HEADER METAL TRANSPORT 27-JUN-08 2K5F TITLE SOLUTION NMR STRUCTURE OF FEOA PROTEIN FROM CHLOROBIUM TEPIDUM. TITLE 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET CTR121 COMPND MOL_ID: 1; COMPND 2 MOLECULE: FERROUS IRON TRANSPORT PROTEIN A; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHLOROBACULUM TEPIDUM; SOURCE 3 ORGANISM_TAXID: 1097; SOURCE 4 GENE: FEOA-2, CT0057; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)+ MAGIC; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET 21-23C KEYWDS SH3-LIKE, ALPHA+BETA, GFT, STRUCTURAL GENOMICS, PSI-2, PROTEIN KEYWDS 2 STRUCTURE INITIATIVE, NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, KEYWDS 3 NESG, METAL TRANSPORT EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR A.ELETSKY,B.SATHYAMOORTHY,J.L.MILLS,A.ZERI,L.ZHAO,K.HAMILTON, AUTHOR 2 E.L.FOOTE,R.XIAO,R.NAIR,M.C.BARAN,G.V.T.SWAPNA,T.B.ACTON,B.ROST, AUTHOR 3 G.T.MONTELIONE,T.SZYPERSKI,NORTHEAST STRUCTURAL GENOMICS CONSORTIUM AUTHOR 4 (NESG) REVDAT 5 08-MAY-24 2K5F 1 REMARK REVDAT 4 14-JUN-23 2K5F 1 REMARK REVDAT 3 19-FEB-20 2K5F 1 REMARK SEQADV REVDAT 2 24-FEB-09 2K5F 1 VERSN REVDAT 1 19-AUG-08 2K5F 0 JRNL AUTH A.ELETSKY,B.SATHYAMOORTHY,J.L.MILLS,A.ZERI,L.ZHAO, JRNL AUTH 2 K.HAMILTON,E.L.FOOTE,R.XIAO,R.NAIR,M.C.BARAN,G.V.T.SWAPNA, JRNL AUTH 3 T.B.ACTON,B.L.ROST,G.T.MONTELIONE,T.SZYPERSKI JRNL TITL SOLUTION NMR STRUCTURE OF FEOA PROTEIN FROM CHLOROBIUM JRNL TITL 2 TEPIDUM. NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET JRNL TITL 3 CTR121 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : VNMRJ 2.1B, CNS 1.2 REMARK 3 AUTHORS : VARIAN (VNMRJ), BRUNGER, ADAMS, CLORE, GROS, REMARK 3 NILGES AND READ (CNS) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: CYANA 2.1, CNS 1.2 REMARK 4 REMARK 4 2K5F COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-JUN-08. REMARK 100 THE DEPOSITION ID IS D_1000100698. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 115 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1.26 MM [U-100% 13C; U-100% 15N] REMARK 210 FEOA PROTEIN, 0.02 % SODIUM REMARK 210 AZIDE, 100 MM DTT, 5 MM CALCIUM REMARK 210 CHLORIDE, 100 MM SODIUM CHLORIDE, REMARK 210 20 MM MES, 50 UM DSS, 90% H2O/ REMARK 210 10% D2O; 1.26 MM [U-5% 13C; U- REMARK 210 100% 15N] FEOA PROTEIN, 0.02 % REMARK 210 SODIUM AZIDE, 100 MM DTT, 5 MM REMARK 210 CALCIUM CHLORIDE, 100 MM SODIUM REMARK 210 CHLORIDE, 20 MM MES, 50 UM DSS, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCO; 3D CBCA(CO)NH; 3D REMARK 210 HNCACB; 3D HBHA(CO)NH; 3D HCCH- REMARK 210 TOCSY; (4,3)D GFT HCCH-COSY ALI; REMARK 210 (4,3)D GFT L-HCCH-COSY ARO; 3D REMARK 210 HNHA; 3D HNCO (HBOND); 3D 1H-15N, REMARK 210 13CALI,13CARO NOESY; 2D 1H-13C REMARK 210 CT-HSQC 28MS REMARK 210 SPECTROMETER FIELD STRENGTH : 750 MHZ REMARK 210 SPECTROMETER MODEL : INOVA REMARK 210 SPECTROMETER MANUFACTURER : VARIAN REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : PROSA 6.0.2, CARA 1.8.4, XEASY REMARK 210 1.3.13, AUTOASSIGN 1.15.1, CSI REMARK 210 2.0, TALOS 2003.027.13.05, CYANA REMARK 210 2.1, AUTOSTRUCTURE 2.2.1, PSVS REMARK 210 1.3 REMARK 210 METHOD USED : SIMULATED ANNEALING, SIMULATED REMARK 210 ANNEALING IN EXPLICIT WATER BATH REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HB2 LYS A 2 HG3 GLU A 5 1.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 PRO A 45 8.00 -58.41 REMARK 500 1 LEU A 46 -36.85 -131.34 REMARK 500 1 LEU A 74 42.92 -86.67 REMARK 500 1 HIS A 80 75.16 67.34 REMARK 500 1 LYS A 95 157.41 70.84 REMARK 500 1 ARG A 96 95.10 -68.80 REMARK 500 1 HIS A 100 -44.14 -178.30 REMARK 500 2 PRO A 45 5.99 -62.81 REMARK 500 2 ASP A 77 -65.55 -151.06 REMARK 500 2 GLU A 78 99.96 65.34 REMARK 500 2 PRO A 85 86.63 -54.21 REMARK 500 2 PHE A 87 70.37 59.81 REMARK 500 2 ARG A 90 30.54 -157.93 REMARK 500 2 HIS A 100 -169.22 -106.77 REMARK 500 3 PRO A 45 6.13 -61.11 REMARK 500 3 ALA A 75 77.80 -156.54 REMARK 500 3 TRP A 84 144.01 -175.67 REMARK 500 3 PRO A 85 109.21 -57.38 REMARK 500 3 ARG A 88 92.08 68.01 REMARK 500 3 ARG A 92 -56.79 -136.54 REMARK 500 3 PHE A 93 97.63 61.72 REMARK 500 3 LYS A 95 163.19 71.21 REMARK 500 3 ARG A 96 71.76 67.03 REMARK 500 3 GLU A 99 -170.79 66.65 REMARK 500 3 HIS A 101 -73.82 -101.16 REMARK 500 3 HIS A 102 -170.75 61.25 REMARK 500 3 HIS A 104 -75.29 -91.53 REMARK 500 4 PRO A 45 7.14 -58.19 REMARK 500 4 ALA A 75 102.22 -161.92 REMARK 500 4 LYS A 95 171.03 67.01 REMARK 500 4 ARG A 96 -73.00 -151.56 REMARK 500 4 ALA A 97 -61.29 -169.61 REMARK 500 4 HIS A 104 -179.07 60.98 REMARK 500 5 PRO A 45 6.35 -61.08 REMARK 500 5 ASP A 48 128.89 -172.77 REMARK 500 5 ALA A 75 -170.41 -170.91 REMARK 500 5 ARG A 88 85.97 62.53 REMARK 500 5 HIS A 91 -76.04 -162.53 REMARK 500 5 ARG A 92 102.99 64.92 REMARK 500 5 HIS A 103 -57.27 -159.99 REMARK 500 6 ALA A 8 137.14 71.52 REMARK 500 6 ALA A 19 -176.33 -172.60 REMARK 500 6 PRO A 45 -7.16 -54.00 REMARK 500 6 ALA A 75 -154.59 -151.91 REMARK 500 6 GLU A 78 -85.40 -85.43 REMARK 500 6 PRO A 81 103.18 -56.42 REMARK 500 6 PRO A 85 98.72 -46.94 REMARK 500 7 ALA A 8 130.37 69.75 REMARK 500 7 PRO A 45 5.17 -61.16 REMARK 500 7 PHE A 87 91.14 62.22 REMARK 500 REMARK 500 THIS ENTRY HAS 147 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: CTR121 RELATED DB: TARGETDB REMARK 900 RELATED ID: 15834 RELATED DB: BMRB DBREF 2K5F A 1 97 UNP Q8KGB1 Q8KGB1_CHLTE 1 97 SEQADV 2K5F LEU A 98 UNP Q8KGB1 EXPRESSION TAG SEQADV 2K5F GLU A 99 UNP Q8KGB1 EXPRESSION TAG SEQADV 2K5F HIS A 100 UNP Q8KGB1 EXPRESSION TAG SEQADV 2K5F HIS A 101 UNP Q8KGB1 EXPRESSION TAG SEQADV 2K5F HIS A 102 UNP Q8KGB1 EXPRESSION TAG SEQADV 2K5F HIS A 103 UNP Q8KGB1 EXPRESSION TAG SEQADV 2K5F HIS A 104 UNP Q8KGB1 EXPRESSION TAG SEQADV 2K5F HIS A 105 UNP Q8KGB1 EXPRESSION TAG SEQRES 1 A 105 MET LYS LEU SER GLU LEU LYS ALA GLY ASP ARG ALA GLU SEQRES 2 A 105 VAL THR SER VAL ALA ALA GLU PRO ALA VAL ARG ARG ARG SEQRES 3 A 105 LEU MET ASP LEU GLY LEU VAL ARG GLY ALA LYS LEU LYS SEQRES 4 A 105 VAL LEU ARG PHE ALA PRO LEU GLY ASP PRO ILE GLU VAL SEQRES 5 A 105 ASN CYS ASN GLY MET LEU LEU THR MET ARG ARG ASN GLU SEQRES 6 A 105 ALA GLU GLY ILE THR VAL HIS ILE LEU ALA GLY ASP GLU SEQRES 7 A 105 GLY HIS PRO HIS GLY TRP PRO GLY PHE ARG ARG ARG HIS SEQRES 8 A 105 ARG PHE GLY LYS ARG ALA LEU GLU HIS HIS HIS HIS HIS SEQRES 9 A 105 HIS HELIX 1 1 LYS A 2 LEU A 6 5 5 HELIX 2 2 GLU A 20 GLY A 31 1 12 HELIX 3 3 ARG A 62 GLY A 68 1 7 SHEET 1 A 5 MET A 57 MET A 61 0 SHEET 2 A 5 ILE A 50 CYS A 54 -1 N VAL A 52 O LEU A 59 SHEET 3 A 5 LYS A 37 PHE A 43 -1 N LYS A 39 O ASN A 53 SHEET 4 A 5 ARG A 11 VAL A 17 -1 N ALA A 12 O LEU A 38 SHEET 5 A 5 ILE A 69 ILE A 73 -1 O THR A 70 N SER A 16 CISPEP 1 ASP A 48 PRO A 49 1 1.75 CISPEP 2 ASP A 48 PRO A 49 2 1.69 CISPEP 3 ASP A 48 PRO A 49 3 0.58 CISPEP 4 ASP A 48 PRO A 49 4 0.59 CISPEP 5 ASP A 48 PRO A 49 5 -0.21 CISPEP 6 ASP A 48 PRO A 49 6 0.38 CISPEP 7 ASP A 48 PRO A 49 7 1.56 CISPEP 8 ASP A 48 PRO A 49 8 -0.74 CISPEP 9 ASP A 48 PRO A 49 9 0.70 CISPEP 10 ASP A 48 PRO A 49 10 1.30 CISPEP 11 ASP A 48 PRO A 49 11 1.47 CISPEP 12 ASP A 48 PRO A 49 12 -0.57 CISPEP 13 ASP A 48 PRO A 49 13 2.56 CISPEP 14 ASP A 48 PRO A 49 14 1.53 CISPEP 15 ASP A 48 PRO A 49 15 1.19 CISPEP 16 ASP A 48 PRO A 49 16 0.94 CISPEP 17 ASP A 48 PRO A 49 17 -1.02 CISPEP 18 ASP A 48 PRO A 49 18 1.09 CISPEP 19 ASP A 48 PRO A 49 19 1.11 CISPEP 20 ASP A 48 PRO A 49 20 2.95 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1