HEADER PROTEIN BINDING 02-SEP-08 2K85 TITLE P190-A RHOGAP FF1 DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: GLUCOCORTICOID RECEPTOR DNA-BINDING FACTOR 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 267-331; COMPND 5 SYNONYM: GLUCOCORTICOID RECEPTOR REPRESSION FACTOR 1, GRF-1, RHO GAP COMPND 6 P190A, P190-A; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GRLF1, GRF1, KIAA1722; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET_TRX; SOURCE 10 OTHER_DETAILS: CONTAINS A HIS-TAG, A THIOREDOXIN FUSION PROTEIN AND SOURCE 11 A TEV CLEAVAGE-SITE KEYWDS FF DOMAIN, P190-A RHOGAP, PROTEIN PHOSPHORYLATION, ALTERNATIVE KEYWDS 2 SPLICING, ANTI-ONCOGENE, CELL CYCLE, CYTOPLASM, DNA-BINDING, GTPASE KEYWDS 3 ACTIVATION, NUCLEUS, PHOSPHOPROTEIN, REPRESSOR, TRANSCRIPTION, KEYWDS 4 TRANSCRIPTION REGULATION, PROTEIN BINDING EXPDTA SOLUTION NMR NUMMDL 15 AUTHOR R.BONET,L.RUIZ,P.MARTIN-MALPARTIDA,M.MACIAS REVDAT 4 14-JUN-23 2K85 1 REMARK REVDAT 3 19-FEB-20 2K85 1 REMARK SEQADV REVDAT 2 16-JUN-09 2K85 1 JRNL REVDAT 1 19-MAY-09 2K85 0 JRNL AUTH R.BONET,L.RUIZ,E.ARAGON,P.MARTIN-MALPARTIDA,M.J.MACIAS JRNL TITL NMR STRUCTURAL STUDIES ON HUMAN P190-A RHOGAPFF1 REVEALED JRNL TITL 2 THAT DOMAIN PHOSPHORYLATION BY THE PDGF-RECEPTOR ALPHA JRNL TITL 3 REQUIRES ITS PREVIOUS UNFOLDING. JRNL REF J.MOL.BIOL. V. 389 230 2009 JRNL REFN ISSN 0022-2836 JRNL PMID 19393245 JRNL DOI 10.1016/J.JMB.2009.04.035 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : ARIA, ARIA REMARK 3 AUTHORS : BRUNGER, ADAMS, CLORE, GROS, NILGES AND READ REMARK 3 (ARIA), BRUNGER, ADAMS, CLORE, GROS, NILGES AND REMARK 3 READ (ARIA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K85 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000100796. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 285 REMARK 210 PH : 7.2 REMARK 210 IONIC STRENGTH : 0.2 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM P190-A RHOGAP FF1 DOMAIN, REMARK 210 50 MM SODIUM PHOSPHATE, 150 MM REMARK 210 SODIUM CHLORIDE, 0.5 MM SODIUM REMARK 210 AZIDE, 90% H2O/10% D2O; 0.5 MM REMARK 210 [U-100% 13C; U-100% 15N] P190-A REMARK 210 RHOGAP FF1 DOMAIN, 50 MM SODIUM REMARK 210 PHOSPHATE, 150 MM SODIUM REMARK 210 CHLORIDE, 0.5 MM SODIUM AZIDE, REMARK 210 90% H2O/10% D2O; 0.5 MM [U-100% REMARK 210 13C; U-100% 15N] P190-A RHOGAP REMARK 210 FF1 DOMAIN, 50 MM SODIUM REMARK 210 PHOSPHATE, 150 MM SODIUM REMARK 210 CHLORIDE, 0.5 MM SODIUM AZIDE, REMARK 210 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-1H TOCSY; 2D 1H-1H NOESY; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D 1H- REMARK 210 15N NOESY; 3D HNHA; 3D HCCH- REMARK 210 TOCSY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : XEASY, NMRPIPE REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 80 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 15 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-15 REMARK 465 RES C SSSEQI REMARK 465 GLY A 1 REMARK 465 ALA A 2 REMARK 465 MET A 3 REMARK 465 GLY A 4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HA HIS A 64 HE2 LYS A 67 1.26 REMARK 500 OE1 GLU A 50 HZ2 LYS A 54 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 9 -65.22 -92.64 REMARK 500 1 ILE A 22 -63.53 -103.59 REMARK 500 1 LYS A 24 -64.46 -99.20 REMARK 500 1 HIS A 26 -11.19 63.13 REMARK 500 1 GLU A 50 -74.49 -84.64 REMARK 500 1 HIS A 68 96.19 -176.71 REMARK 500 2 LYS A 24 -52.48 -133.67 REMARK 500 2 HIS A 26 -5.05 60.34 REMARK 500 2 GLU A 50 -76.18 -83.76 REMARK 500 2 HIS A 68 91.34 -172.25 REMARK 500 3 ILE A 22 -66.00 -108.88 REMARK 500 3 HIS A 26 -12.14 64.06 REMARK 500 3 ASN A 27 33.41 -84.98 REMARK 500 3 GLU A 50 -71.47 -84.53 REMARK 500 3 HIS A 68 104.78 -175.24 REMARK 500 4 ILE A 22 -68.04 -107.60 REMARK 500 4 HIS A 26 -0.06 60.60 REMARK 500 4 LYS A 36 -72.22 -52.32 REMARK 500 4 GLU A 50 -92.39 -88.75 REMARK 500 4 HIS A 68 97.64 -167.76 REMARK 500 5 ILE A 22 -69.71 -105.88 REMARK 500 5 LYS A 24 -60.52 -109.94 REMARK 500 5 HIS A 26 -14.62 65.19 REMARK 500 5 ALA A 39 23.11 -79.99 REMARK 500 5 HIS A 68 116.29 -175.56 REMARK 500 6 GLN A 7 -49.59 -156.31 REMARK 500 6 ILE A 22 -66.29 -105.52 REMARK 500 6 HIS A 26 -2.81 62.28 REMARK 500 6 ASN A 27 30.55 -92.74 REMARK 500 6 GLU A 50 -75.39 -83.37 REMARK 500 6 HIS A 68 101.98 -175.67 REMARK 500 7 GLN A 7 -50.06 71.72 REMARK 500 7 HIS A 26 -2.16 59.72 REMARK 500 7 ASN A 27 34.95 -89.80 REMARK 500 7 GLU A 50 -84.56 -96.42 REMARK 500 7 HIS A 68 91.45 -162.31 REMARK 500 8 GLN A 7 -41.62 -179.20 REMARK 500 8 ILE A 22 -66.14 -107.58 REMARK 500 8 HIS A 26 8.90 52.25 REMARK 500 8 ALA A 39 42.27 -79.56 REMARK 500 8 GLU A 50 -73.92 -89.69 REMARK 500 8 HIS A 68 101.34 -170.06 REMARK 500 9 HIS A 26 6.94 56.50 REMARK 500 9 ASN A 27 41.80 -89.46 REMARK 500 9 ALA A 39 21.48 -76.97 REMARK 500 9 GLU A 50 -81.65 -83.46 REMARK 500 9 HIS A 68 97.42 -174.46 REMARK 500 10 GLN A 6 -49.77 66.89 REMARK 500 10 ILE A 22 -69.71 -103.64 REMARK 500 10 HIS A 26 -2.75 58.95 REMARK 500 REMARK 500 THIS ENTRY HAS 83 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15938 RELATED DB: BMRB DBREF 2K85 A 5 69 UNP Q9NRY4 GRLF1_HUMAN 267 331 SEQADV 2K85 GLY A 1 UNP Q9NRY4 EXPRESSION TAG SEQADV 2K85 ALA A 2 UNP Q9NRY4 EXPRESSION TAG SEQADV 2K85 MET A 3 UNP Q9NRY4 EXPRESSION TAG SEQADV 2K85 GLY A 4 UNP Q9NRY4 EXPRESSION TAG SEQRES 1 A 69 GLY ALA MET GLY SER GLN GLN ILE ALA THR ALA LYS ASP SEQRES 2 A 69 LYS TYR GLU TRP LEU VAL SER ARG ILE VAL LYS ASN HIS SEQRES 3 A 69 ASN GLU ASN TRP LEU SER VAL SER ARG LYS MET GLN ALA SEQRES 4 A 69 SER PRO GLU TYR GLN ASP TYR VAL TYR LEU GLU GLY THR SEQRES 5 A 69 GLN LYS ALA LYS LYS LEU PHE LEU GLN HIS ILE HIS ARG SEQRES 6 A 69 LEU LYS HIS GLU HELIX 1 1 ALA A 9 VAL A 23 1 15 HELIX 2 2 ASN A 29 GLN A 38 1 10 HELIX 3 3 SER A 40 GLU A 50 1 11 HELIX 4 4 GLY A 51 GLU A 69 1 19 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1