data_2K0Q # _entry.id 2K0Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2K0Q pdb_00002k0q 10.2210/pdb2k0q/pdb RCSB RCSB100529 ? ? WWPDB D_1000100529 ? ? # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2K0Q _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-02-12 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Bersch, B.' 1 'Favier, A.' 2 'Schanda, P.' 3 'Coves, J.' 4 'van Aelst, S.' 5 'Vallaeys, T.' 6 'Wattiez, R.' 7 'Mergeay, M.' 8 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Molecular structure and metal-binding properties of the periplasmic CopK protein expressed in Cupriavidus metallidurans CH34 during copper challenge. ; J.Mol.Biol. 380 386 403 2008 JMOBAK UK 0022-2836 0070 ? 18533181 10.1016/j.jmb.2008.05.017 1 'Transcriptomic and proteomic analyses of the pMOL30-encoded copper resistance in Cupriavidus metallidurans strain CH34.' Microbiology 152 1765 1776 2006 ? US 0026-2617 ? ? 16735739 10.1099/mic.0.28593-0 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Bersch, B.' 1 ? primary 'Favier, A.' 2 ? primary 'Schanda, P.' 3 ? primary 'van Aelst, S.' 4 ? primary 'Vallaeys, T.' 5 ? primary 'Coves, J.' 6 ? primary 'Mergeay, M.' 7 ? primary 'Wattiez, R.' 8 ? 1 'Monchy, S.' 9 ? 1 'Benotmane, M.A.' 10 ? 1 'Wattiez, R.' 11 ? 1 'van Aelst, S.' 12 ? 1 'Auquier, V.' 13 ? 1 'Borremans, B.' 14 ? 1 'Mergeay, M.' 15 ? 1 'Taghavi, S.' 16 ? 1 'van der Lelie, D.' 17 ? 1 'Vallaeys, T.' 18 ? # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'Putative uncharacterized protein copK' _entity.formula_weight 8294.567 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code VDMSNVVKTYDLQDGSKVHVFKDGKMGMENKFGKSMNMPEGKVMETRDGTKIIMKGNEIFRLDEALRKGHSEGG _entity_poly.pdbx_seq_one_letter_code_can VDMSNVVKTYDLQDGSKVHVFKDGKMGMENKFGKSMNMPEGKVMETRDGTKIIMKGNEIFRLDEALRKGHSEGG _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 VAL n 1 2 ASP n 1 3 MET n 1 4 SER n 1 5 ASN n 1 6 VAL n 1 7 VAL n 1 8 LYS n 1 9 THR n 1 10 TYR n 1 11 ASP n 1 12 LEU n 1 13 GLN n 1 14 ASP n 1 15 GLY n 1 16 SER n 1 17 LYS n 1 18 VAL n 1 19 HIS n 1 20 VAL n 1 21 PHE n 1 22 LYS n 1 23 ASP n 1 24 GLY n 1 25 LYS n 1 26 MET n 1 27 GLY n 1 28 MET n 1 29 GLU n 1 30 ASN n 1 31 LYS n 1 32 PHE n 1 33 GLY n 1 34 LYS n 1 35 SER n 1 36 MET n 1 37 ASN n 1 38 MET n 1 39 PRO n 1 40 GLU n 1 41 GLY n 1 42 LYS n 1 43 VAL n 1 44 MET n 1 45 GLU n 1 46 THR n 1 47 ARG n 1 48 ASP n 1 49 GLY n 1 50 THR n 1 51 LYS n 1 52 ILE n 1 53 ILE n 1 54 MET n 1 55 LYS n 1 56 GLY n 1 57 ASN n 1 58 GLU n 1 59 ILE n 1 60 PHE n 1 61 ARG n 1 62 LEU n 1 63 ASP n 1 64 GLU n 1 65 ALA n 1 66 LEU n 1 67 ARG n 1 68 LYS n 1 69 GLY n 1 70 HIS n 1 71 SER n 1 72 GLU n 1 73 GLY n 1 74 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene copK _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain CH34 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'CUPRIAVIDUS METALLIDURANS' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id ? _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET30 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q58AD3_RALME _struct_ref.pdbx_db_accession Q58AD3 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code VDMSNVVKTYDLQDGSKVHVFKDGKMGMENKFGKSMNMPEGKVMETRDGTKIIMKGNEIFRLDEALRKGHSEGG _struct_ref.pdbx_align_begin 21 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2K0Q _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 74 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q58AD3 _struct_ref_seq.db_align_beg 21 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 94 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 74 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 2 '2D 1H-15N HSQC' 1 2 1 '3D HNCACB' 1 3 1 '3D H(CCO)NH' 1 4 1 '3D C(CO)NH' 1 5 1 '3D HCCH-TOCSY' 1 6 4 '2D 1H-1H NOESY' 1 7 3 '3D HNCO-type' 1 8 3 '3D HNCO-type' 1 9 2 relaxation 1 10 2 '3D 15N NOESY-HSQC' 1 11 2 2D-Sofast 1 12 5 relaxation # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 0.1 _pdbx_nmr_exptl_sample_conditions.pH 6.0 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '1.5 mM [U-100% 13C; U-100% 15N] CopK, 50 mM MES, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '1.5 mM [U-100% 15N] CopK, 50 mM MES, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' '1.5 mM CopK, 50 mM MES, 5 % C12E5, 5 % hexanol, 90% H2O/10% D2O' 3 '90% H2O/10% D2O' '1.5 mM CopK, 50 mM MES, 100% D2O' 4 '100% D2O' '0.5 mM [U-100% 15N] CopK, 50 mM MES, 90% H2O/10% D2O' 5 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Varian INOVA 1 'Varian INOVA' 600 Varian 'Direct Drive' 2 'Varian DirectDrive' 800 Varian INOVA 3 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2K0Q _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ;ATNOS/CANDID interfaced to CNS, ARIA 1.2 with ATNOS/CANDID + dihedral (Talos) restraints, water refinement, ARIA 1.2 with ATNOS/CANDID, dihedral (Talos) and rdc restraints, water refinement ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 1000 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2K0Q _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2K0Q _pdbx_nmr_representative.selection_criteria 'closest to the average' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal Varian collection VnmrJ ? 1 'Delaglio, F. et al.' processing NMRPipe ? 2 'Johnson, B.A. et al.' 'chemical shift assignment' NMRView ? 3 'Johnson, B.A. et al.' 'peak picking' NMRView ? 4 'Johnson, B.A. et al.' 'data analysis' NMRView ? 5 'Delaglio, F. et al.' 'peak picking' NMRDraw ? 6 'Delaglio, F. et al.' 'geometry optimization' NMRDraw ? 7 'Cornilescu, G. et al.' 'data analysis' TALOS ? 8 'Dosset, P. et al.' 'data analysis' TENSOR ? 9 'Dosset, P. et al.' 'data analysis' Module ? 10 'Brunger, A.T. et al.' refinement CNS ? 11 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2K0Q _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2K0Q _struct.title 'Solution structure of CopK, a periplasmic protein involved in copper resistance in Cupriavidus metallidurans CH34' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2K0Q _struct_keywords.pdbx_keywords 'METAL BINDING PROTEIN' _struct_keywords.text 'copper, heavy metal resistance, open barrel, Plasmid-ENCODED, METAL BINDING PROTEIN' # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id ASP _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 63 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id LYS _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 68 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id ASP _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 63 _struct_conf.end_auth_comp_id LYS _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 68 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 6 ? ASP A 11 ? VAL A 6 ASP A 11 A 2 LYS A 17 ? PHE A 21 ? LYS A 17 PHE A 21 A 3 MET A 26 ? GLU A 29 ? MET A 26 GLU A 29 A 4 SER A 35 ? MET A 36 ? SER A 35 MET A 36 B 1 VAL A 43 ? GLU A 45 ? VAL A 43 GLU A 45 B 2 LYS A 51 ? LYS A 55 ? LYS A 51 LYS A 55 B 3 GLU A 58 ? ARG A 61 ? GLU A 58 ARG A 61 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N TYR A 10 ? N TYR A 10 O VAL A 18 ? O VAL A 18 A 2 3 N LYS A 17 ? N LYS A 17 O GLU A 29 ? O GLU A 29 A 3 4 N MET A 28 ? N MET A 28 O MET A 36 ? O MET A 36 B 1 2 N MET A 44 ? N MET A 44 O ILE A 52 ? O ILE A 52 B 2 3 N ILE A 53 ? N ILE A 53 O PHE A 60 ? O PHE A 60 # _atom_sites.entry_id 2K0Q _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 VAL 1 1 1 VAL VAL A . n A 1 2 ASP 2 2 2 ASP ASP A . n A 1 3 MET 3 3 3 MET MET A . n A 1 4 SER 4 4 4 SER SER A . n A 1 5 ASN 5 5 5 ASN ASN A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 VAL 7 7 7 VAL VAL A . n A 1 8 LYS 8 8 8 LYS LYS A . n A 1 9 THR 9 9 9 THR THR A . n A 1 10 TYR 10 10 10 TYR TYR A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 LEU 12 12 12 LEU LEU A . n A 1 13 GLN 13 13 13 GLN GLN A . n A 1 14 ASP 14 14 14 ASP ASP A . n A 1 15 GLY 15 15 15 GLY GLY A . n A 1 16 SER 16 16 16 SER SER A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 VAL 18 18 18 VAL VAL A . n A 1 19 HIS 19 19 19 HIS HIS A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 PHE 21 21 21 PHE PHE A . n A 1 22 LYS 22 22 22 LYS LYS A . n A 1 23 ASP 23 23 23 ASP ASP A . n A 1 24 GLY 24 24 24 GLY GLY A . n A 1 25 LYS 25 25 25 LYS LYS A . n A 1 26 MET 26 26 26 MET MET A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 MET 28 28 28 MET MET A . n A 1 29 GLU 29 29 29 GLU GLU A . n A 1 30 ASN 30 30 30 ASN ASN A . n A 1 31 LYS 31 31 31 LYS LYS A . n A 1 32 PHE 32 32 32 PHE PHE A . n A 1 33 GLY 33 33 33 GLY GLY A . n A 1 34 LYS 34 34 34 LYS LYS A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 MET 36 36 36 MET MET A . n A 1 37 ASN 37 37 37 ASN ASN A . n A 1 38 MET 38 38 38 MET MET A . n A 1 39 PRO 39 39 39 PRO PRO A . n A 1 40 GLU 40 40 40 GLU GLU A . n A 1 41 GLY 41 41 41 GLY GLY A . n A 1 42 LYS 42 42 42 LYS LYS A . n A 1 43 VAL 43 43 43 VAL VAL A . n A 1 44 MET 44 44 44 MET MET A . n A 1 45 GLU 45 45 45 GLU GLU A . n A 1 46 THR 46 46 46 THR THR A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 ASP 48 48 48 ASP ASP A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 THR 50 50 50 THR THR A . n A 1 51 LYS 51 51 51 LYS LYS A . n A 1 52 ILE 52 52 52 ILE ILE A . n A 1 53 ILE 53 53 53 ILE ILE A . n A 1 54 MET 54 54 54 MET MET A . n A 1 55 LYS 55 55 55 LYS LYS A . n A 1 56 GLY 56 56 56 GLY GLY A . n A 1 57 ASN 57 57 57 ASN ASN A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 ILE 59 59 59 ILE ILE A . n A 1 60 PHE 60 60 60 PHE PHE A . n A 1 61 ARG 61 61 61 ARG ARG A . n A 1 62 LEU 62 62 62 LEU LEU A . n A 1 63 ASP 63 63 63 ASP ASP A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 ALA 65 65 65 ALA ALA A . n A 1 66 LEU 66 66 66 LEU LEU A . n A 1 67 ARG 67 67 67 ARG ARG A . n A 1 68 LYS 68 68 68 LYS LYS A . n A 1 69 GLY 69 69 69 GLY GLY A . n A 1 70 HIS 70 70 70 HIS HIS A . n A 1 71 SER 71 71 71 SER SER A . n A 1 72 GLU 72 72 72 GLU GLU A . n A 1 73 GLY 73 73 73 GLY GLY A . n A 1 74 GLY 74 74 74 GLY GLY A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-05-27 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id CopK 1.5 mM '[U-100% 13C; U-100% 15N]' 1 H2O 55 M ? 1 MES 50 mM ? 1 CopK 1.5 mM '[U-100% 15N]' 2 H2O 55 M ? 2 MES 50 mM ? 2 CopK 1.5 mM ? 3 H2O 55 M ? 3 MES 50 mM ? 3 C12E5 5 % ? 3 hexanol 5 % ? 3 CopK 1.5 mM ? 4 D2O 55 M ? 4 MES 50 mM ? 4 CopK 0.5 mM '[U-100% 15N]' 5 H2O 55 M ? 5 MES 50 mM ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HH A TYR 10 ? ? HE A ARG 61 ? ? 1.33 2 1 OH A TYR 10 ? ? HE A ARG 61 ? ? 1.57 3 1 H A TYR 10 ? ? O A VAL 18 ? ? 1.58 4 2 HH A TYR 10 ? ? HD2 A ARG 61 ? ? 0.74 5 3 HH A TYR 10 ? ? HD2 A ARG 61 ? ? 1.26 6 3 HE2 A HIS 19 ? ? OE2 A GLU 29 ? ? 1.57 7 3 H A TYR 10 ? ? O A VAL 18 ? ? 1.58 8 3 OD1 A ASP 2 ? ? HG A SER 4 ? ? 1.59 9 4 HH A TYR 10 ? ? HD3 A ARG 61 ? ? 1.30 10 4 HG2 A MET 26 ? ? HD11 A ILE 59 ? ? 1.31 11 4 H A TYR 10 ? ? O A VAL 18 ? ? 1.56 12 4 OD2 A ASP 23 ? ? HZ3 A LYS 25 ? ? 1.58 13 5 OD1 A ASP 2 ? ? HG A SER 4 ? ? 1.54 14 6 H A TYR 10 ? ? O A VAL 18 ? ? 1.57 15 7 HE2 A HIS 19 ? ? OE1 A GLU 29 ? ? 1.58 16 8 HG2 A MET 26 ? ? HD11 A ILE 59 ? ? 1.23 17 8 H A TYR 10 ? ? O A VAL 18 ? ? 1.58 18 8 OD2 A ASP 23 ? ? HZ3 A LYS 25 ? ? 1.59 19 8 OG1 A THR 9 ? ? HD1 A HIS 19 ? ? 1.59 20 9 HB3 A ASP 11 ? ? HE A ARG 47 ? ? 1.20 21 9 HE2 A HIS 19 ? ? OE1 A GLU 29 ? ? 1.56 22 10 HA A ASN 5 ? ? HE2 A LYS 22 ? ? 1.28 23 10 HH A TYR 10 ? ? HD3 A ARG 61 ? ? 1.34 24 10 H A TYR 10 ? ? O A VAL 18 ? ? 1.55 25 11 HD12 A LEU 62 ? ? H A ALA 65 ? ? 1.25 26 11 HG1 A THR 46 ? ? OD1 A ASP 48 ? ? 1.56 27 11 H A TYR 10 ? ? O A VAL 18 ? ? 1.59 28 11 O A ILE 53 ? ? H A PHE 60 ? ? 1.60 29 12 H A TYR 10 ? ? O A VAL 18 ? ? 1.57 30 12 HE2 A HIS 19 ? ? OE1 A GLU 29 ? ? 1.59 31 13 HE2 A HIS 19 ? ? OE2 A GLU 29 ? ? 1.56 32 14 H A TYR 10 ? ? O A VAL 18 ? ? 1.58 33 15 HB2 A ASP 11 ? ? HE A ARG 47 ? ? 1.26 34 15 HE2 A HIS 19 ? ? OE2 A GLU 29 ? ? 1.57 35 15 O A ILE 53 ? ? H A PHE 60 ? ? 1.59 36 16 HH A TYR 10 ? ? HD2 A ARG 61 ? ? 1.22 37 16 HG2 A MET 26 ? ? HD12 A ILE 59 ? ? 1.34 38 16 HE2 A HIS 19 ? ? OE1 A GLU 29 ? ? 1.55 39 16 H A TYR 10 ? ? O A VAL 18 ? ? 1.59 40 16 HG1 A THR 46 ? ? OD1 A ASP 48 ? ? 1.60 41 17 HE2 A HIS 19 ? ? OE1 A GLU 29 ? ? 1.59 42 17 H A TYR 10 ? ? O A VAL 18 ? ? 1.59 43 18 H A TYR 10 ? ? O A VAL 18 ? ? 1.56 44 19 H A TYR 10 ? ? O A VAL 18 ? ? 1.59 45 20 HE2 A HIS 19 ? ? OE2 A GLU 29 ? ? 1.57 46 20 H A TYR 10 ? ? O A VAL 18 ? ? 1.58 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CE1 A TYR 10 ? ? CZ A TYR 10 ? ? 1.301 1.381 -0.080 0.013 N 2 2 CZ A TYR 10 ? ? CE2 A TYR 10 ? ? 1.467 1.381 0.086 0.013 N 3 3 CE1 A TYR 10 ? ? CZ A TYR 10 ? ? 1.287 1.381 -0.094 0.013 N 4 3 CZ A TYR 10 ? ? CE2 A TYR 10 ? ? 1.484 1.381 0.103 0.013 N 5 4 CE1 A TYR 10 ? ? CZ A TYR 10 ? ? 1.284 1.381 -0.097 0.013 N 6 4 CZ A TYR 10 ? ? CE2 A TYR 10 ? ? 1.480 1.381 0.099 0.013 N 7 6 CZ A PHE 60 ? ? CE2 A PHE 60 ? ? 1.488 1.369 0.119 0.019 N 8 8 CE1 A TYR 10 ? ? CZ A TYR 10 ? ? 1.292 1.381 -0.089 0.013 N 9 8 CZ A TYR 10 ? ? CE2 A TYR 10 ? ? 1.478 1.381 0.097 0.013 N 10 9 CE1 A TYR 10 ? ? CZ A TYR 10 ? ? 1.257 1.381 -0.124 0.013 N 11 9 CZ A TYR 10 ? ? CE2 A TYR 10 ? ? 1.521 1.381 0.140 0.013 N 12 10 CE1 A TYR 10 ? ? CZ A TYR 10 ? ? 1.285 1.381 -0.096 0.013 N 13 10 CZ A TYR 10 ? ? CE2 A TYR 10 ? ? 1.476 1.381 0.095 0.013 N 14 12 CE1 A PHE 21 ? ? CZ A PHE 21 ? ? 1.487 1.369 0.118 0.019 N 15 15 CE1 A TYR 10 ? ? CZ A TYR 10 ? ? 1.295 1.381 -0.086 0.013 N 16 15 CZ A TYR 10 ? ? CE2 A TYR 10 ? ? 1.470 1.381 0.089 0.013 N 17 15 CZ A PHE 60 ? ? CE2 A PHE 60 ? ? 1.511 1.369 0.142 0.019 N 18 16 CE1 A TYR 10 ? ? CZ A TYR 10 ? ? 1.302 1.381 -0.079 0.013 N 19 16 CZ A TYR 10 ? ? CE2 A TYR 10 ? ? 1.461 1.381 0.080 0.013 N 20 19 CE1 A PHE 60 ? ? CZ A PHE 60 ? ? 1.523 1.369 0.154 0.019 N 21 19 CZ A PHE 60 ? ? CE2 A PHE 60 ? ? 1.236 1.369 -0.133 0.019 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 2 ? ? 67.27 108.56 2 1 LYS A 31 ? ? -52.84 5.75 3 1 LEU A 62 ? ? 36.97 15.11 4 1 ASP A 63 ? ? 63.66 -51.45 5 1 GLU A 72 ? ? 64.20 88.21 6 2 LYS A 31 ? ? -50.54 2.76 7 2 LEU A 62 ? ? 53.03 -13.16 8 2 ASP A 63 ? ? 67.06 148.15 9 2 GLU A 64 ? ? 78.90 -45.83 10 2 ARG A 67 ? ? -102.30 -166.46 11 3 LYS A 31 ? ? -49.63 -19.54 12 3 ASN A 57 ? ? 72.59 -1.74 13 3 LEU A 62 ? ? 37.81 14.21 14 3 ASP A 63 ? ? 36.31 76.56 15 3 GLU A 64 ? ? 177.77 -41.19 16 4 LYS A 31 ? ? -56.92 5.66 17 4 LEU A 62 ? ? 62.23 -35.22 18 4 ASP A 63 ? ? 83.75 -39.66 19 4 HIS A 70 ? ? -171.43 -46.32 20 4 SER A 71 ? ? -102.57 77.57 21 5 GLN A 13 ? ? 86.88 -31.26 22 5 LEU A 62 ? ? 57.82 -47.99 23 5 ASP A 63 ? ? 80.78 -26.71 24 5 GLU A 72 ? ? -133.82 -60.93 25 6 LYS A 31 ? ? -51.63 -2.86 26 6 LEU A 62 ? ? 59.64 -35.53 27 6 ASP A 63 ? ? 79.33 -48.33 28 6 LYS A 68 ? ? -152.85 5.03 29 6 SER A 71 ? ? -164.83 102.93 30 7 ASP A 2 ? ? 65.09 121.15 31 7 GLN A 13 ? ? 94.03 -22.65 32 7 LEU A 62 ? ? 57.67 -17.92 33 7 ASP A 63 ? ? 76.07 -25.38 34 7 ARG A 67 ? ? -101.94 -165.01 35 8 ASN A 57 ? ? 72.37 -9.35 36 8 LEU A 62 ? ? 58.91 -46.76 37 8 ASP A 63 ? ? 77.09 -46.67 38 8 LYS A 68 ? ? -100.05 65.26 39 9 LYS A 31 ? ? -53.31 1.91 40 9 ASN A 57 ? ? 71.85 -9.63 41 9 LEU A 62 ? ? 38.44 5.90 42 9 ASP A 63 ? ? 54.17 168.60 43 9 GLU A 64 ? ? 76.05 -40.60 44 9 HIS A 70 ? ? -87.21 -75.80 45 10 GLN A 13 ? ? 88.72 -36.58 46 10 LEU A 62 ? ? 62.54 -34.28 47 10 ASP A 63 ? ? 81.83 -43.88 48 10 SER A 71 ? ? -164.78 -57.11 49 11 LYS A 31 ? ? -58.02 1.70 50 11 LEU A 62 ? ? 60.40 -25.44 51 11 ASP A 63 ? ? 71.18 60.33 52 11 GLU A 64 ? ? 168.16 -40.92 53 11 LYS A 68 ? ? -107.92 74.18 54 12 LEU A 62 ? ? 55.72 -37.49 55 12 ASP A 63 ? ? 79.89 -58.73 56 12 HIS A 70 ? ? -120.00 -83.39 57 12 SER A 71 ? ? 56.97 -152.20 58 12 GLU A 72 ? ? -153.40 -73.99 59 13 ASP A 2 ? ? 67.08 105.42 60 13 GLN A 13 ? ? 86.87 -24.37 61 13 LYS A 31 ? ? -59.24 5.08 62 13 GLU A 40 ? ? -83.75 -90.59 63 13 ASN A 57 ? ? 72.55 -10.66 64 13 LEU A 62 ? ? 59.89 -37.05 65 13 ASP A 63 ? ? 81.54 -34.22 66 13 LYS A 68 ? ? -105.28 78.99 67 14 GLU A 58 ? ? -128.06 -169.51 68 14 LEU A 62 ? ? 62.41 -60.04 69 14 ASP A 63 ? ? 139.23 -35.65 70 15 SER A 4 ? ? 73.53 -27.62 71 15 GLN A 13 ? ? 83.68 -32.61 72 15 LYS A 31 ? ? -59.18 5.28 73 15 LEU A 62 ? ? 74.77 -48.82 74 15 ASP A 63 ? ? 71.29 -56.70 75 15 GLU A 72 ? ? -82.15 -72.26 76 16 LYS A 31 ? ? -50.90 4.80 77 16 LEU A 62 ? ? 77.58 -42.01 78 16 ASP A 63 ? ? 71.27 -25.75 79 17 ASP A 2 ? ? 69.30 142.19 80 17 GLN A 13 ? ? 90.84 -34.05 81 17 ASN A 57 ? ? 73.99 -35.24 82 17 LEU A 62 ? ? 75.22 -38.38 83 17 ASP A 63 ? ? 76.28 -57.47 84 17 HIS A 70 ? ? 71.80 -63.66 85 18 GLN A 13 ? ? 82.36 -26.99 86 18 LEU A 62 ? ? 41.22 4.87 87 18 ASP A 63 ? ? 55.67 149.14 88 18 GLU A 64 ? ? 82.66 -22.64 89 18 HIS A 70 ? ? -160.12 38.54 90 19 LYS A 31 ? ? -55.92 5.23 91 19 ASN A 57 ? ? 70.69 -13.27 92 19 LEU A 62 ? ? 75.80 -52.12 93 19 ASP A 63 ? ? 72.85 -48.32 94 19 ARG A 67 ? ? 41.41 82.05 95 19 SER A 71 ? ? 72.97 161.77 96 20 ASP A 2 ? ? 58.72 103.57 97 20 LYS A 34 ? ? -43.91 -74.62 98 20 SER A 35 ? ? 89.09 68.18 99 20 ASN A 57 ? ? 150.39 -24.27 100 20 LEU A 62 ? ? 58.16 -16.41 101 20 ASP A 63 ? ? 174.90 -170.47 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 2 TYR A 10 ? ? 0.057 'SIDE CHAIN' 2 3 PHE A 60 ? ? 0.065 'SIDE CHAIN' 3 4 PHE A 60 ? ? 0.108 'SIDE CHAIN' 4 7 PHE A 60 ? ? 0.085 'SIDE CHAIN' 5 9 TYR A 10 ? ? 0.064 'SIDE CHAIN' 6 10 PHE A 60 ? ? 0.083 'SIDE CHAIN' 7 12 PHE A 60 ? ? 0.064 'SIDE CHAIN' 8 14 PHE A 60 ? ? 0.077 'SIDE CHAIN' #