HEADER RNA BINDING PROTEIN 13-JUN-08 2K4K TITLE SOLUTION STRUCTURE OF GSP13 FROM BACILLUS SUBTILIS COMPND MOL_ID: 1; COMPND 2 MOLECULE: GENERAL STRESS PROTEIN 13; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: GSP13; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACILLUS SUBTILIS; SOURCE 3 ORGANISM_TAXID: 1423; SOURCE 4 GENE: YUGI, BSU31390; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 7 EXPRESSION_SYSTEM_VECTOR: PET-21A KEYWDS S1, CYTOPLASM, STRESS RESPONSE, RNA BINDING PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR W.YU,B.YU,J.HU,C.JIN,B.XIA REVDAT 2 16-MAR-22 2K4K 1 REMARK REVDAT 1 12-MAY-09 2K4K 0 JRNL AUTH W.YU,J.HU,B.YU,W.XIA,C.JIN,B.XIA JRNL TITL SOLUTION STRUCTURE OF GSP13 FROM BACILLUS SUBTILIS EXHIBITS JRNL TITL 2 AN S1 DOMAIN RELATED TO COLD SHOCK PROTEINS. JRNL REF J.BIOMOL.NMR V. 43 255 2009 JRNL REFN ISSN 0925-2738 JRNL PMID 19152054 JRNL DOI 10.1007/S10858-009-9298-Y REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : NMRPIPE REMARK 3 AUTHORS : DELAGLIO, GRZESIEK, VUISTER, ZHU, PFEIFER AND BAX REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K4K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-JUN-08. REMARK 100 THE DEPOSITION ID IS D_1000100667. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 7.0 REMARK 210 IONIC STRENGTH : 0.07 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 GSP13, 20 MM POTASSIUM PHOSPHATE, REMARK 210 20 MM SODIUM CHLORIDE, 1 MM REMARK 210 EDTA, 90% H2O/10% D2O; 1 MM [U- REMARK 210 100% 15N] GSP13, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 3D CBCA(CO)NH; REMARK 210 3D HNCO; 3D HNCACB; 3D HBHA(CO) REMARK 210 NH; 3D HCCH-TOCSY; 3D HCCH-COSY; REMARK 210 3D 1H-13C NOESY; 2D 1H-13C HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRVIEW, NMRDRAW REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 LYS A 4 27.07 -150.75 REMARK 500 1 THR A 110 27.15 -141.91 REMARK 500 1 ASP A 113 -43.97 -140.52 REMARK 500 1 TRP A 118 176.15 64.10 REMARK 500 1 ILE A 119 -31.05 -146.30 REMARK 500 2 LYS A 4 17.08 53.47 REMARK 500 2 ALA A 96 31.49 -144.04 REMARK 500 2 GLN A 106 19.12 53.43 REMARK 500 2 PHE A 108 -47.30 -154.99 REMARK 500 2 LEU A 115 -40.72 -134.97 REMARK 500 2 GLU A 120 -160.48 -77.87 REMARK 500 2 ASP A 126 -45.12 -139.92 REMARK 500 3 GLU A 30 17.74 -144.36 REMARK 500 3 GLU A 101 30.38 -142.40 REMARK 500 3 LEU A 115 -9.69 -143.33 REMARK 500 3 ILE A 119 0.62 -67.97 REMARK 500 4 PRO A 83 21.65 -69.16 REMARK 500 4 LYS A 94 90.53 -69.92 REMARK 500 4 PHE A 108 -56.64 63.60 REMARK 500 4 ASP A 113 -15.21 58.63 REMARK 500 4 SER A 122 -178.06 65.49 REMARK 500 5 HIS A 42 41.67 -75.50 REMARK 500 5 ARG A 91 -29.43 -158.48 REMARK 500 5 GLN A 97 -131.06 -137.76 REMARK 500 5 SER A 103 20.01 -72.33 REMARK 500 5 GLU A 116 -32.79 -130.92 REMARK 500 5 TRP A 118 58.76 39.09 REMARK 500 5 ILE A 119 27.79 -74.94 REMARK 500 5 ASP A 126 34.07 -84.12 REMARK 500 6 SER A 88 -24.76 -142.32 REMARK 500 7 VAL A 45 69.86 -152.77 REMARK 500 7 LEU A 52 -169.62 54.64 REMARK 500 7 LYS A 85 74.21 -68.60 REMARK 500 7 SER A 99 29.28 -76.91 REMARK 500 7 SER A 103 32.69 -78.00 REMARK 500 8 ALA A 20 2.01 -64.95 REMARK 500 8 ASP A 28 21.03 -144.80 REMARK 500 8 GLU A 29 -11.48 62.62 REMARK 500 8 HIS A 42 37.18 -76.35 REMARK 500 8 VAL A 45 54.39 -152.52 REMARK 500 8 ALA A 96 40.83 -71.69 REMARK 500 8 VAL A 98 -162.76 -124.86 REMARK 500 8 THR A 110 -81.91 59.31 REMARK 500 8 SER A 122 -36.25 -140.47 REMARK 500 9 ASP A 66 57.75 -141.61 REMARK 500 9 SER A 88 8.33 -67.89 REMARK 500 9 VAL A 98 -19.48 -140.68 REMARK 500 9 GLU A 116 -36.50 -38.71 REMARK 500 9 GLU A 120 49.44 -140.38 REMARK 500 9 MET A 121 -139.58 50.22 REMARK 500 REMARK 500 THIS ENTRY HAS 108 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2K4K A 1 130 UNP P80870 GS13_BACSU 1 130 SEQRES 1 A 130 MET ALA ALA LYS PHE GLU VAL GLY SER VAL TYR THR GLY SEQRES 2 A 130 LYS VAL THR GLY LEU GLN ALA TYR GLY ALA PHE VAL ALA SEQRES 3 A 130 LEU ASP GLU GLU THR GLN GLY LEU VAL HIS ILE SER GLU SEQRES 4 A 130 VAL THR HIS GLY PHE VAL LYS ASP ILE ASN GLU HIS LEU SEQRES 5 A 130 SER VAL GLY ASP GLU VAL GLN VAL LYS VAL LEU ALA VAL SEQRES 6 A 130 ASP GLU GLU LYS GLY LYS ILE SER LEU SER ILE ARG ALA SEQRES 7 A 130 THR GLN ALA ALA PRO GLU LYS LYS GLU SER LYS PRO ARG SEQRES 8 A 130 LYS PRO LYS ALA ALA GLN VAL SER GLU GLU ALA SER THR SEQRES 9 A 130 PRO GLN GLY PHE ASN THR LEU LYS ASP LYS LEU GLU GLU SEQRES 10 A 130 TRP ILE GLU MET SER ASN ARG LYS ASP LEU ILE LYS LYS HELIX 1 1 SER A 38 VAL A 40 5 3 HELIX 2 2 ASP A 47 HIS A 51 5 5 HELIX 3 3 ILE A 76 ALA A 82 1 7 HELIX 4 4 LYS A 125 LYS A 129 5 5 SHEET 1 A 6 VAL A 10 GLN A 19 0 SHEET 2 A 6 GLY A 22 ASP A 28 -1 O ALA A 26 N LYS A 14 SHEET 3 A 6 THR A 31 HIS A 36 -1 O GLY A 33 N VAL A 25 SHEET 4 A 6 LYS A 71 SER A 75 1 O ILE A 72 N LEU A 34 SHEET 5 A 6 GLU A 57 ASP A 66 -1 N LEU A 63 O SER A 73 SHEET 6 A 6 VAL A 10 GLN A 19 -1 N TYR A 11 O VAL A 60 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1