HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 05-MAR-08 2K1H TITLE SOLUTION NMR STRUCTURE OF SER13 FROM STAPHYLOCOCCUS EPIDERMIDIS. TITLE 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET SER13 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN SER13; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: STAPHYLOCOCCUS EPIDERMIDIS; SOURCE 3 ORGANISM_TAXID: 176280; SOURCE 4 STRAIN: ATCC 12228; SOURCE 5 ATCC: 12228; SOURCE 6 GENE: SE_1124; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI BL21(DE3); SOURCE 8 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 11 EXPRESSION_SYSTEM_PLASMID: PET21 KEYWDS STRUCTURAL GENOMICS, UNKNOWN FUNCTION, PSI-2, PROTEIN STRUCTURE KEYWDS 2 INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR H.LEE,G.WYLIE,S.BANSAL,X.WANG,R.SHASTRY,M.JIANG,K.CUNNINGHAM,L.MA, AUTHOR 2 R.XIAO,J.LIU,M.C.BARAN,G.SWAPNA,T.B.ACTON,B.ROST,G.T.MONTELIONE, AUTHOR 3 J.H.PRESTEGARD,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 6 14-JUN-23 2K1H 1 REMARK REVDAT 5 20-OCT-21 2K1H 1 SEQADV REVDAT 4 19-FEB-20 2K1H 1 REMARK SEQADV REVDAT 3 13-JUL-11 2K1H 1 VERSN REVDAT 2 24-FEB-09 2K1H 1 VERSN REVDAT 1 18-MAR-08 2K1H 0 JRNL AUTH H.LEE,G.WYLIE,S.BANSAL,G.T.MONTELIONE,J.H.PRESTEGARD JRNL TITL SOLUTION STRUCTURE OF SER13. JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 2.1, X-PLOR NIH 2.18 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 SCHWIETERS, KUSZEWSKI, TJANDRA AND CLORE (X-PLOR REMARK 3 NIH) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K1H COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-MAR-08. REMARK 100 THE DEPOSITION ID IS D_1000100556. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 100 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.07 MM [U-100% 13C; U-100% 15N] REMARK 210 SER13, 0.2 % SODIUM AZIDE, 100 REMARK 210 MM DTT, 5 MM CACL2, 100 MM REMARK 210 SODIUM CHLORIDE, 20 MM MES, 95% REMARK 210 H2O/5% D2O; 0.86 MM [U-100% 13C; REMARK 210 U-100% 15N] SER13, 0.2 % SODIUM REMARK 210 AZIDE, 100 MM DTT, 5 MM CACL2, REMARK 210 100 MM SODIUM CHLORIDE, 20 MM REMARK 210 MES, 7 % NEGATIVE CHARGED POLY REMARK 210 ACRYLAMIDE COMPRESSED GEL, 95% REMARK 210 H2O/5% D2O; 0.60 MM [U-100% 13C; REMARK 210 U-100% 15N] SER13, 0.2 % SODIUM REMARK 210 AZIDE, 100 MM DTT, 5 MM CACL2, REMARK 210 100 MM SODIUM CHLORIDE, 20 MM REMARK 210 MES, 7.5 % DMPS/DHPC MIXTURE, 95% REMARK 210 H2O/5% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D C(CO)NH; 3D REMARK 210 HNCO; 3D HNCACB; 3D H(CCO)NH; 3D REMARK 210 HCCH-TOCSY; 3D 1H-15N NOESY; 3D REMARK 210 1H-15N TOCSY; 3D 1H-13C NOESY; REMARK 210 2D 1H-15N HSQC-TROSY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : SPARKY, NMRPIPE REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 50 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LEAST REMARK 210 RESTRAINT VIOLATIONS REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-10 REMARK 465 RES C SSSEQI REMARK 465 LEU A 87 REMARK 465 GLU A 88 REMARK 465 HIS A 89 REMARK 465 HIS A 90 REMARK 465 HIS A 91 REMARK 465 HIS A 92 REMARK 465 HIS A 93 REMARK 465 HIS A 94 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 10 31.17 -65.41 REMARK 500 1 THR A 32 116.61 -171.32 REMARK 500 1 ALA A 33 130.94 170.62 REMARK 500 1 LEU A 58 -150.05 62.35 REMARK 500 1 GLU A 66 172.48 -58.98 REMARK 500 2 PRO A 10 29.49 -65.62 REMARK 500 2 ASN A 26 45.72 -71.99 REMARK 500 2 THR A 32 113.01 -171.16 REMARK 500 2 ALA A 33 133.96 167.15 REMARK 500 2 PRO A 39 117.69 -38.90 REMARK 500 2 LEU A 58 -156.27 56.26 REMARK 500 2 SER A 85 40.29 -85.55 REMARK 500 3 PRO A 10 14.34 -67.37 REMARK 500 3 ARG A 23 -156.22 -151.76 REMARK 500 3 GLN A 24 -72.73 -46.86 REMARK 500 3 ASP A 25 57.60 -142.80 REMARK 500 3 ASN A 26 -72.48 52.71 REMARK 500 3 SER A 27 109.84 67.03 REMARK 500 3 THR A 29 108.46 -165.40 REMARK 500 3 THR A 32 116.34 -168.16 REMARK 500 3 ALA A 33 133.68 171.30 REMARK 500 3 LEU A 58 -148.85 59.20 REMARK 500 4 ILE A 3 155.67 -48.05 REMARK 500 4 ILE A 4 -46.06 -130.93 REMARK 500 4 PRO A 10 12.53 -64.99 REMARK 500 4 PRO A 22 -72.86 -60.90 REMARK 500 4 ARG A 23 105.66 47.46 REMARK 500 4 GLN A 24 -2.32 -57.52 REMARK 500 4 SER A 27 123.88 55.10 REMARK 500 4 THR A 32 114.94 -172.11 REMARK 500 4 ALA A 33 135.85 169.78 REMARK 500 4 PHE A 41 -1.70 -57.80 REMARK 500 4 LEU A 58 -163.18 54.75 REMARK 500 5 ILE A 3 156.16 -47.26 REMARK 500 5 PRO A 10 23.09 -64.86 REMARK 500 5 HIS A 12 -71.14 -110.71 REMARK 500 5 ASP A 25 59.26 -142.00 REMARK 500 5 ASN A 26 -86.38 -59.71 REMARK 500 5 SER A 27 -163.06 45.09 REMARK 500 5 THR A 29 107.24 -165.25 REMARK 500 5 THR A 32 113.15 -167.59 REMARK 500 5 ALA A 33 126.92 167.72 REMARK 500 5 LEU A 58 -149.58 64.05 REMARK 500 5 SER A 85 34.46 -76.67 REMARK 500 6 PRO A 10 21.36 -64.86 REMARK 500 6 ARG A 23 91.93 -67.48 REMARK 500 6 ASN A 26 80.81 38.06 REMARK 500 6 THR A 29 107.01 -166.95 REMARK 500 6 THR A 32 113.89 -168.97 REMARK 500 6 ALA A 33 132.68 167.93 REMARK 500 REMARK 500 THIS ENTRY HAS 81 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: SER13 RELATED DB: TARGETDB REMARK 900 RELATED ID: 15678 RELATED DB: BMRB DBREF 2K1H A 1 86 UNP Q8CSK1 Q8CSK1_STAES 1 86 SEQADV 2K1H PHE A 28 UNP Q8CSK1 SER 28 ENGINEERED MUTATION SEQADV 2K1H LEU A 87 UNP Q8CSK1 EXPRESSION TAG SEQADV 2K1H GLU A 88 UNP Q8CSK1 EXPRESSION TAG SEQADV 2K1H HIS A 89 UNP Q8CSK1 EXPRESSION TAG SEQADV 2K1H HIS A 90 UNP Q8CSK1 EXPRESSION TAG SEQADV 2K1H HIS A 91 UNP Q8CSK1 EXPRESSION TAG SEQADV 2K1H HIS A 92 UNP Q8CSK1 EXPRESSION TAG SEQADV 2K1H HIS A 93 UNP Q8CSK1 EXPRESSION TAG SEQADV 2K1H HIS A 94 UNP Q8CSK1 EXPRESSION TAG SEQRES 1 A 94 MET GLU ILE ILE ALA ILE SER GLU THR PRO ASN HIS ASN SEQRES 2 A 94 THR MET LYS VAL SER LEU SER GLU PRO ARG GLN ASP ASN SEQRES 3 A 94 SER PHE THR THR TYR THR ALA ALA GLN GLU GLY GLN PRO SEQRES 4 A 94 GLU PHE ILE ASN ARG LEU PHE GLU ILE GLU GLY VAL LYS SEQRES 5 A 94 SER ILE PHE TYR VAL LEU ASP PHE ILE SER ILE ASP LYS SEQRES 6 A 94 GLU ASP ASN ALA ASN TRP ASN GLU LEU LEU PRO GLN ILE SEQRES 7 A 94 GLU ASN THR PHE ALA LYS SER ASN LEU GLU HIS HIS HIS SEQRES 8 A 94 HIS HIS HIS HELIX 1 1 PRO A 39 GLU A 47 1 9 HELIX 2 2 ASN A 70 ASN A 86 1 17 SHEET 1 A 4 MET A 15 SER A 18 0 SHEET 2 A 4 PHE A 60 LYS A 65 -1 O ILE A 61 N VAL A 17 SHEET 3 A 4 VAL A 51 VAL A 57 -1 N PHE A 55 O SER A 62 SHEET 4 A 4 THR A 30 TYR A 31 -1 N TYR A 31 O ILE A 54 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1