HEADER HYDROLASE 04-SEP-08 2K88 TITLE ASSOCIATION OF SUBUNIT D (VMA6P) AND E (VMA4P) WITH G (VMA10P) AND THE TITLE 2 NMR SOLUTION STRUCTURE OF SUBUNIT G (G1-59) OF THE SACCHAROMYCES TITLE 3 CEREVISIAE V1VO ATPASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: VACUOLAR PROTON PUMP SUBUNIT G; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: G(1-59)SUBUNIT OF V1VO ATPASE; COMPND 5 SYNONYM: V-ATPASE SUBUNIT G, V-ATPASE 13 KDA SUBUNIT; COMPND 6 EC: 3.6.3.14; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BREWER'S YEAST,LAGER BEER YEAST,YEAST; SOURCE 4 ORGANISM_TAXID: 4932; SOURCE 5 GENE: VMA10, YHR039C-A, YHR039BC, YHR039C-B; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET9D KEYWDS G SUBUNIT, V1VO ATPASE, VMA10P, HYDROGEN ION TRANSPORT, HYDROLASE, KEYWDS 2 ION TRANSPORT, TRANSPORT EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR N.SANKARANARAYANAN,S.GAYEN,Y.THAKER,V.SUBRAMANIAN,M.S.S.MANIMEKALAI, AUTHOR 2 G.GRUBER REVDAT 3 22-MAY-24 2K88 1 REMARK REVDAT 2 16-MAR-22 2K88 1 REMARK SEQADV REVDAT 1 11-AUG-09 2K88 0 JRNL AUTH S.RISHIKESAN,S.GAYEN,Y.R.THAKER,S.VIVEKANANDAN, JRNL AUTH 2 M.S.MANIMEKALAI,Y.H.YAU,S.G.SHOCHAT,G.GRUBER JRNL TITL ASSEMBLY OF SUBUNIT D (VMA6P) AND G (VMA10P) AND THE NMR JRNL TITL 2 SOLUTION STRUCTURE OF SUBUNIT G (G(1-59)) OF THE JRNL TITL 3 SACCHAROMYCES CEREVISIAE V(1)V(O) ATPASE. JRNL REF BIOCHIM.BIOPHYS.ACTA V.1787 242 2009 JRNL REFN ISSN 0006-3002 JRNL PMID 19344662 JRNL DOI 10.1016/J.BBABIO.2009.01.010 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.0 REMARK 3 AUTHORS : GUNTERT, P. ET AL. REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K88 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 26-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000100799. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 288 REMARK 210 PH : 6.8 REMARK 210 IONIC STRENGTH : 0 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 25 MM SODIUM PHOSPHATE, 90% REMARK 210 H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HNCACB; 3D REMARK 210 HNCO; 3D H(CCO)NH; 3D C(CO)NH; REMARK 210 3D 1H-15N NOESY; 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : TOPSPIN, SPARKY, MOLMOL REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 10 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 9 -45.40 -173.60 REMARK 500 1 GLU A 57 172.84 62.73 REMARK 500 2 LYS A 5 147.98 -175.75 REMARK 500 2 ASN A 6 76.28 -158.51 REMARK 500 2 ILE A 8 -71.07 -120.46 REMARK 500 2 GLU A 57 169.14 62.48 REMARK 500 2 PHE A 58 -52.86 -153.46 REMARK 500 3 VAL A 2 44.81 -144.34 REMARK 500 3 SER A 3 101.43 -57.64 REMARK 500 3 ASN A 6 43.55 -174.53 REMARK 500 3 GLU A 57 129.42 -176.19 REMARK 500 4 VAL A 2 -36.50 -176.91 REMARK 500 4 SER A 3 119.40 -169.20 REMARK 500 4 GLU A 57 -176.66 59.67 REMARK 500 4 GLU A 59 -37.35 -179.24 REMARK 500 5 SER A 3 95.80 -169.50 REMARK 500 5 ASN A 6 95.23 -176.34 REMARK 500 5 GLU A 59 55.02 -168.39 REMARK 500 6 ALA A 9 -62.73 -95.22 REMARK 500 6 GLU A 57 178.72 58.78 REMARK 500 7 VAL A 2 -44.31 -131.88 REMARK 500 7 ILE A 8 -70.80 -108.95 REMARK 500 7 GLU A 57 54.93 -111.37 REMARK 500 7 PHE A 58 -47.47 -145.78 REMARK 500 8 SER A 3 49.02 -142.43 REMARK 500 8 ALA A 9 -73.57 -51.74 REMARK 500 9 GLU A 59 38.29 -144.46 REMARK 500 10 VAL A 2 101.13 -54.57 REMARK 500 10 LYS A 5 -63.26 -95.54 REMARK 500 10 ILE A 8 44.93 -98.30 REMARK 500 10 ALA A 9 -68.95 -125.71 REMARK 500 REMARK 500 REMARK: NULL DBREF 2K88 A 3 59 UNP P48836 VATG_YEAST 2 58 SEQADV 2K88 MET A 1 UNP P48836 EXPRESSION TAG SEQADV 2K88 VAL A 2 UNP P48836 EXPRESSION TAG SEQADV 2K88 CYS A 60 UNP P48836 EXPRESSION TAG SEQRES 1 A 60 MET VAL SER GLN LYS ASN GLY ILE ALA THR LEU LEU GLN SEQRES 2 A 60 ALA GLU LYS GLU ALA HIS GLU ILE VAL SER LYS ALA ARG SEQRES 3 A 60 LYS TYR ARG GLN ASP LYS LEU LYS GLN ALA LYS THR ASP SEQRES 4 A 60 ALA ALA LYS GLU ILE ASP SER TYR LYS ILE GLN LYS ASP SEQRES 5 A 60 LYS GLU LEU LYS GLU PHE GLU CYS HELIX 1 1 THR A 10 GLU A 57 1 48 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1