data_2KAD # _entry.id 2KAD # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.350 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2KAD pdb_00002kad 10.2210/pdb2kad/pdb RCSB RCSB100876 ? ? WWPDB D_1000100876 ? ? # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KAD _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-11-04 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hong, M.' 1 'Cady, S.D.' 2 'Mishanina, T.V.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary ;Structure of amantadine-bound M2 transmembrane peptide of influenza A in lipid bilayers from magic-angle-spinning solid-state NMR: the role of Ser31 in amantadine binding. ; J.Mol.Biol. 385 1127 1141 2009 JMOBAK UK 0022-2836 0070 ? 19061899 10.1016/j.jmb.2008.11.022 1 'Amantadine-induced conformational and dynamical changes of the influenza M2 transmembrane proton channel.' Proc.Natl.Acad.Sci.USA 105 1483 1488 2008 PNASA6 US 0027-8424 0040 ? 18230730 10.1073/pnas.0711500105 2 'Side-chain conformation of the M2 transmembrane peptide proton channel of influenza a virus from 19F solid-state NMR.' J.Phys.Chem.B 111 10825 10832 2007 JPCBFK US 1089-5647 1278 ? 17705425 10.1021/jp073823k 3 ;Determination of the oligomeric number and intermolecular distances of membrane protein assemblies by anisotropic 1H-driven spin diffusion NMR spectroscopy. ; J.Am.Chem.Soc. 128 7242 7251 2006 JACSAT US 0002-7863 0004 ? 16734478 10.1021/ja0603406 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Cady, S.D.' 1 ? primary 'Mishanina, T.V.' 2 ? primary 'Hong, M.' 3 ? 1 'Cady, S.D.' 4 ? 1 'Hong, M.' 5 ? 2 'Luo, W.' 6 ? 2 'Mani, R.' 7 ? 2 'Hong, M.' 8 ? 3 'Luo, W.' 9 ? 3 'Hong, M.' 10 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer syn 'Transmembrane peptide of Matrix protein 2' 2688.215 4 ? ? 'Transmembrane peptide of influenza A M2 protein: UNP residues 22-46' ? 2 non-polymer syn '(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]decan-1-amine' 151.249 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Proton channel protein M2' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code SSDPLVVAASIIGILHLIAWILDRL _entity_poly.pdbx_seq_one_letter_code_can SSDPLVVAASIIGILHLIAWILDRL _entity_poly.pdbx_strand_id A,B,C,D _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 SER n 1 3 ASP n 1 4 PRO n 1 5 LEU n 1 6 VAL n 1 7 VAL n 1 8 ALA n 1 9 ALA n 1 10 SER n 1 11 ILE n 1 12 ILE n 1 13 GLY n 1 14 ILE n 1 15 LEU n 1 16 HIS n 1 17 LEU n 1 18 ILE n 1 19 ALA n 1 20 TRP n 1 21 ILE n 1 22 LEU n 1 23 ASP n 1 24 ARG n 1 25 LEU n # _pdbx_entity_src_syn.entity_id 1 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific ? _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id ? _pdbx_entity_src_syn.details 'Solid phase peptide synthesis' # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code M2_I97A1 _struct_ref.pdbx_db_accession O70632 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code SSDPLVVAASIIGILHLILWILDRL _struct_ref.pdbx_align_begin 22 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2KAD A 1 ? 25 ? O70632 22 ? 46 ? 22 46 2 1 2KAD B 1 ? 25 ? O70632 22 ? 46 ? 22 46 3 1 2KAD C 1 ? 25 ? O70632 22 ? 46 ? 22 46 4 1 2KAD D 1 ? 25 ? O70632 22 ? 46 ? 22 46 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2KAD ALA A 19 ? UNP O70632 LEU 40 'engineered mutation' 40 1 2 2KAD ALA B 19 ? UNP O70632 LEU 40 'engineered mutation' 40 2 3 2KAD ALA C 19 ? UNP O70632 LEU 40 'engineered mutation' 40 3 4 2KAD ALA D 19 ? UNP O70632 LEU 40 'engineered mutation' 40 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 308 non-polymer . '(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]decan-1-amine' Amantadine 'C10 H17 N' 151.249 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 13C-13C DQF_COSY' 1 2 1 '2D 15N-13C HETCOR' 1 3 1 '2D DARR' 1 4 1 '2D INADEQUATE' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 7.5 _pdbx_nmr_exptl_sample_conditions.pressure ambient _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 243 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents ;4-6 mg/mL Selective U-13C, 15N labeled M2 Transmembrane Peptide, 15-25 mg/mL DLPC, 10 mM sodium phosphate, 0.1 mM sodium azide, 1 mM EDTA, 20-25 mL H2O, Solid-State NMR: Hydrated DLPC gel, approx. 50% H2O by weight. DLPC:M2TMP:Amantadine 15:1:8 ; _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system 'Solid-State NMR: Hydrated DLPC gel, approx. 50% H2O by weight. DLPC:M2TMP:Amantadine 15:1:8' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Bruker AVANCE 1 'Bruker AVANCE' 400 Bruker DRX 2 'Bruker DRX' # _pdbx_nmr_refine.entry_id 2KAD _pdbx_nmr_refine.method 'torsion angle dynamics' _pdbx_nmr_refine.details TALOS _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the least restraint violations' _pdbx_nmr_ensemble.conformers_calculated_total_number 1 _pdbx_nmr_ensemble.conformers_submitted_total_number 1 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KAD _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KAD _pdbx_nmr_representative.selection_criteria 'fewest violations' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Bruker Biospin' collection TopSpin 1.3 1 'Accelrys Software Inc.' 'structure solution' 'Insight II' 2005 2 'Accelrys Software Inc.' refinement 'Insight II' 2005 3 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details '13C and 15N chemical shifts of DLPC-bound M2(22-46) measured by solid-state NMR.' _exptl.entry_id 2KAD _exptl.method 'SOLID-STATE NMR' _exptl.method_details ? # _struct.entry_id 2KAD _struct.title 'Magic-Angle-Spinning Solid-State NMR Structure of Influenza A M2 Transmembrane Domain' _struct.pdbx_model_details '13C and 15N chemical shifts of DLPC-bound M2(22-46) measured by solid-state NMR.' _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KAD _struct_keywords.pdbx_keywords 'MEMBRANE PROTEIN' _struct_keywords.text ;transmembrane helix, proton channel, lipid bilayers, influenza A, Alternative splicing, Hydrogen ion transport, Ion transport, Ionic channel, Lipoprotein, Palmitate, Phosphoprotein, Signal-anchor, Transport, Virion, MEMBRANE PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 1 ? E N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 1 ? LEU A 25 ? SER A 22 LEU A 46 1 ? 25 HELX_P HELX_P2 2 SER B 1 ? LEU B 25 ? SER B 22 LEU B 46 1 ? 25 HELX_P HELX_P3 3 SER C 1 ? LEU C 25 ? SER C 22 LEU C 46 1 ? 25 HELX_P HELX_P4 4 SER D 1 ? LEU D 25 ? SER D 22 LEU D 46 1 ? 25 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id 308 _struct_site.pdbx_auth_seq_id 1 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 5 _struct_site.details 'BINDING SITE FOR RESIDUE 308 A 1' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 ALA A 9 ? ALA A 30 . ? 1_555 ? 2 AC1 5 SER A 10 ? SER A 31 . ? 1_555 ? 3 AC1 5 GLY A 13 ? GLY A 34 . ? 1_555 ? 4 AC1 5 ALA B 9 ? ALA B 30 . ? 1_555 ? 5 AC1 5 SER B 10 ? SER B 31 . ? 1_555 ? # _atom_sites.entry_id 2KAD _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 22 22 SER SER A . n A 1 2 SER 2 23 23 SER SER A . n A 1 3 ASP 3 24 24 ASP ASP A . n A 1 4 PRO 4 25 25 PRO PRO A . n A 1 5 LEU 5 26 26 LEU LEU A . n A 1 6 VAL 6 27 27 VAL VAL A . n A 1 7 VAL 7 28 28 VAL VAL A . n A 1 8 ALA 8 29 29 ALA ALA A . n A 1 9 ALA 9 30 30 ALA ALA A . n A 1 10 SER 10 31 31 SER SER A . n A 1 11 ILE 11 32 32 ILE ILE A . n A 1 12 ILE 12 33 33 ILE ILE A . n A 1 13 GLY 13 34 34 GLY GLY A . n A 1 14 ILE 14 35 35 ILE ILE A . n A 1 15 LEU 15 36 36 LEU LEU A . n A 1 16 HIS 16 37 37 HIS HIS A . n A 1 17 LEU 17 38 38 LEU LEU A . n A 1 18 ILE 18 39 39 ILE ILE A . n A 1 19 ALA 19 40 40 ALA ALA A . n A 1 20 TRP 20 41 41 TRP TRP A . n A 1 21 ILE 21 42 42 ILE ILE A . n A 1 22 LEU 22 43 43 LEU LEU A . n A 1 23 ASP 23 44 44 ASP ASP A . n A 1 24 ARG 24 45 45 ARG ARG A . n A 1 25 LEU 25 46 46 LEU LEU A . n B 1 1 SER 1 22 22 SER SER B . n B 1 2 SER 2 23 23 SER SER B . n B 1 3 ASP 3 24 24 ASP ASP B . n B 1 4 PRO 4 25 25 PRO PRO B . n B 1 5 LEU 5 26 26 LEU LEU B . n B 1 6 VAL 6 27 27 VAL VAL B . n B 1 7 VAL 7 28 28 VAL VAL B . n B 1 8 ALA 8 29 29 ALA ALA B . n B 1 9 ALA 9 30 30 ALA ALA B . n B 1 10 SER 10 31 31 SER SER B . n B 1 11 ILE 11 32 32 ILE ILE B . n B 1 12 ILE 12 33 33 ILE ILE B . n B 1 13 GLY 13 34 34 GLY GLY B . n B 1 14 ILE 14 35 35 ILE ILE B . n B 1 15 LEU 15 36 36 LEU LEU B . n B 1 16 HIS 16 37 37 HIS HIS B . n B 1 17 LEU 17 38 38 LEU LEU B . n B 1 18 ILE 18 39 39 ILE ILE B . n B 1 19 ALA 19 40 40 ALA ALA B . n B 1 20 TRP 20 41 41 TRP TRP B . n B 1 21 ILE 21 42 42 ILE ILE B . n B 1 22 LEU 22 43 43 LEU LEU B . n B 1 23 ASP 23 44 44 ASP ASP B . n B 1 24 ARG 24 45 45 ARG ARG B . n B 1 25 LEU 25 46 46 LEU LEU B . n C 1 1 SER 1 22 22 SER SER C . n C 1 2 SER 2 23 23 SER SER C . n C 1 3 ASP 3 24 24 ASP ASP C . n C 1 4 PRO 4 25 25 PRO PRO C . n C 1 5 LEU 5 26 26 LEU LEU C . n C 1 6 VAL 6 27 27 VAL VAL C . n C 1 7 VAL 7 28 28 VAL VAL C . n C 1 8 ALA 8 29 29 ALA ALA C . n C 1 9 ALA 9 30 30 ALA ALA C . n C 1 10 SER 10 31 31 SER SER C . n C 1 11 ILE 11 32 32 ILE ILE C . n C 1 12 ILE 12 33 33 ILE ILE C . n C 1 13 GLY 13 34 34 GLY GLY C . n C 1 14 ILE 14 35 35 ILE ILE C . n C 1 15 LEU 15 36 36 LEU LEU C . n C 1 16 HIS 16 37 37 HIS HIS C . n C 1 17 LEU 17 38 38 LEU LEU C . n C 1 18 ILE 18 39 39 ILE ILE C . n C 1 19 ALA 19 40 40 ALA ALA C . n C 1 20 TRP 20 41 41 TRP TRP C . n C 1 21 ILE 21 42 42 ILE ILE C . n C 1 22 LEU 22 43 43 LEU LEU C . n C 1 23 ASP 23 44 44 ASP ASP C . n C 1 24 ARG 24 45 45 ARG ARG C . n C 1 25 LEU 25 46 46 LEU LEU C . n D 1 1 SER 1 22 22 SER SER D . n D 1 2 SER 2 23 23 SER SER D . n D 1 3 ASP 3 24 24 ASP ASP D . n D 1 4 PRO 4 25 25 PRO PRO D . n D 1 5 LEU 5 26 26 LEU LEU D . n D 1 6 VAL 6 27 27 VAL VAL D . n D 1 7 VAL 7 28 28 VAL VAL D . n D 1 8 ALA 8 29 29 ALA ALA D . n D 1 9 ALA 9 30 30 ALA ALA D . n D 1 10 SER 10 31 31 SER SER D . n D 1 11 ILE 11 32 32 ILE ILE D . n D 1 12 ILE 12 33 33 ILE ILE D . n D 1 13 GLY 13 34 34 GLY GLY D . n D 1 14 ILE 14 35 35 ILE ILE D . n D 1 15 LEU 15 36 36 LEU LEU D . n D 1 16 HIS 16 37 37 HIS HIS D . n D 1 17 LEU 17 38 38 LEU LEU D . n D 1 18 ILE 18 39 39 ILE ILE D . n D 1 19 ALA 19 40 40 ALA ALA D . n D 1 20 TRP 20 41 41 TRP TRP D . n D 1 21 ILE 21 42 42 ILE ILE D . n D 1 22 LEU 22 43 43 LEU LEU D . n D 1 23 ASP 23 44 44 ASP ASP D . n D 1 24 ARG 24 45 45 ARG ARG D . n D 1 25 LEU 25 46 46 LEU LEU D . n # _pdbx_nonpoly_scheme.asym_id E _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id 308 _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 1 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id 308 _pdbx_nonpoly_scheme.auth_mon_id 308 _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation ? _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2008-11-18 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2021-10-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_nmr_software 3 3 'Structure model' pdbx_nmr_spectrometer 4 3 'Structure model' pdbx_struct_assembly 5 3 'Structure model' pdbx_struct_oper_list 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_pdbx_nmr_software.name' 4 3 'Structure model' '_pdbx_nmr_spectrometer.model' 5 3 'Structure model' '_struct_ref_seq_dif.details' 6 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_range _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'M2 Transmembrane Peptide' ? 4-6 mg/mL 'Selective U-13C, 15N labeled' 1 DLPC ? 15-25 mg/mL ? 1 'sodium phosphate' 10 ? mM ? 1 'sodium azide' 0.1 ? mM ? 1 EDTA 1 ? mM ? 1 H2O ? 20-25 mg/mL ? 1 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 HB1 B ALA 30 ? ? HG13 D ILE 35 ? ? 0.89 2 1 HG13 A ILE 35 ? ? HB1 D ALA 30 ? ? 0.93 3 1 HG13 B ILE 35 ? ? HB1 C ALA 30 ? ? 0.95 4 1 HB1 A ALA 30 ? ? HG13 C ILE 35 ? ? 0.99 5 1 O A ALA 30 ? ? HD13 C ILE 35 ? ? 1.42 6 1 HD13 A ILE 35 ? ? O D ALA 30 ? ? 1.43 7 1 O B ALA 30 ? ? HD12 D ILE 35 ? ? 1.47 8 1 HD13 B ILE 35 ? ? O C ALA 30 ? ? 1.49 9 1 HD12 A ILE 35 ? ? O D ALA 30 ? ? 1.49 10 1 HD12 B ILE 35 ? ? O C ALA 30 ? ? 1.50 11 1 O B ALA 30 ? ? HD13 D ILE 35 ? ? 1.50 12 1 O A ALA 30 ? ? HD12 C ILE 35 ? ? 1.52 13 1 HE2 A HIS 37 ? ? CE2 C TRP 41 ? ? 1.55 14 1 CE2 B TRP 41 ? ? HE2 C HIS 37 ? ? 1.55 15 1 HD21 A LEU 38 ? ? ND1 D HIS 37 ? ? 1.60 16 1 CD1 A ILE 35 ? ? O D ALA 30 ? ? 1.72 17 1 O A ALA 30 ? ? CD1 C ILE 35 ? ? 1.73 18 1 O B ALA 30 ? ? CD1 D ILE 35 ? ? 1.73 19 1 CD1 B ILE 35 ? ? O C ALA 30 ? ? 1.74 20 1 CD2 B TRP 41 ? ? NE2 C HIS 37 ? ? 1.95 21 1 NE2 A HIS 37 ? ? CD2 C TRP 41 ? ? 1.96 22 1 NE2 B HIS 37 ? ? CD2 D TRP 41 ? ? 2.04 23 1 CD2 A TRP 41 ? ? NE2 D HIS 37 ? ? 2.05 24 1 CD2 A HIS 37 ? ? CZ3 C TRP 41 ? ? 2.11 25 1 CZ3 B TRP 41 ? ? CD2 C HIS 37 ? ? 2.15 26 1 CZ3 A TRP 41 ? ? CD2 D HIS 37 ? ? 2.19 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 C A LEU 46 ? ? OXT A LEU 46 ? ? 1.090 1.229 -0.139 0.019 N 2 1 C B LEU 46 ? ? OXT B LEU 46 ? ? 1.090 1.229 -0.139 0.019 N 3 1 C C LEU 46 ? ? OXT C LEU 46 ? ? 1.092 1.229 -0.137 0.019 N 4 1 C D LEU 46 ? ? OXT D LEU 46 ? ? 1.089 1.229 -0.140 0.019 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB A ASP 24 ? ? CG A ASP 24 ? ? OD1 A ASP 24 ? ? 125.06 118.30 6.76 0.90 N 2 1 CB A ASP 44 ? ? CG A ASP 44 ? ? OD1 A ASP 44 ? ? 125.91 118.30 7.61 0.90 N 3 1 CB A ASP 44 ? ? CG A ASP 44 ? ? OD2 A ASP 44 ? ? 111.70 118.30 -6.60 0.90 N 4 1 NE A ARG 45 ? ? CZ A ARG 45 ? ? NH2 A ARG 45 ? ? 117.14 120.30 -3.16 0.50 N 5 1 CB B ASP 24 ? ? CG B ASP 24 ? ? OD1 B ASP 24 ? ? 124.98 118.30 6.68 0.90 N 6 1 CB B ASP 44 ? ? CG B ASP 44 ? ? OD1 B ASP 44 ? ? 125.89 118.30 7.59 0.90 N 7 1 CB B ASP 44 ? ? CG B ASP 44 ? ? OD2 B ASP 44 ? ? 111.69 118.30 -6.61 0.90 N 8 1 NE B ARG 45 ? ? CZ B ARG 45 ? ? NH2 B ARG 45 ? ? 117.10 120.30 -3.20 0.50 N 9 1 CB C ASP 24 ? ? CG C ASP 24 ? ? OD1 C ASP 24 ? ? 125.04 118.30 6.74 0.90 N 10 1 CB C ASP 44 ? ? CG C ASP 44 ? ? OD1 C ASP 44 ? ? 125.85 118.30 7.55 0.90 N 11 1 CB C ASP 44 ? ? CG C ASP 44 ? ? OD2 C ASP 44 ? ? 111.77 118.30 -6.53 0.90 N 12 1 NE C ARG 45 ? ? CZ C ARG 45 ? ? NH2 C ARG 45 ? ? 116.99 120.30 -3.31 0.50 N 13 1 CB D ASP 24 ? ? CG D ASP 24 ? ? OD1 D ASP 24 ? ? 124.99 118.30 6.69 0.90 N 14 1 CB D ASP 44 ? ? CG D ASP 44 ? ? OD1 D ASP 44 ? ? 125.83 118.30 7.53 0.90 N 15 1 CB D ASP 44 ? ? CG D ASP 44 ? ? OD2 D ASP 44 ? ? 111.74 118.30 -6.56 0.90 N 16 1 NE D ARG 45 ? ? CZ D ARG 45 ? ? NH2 D ARG 45 ? ? 117.07 120.30 -3.23 0.50 N # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name '(3S,5S,7S)-tricyclo[3.3.1.1~3,7~]decan-1-amine' _pdbx_entity_nonpoly.comp_id 308 #