYS 30 164 164 LYS LYS A . n A 1 31 GLU 31 165 165 GLU GLU A . n A 1 32 ALA 32 166 166 ALA ALA A . n A 1 33 LYS 33 167 167 LYS LYS A . n A 1 34 GLN 34 168 168 GLN GLN A . n A 1 35 LYS 35 169 169 LYS LYS A . n A 1 36 ALA 36 170 170 ALA ALA A . n A 1 37 GLU 37 171 171 GLU GLU A . n A 1 38 GLU 38 172 172 GLU GLU A . n A 1 39 ILE 39 173 173 ILE ILE A . n A 1 40 GLN 40 174 174 GLN GLN A . n A 1 41 LYS 41 175 175 LYS LYS A . n A 1 42 GLU 42 176 176 GLU GLU A . n A 1 43 VAL 43 177 177 VAL VAL A . n A 1 44 SER 44 178 178 SER SER A . n A 1 45 LYS 45 179 179 LYS LYS A . n A 1 46 ASP 46 180 180 ASP ASP A . n A 1 47 PRO 47 181 181 PRO PRO A . n A 1 48 SER 48 182 182 SER SER A . n A 1 49 LYS 49 183 183 LYS LYS A . n A 1 50 PHE 50 184 184 PHE PHE A . n A 1 51 GLY 51 185 185 GLY GLY A . n A 1 52 GLU 52 186 186 GLU GLU A . n A 1 53 ILE 53 187 187 ILE ILE A . n A 1 54 ALA 54 188 188 ALA ALA A . n A 1 55 LYS 55 189 189 LYS LYS A . n A 1 56 LYS 56 190 190 LYS LYS A . n A 1 57 GLU 57 191 191 GLU GLU A . n A 1 58 SER 58 192 192 SER SER A . n A 1 59 MET 59 193 193 MET MET A . n A 1 60 ASP 60 194 194 ASP ASP A . n A 1 61 THR 61 195 195 THR THR A . n A 1 62 GLY 62 196 196 GLY GLY A . n A 1 63 SER 63 197 197 SER SER A . n A 1 64 ALA 64 198 198 ALA ALA A . n A 1 65 LYS 65 199 199 LYS LYS A . n A 1 66 LYS 66 200 200 LYS LYS A . n A 1 67 ASP 67 201 201 ASP ASP A . n A 1 68 GLY 68 202 202 GLY GLY A . n A 1 69 GLU 69 203 203 GLU GLU A . n A 1 70 LEU 70 204 204 LEU LEU A . n A 1 71 GLY 71 205 205 GLY GLY A . n A 1 72 TYR 72 206 206 TYR TYR A . n A 1 73 VAL 73 207 207 VAL VAL A . n A 1 74 LEU 74 208 208 LEU LEU A . n A 1 75 LYS 75 209 209 LYS LYS A . n A 1 76 GLY 76 210 210 GLY GLY A . n A 1 77 GLN 77 211 211 GLN GLN A . n A 1 78 THR 78 212 212 THR THR A . n A 1 79 ASP 79 213 213 ASP ASP A . n A 1 80 LYS 80 214 214 LYS LYS A . n A 1 81 ASP 81 215 215 ASP ASP A . n A 1 82 PHE 82 216 216 PHE PHE A . n A 1 83 GLU 83 217 217 GLU GLU A . n A 1 84 LYS 84 218 218 LYS LYS A . n A 1 85 ALA 85 219 219 ALA ALA A . n A 1 86 LEU 86 220 220 LEU LEU A . n A 1 87 PHE 87 221 221 PHE PHE A . n A 1 88 LYS 88 222 222 LYS LYS A . n A 1 89 LEU 89 223 223 LEU LEU A . n A 1 90 LYS 90 224 224 LYS LYS A . n A 1 91 ASP 91 225 225 ASP ASP A . n A 1 92 GLY 92 226 226 GLY GLY A . n A 1 93 GLU 93 227 227 GLU GLU A . n A 1 94 VAL 94 228 228 VAL VAL A . n A 1 95 SER 95 229 229 SER SER A . n A 1 96 GLU 96 230 230 GLU GLU A . n A 1 97 VAL 97 231 231 VAL VAL A . n A 1 98 VAL 98 232 232 VAL VAL A . n A 1 99 LYS 99 233 233 LYS LYS A . n A 1 100 SER 100 234 234 SER SER A . n A 1 101 SER 101 235 235 SER SER A . n A 1 102 PHE 102 236 236 PHE PHE A . n A 1 103 GLY 103 237 237 GLY GLY A . n A 1 104 TYR 104 238 238 TYR TYR A . n A 1 105 HIS 105 239 239 HIS HIS A . n A 1 106 ILE 106 240 240 ILE ILE A . n A 1 107 ILE 107 241 241 ILE ILE A . n A 1 108 LYS 108 242 242 LYS LYS A . n A 1 109 ALA 109 243 243 ALA ALA A . n A 1 110 ASP 110 244 244 ASP ASP A . n A 1 111 LYS 111 245 245 LYS LYS A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-01-20 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_struct_assembly 4 3 'Structure model' pdbx_struct_oper_list 5 3 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_struct_ref_seq_dif.details' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id PrsA-PPIase 0.3 mM '[U-15N]' 1 Bis-TRIS 20 mM ? 1 'sodium azide' 1 mM ? 1 EDTA 1 mM ? 1 PrsA-PPIase 1 mM '[U-15N]' 2 Bis-TRIS 20 mM ? 2 'sodium azide' 1 mM ? 2 EDTA 1 mM ? 2 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 2161 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count ? _pdbx_nmr_constraints.NOE_long_range_total_count ? _pdbx_nmr_constraints.NOE_medium_range_total_count ? _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count ? _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2JZV # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 229 ? ? -80.40 -107.21 2 1 GLU A 230 ? ? -173.28 -177.26 3 2 GLU A 159 ? ? -170.82 133.00 4 2 ASP A 201 ? ? 74.00 31.98 5 2 ASP A 244 ? ? -100.02 -163.89 6 3 LYS A 158 ? ? 69.66 -23.03 7 6 ASP A 140 ? ? -143.47 30.36 8 6 ASP A 180 ? ? -151.59 89.75 9 7 ASP A 201 ? ? 83.83 25.18 10 9 ASP A 140 ? ? -76.40 46.23 11 11 SER A -1 ? ? -96.95 -106.24 12 11 ASP A 201 ? ? 76.49 31.45 13 15 ASP A 201 ? ? 81.83 33.69 14 16 ASP A 244 ? ? -111.69 -167.58 15 17 LYS A 154 ? ? 56.07 3.86 16 17 ASP A 201 ? ? 81.59 29.08 17 18 ASP A 180 ? ? -151.47 86.50 18 20 GLU A 159 ? ? -80.56 -95.35 19 21 ASP A 180 ? ? -157.11 86.74 20 22 ASP A 180 ? ? -152.46 84.24 21 23 ASP A 201 ? ? 81.41 20.11 22 25 ASP A 201 ? ? 82.74 31.75 #