HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 25-SEP-08 2K8Y TITLE SOLUTION NMR STRUCTURE OF CGI121 FROM METHANOCOCCUS JANNASCHII. TITLE 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM TARGET MJ0187 COMPND MOL_ID: 1; COMPND 2 MOLECULE: UNCHARACTERIZED PROTEIN MJ0187; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METHANOCALDOCOCCUS JANNASCHII; SOURCE 3 ORGANISM_COMMON: METHANOCOCCUS JANNASCHII; SOURCE 4 ORGANISM_TAXID: 2190; SOURCE 5 GENE: MJ0187; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PGEX KEYWDS REGULATORY SUBUNIT OF THE BUD32 KINASE, COMPONENT OF THE KEOPS KEYWDS 2 COMPLEX, STRUCTURAL GENOMICS, PSI-2, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM, NESG, UNKNOWN FUNCTION EXPDTA SOLUTION NMR NUMMDL 10 AUTHOR S.RUMPEL,C.FARES,D.NECULAI,C.ARROWSMITH,G.T.MONTELIONE,F.SICHERI, AUTHOR 2 NORTHEAST STRUCTURAL GENOMICS CONSORTIUM (NESG) REVDAT 5 22-MAY-24 2K8Y 1 REMARK REVDAT 4 16-MAR-22 2K8Y 1 REMARK REVDAT 3 24-FEB-09 2K8Y 1 VERSN REVDAT 2 11-NOV-08 2K8Y 1 REMARK REVDAT 1 04-NOV-08 2K8Y 0 JRNL AUTH D.Y.MAO,D.NECULAI,M.DOWNEY,S.ORLICKY,Y.Z.HAFFANI, JRNL AUTH 2 D.F.CECCARELLI,J.S.HO,R.K.SZILARD,W.ZHANG,C.S.HO,L.WAN, JRNL AUTH 3 C.FARES,S.RUMPEL,I.KURINOV,C.H.ARROWSMITH,D.DUROCHER, JRNL AUTH 4 F.SICHERI JRNL TITL ATOMIC STRUCTURE OF THE KEOPS COMPLEX: AN ANCIENT PROTEIN JRNL TITL 2 KINASE-CONTAINING MOLECULAR MACHINE. JRNL REF MOL.CELL V. 32 259 2008 JRNL REFN ISSN 1097-2765 JRNL PMID 18951093 JRNL DOI 10.1016/J.MOLCEL.2008.10.002 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA, CYANA REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH (CYANA), REMARK 3 GUNTERT, MUMENTHALER AND WUTHRICH (CYANA) REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2K8Y COMPLIES WITH FORMAT V. 3.15, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 29-SEP-08. REMARK 100 THE DEPOSITION ID IS D_1000100825. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.3 REMARK 210 IONIC STRENGTH : 0.1 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 1 MM [U-100% 13C; U-100% 15N] REMARK 210 PROTEIN, 90% H2O/10% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D CBCA(CO)NH; 3D HNCO; 3D REMARK 210 HNCACB; 3D HCCH-TOCSY; 3D REMARK 210 HBHA(CO)NH; 3D 1H-15N NOESY; 3D REMARK 210 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 10 REMARK 210 CONFORMERS, SELECTION CRITERIA : STRUCTURES WITH THE LOWEST REMARK 210 ENERGY REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ASP A 4 74.36 57.24 REMARK 500 1 ALA A 36 -72.25 -76.10 REMARK 500 1 PRO A 53 -81.68 -71.61 REMARK 500 1 ILE A 54 11.22 -150.67 REMARK 500 1 GLN A 69 96.94 57.37 REMARK 500 1 ARG A 70 -160.97 -121.18 REMARK 500 1 ILE A 114 139.88 76.97 REMARK 500 1 LYS A 127 76.09 59.05 REMARK 500 1 PHE A 131 -169.72 -107.62 REMARK 500 1 LEU A 147 18.79 81.59 REMARK 500 1 LYS A 148 128.20 171.91 REMARK 500 1 LYS A 149 35.83 -77.46 REMARK 500 2 ALA A 36 -84.61 59.79 REMARK 500 2 PRO A 53 177.43 -57.18 REMARK 500 2 ILE A 114 133.57 78.83 REMARK 500 2 LYS A 127 72.38 63.78 REMARK 500 3 ASP A 4 94.52 64.28 REMARK 500 3 GLN A 69 97.50 57.78 REMARK 500 3 ARG A 70 -158.11 -137.84 REMARK 500 3 ILE A 114 131.46 78.71 REMARK 500 3 LYS A 127 82.53 66.13 REMARK 500 3 LEU A 144 3.97 -66.89 REMARK 500 3 LEU A 147 31.74 -85.76 REMARK 500 3 LYS A 149 76.18 66.99 REMARK 500 4 ALA A 36 -84.99 58.29 REMARK 500 4 PRO A 53 -115.26 -90.57 REMARK 500 4 ARG A 70 -10.61 66.58 REMARK 500 4 ILE A 114 127.22 73.07 REMARK 500 4 LYS A 127 76.32 63.60 REMARK 500 4 ARG A 129 -90.82 -61.72 REMARK 500 4 PHE A 131 101.21 67.00 REMARK 500 4 LEU A 147 67.30 81.36 REMARK 500 5 ALA A 2 118.23 -162.49 REMARK 500 5 ASP A 4 91.68 60.10 REMARK 500 5 PRO A 53 -142.94 -85.19 REMARK 500 5 ILE A 114 123.89 93.57 REMARK 500 5 LYS A 127 79.11 57.88 REMARK 500 6 MET A 3 12.79 115.29 REMARK 500 6 ASP A 4 68.24 -166.01 REMARK 500 6 ILE A 16 92.41 -69.02 REMARK 500 6 PRO A 53 -119.10 -68.41 REMARK 500 6 ILE A 114 127.50 78.63 REMARK 500 6 LYS A 127 69.55 61.53 REMARK 500 6 ARG A 129 39.00 -86.35 REMARK 500 7 PRO A 53 -78.98 -87.73 REMARK 500 7 ILE A 114 138.21 77.74 REMARK 500 7 LYS A 127 75.86 63.84 REMARK 500 7 LEU A 147 -60.37 -170.73 REMARK 500 7 LYS A 148 -145.00 14.48 REMARK 500 8 PRO A 53 -78.34 -57.23 REMARK 500 REMARK 500 THIS ENTRY HAS 70 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 LYS A 148 LYS A 149 7 149.31 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 4 ARG A 70 0.09 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1ZD0 RELATED DB: PDB REMARK 900 RELATED ID: MJT1 RELATED DB: TARGETDB DBREF 2K8Y A 6 150 UNP Q57646 Y187_METJA 1 145 SEQADV 2K8Y GLY A 1 UNP Q57646 EXPRESSION TAG SEQADV 2K8Y ALA A 2 UNP Q57646 EXPRESSION TAG SEQADV 2K8Y MET A 3 UNP Q57646 EXPRESSION TAG SEQADV 2K8Y ASP A 4 UNP Q57646 EXPRESSION TAG SEQADV 2K8Y PRO A 5 UNP Q57646 EXPRESSION TAG SEQRES 1 A 150 GLY ALA MET ASP PRO MET ILE ILE ARG GLY ILE ARG GLY SEQRES 2 A 150 ALA ARG ILE ASN ASN GLU ILE PHE ASN LEU GLY LEU LYS SEQRES 3 A 150 PHE GLN ILE LEU ASN ALA ASP VAL VAL ALA THR LYS LYS SEQRES 4 A 150 HIS VAL LEU HIS ALA ILE ASN GLN ALA LYS THR LYS LYS SEQRES 5 A 150 PRO ILE ALA LYS SER PHE TRP MET GLU ILE LEU VAL ARG SEQRES 6 A 150 ALA SER GLY GLN ARG GLN ILE HIS GLU ALA ILE LYS ILE SEQRES 7 A 150 ILE GLY ALA LYS ASP GLY ASN VAL CYS LEU ILE CYS GLU SEQRES 8 A 150 ASP GLU GLU THR PHE ARG LYS ILE TYR GLU LEU ILE GLY SEQRES 9 A 150 GLY GLU ILE ASP ASP SER VAL LEU GLU ILE ASN GLU ASP SEQRES 10 A 150 LYS GLU ARG LEU ILE ARG GLU ILE PHE LYS ILE ARG GLY SEQRES 11 A 150 PHE GLY ASN VAL VAL GLU ARG VAL LEU GLU LYS ILE ALA SEQRES 12 A 150 LEU ILE GLU LEU LYS LYS GLU HELIX 1 1 ASN A 18 LEU A 23 1 6 HELIX 2 2 THR A 37 LYS A 51 1 15 HELIX 3 3 SER A 57 ALA A 66 1 10 HELIX 4 4 GLN A 71 GLY A 80 1 10 HELIX 5 5 ASP A 92 GLY A 104 1 13 HELIX 6 6 ASP A 109 GLU A 113 5 5 HELIX 7 7 ASN A 115 PHE A 126 1 12 HELIX 8 8 ASN A 133 GLU A 146 1 14 SHEET 1 A 4 PHE A 27 ASN A 31 0 SHEET 2 A 4 GLY A 84 CYS A 90 -1 O CYS A 87 N LEU A 30 SHEET 3 A 4 ILE A 7 ALA A 14 -1 N ARG A 9 O LEU A 88 SHEET 4 A 4 GLU A 106 ILE A 107 -1 O GLU A 106 N ARG A 12 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1