data_2K53 # _entry.id 2K53 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2K53 pdb_00002k53 10.2210/pdb2k53/pdb RCSB RCSB100686 ? ? WWPDB D_1000100686 ? ? # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified CmR9 TargetDB . unspecified 15822 BMRB . # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2K53 _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-06-24 _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Swapna, G.V.T.' 1 'Huang, W.' 2 'Jiang, M.' 3 'Foote, E.L.' 4 'Xiao, R.' 5 'Nair, R.' 6 'Everett, J.' 7 'Acton, T.B.' 8 'Rost, B.' 9 'Montelione, G.T.' 10 'Northeast Structural Genomics Consortium (NESG)' 11 # _citation.id primary _citation.title 'NMR Solution Structure of A3DK08 protein from Clostridium thermocellum: Northeast Structural Genomics Consortium Target CmR9' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Swapna, G.V.T.' 1 ? primary 'Huang, W.' 2 ? primary 'Jiang, M.' 3 ? primary 'Foote, E.L.' 4 ? primary 'Xiao, R.' 5 ? primary 'Nair, R.' 6 ? primary 'Everett, J.' 7 ? primary 'Acton, T.B.' 8 ? primary 'Rost, B.' 9 ? primary 'Montelione, G.T.' 10 ? # _cell.entry_id 2K53 _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2K53 _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # _entity.id 1 _entity.type polymer _entity.src_method man _entity.pdbx_description 'A3DK08 Protein' _entity.formula_weight 8595.886 _entity.pdbx_number_of_molecules 1 _entity.pdbx_ec ? _entity.pdbx_mutation ? _entity.pdbx_fragment ? _entity.details ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code MKITKDMIIADVLQMDRGTAPIFINNGMHCLGCPSSMGESIEDACAVHGIDADKLVKELNEYFEKKEVLEHHHHHH _entity_poly.pdbx_seq_one_letter_code_can MKITKDMIIADVLQMDRGTAPIFINNGMHCLGCPSSMGESIEDACAVHGIDADKLVKELNEYFEKKEVLEHHHHHH _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier CmR9 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LYS n 1 3 ILE n 1 4 THR n 1 5 LYS n 1 6 ASP n 1 7 MET n 1 8 ILE n 1 9 ILE n 1 10 ALA n 1 11 ASP n 1 12 VAL n 1 13 LEU n 1 14 GLN n 1 15 MET n 1 16 ASP n 1 17 ARG n 1 18 GLY n 1 19 THR n 1 20 ALA n 1 21 PRO n 1 22 ILE n 1 23 PHE n 1 24 ILE n 1 25 ASN n 1 26 ASN n 1 27 GLY n 1 28 MET n 1 29 HIS n 1 30 CYS n 1 31 LEU n 1 32 GLY n 1 33 CYS n 1 34 PRO n 1 35 SER n 1 36 SER n 1 37 MET n 1 38 GLY n 1 39 GLU n 1 40 SER n 1 41 ILE n 1 42 GLU n 1 43 ASP n 1 44 ALA n 1 45 CYS n 1 46 ALA n 1 47 VAL n 1 48 HIS n 1 49 GLY n 1 50 ILE n 1 51 ASP n 1 52 ALA n 1 53 ASP n 1 54 LYS n 1 55 LEU n 1 56 VAL n 1 57 LYS n 1 58 GLU n 1 59 LEU n 1 60 ASN n 1 61 GLU n 1 62 TYR n 1 63 PHE n 1 64 GLU n 1 65 LYS n 1 66 LYS n 1 67 GLU n 1 68 VAL n 1 69 LEU n 1 70 GLU n 1 71 HIS n 1 72 HIS n 1 73 HIS n 1 74 HIS n 1 75 HIS n 1 76 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus Clostridium _entity_src_gen.pdbx_gene_src_gene Cthe_3092 _entity_src_gen.gene_src_species thermocellum _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Clostridium thermocellum ATCC 27405' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 203119 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id ? _entity_src_gen.host_org_genus Escherichia _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species coli _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)+magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET 21-23C' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code A3DK08_CLOTH _struct_ref.pdbx_db_accession A3DK08 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code MKITKDMIIADVLQMDRGTAPIFINNGMHCLGCPSSMGESIEDACAVHGIDADKLVKELNEYFEKKEV _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2K53 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 68 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession A3DK08 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 68 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 68 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2K53 LEU A 69 ? UNP A3DK08 ? ? 'expression tag' 69 1 1 2K53 GLU A 70 ? UNP A3DK08 ? ? 'expression tag' 70 2 1 2K53 HIS A 71 ? UNP A3DK08 ? ? 'expression tag' 71 3 1 2K53 HIS A 72 ? UNP A3DK08 ? ? 'expression tag' 72 4 1 2K53 HIS A 73 ? UNP A3DK08 ? ? 'expression tag' 73 5 1 2K53 HIS A 74 ? UNP A3DK08 ? ? 'expression tag' 74 6 1 2K53 HIS A 75 ? UNP A3DK08 ? ? 'expression tag' 75 7 1 2K53 HIS A 76 ? UNP A3DK08 ? ? 'expression tag' 76 8 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '2D 1H-15N HSQC' 1 3 1 '2D 1H-13C HSQC' 2 4 2 '2D 1H-13C HSQC' 1 5 1 '3D CBCA(CO)NH' 1 6 1 '3D HNCACB' 1 7 1 '3D HNCO' 1 8 1 '3D HBHA(CO)NH' 1 9 1 '3D HCCH-TOCSY' 1 10 1 '3D 1H-13C NOESY' 1 11 1 '3D 1H-15N NOESY' 1 12 1 '3D 1H-13C NOESY' # loop_ _pdbx_nmr_exptl_sample_conditions.conditions_id _pdbx_nmr_exptl_sample_conditions.ionic_strength _pdbx_nmr_exptl_sample_conditions.pH _pdbx_nmr_exptl_sample_conditions.pressure _pdbx_nmr_exptl_sample_conditions.pressure_units _pdbx_nmr_exptl_sample_conditions.temperature _pdbx_nmr_exptl_sample_conditions.temperature_units 1 '5mM CaCl2, 100mM NaCl' 6.5 1 atm 293 K 2 '5mM CaCl2, 100mM NaCl' 6.5 1 atm 293 K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '0.91 mM [U-100% 13C; U-100% 15N] A3DK08 Protein, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '1.05 mM [U-10% 13C; U-99% 15N] A3DK08 Protein, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Varian INOVA 1 'Varian INOVA' 800 Bruker AVANCE 2 'Bruker Avance' # _pdbx_nmr_refine.entry_id 2K53 _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details ;The structure was determined using triple resonance NMR spectroscopy. Automated backbone resonance assignments were made using AUTOASSIGN and the sidechain assignments were completed manually. Automated NOESY assignments were made using AUTOSTRUCTURE and CYANA-2.1. Dihedral angle constraints were obtained from TALOS. The structure calculations were done excluding the six HIS from the 8-residue C-terminal tag(LEHHHHHH). Completeness of assignments excluding the HHHHHH: Backbone:100% Sidechain(aliphatic): 99% Sidechain (Aromatic): 90% Stereospecific Methyl assignments:100%. The assignments were validated using AVS software. Final structure quality factors(excluding the HHHHHH) determined using PSVS-v1.3: Ordered residues are defined as residues 2-28,33-34,37-69.(a) RMSD (ordered residues)all backbone atoms:0.4A, all heavy atoms: 0.7A; RMSD (all residues) backbone: 0.7A and heavy atoms: 1.0A. (b) Ramachandran statistics for ordered residues : Most favoured regions: 97.1%, additionally allowed regions: 2.9%.(C) PROCHECK SCORES FOR ORDERED RESIDUES (RAW/Z-): PHI-PSI,0.21/1.14, ALL,0.24/1.42 (D) MOLPROBITY CLASH SCORE (RAW/Z-): 17.26/-1.44. (E) RPF scores for the goodness of the fit to NOESY data: Recall:0.984, PRECISION: 0.848, F-measure: 0.911 and final DP-score:0.743. (f) Number of close contacts for 20 models: 6. RMS deviation for bond angles:0.6deg. RMS deviation for bond lengths 0.008A. ; _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 100 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2K53 _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation 0.2 _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method 'PSVS software' # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2K53 _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Brunger, Adams, Clore, Gros, Nilges and Read' refinement CNS 2.0.6 1 'Guntert, Mumenthaler and Wuthrich' 'structure solution' CYANA 2.1 2 'Zimmerman, Moseley, Kulikowski and Montelione' 'chemical shift assignment' AutoAssign 2.4.0 3 'Huang, Tejero, Powers and Montelione' 'noesy assignments' AutoStructure 2.2.1 4 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2K53 _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2K53 _struct.title 'NMR solution structure of A3DK08 protein from Clostridium thermocellum: Northeast Structural Genomics Consortium Target CmR9' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2K53 _struct_keywords.pdbx_keywords 'structural genomics, unknown function' _struct_keywords.text ;NESG, CmR9, Clostridium thermocellum, A3DK08 protein, Structural Genomics, PSI-2, Protein Structure Initiative, Northeast Structural Genomics Consortium, unknown function ; # _struct_asym.id A _struct_asym.pdbx_blank_PDB_chainid_flag N _struct_asym.pdbx_modified N _struct_asym.entity_id 1 _struct_asym.details ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ILE A 8 ? ASP A 16 ? ILE A 8 ASP A 16 1 ? 9 HELX_P HELX_P2 2 THR A 19 ? ASN A 26 ? THR A 19 ASN A 26 1 ? 8 HELX_P HELX_P3 3 SER A 40 ? GLY A 49 ? SER A 40 GLY A 49 1 ? 10 HELX_P HELX_P4 4 ASP A 51 ? GLU A 70 ? ASP A 51 GLU A 70 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _atom_sites.entry_id 2K53 _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 1 1 MET MET A . n A 1 2 LYS 2 2 2 LYS LYS A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 LYS 5 5 5 LYS LYS A . n A 1 6 ASP 6 6 6 ASP ASP A . n A 1 7 MET 7 7 7 MET MET A . n A 1 8 ILE 8 8 8 ILE ILE A . n A 1 9 ILE 9 9 9 ILE ILE A . n A 1 10 ALA 10 10 10 ALA ALA A . n A 1 11 ASP 11 11 11 ASP ASP A . n A 1 12 VAL 12 12 12 VAL VAL A . n A 1 13 LEU 13 13 13 LEU LEU A . n A 1 14 GLN 14 14 14 GLN GLN A . n A 1 15 MET 15 15 15 MET MET A . n A 1 16 ASP 16 16 16 ASP ASP A . n A 1 17 ARG 17 17 17 ARG ARG A . n A 1 18 GLY 18 18 18 GLY GLY A . n A 1 19 THR 19 19 19 THR THR A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 PRO 21 21 21 PRO PRO A . n A 1 22 ILE 22 22 22 ILE ILE A . n A 1 23 PHE 23 23 23 PHE PHE A . n A 1 24 ILE 24 24 24 ILE ILE A . n A 1 25 ASN 25 25 25 ASN ASN A . n A 1 26 ASN 26 26 26 ASN ASN A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 MET 28 28 28 MET MET A . n A 1 29 HIS 29 29 29 HIS HIS A . n A 1 30 CYS 30 30 30 CYS CYS A . n A 1 31 LEU 31 31 31 LEU LEU A . n A 1 32 GLY 32 32 32 GLY GLY A . n A 1 33 CYS 33 33 33 CYS CYS A . n A 1 34 PRO 34 34 34 PRO PRO A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 SER 36 36 36 SER SER A . n A 1 37 MET 37 37 37 MET MET A . n A 1 38 GLY 38 38 38 GLY GLY A . n A 1 39 GLU 39 39 39 GLU GLU A . n A 1 40 SER 40 40 40 SER SER A . n A 1 41 ILE 41 41 41 ILE ILE A . n A 1 42 GLU 42 42 42 GLU GLU A . n A 1 43 ASP 43 43 43 ASP ASP A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 CYS 45 45 45 CYS CYS A . n A 1 46 ALA 46 46 46 ALA ALA A . n A 1 47 VAL 47 47 47 VAL VAL A . n A 1 48 HIS 48 48 48 HIS HIS A . n A 1 49 GLY 49 49 49 GLY GLY A . n A 1 50 ILE 50 50 50 ILE ILE A . n A 1 51 ASP 51 51 51 ASP ASP A . n A 1 52 ALA 52 52 52 ALA ALA A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 LYS 54 54 54 LYS LYS A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 LYS 57 57 57 LYS LYS A . n A 1 58 GLU 58 58 58 GLU GLU A . n A 1 59 LEU 59 59 59 LEU LEU A . n A 1 60 ASN 60 60 60 ASN ASN A . n A 1 61 GLU 61 61 61 GLU GLU A . n A 1 62 TYR 62 62 62 TYR TYR A . n A 1 63 PHE 63 63 63 PHE PHE A . n A 1 64 GLU 64 64 64 GLU GLU A . n A 1 65 LYS 65 65 65 LYS LYS A . n A 1 66 LYS 66 66 66 LYS LYS A . n A 1 67 GLU 67 67 67 GLU GLU A . n A 1 68 VAL 68 68 68 VAL VAL A . n A 1 69 LEU 69 69 69 LEU LEU A . n A 1 70 GLU 70 70 70 GLU GLU A . n A 1 71 HIS 71 71 ? ? ? A . n A 1 72 HIS 72 72 ? ? ? A . n A 1 73 HIS 73 73 ? ? ? A . n A 1 74 HIS 74 74 ? ? ? A . n A 1 75 HIS 75 75 ? ? ? A . n A 1 76 HIS 76 76 ? ? ? A . n # _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.id 1 _pdbx_SG_project.initial_of_center NESG _pdbx_SG_project.project_name 'PSI, Protein Structure Initiative' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-08-19 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' # _pdbx_nmr_ensemble_rms.atom_type ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev ? _pdbx_nmr_ensemble_rms.bond_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.chain_range_begin ? _pdbx_nmr_ensemble_rms.chain_range_end ? _pdbx_nmr_ensemble_rms.coord_average_rmsd_method ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev ? _pdbx_nmr_ensemble_rms.covalent_bond_rms_dev_error ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev ? _pdbx_nmr_ensemble_rms.dihedral_angles_rms_dev_error ? _pdbx_nmr_ensemble_rms.distance_rms_dev 0.01 _pdbx_nmr_ensemble_rms.distance_rms_dev_error ? _pdbx_nmr_ensemble_rms.entry_id 2K53 _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev ? _pdbx_nmr_ensemble_rms.improper_torsion_angle_rms_dev_error ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev ? _pdbx_nmr_ensemble_rms.peptide_planarity_rms_dev_error ? _pdbx_nmr_ensemble_rms.residue_range_begin ? _pdbx_nmr_ensemble_rms.residue_range_end ? # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'A3DK08 Protein' 0.91 mM '[U-100% 13C; U-100% 15N]' 1 'A3DK08 Protein' 1.05 mM '[U-10% 13C; U-99% 15N]' 2 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2K53 _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 854 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count 325 _pdbx_nmr_constraints.NOE_long_range_total_count 160 _pdbx_nmr_constraints.NOE_medium_range_total_count 134 _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count 185 _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count 45 _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count 45 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 SER A 35 ? ? -69.70 20.61 2 1 SER A 36 ? ? -146.69 -46.42 3 2 SER A 35 ? ? -64.03 1.58 4 2 SER A 36 ? ? -133.50 -50.28 5 3 LEU A 31 ? ? -177.00 107.78 6 4 CYS A 30 ? ? -73.20 -164.34 7 5 SER A 35 ? ? -67.23 76.80 8 5 SER A 36 ? ? 156.36 -30.54 9 5 MET A 37 ? ? -103.60 -68.33 10 7 MET A 37 ? ? -100.15 -71.66 11 10 SER A 35 ? ? 39.44 -83.44 12 14 SER A 36 ? ? -57.24 -8.20 13 15 LEU A 31 ? ? -54.09 106.55 14 16 MET A 37 ? ? -121.74 -61.14 15 17 LEU A 31 ? ? -169.95 83.30 16 17 MET A 37 ? ? -125.69 -69.19 17 18 LEU A 31 ? ? -85.80 36.79 18 18 MET A 37 ? ? -104.93 -67.28 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A HIS 71 ? A HIS 71 2 1 Y 1 A HIS 72 ? A HIS 72 3 1 Y 1 A HIS 73 ? A HIS 73 4 1 Y 1 A HIS 74 ? A HIS 74 5 1 Y 1 A HIS 75 ? A HIS 75 6 1 Y 1 A HIS 76 ? A HIS 76 7 2 Y 1 A HIS 71 ? A HIS 71 8 2 Y 1 A HIS 72 ? A HIS 72 9 2 Y 1 A HIS 73 ? A HIS 73 10 2 Y 1 A HIS 74 ? A HIS 74 11 2 Y 1 A HIS 75 ? A HIS 75 12 2 Y 1 A HIS 76 ? A HIS 76 13 3 Y 1 A HIS 71 ? A HIS 71 14 3 Y 1 A HIS 72 ? A HIS 72 15 3 Y 1 A HIS 73 ? A HIS 73 16 3 Y 1 A HIS 74 ? A HIS 74 17 3 Y 1 A HIS 75 ? A HIS 75 18 3 Y 1 A HIS 76 ? A HIS 76 19 4 Y 1 A HIS 71 ? A HIS 71 20 4 Y 1 A HIS 72 ? A HIS 72 21 4 Y 1 A HIS 73 ? A HIS 73 22 4 Y 1 A HIS 74 ? A HIS 74 23 4 Y 1 A HIS 75 ? A HIS 75 24 4 Y 1 A HIS 76 ? A HIS 76 25 5 Y 1 A HIS 71 ? A HIS 71 26 5 Y 1 A HIS 72 ? A HIS 72 27 5 Y 1 A HIS 73 ? A HIS 73 28 5 Y 1 A HIS 74 ? A HIS 74 29 5 Y 1 A HIS 75 ? A HIS 75 30 5 Y 1 A HIS 76 ? A HIS 76 31 6 Y 1 A HIS 71 ? A HIS 71 32 6 Y 1 A HIS 72 ? A HIS 72 33 6 Y 1 A HIS 73 ? A HIS 73 34 6 Y 1 A HIS 74 ? A HIS 74 35 6 Y 1 A HIS 75 ? A HIS 75 36 6 Y 1 A HIS 76 ? A HIS 76 37 7 Y 1 A HIS 71 ? A HIS 71 38 7 Y 1 A HIS 72 ? A HIS 72 39 7 Y 1 A HIS 73 ? A HIS 73 40 7 Y 1 A HIS 74 ? A HIS 74 41 7 Y 1 A HIS 75 ? A HIS 75 42 7 Y 1 A HIS 76 ? A HIS 76 43 8 Y 1 A HIS 71 ? A HIS 71 44 8 Y 1 A HIS 72 ? A HIS 72 45 8 Y 1 A HIS 73 ? A HIS 73 46 8 Y 1 A HIS 74 ? A HIS 74 47 8 Y 1 A HIS 75 ? A HIS 75 48 8 Y 1 A HIS 76 ? A HIS 76 49 9 Y 1 A HIS 71 ? A HIS 71 50 9 Y 1 A HIS 72 ? A HIS 72 51 9 Y 1 A HIS 73 ? A HIS 73 52 9 Y 1 A HIS 74 ? A HIS 74 53 9 Y 1 A HIS 75 ? A HIS 75 54 9 Y 1 A HIS 76 ? A HIS 76 55 10 Y 1 A HIS 71 ? A HIS 71 56 10 Y 1 A HIS 72 ? A HIS 72 57 10 Y 1 A HIS 73 ? A HIS 73 58 10 Y 1 A HIS 74 ? A HIS 74 59 10 Y 1 A HIS 75 ? A HIS 75 60 10 Y 1 A HIS 76 ? A HIS 76 61 11 Y 1 A HIS 71 ? A HIS 71 62 11 Y 1 A HIS 72 ? A HIS 72 63 11 Y 1 A HIS 73 ? A HIS 73 64 11 Y 1 A HIS 74 ? A HIS 74 65 11 Y 1 A HIS 75 ? A HIS 75 66 11 Y 1 A HIS 76 ? A HIS 76 67 12 Y 1 A HIS 71 ? A HIS 71 68 12 Y 1 A HIS 72 ? A HIS 72 69 12 Y 1 A HIS 73 ? A HIS 73 70 12 Y 1 A HIS 74 ? A HIS 74 71 12 Y 1 A HIS 75 ? A HIS 75 72 12 Y 1 A HIS 76 ? A HIS 76 73 13 Y 1 A HIS 71 ? A HIS 71 74 13 Y 1 A HIS 72 ? A HIS 72 75 13 Y 1 A HIS 73 ? A HIS 73 76 13 Y 1 A HIS 74 ? A HIS 74 77 13 Y 1 A HIS 75 ? A HIS 75 78 13 Y 1 A HIS 76 ? A HIS 76 79 14 Y 1 A HIS 71 ? A HIS 71 80 14 Y 1 A HIS 72 ? A HIS 72 81 14 Y 1 A HIS 73 ? A HIS 73 82 14 Y 1 A HIS 74 ? A HIS 74 83 14 Y 1 A HIS 75 ? A HIS 75 84 14 Y 1 A HIS 76 ? A HIS 76 85 15 Y 1 A HIS 71 ? A HIS 71 86 15 Y 1 A HIS 72 ? A HIS 72 87 15 Y 1 A HIS 73 ? A HIS 73 88 15 Y 1 A HIS 74 ? A HIS 74 89 15 Y 1 A HIS 75 ? A HIS 75 90 15 Y 1 A HIS 76 ? A HIS 76 91 16 Y 1 A HIS 71 ? A HIS 71 92 16 Y 1 A HIS 72 ? A HIS 72 93 16 Y 1 A HIS 73 ? A HIS 73 94 16 Y 1 A HIS 74 ? A HIS 74 95 16 Y 1 A HIS 75 ? A HIS 75 96 16 Y 1 A HIS 76 ? A HIS 76 97 17 Y 1 A HIS 71 ? A HIS 71 98 17 Y 1 A HIS 72 ? A HIS 72 99 17 Y 1 A HIS 73 ? A HIS 73 100 17 Y 1 A HIS 74 ? A HIS 74 101 17 Y 1 A HIS 75 ? A HIS 75 102 17 Y 1 A HIS 76 ? A HIS 76 103 18 Y 1 A HIS 71 ? A HIS 71 104 18 Y 1 A HIS 72 ? A HIS 72 105 18 Y 1 A HIS 73 ? A HIS 73 106 18 Y 1 A HIS 74 ? A HIS 74 107 18 Y 1 A HIS 75 ? A HIS 75 108 18 Y 1 A HIS 76 ? A HIS 76 109 19 Y 1 A HIS 71 ? A HIS 71 110 19 Y 1 A HIS 72 ? A HIS 72 111 19 Y 1 A HIS 73 ? A HIS 73 112 19 Y 1 A HIS 74 ? A HIS 74 113 19 Y 1 A HIS 75 ? A HIS 75 114 19 Y 1 A HIS 76 ? A HIS 76 115 20 Y 1 A HIS 71 ? A HIS 71 116 20 Y 1 A HIS 72 ? A HIS 72 117 20 Y 1 A HIS 73 ? A HIS 73 118 20 Y 1 A HIS 74 ? A HIS 74 119 20 Y 1 A HIS 75 ? A HIS 75 120 20 Y 1 A HIS 76 ? A HIS 76 #