HEADER TRANSCRIPTION 25-JAN-08 2K06 TITLE SOLUTION STRUCTURE OF THE AMINOTERMINAL DOMAIN OF E. COLI NUSG COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANSCRIPTION ANTITERMINATION PROTEIN NUSG; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN, RESIDUES 1-123; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 GENE: NUSG; SOURCE 4 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 5 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 6 EXPRESSION_SYSTEM_VECTOR: PET11A KEYWDS NUSG, TRANSCRIPTION, TRANSCRIPTION ANTITERMINATION, TRANSCRIPTION KEYWDS 2 REGULATION, TRANSCRIPTION TERMINATION EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR K.SCHWEIMER,U.SCHECKENHOFER,P.ROESCH REVDAT 3 19-FEB-20 2K06 1 REMARK REVDAT 2 13-AUG-14 2K06 1 JRNL VERSN REVDAT 1 03-FEB-09 2K06 0 JRNL AUTH R.A.MOONEY,K.SCHWEIMER,P.ROSCH,M.GOTTESMAN,R.LANDICK JRNL TITL TWO STRUCTURALLY INDEPENDENT DOMAINS OF E. COLI NUSG CREATE JRNL TITL 2 REGULATORY PLASTICITY VIA DISTINCT INTERACTIONS WITH RNA JRNL TITL 3 POLYMERASE AND REGULATORS. JRNL REF J.MOL.BIOL. V. 391 341 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19500594 JRNL DOI 10.1016/J.JMB.2009.05.078 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRVIEW, X-PLOR NIH REMARK 3 AUTHORS : JOHNSON, ONE MOON SCIENTIFIC (NMRVIEW), REMARK 3 SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X-PLOR REMARK 3 NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K06 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-FEB-08. REMARK 100 THE DEPOSITION ID IS D_1000100509. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.4 REMARK 210 IONIC STRENGTH : NULL REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.4 MM [U-98% 13C; U-98% 15N] REMARK 210 NUSG, 10 MM POTASSIUM PHOSPHATE, REMARK 210 50 MM SODIUM CHLORIDE, 90% H2O/ REMARK 210 10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D HNCA; 3D HNCACB; 3D REMARK 210 CBCA(CO)NH; 3D HCCH-TOCSY; 3D 1H- REMARK 210 15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 800 MHZ; 700 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW, X-PLOR NIH REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ARG A 57 HG SER A 60 1.59 REMARK 500 SD MET A 43 SD MET A 112 2.13 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ARG A 99 96.39 -168.28 REMARK 500 2 ALA A 78 -70.14 -78.25 REMARK 500 2 ASP A 98 -33.24 -130.17 REMARK 500 3 ALA A 78 -71.88 -70.02 REMARK 500 3 PRO A 87 -177.77 -69.65 REMARK 500 4 ALA A 14 -153.23 -138.72 REMARK 500 4 GLU A 47 86.00 50.83 REMARK 500 4 ARG A 53 135.40 64.07 REMARK 500 4 ALA A 78 -70.26 -75.57 REMARK 500 4 ARG A 99 92.51 -176.69 REMARK 500 5 MET A 73 156.70 172.94 REMARK 500 5 ALA A 78 -70.96 -72.02 REMARK 500 5 ARG A 99 95.72 -170.88 REMARK 500 6 GLU A 3 25.77 46.44 REMARK 500 6 ALA A 4 139.96 62.06 REMARK 500 7 MET A 73 149.09 -177.89 REMARK 500 7 VAL A 118 16.93 58.21 REMARK 500 8 VAL A 50 25.05 45.90 REMARK 500 8 GLU A 51 104.28 57.19 REMARK 500 8 ARG A 99 99.24 -161.42 REMARK 500 9 PRO A 45 0.27 -69.69 REMARK 500 9 GLU A 61 125.78 61.13 REMARK 500 9 MET A 73 151.19 177.83 REMARK 500 9 ALA A 78 -72.43 -74.02 REMARK 500 9 ASP A 120 -38.92 -171.49 REMARK 500 10 LYS A 6 30.21 -93.06 REMARK 500 10 ALA A 14 -168.28 53.62 REMARK 500 10 GLU A 47 126.19 62.05 REMARK 500 10 MET A 73 154.69 173.57 REMARK 500 10 ALA A 78 -72.41 -74.87 REMARK 500 10 PRO A 87 -166.87 -69.12 REMARK 500 10 LYS A 121 -66.28 -160.26 REMARK 500 11 GLU A 47 177.36 51.25 REMARK 500 11 LYS A 59 66.87 73.77 REMARK 500 11 ASN A 76 -143.76 -133.74 REMARK 500 12 ALA A 4 78.37 -117.94 REMARK 500 12 GLU A 47 -163.34 44.11 REMARK 500 12 ALA A 78 -50.21 -149.88 REMARK 500 13 GLU A 48 81.43 43.41 REMARK 500 13 MET A 73 165.19 174.07 REMARK 500 13 ALA A 78 -72.78 -74.47 REMARK 500 13 ARG A 99 99.57 -164.73 REMARK 500 13 LYS A 121 74.64 -119.86 REMARK 500 14 ALA A 14 -153.39 -156.92 REMARK 500 14 ALA A 78 -72.36 -71.50 REMARK 500 15 SER A 60 112.15 -177.48 REMARK 500 15 PHE A 65 101.08 -42.19 REMARK 500 15 ALA A 78 -71.31 -70.58 REMARK 500 15 PRO A 87 -174.03 -69.02 REMARK 500 15 ASP A 98 11.05 -140.73 REMARK 500 REMARK 500 THIS ENTRY HAS 68 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 1 ARG A 8 0.31 SIDE CHAIN REMARK 500 1 ARG A 21 0.32 SIDE CHAIN REMARK 500 1 ARG A 27 0.22 SIDE CHAIN REMARK 500 1 ARG A 53 0.28 SIDE CHAIN REMARK 500 1 ARG A 57 0.30 SIDE CHAIN REMARK 500 1 ARG A 58 0.28 SIDE CHAIN REMARK 500 1 ARG A 62 0.30 SIDE CHAIN REMARK 500 1 ARG A 84 0.32 SIDE CHAIN REMARK 500 1 ARG A 88 0.18 SIDE CHAIN REMARK 500 1 ARG A 99 0.26 SIDE CHAIN REMARK 500 1 ARG A 114 0.20 SIDE CHAIN REMARK 500 1 ARG A 123 0.27 SIDE CHAIN REMARK 500 2 ARG A 8 0.30 SIDE CHAIN REMARK 500 2 ARG A 21 0.32 SIDE CHAIN REMARK 500 2 ARG A 27 0.29 SIDE CHAIN REMARK 500 2 ARG A 53 0.20 SIDE CHAIN REMARK 500 2 ARG A 57 0.31 SIDE CHAIN REMARK 500 2 ARG A 58 0.29 SIDE CHAIN REMARK 500 2 ARG A 62 0.22 SIDE CHAIN REMARK 500 2 ARG A 84 0.32 SIDE CHAIN REMARK 500 2 ARG A 88 0.21 SIDE CHAIN REMARK 500 2 ARG A 99 0.18 SIDE CHAIN REMARK 500 2 ARG A 114 0.31 SIDE CHAIN REMARK 500 2 ARG A 123 0.28 SIDE CHAIN REMARK 500 3 ARG A 8 0.31 SIDE CHAIN REMARK 500 3 ARG A 21 0.26 SIDE CHAIN REMARK 500 3 ARG A 27 0.23 SIDE CHAIN REMARK 500 3 ARG A 53 0.26 SIDE CHAIN REMARK 500 3 ARG A 57 0.32 SIDE CHAIN REMARK 500 3 ARG A 58 0.29 SIDE CHAIN REMARK 500 3 ARG A 62 0.24 SIDE CHAIN REMARK 500 3 ARG A 84 0.20 SIDE CHAIN REMARK 500 3 ARG A 88 0.14 SIDE CHAIN REMARK 500 3 ARG A 99 0.28 SIDE CHAIN REMARK 500 3 ARG A 114 0.26 SIDE CHAIN REMARK 500 3 ARG A 123 0.31 SIDE CHAIN REMARK 500 4 ARG A 8 0.32 SIDE CHAIN REMARK 500 4 ARG A 21 0.30 SIDE CHAIN REMARK 500 4 ARG A 27 0.14 SIDE CHAIN REMARK 500 4 ARG A 57 0.22 SIDE CHAIN REMARK 500 4 ARG A 58 0.19 SIDE CHAIN REMARK 500 4 ARG A 62 0.18 SIDE CHAIN REMARK 500 4 ARG A 84 0.16 SIDE CHAIN REMARK 500 4 ARG A 99 0.21 SIDE CHAIN REMARK 500 4 ARG A 114 0.25 SIDE CHAIN REMARK 500 4 ARG A 123 0.29 SIDE CHAIN REMARK 500 5 ARG A 8 0.09 SIDE CHAIN REMARK 500 5 ARG A 21 0.31 SIDE CHAIN REMARK 500 5 ARG A 27 0.29 SIDE CHAIN REMARK 500 5 ARG A 53 0.32 SIDE CHAIN REMARK 500 REMARK 500 THIS ENTRY HAS 231 PLANE DEVIATIONS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15642 RELATED DB: BMRB DBREF 2K06 A 1 123 UNP P0AFG0 NUSG_ECOLI 1 123 SEQRES 1 A 123 MET SER GLU ALA PRO LYS LYS ARG TRP TYR VAL VAL GLN SEQRES 2 A 123 ALA PHE SER GLY PHE GLU GLY ARG VAL ALA THR SER LEU SEQRES 3 A 123 ARG GLU HIS ILE LYS LEU HIS ASN MET GLU ASP LEU PHE SEQRES 4 A 123 GLY GLU VAL MET VAL PRO THR GLU GLU VAL VAL GLU ILE SEQRES 5 A 123 ARG GLY GLY GLN ARG ARG LYS SER GLU ARG LYS PHE PHE SEQRES 6 A 123 PRO GLY TYR VAL LEU VAL GLN MET VAL MET ASN ASP ALA SEQRES 7 A 123 SER TRP HIS LEU VAL ARG SER VAL PRO ARG VAL MET GLY SEQRES 8 A 123 PHE ILE GLY GLY THR SER ASP ARG PRO ALA PRO ILE SER SEQRES 9 A 123 ASP LYS GLU VAL ASP ALA ILE MET ASN ARG LEU GLN GLN SEQRES 10 A 123 VAL GLY ASP LYS PRO ARG HELIX 1 1 PHE A 18 ASN A 34 1 17 HELIX 2 2 ASN A 76 VAL A 86 1 11 HELIX 3 3 SER A 104 GLN A 117 1 14 SHEET 1 A 3 TYR A 68 MET A 73 0 SHEET 2 A 3 ARG A 8 ALA A 14 -1 N ARG A 8 O MET A 73 SHEET 3 A 3 VAL A 89 ILE A 93 -1 O GLY A 91 N GLN A 13 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1