HEADER SIGNALING PROTEIN 10-SEP-08 2K8H TITLE SOLUTION STRUCTURE OF SUMO FROM TRYPANOSOMA BRUCEI COMPND MOL_ID: 1; COMPND 2 MOLECULE: SMALL UBIQUITIN PROTEIN; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 8-108; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: TRYPANOSOMA BRUCEI; SOURCE 3 ORGANISM_TAXID: 5691; SOURCE 4 GENE: TB927.5.3210; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PET22B(+) KEYWDS SUMO, TRYPANOSOMA BRUCEI, POST-TRANSLATIONAL MODIFIER, SIGNALING KEYWDS 2 PROTEIN EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR Q.SHANG,X.TU REVDAT 4 29-MAY-24 2K8H 1 REMARK REVDAT 3 16-MAR-22 2K8H 1 REMARK SEQADV REVDAT 2 19-MAY-09 2K8H 1 JRNL REVDAT 1 21-APR-09 2K8H 0 JRNL AUTH Q.SHANG,C.XU,J.ZHANG,X.ZHANG,X.TU JRNL TITL SOLUTION STRUCTURE OF SUMO FROM TRYPANOSOMA BRUCEI AND ITS JRNL TITL 2 INTERACTION WITH UBC9 JRNL REF PROTEINS V. 76 266 2009 JRNL REFN ISSN 0887-3585 JRNL PMID 19343802 JRNL DOI 10.1002/PROT.22409 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER, WUTHRICH (CYANA), GUNTERT, REMARK 3 MUMENTHALER, WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K8H COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 12-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000100808. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.25 REMARK 210 IONIC STRENGTH : 0.2 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 0.5-1.0MM [U-99% 13C; U-99% 15N] REMARK 210 SMALL UBIQUITIN-LIKE MODIFIER, REMARK 210 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 3D CBCA(CO)NH; 3D C(CO)NH; 3D REMARK 210 HNCO; 3D HBHA(CO)NH; 3D 1H-15N REMARK 210 NOESY; 3D 1H-13C NOESY; 3D REMARK 210 HNCACB; 3D H(CCO)NH; 3D HCCH- REMARK 210 TOCSY REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ REMARK 210 SPECTROMETER MODEL : DMX REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : DGSA-DISTANCE GEOMETRY SIMULATED REMARK 210 ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 500 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 465 SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 MODELS 1-20 REMARK 465 RES C SSSEQI REMARK 465 LEU A 103 REMARK 465 GLU A 104 REMARK 465 HIS A 105 REMARK 465 HIS A 106 REMARK 465 HIS A 107 REMARK 465 HIS A 108 REMARK 465 HIS A 109 REMARK 465 HIS A 110 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASN A 3 120.99 -173.34 REMARK 500 1 SER A 9 59.13 -176.35 REMARK 500 1 GLU A 14 -179.86 -64.42 REMARK 500 1 ALA A 16 76.28 58.20 REMARK 500 1 GLU A 17 95.78 -165.88 REMARK 500 1 LYS A 21 -74.30 -118.34 REMARK 500 1 GLU A 22 -69.63 -177.73 REMARK 500 1 GLU A 23 163.50 62.97 REMARK 500 1 ALA A 48 -53.61 -127.30 REMARK 500 1 SER A 63 172.38 -58.57 REMARK 500 1 SER A 66 35.40 -179.14 REMARK 500 1 PRO A 75 95.93 -69.76 REMARK 500 1 GLN A 99 144.86 -172.87 REMARK 500 2 GLU A 22 -56.02 -153.35 REMARK 500 2 THR A 47 95.33 -164.21 REMARK 500 2 ALA A 48 -54.20 -128.85 REMARK 500 2 SER A 63 172.52 -58.60 REMARK 500 2 ASN A 65 37.65 -143.92 REMARK 500 2 SER A 66 23.79 -158.40 REMARK 500 2 PRO A 75 97.54 -69.78 REMARK 500 2 GLU A 98 51.58 -95.03 REMARK 500 2 GLN A 99 71.47 56.85 REMARK 500 2 THR A 100 31.46 -170.79 REMARK 500 3 SER A 2 66.88 -153.08 REMARK 500 3 ASN A 11 92.03 57.20 REMARK 500 3 ALA A 16 69.35 -102.90 REMARK 500 3 CYS A 20 57.11 -151.22 REMARK 500 3 ALA A 48 -61.46 -152.49 REMARK 500 3 SER A 63 172.62 -58.47 REMARK 500 3 SER A 66 35.22 -174.75 REMARK 500 3 PRO A 75 90.61 -69.77 REMARK 500 3 LYS A 80 -52.16 -121.28 REMARK 500 3 GLN A 99 169.40 61.15 REMARK 500 4 SER A 2 147.65 -171.35 REMARK 500 4 ASN A 4 -73.90 -129.88 REMARK 500 4 PRO A 8 -172.69 -69.74 REMARK 500 4 SER A 9 70.70 -160.23 REMARK 500 4 ASN A 11 -44.55 -147.81 REMARK 500 4 ALA A 16 140.70 -177.93 REMARK 500 4 GLU A 17 -176.73 -170.18 REMARK 500 4 THR A 19 100.61 -160.31 REMARK 500 4 GLU A 22 -170.76 -176.82 REMARK 500 4 GLU A 23 172.34 62.14 REMARK 500 4 ALA A 48 -64.80 -138.00 REMARK 500 4 SER A 63 170.22 -58.18 REMARK 500 4 ASN A 65 54.26 -147.48 REMARK 500 4 SER A 66 33.12 -176.89 REMARK 500 4 PRO A 75 98.37 -69.77 REMARK 500 4 GLU A 78 170.59 179.35 REMARK 500 4 LYS A 80 -57.18 -120.24 REMARK 500 REMARK 500 THIS ENTRY HAS 237 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2K8H A 2 102 UNP Q57Z72 Q57Z72_9TRYP 8 108 SEQADV 2K8H MET A 1 UNP Q57Z72 EXPRESSION TAG SEQADV 2K8H LEU A 103 UNP Q57Z72 EXPRESSION TAG SEQADV 2K8H GLU A 104 UNP Q57Z72 EXPRESSION TAG SEQADV 2K8H HIS A 105 UNP Q57Z72 EXPRESSION TAG SEQADV 2K8H HIS A 106 UNP Q57Z72 EXPRESSION TAG SEQADV 2K8H HIS A 107 UNP Q57Z72 EXPRESSION TAG SEQADV 2K8H HIS A 108 UNP Q57Z72 EXPRESSION TAG SEQADV 2K8H HIS A 109 UNP Q57Z72 EXPRESSION TAG SEQADV 2K8H HIS A 110 UNP Q57Z72 EXPRESSION TAG SEQRES 1 A 110 MET SER ASN ASN GLY GLY GLU PRO SER ASN ASN GLY GLY SEQRES 2 A 110 GLU GLY ALA GLU GLY THR CYS LYS GLU GLU THR ALA LEU SEQRES 3 A 110 VAL ALA VAL LYS VAL VAL ASN ALA ASP GLY ALA GLU MET SEQRES 4 A 110 PHE PHE ARG ILE LYS SER ARG THR ALA LEU LYS LYS LEU SEQRES 5 A 110 ILE ASP THR TYR CYS LYS LYS GLN GLY ILE SER ARG ASN SEQRES 6 A 110 SER VAL ARG PHE LEU PHE ASP GLY THR PRO ILE ASP GLU SEQRES 7 A 110 THR LYS THR PRO GLU GLU LEU GLY MET GLU ASP ASP ASP SEQRES 8 A 110 VAL ILE ASP ALA MET VAL GLU GLN THR GLY GLY LEU GLU SEQRES 9 A 110 HIS HIS HIS HIS HIS HIS HELIX 1 1 ALA A 48 GLY A 61 1 14 HELIX 2 2 LYS A 80 MET A 87 1 8 SHEET 1 A 4 MET A 39 ILE A 43 0 SHEET 2 A 4 VAL A 27 ASN A 33 -1 N VAL A 29 O PHE A 41 SHEET 3 A 4 ASP A 90 MET A 96 1 O ALA A 95 N VAL A 32 SHEET 4 A 4 ARG A 68 LEU A 70 -1 N ARG A 68 O MET A 96 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1