data_2KAE # _entry.id 2KAE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.356 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 2KAE pdb_00002kae 10.2210/pdb2kae/pdb RCSB RCSB100877 ? ? WWPDB D_1000100877 ? ? # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KAE _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-11-04 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.status_code_nmr_data ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lowry, J.A.' 1 'Gamsjaeger, R.' 2 'Thong, S.' 3 'Hung, W.' 4 'Kwan, A.H.' 5 'Broitman-Maduro, G.' 6 'Matthews, J.M.' 7 'Maduro, M.' 8 'Mackay, J.P.' 9 # _citation.id primary _citation.title 'Structural Analysis of MED-1 Reveals Unexpected Diversity in the Mechanism of DNA Recognition by GATA-type Zinc Finger Domains.' _citation.journal_abbrev J.Biol.Chem. _citation.journal_volume 284 _citation.page_first 5827 _citation.page_last 5835 _citation.year 2009 _citation.journal_id_ASTM JBCHA3 _citation.country US _citation.journal_id_ISSN 0021-9258 _citation.journal_id_CSD 0071 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19095651 _citation.pdbx_database_id_DOI 10.1074/jbc.M808712200 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Lowry, J.A.' 1 ? primary 'Gamsjaeger, R.' 2 ? primary 'Thong, S.Y.' 3 ? primary 'Hung, W.' 4 ? primary 'Kwan, A.H.' 5 ? primary 'Broitman-Maduro, G.' 6 ? primary 'Matthews, J.M.' 7 ? primary 'Maduro, M.' 8 ? primary 'Mackay, J.P.' 9 ? # _cell.entry_id 2KAE _cell.length_a 1.000 _cell.length_b 1.000 _cell.length_c 1.000 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 1 _cell.pdbx_unique_axis ? # _symmetry.entry_id 2KAE _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'GATA-type transcription factor' 8364.610 1 ? ? 'UNP residues 111-166' ? 2 polymer syn "5'-D(*DCP*DGP*DGP*DAP*DAP*DAP*DAP*DGP*DTP*DAP*DTP*DAP*DCP*DTP*DTP*DTP*DTP*DCP*DCP*DG)-3'" 6132.990 2 ? ? ? ? 3 non-polymer syn 'ZINC ION' 65.409 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no GSHMNKKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYNKTRPVTAVNKYQKRKLKVQETNGVDSF GSHMNKKSFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYNKTRPVTAVNKYQKRKLKVQETNGVDSF A ? 2 polydeoxyribonucleotide no no '(DC)(DG)(DG)(DA)(DA)(DA)(DA)(DG)(DT)(DA)(DT)(DA)(DC)(DT)(DT)(DT)(DT)(DC)(DC)(DG)' CGGAAAAGTATACTTTTCCG C,B ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 ASN n 1 6 LYS n 1 7 LYS n 1 8 SER n 1 9 PHE n 1 10 GLN n 1 11 CYS n 1 12 SER n 1 13 ASN n 1 14 CYS n 1 15 SER n 1 16 VAL n 1 17 THR n 1 18 GLU n 1 19 THR n 1 20 ILE n 1 21 ARG n 1 22 TRP n 1 23 ARG n 1 24 ASN n 1 25 ILE n 1 26 ARG n 1 27 SER n 1 28 LYS n 1 29 GLU n 1 30 GLY n 1 31 ILE n 1 32 GLN n 1 33 CYS n 1 34 ASN n 1 35 ALA n 1 36 CYS n 1 37 PHE n 1 38 ILE n 1 39 TYR n 1 40 GLN n 1 41 ARG n 1 42 LYS n 1 43 TYR n 1 44 ASN n 1 45 LYS n 1 46 THR n 1 47 ARG n 1 48 PRO n 1 49 VAL n 1 50 THR n 1 51 ALA n 1 52 VAL n 1 53 ASN n 1 54 LYS n 1 55 TYR n 1 56 GLN n 1 57 LYS n 1 58 ARG n 1 59 LYS n 1 60 LEU n 1 61 LYS n 1 62 VAL n 1 63 GLN n 1 64 GLU n 1 65 THR n 1 66 ASN n 1 67 GLY n 1 68 VAL n 1 69 ASP n 1 70 SER n 1 71 PHE n 2 1 DC n 2 2 DG n 2 3 DG n 2 4 DA n 2 5 DA n 2 6 DA n 2 7 DA n 2 8 DG n 2 9 DT n 2 10 DA n 2 11 DT n 2 12 DA n 2 13 DC n 2 14 DT n 2 15 DT n 2 16 DT n 2 17 DT n 2 18 DC n 2 19 DC n 2 20 DG n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name nematode _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'med-1, T24D3.1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Caenorhabditis elegans' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 6239 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain Rosetta2 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector pET15b _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _struct_ref.entity_id _struct_ref.pdbx_db_accession _struct_ref.db_code _struct_ref.db_name _struct_ref.id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 Q9GSP3 Q9GSP3_CAEEL UNP 1 111 SFQCSNCSVTETIRWRNIRSKEGIQCNACFIYQRKYNKTRPVTAVNKYQKRKLKVQ ? 2 2KAE 2KAE PDB 2 1 CGGAAAAGTATACTTTTCCG ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 2KAE A 8 ? 63 ? Q9GSP3 111 ? 166 ? 111 166 2 2 2KAE C 1 ? 20 ? 2KAE 21 ? 40 ? 21 40 3 2 2KAE B 1 ? 20 ? 2KAE 1 ? 20 ? 1 20 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 2KAE GLY A 1 ? UNP Q9GSP3 ? ? 'expression tag' 104 1 1 2KAE SER A 2 ? UNP Q9GSP3 ? ? 'expression tag' 105 2 1 2KAE HIS A 3 ? UNP Q9GSP3 ? ? 'expression tag' 106 3 1 2KAE MET A 4 ? UNP Q9GSP3 ? ? 'expression tag' 107 4 1 2KAE ASN A 5 ? UNP Q9GSP3 ? ? 'expression tag' 108 5 1 2KAE LYS A 6 ? UNP Q9GSP3 ? ? 'expression tag' 109 6 1 2KAE LYS A 7 ? UNP Q9GSP3 ? ? 'expression tag' 110 7 1 2KAE GLU A 64 ? UNP Q9GSP3 ? ? 'expression tag' 167 8 1 2KAE THR A 65 ? UNP Q9GSP3 ? ? 'expression tag' 168 9 1 2KAE ASN A 66 ? UNP Q9GSP3 ? ? 'expression tag' 169 10 1 2KAE GLY A 67 ? UNP Q9GSP3 ? ? 'expression tag' 170 11 1 2KAE VAL A 68 ? UNP Q9GSP3 ? ? 'expression tag' 171 12 1 2KAE ASP A 69 ? UNP Q9GSP3 ? ? 'expression tag' 172 13 1 2KAE SER A 70 ? UNP Q9GSP3 ? ? 'expression tag' 173 14 1 2KAE PHE A 71 ? UNP Q9GSP3 ? ? 'expression tag' 174 15 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 '2D 1H-15N HSQC' 1 2 1 '3D CBCA(CO)NH' 1 3 1 '3D HNCO' 1 4 1 '3D HNCA' 1 5 1 '3D HNCACB' 1 6 1 '3D HBHA(CO)NH' 1 7 1 '3D HCCH-TOCSY' 1 8 1 '3D HNHA' 1 9 1 '3D 1H-15N NOESY' 1 10 1 '2D 1H-1H NOESY' 1 11 2 '2D 1H-15N HSQC' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength ? _pdbx_nmr_exptl_sample_conditions.pH 6.5 _pdbx_nmr_exptl_sample_conditions.pressure ? _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 298 _pdbx_nmr_exptl_sample_conditions.temperature_units K # loop_ _pdbx_nmr_sample_details.contents _pdbx_nmr_sample_details.solution_id _pdbx_nmr_sample_details.solvent_system '40 mM sodium chloride, 20 mM potassium phosphate, 1 mM DTT, 90% H2O/10% D2O' 1 '90% H2O/10% D2O' '40 mM sodium chloride, 20 mM potassium phosphate, 1 mM DTT, 6 mg/mL Pf1 phage, 90% H2O/10% D2O' 2 '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Bruker DRX 1 'Bruker DRX' 800 Bruker DRX 2 'Bruker DRX' # _pdbx_nmr_refine.entry_id 2KAE _pdbx_nmr_refine.method 'simulated annealing' _pdbx_nmr_refine.details HADDOCK _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'structures with the lowest energy' _pdbx_nmr_ensemble.conformers_calculated_total_number 10 _pdbx_nmr_ensemble.conformers_submitted_total_number 10 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KAE _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KAE _pdbx_nmr_representative.selection_criteria 'lowest energy' # _pdbx_nmr_software.authors 'Brunger A. T. et.al.' _pdbx_nmr_software.classification refinement _pdbx_nmr_software.name CNS _pdbx_nmr_software.version ? _pdbx_nmr_software.ordinal 1 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2KAE _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KAE _struct.title 'data-driven model of MED1:DNA complex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KAE _struct_keywords.pdbx_keywords TRANSCRIPTION/DNA _struct_keywords.text 'zinc finger, GATA-type, DNA, transcription factor, Metal-binding, Zinc, Zinc-finger, TRANSCRIPTION-DNA COMPLEX' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 34 ? LYS A 45 ? ASN A 137 LYS A 148 1 ? 12 HELX_P HELX_P2 2 VAL A 49 ? LEU A 60 ? VAL A 152 LEU A 163 1 ? 12 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role metalc1 metalc ? ? A CYS 11 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 114 A ZN 175 1_555 ? ? ? ? ? ? ? 2.372 ? ? metalc2 metalc ? ? A CYS 14 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 117 A ZN 175 1_555 ? ? ? ? ? ? ? 2.213 ? ? metalc3 metalc ? ? A CYS 33 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 136 A ZN 175 1_555 ? ? ? ? ? ? ? 2.169 ? ? metalc4 metalc ? ? A CYS 36 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 139 A ZN 175 1_555 ? ? ? ? ? ? ? 2.241 ? ? hydrog1 hydrog ? ? B DC 1 N3 ? ? ? 1_555 C DG 20 N1 ? ? C DC 21 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? B DC 1 N4 ? ? ? 1_555 C DG 20 O6 ? ? C DC 21 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? B DC 1 O2 ? ? ? 1_555 C DG 20 N2 ? ? C DC 21 B DG 20 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? B DG 2 N1 ? ? ? 1_555 C DC 19 N3 ? ? C DG 22 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? B DG 2 N2 ? ? ? 1_555 C DC 19 O2 ? ? C DG 22 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? B DG 2 O6 ? ? ? 1_555 C DC 19 N4 ? ? C DG 22 B DC 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? B DG 3 N1 ? ? ? 1_555 C DC 18 N3 ? ? C DG 23 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? B DG 3 N2 ? ? ? 1_555 C DC 18 O2 ? ? C DG 23 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? B DG 3 O6 ? ? ? 1_555 C DC 18 N4 ? ? C DG 23 B DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? B DA 4 N1 ? ? ? 1_555 C DT 17 N3 ? ? C DA 24 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? B DA 4 N6 ? ? ? 1_555 C DT 17 O4 ? ? C DA 24 B DT 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? B DA 5 N1 ? ? ? 1_555 C DT 16 N3 ? ? C DA 25 B DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? B DA 5 N6 ? ? ? 1_555 C DT 16 O4 ? ? C DA 25 B DT 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? B DA 6 N1 ? ? ? 1_555 C DT 15 N3 ? ? C DA 26 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? B DA 6 N6 ? ? ? 1_555 C DT 15 O4 ? ? C DA 26 B DT 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? B DA 7 N1 ? ? ? 1_555 C DT 14 N3 ? ? C DA 27 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog17 hydrog ? ? B DA 7 N6 ? ? ? 1_555 C DT 14 O4 ? ? C DA 27 B DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? B DG 8 N1 ? ? ? 1_555 C DC 13 N3 ? ? C DG 28 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? B DG 8 N2 ? ? ? 1_555 C DC 13 O2 ? ? C DG 28 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? B DG 8 O6 ? ? ? 1_555 C DC 13 N4 ? ? C DG 28 B DC 13 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? B DT 9 N3 ? ? ? 1_555 C DA 12 N1 ? ? C DT 29 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? B DT 9 O4 ? ? ? 1_555 C DA 12 N6 ? ? C DT 29 B DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? B DA 10 N1 ? ? ? 1_555 C DT 11 N3 ? ? C DA 30 B DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? B DA 10 N6 ? ? ? 1_555 C DT 11 O4 ? ? C DA 30 B DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? B DT 11 N3 ? ? ? 1_555 C DA 10 N1 ? ? C DT 31 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? B DT 11 O4 ? ? ? 1_555 C DA 10 N6 ? ? C DT 31 B DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? B DA 12 N1 ? ? ? 1_555 C DT 9 N3 ? ? C DA 32 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? B DA 12 N6 ? ? ? 1_555 C DT 9 O4 ? ? C DA 32 B DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? B DC 13 N3 ? ? ? 1_555 C DG 8 N1 ? ? C DC 33 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? B DC 13 N4 ? ? ? 1_555 C DG 8 O6 ? ? C DC 33 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? B DC 13 O2 ? ? ? 1_555 C DG 8 N2 ? ? C DC 33 B DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? B DT 14 N3 ? ? ? 1_555 C DA 7 N1 ? ? C DT 34 B DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? B DT 14 O4 ? ? ? 1_555 C DA 7 N6 ? ? C DT 34 B DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? B DT 15 N3 ? ? ? 1_555 C DA 6 N1 ? ? C DT 35 B DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? B DT 15 O4 ? ? ? 1_555 C DA 6 N6 ? ? C DT 35 B DA 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog36 hydrog ? ? B DT 16 N3 ? ? ? 1_555 C DA 5 N1 ? ? C DT 36 B DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog37 hydrog ? ? B DT 16 O4 ? ? ? 1_555 C DA 5 N6 ? ? C DT 36 B DA 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog38 hydrog ? ? B DT 17 N3 ? ? ? 1_555 C DA 4 N1 ? ? C DT 37 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? B DT 17 O4 ? ? ? 1_555 C DA 4 N6 ? ? C DT 37 B DA 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog40 hydrog ? ? B DC 18 N3 ? ? ? 1_555 C DG 3 N1 ? ? C DC 38 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog41 hydrog ? ? B DC 18 N4 ? ? ? 1_555 C DG 3 O6 ? ? C DC 38 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog42 hydrog ? ? B DC 18 O2 ? ? ? 1_555 C DG 3 N2 ? ? C DC 38 B DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog43 hydrog ? ? B DC 19 N3 ? ? ? 1_555 C DG 2 N1 ? ? C DC 39 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog44 hydrog ? ? B DC 19 N4 ? ? ? 1_555 C DG 2 O6 ? ? C DC 39 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog45 hydrog ? ? B DC 19 O2 ? ? ? 1_555 C DG 2 N2 ? ? C DC 39 B DG 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog46 hydrog ? ? B DG 20 N1 ? ? ? 1_555 C DC 1 N3 ? ? C DG 40 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog47 hydrog ? ? B DG 20 N2 ? ? ? 1_555 C DC 1 O2 ? ? C DG 40 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog48 hydrog ? ? B DG 20 O6 ? ? ? 1_555 C DC 1 N4 ? ? C DG 40 B DC 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference metalc ? ? hydrog ? ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id A _struct_site.pdbx_auth_comp_id ZN _struct_site.pdbx_auth_seq_id 175 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 4 _struct_site.details 'BINDING SITE FOR RESIDUE ZN A 175' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 11 ? CYS A 114 . ? 1_555 ? 2 AC1 4 CYS A 14 ? CYS A 117 . ? 1_555 ? 3 AC1 4 CYS A 33 ? CYS A 136 . ? 1_555 ? 4 AC1 4 CYS A 36 ? CYS A 139 . ? 1_555 ? # _atom_sites.entry_id 2KAE _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C H N O P S ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 104 ? ? ? A . n A 1 2 SER 2 105 ? ? ? A . n A 1 3 HIS 3 106 ? ? ? A . n A 1 4 MET 4 107 ? ? ? A . n A 1 5 ASN 5 108 ? ? ? A . n A 1 6 LYS 6 109 ? ? ? A . n A 1 7 LYS 7 110 ? ? ? A . n A 1 8 SER 8 111 111 SER SER A . n A 1 9 PHE 9 112 112 PHE PHE A . n A 1 10 GLN 10 113 113 GLN GLN A . n A 1 11 CYS 11 114 114 CYS CYS A . n A 1 12 SER 12 115 115 SER SER A . n A 1 13 ASN 13 116 116 ASN ASN A . n A 1 14 CYS 14 117 117 CYS CYS A . n A 1 15 SER 15 118 118 SER SER A . n A 1 16 VAL 16 119 119 VAL VAL A . n A 1 17 THR 17 120 120 THR THR A . n A 1 18 GLU 18 121 121 GLU GLU A . n A 1 19 THR 19 122 122 THR THR A . n A 1 20 ILE 20 123 123 ILE ILE A . n A 1 21 ARG 21 124 124 ARG ARG A . n A 1 22 TRP 22 125 125 TRP TRP A . n A 1 23 ARG 23 126 126 ARG ARG A . n A 1 24 ASN 24 127 127 ASN ASN A . n A 1 25 ILE 25 128 128 ILE ILE A . n A 1 26 ARG 26 129 129 ARG ARG A . n A 1 27 SER 27 130 130 SER SER A . n A 1 28 LYS 28 131 131 LYS LYS A . n A 1 29 GLU 29 132 132 GLU GLU A . n A 1 30 GLY 30 133 133 GLY GLY A . n A 1 31 ILE 31 134 134 ILE ILE A . n A 1 32 GLN 32 135 135 GLN GLN A . n A 1 33 CYS 33 136 136 CYS CYS A . n A 1 34 ASN 34 137 137 ASN ASN A . n A 1 35 ALA 35 138 138 ALA ALA A . n A 1 36 CYS 36 139 139 CYS CYS A . n A 1 37 PHE 37 140 140 PHE PHE A . n A 1 38 ILE 38 141 141 ILE ILE A . n A 1 39 TYR 39 142 142 TYR TYR A . n A 1 40 GLN 40 143 143 GLN GLN A . n A 1 41 ARG 41 144 144 ARG ARG A . n A 1 42 LYS 42 145 145 LYS LYS A . n A 1 43 TYR 43 146 146 TYR TYR A . n A 1 44 ASN 44 147 147 ASN ASN A . n A 1 45 LYS 45 148 148 LYS LYS A . n A 1 46 THR 46 149 149 THR THR A . n A 1 47 ARG 47 150 150 ARG ARG A . n A 1 48 PRO 48 151 151 PRO PRO A . n A 1 49 VAL 49 152 152 VAL VAL A . n A 1 50 THR 50 153 153 THR THR A . n A 1 51 ALA 51 154 154 ALA ALA A . n A 1 52 VAL 52 155 155 VAL VAL A . n A 1 53 ASN 53 156 156 ASN ASN A . n A 1 54 LYS 54 157 157 LYS LYS A . n A 1 55 TYR 55 158 158 TYR TYR A . n A 1 56 GLN 56 159 159 GLN GLN A . n A 1 57 LYS 57 160 160 LYS LYS A . n A 1 58 ARG 58 161 161 ARG ARG A . n A 1 59 LYS 59 162 162 LYS LYS A . n A 1 60 LEU 60 163 163 LEU LEU A . n A 1 61 LYS 61 164 164 LYS LYS A . n A 1 62 VAL 62 165 165 VAL VAL A . n A 1 63 GLN 63 166 166 GLN GLN A . n A 1 64 GLU 64 167 ? ? ? A . n A 1 65 THR 65 168 ? ? ? A . n A 1 66 ASN 66 169 ? ? ? A . n A 1 67 GLY 67 170 ? ? ? A . n A 1 68 VAL 68 171 ? ? ? A . n A 1 69 ASP 69 172 ? ? ? A . n A 1 70 SER 70 173 ? ? ? A . n A 1 71 PHE 71 174 ? ? ? A . n B 2 1 DC 1 21 21 DC DC C . n B 2 2 DG 2 22 22 DG DG C . n B 2 3 DG 3 23 23 DG DG C . n B 2 4 DA 4 24 24 DA DA C . n B 2 5 DA 5 25 25 DA DA C . n B 2 6 DA 6 26 26 DA DA C . n B 2 7 DA 7 27 27 DA DA C . n B 2 8 DG 8 28 28 DG DG C . n B 2 9 DT 9 29 29 DT DT C . n B 2 10 DA 10 30 30 DA DA C . n B 2 11 DT 11 31 31 DT DT C . n B 2 12 DA 12 32 32 DA DA C . n B 2 13 DC 13 33 33 DC DC C . n B 2 14 DT 14 34 34 DT DT C . n B 2 15 DT 15 35 35 DT DT C . n B 2 16 DT 16 36 36 DT DT C . n B 2 17 DT 17 37 37 DT DT C . n B 2 18 DC 18 38 38 DC DC C . n B 2 19 DC 19 39 39 DC DC C . n B 2 20 DG 20 40 40 DG DG C . n C 2 1 DC 1 1 1 DC DC B . n C 2 2 DG 2 2 2 DG DG B . n C 2 3 DG 3 3 3 DG DG B . n C 2 4 DA 4 4 4 DA DA B . n C 2 5 DA 5 5 5 DA DA B . n C 2 6 DA 6 6 6 DA DA B . n C 2 7 DA 7 7 7 DA DA B . n C 2 8 DG 8 8 8 DG DG B . n C 2 9 DT 9 9 9 DT DT B . n C 2 10 DA 10 10 10 DA DA B . n C 2 11 DT 11 11 11 DT DT B . n C 2 12 DA 12 12 12 DA DA B . n C 2 13 DC 13 13 13 DC DC B . n C 2 14 DT 14 14 14 DT DT B . n C 2 15 DT 15 15 15 DT DT B . n C 2 16 DT 16 16 16 DT DT B . n C 2 17 DT 17 17 17 DT DT B . n C 2 18 DC 18 18 18 DC DC B . n C 2 19 DC 19 19 19 DC DC B . n C 2 20 DG 20 20 20 DG DG B . n # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 3 _pdbx_nonpoly_scheme.mon_id ZN _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 175 _pdbx_nonpoly_scheme.auth_seq_num 175 _pdbx_nonpoly_scheme.pdb_mon_id ZN _pdbx_nonpoly_scheme.auth_mon_id ZN _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 11 ? A CYS 114 ? 1_555 ZN ? D ZN . ? A ZN 175 ? 1_555 SG ? A CYS 14 ? A CYS 117 ? 1_555 114.2 ? 2 SG ? A CYS 11 ? A CYS 114 ? 1_555 ZN ? D ZN . ? A ZN 175 ? 1_555 SG ? A CYS 33 ? A CYS 136 ? 1_555 112.4 ? 3 SG ? A CYS 14 ? A CYS 117 ? 1_555 ZN ? D ZN . ? A ZN 175 ? 1_555 SG ? A CYS 33 ? A CYS 136 ? 1_555 105.2 ? 4 SG ? A CYS 11 ? A CYS 114 ? 1_555 ZN ? D ZN . ? A ZN 175 ? 1_555 SG ? A CYS 36 ? A CYS 139 ? 1_555 111.3 ? 5 SG ? A CYS 14 ? A CYS 117 ? 1_555 ZN ? D ZN . ? A ZN 175 ? 1_555 SG ? A CYS 36 ? A CYS 139 ? 1_555 105.7 ? 6 SG ? A CYS 33 ? A CYS 136 ? 1_555 ZN ? D ZN . ? A ZN 175 ? 1_555 SG ? A CYS 36 ? A CYS 139 ? 1_555 107.3 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-01-06 2 'Structure model' 1 1 2011-07-13 3 'Structure model' 1 2 2022-03-16 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Version format compliance' 2 3 'Structure model' 'Database references' 3 3 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' database_2 2 3 'Structure model' pdbx_struct_assembly 3 3 'Structure model' pdbx_struct_oper_list 4 3 'Structure model' struct_ref_seq 5 3 'Structure model' struct_ref_seq_dif 6 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_database_2.pdbx_DOI' 2 3 'Structure model' '_database_2.pdbx_database_accession' 3 3 'Structure model' '_struct_ref_seq.db_align_beg' 4 3 'Structure model' '_struct_ref_seq.db_align_end' 5 3 'Structure model' '_struct_ref_seq_dif.details' 6 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_nmr_exptl_sample.component _pdbx_nmr_exptl_sample.concentration _pdbx_nmr_exptl_sample.concentration_units _pdbx_nmr_exptl_sample.isotopic_labeling _pdbx_nmr_exptl_sample.solution_id 'sodium chloride' 40 mM ? 1 'potassium phosphate' 20 mM ? 1 DTT 1 mM ? 1 'sodium chloride' 40 mM ? 2 'potassium phosphate' 20 mM ? 2 DTT 1 mM ? 2 'Pf1 phage' 6 mg/mL ? 2 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 H22 C DG 28 ? ? O2 B DC 13 ? ? 1.58 2 1 H22 C DG 22 ? ? O2 B DC 19 ? ? 1.59 3 1 H62 C DA 24 ? ? O4 B DT 17 ? ? 1.59 4 2 O2 C DC 39 ? ? H22 B DG 2 ? ? 1.49 5 2 H22 C DG 40 ? ? O2 B DC 1 ? ? 1.52 6 2 H22 C DG 28 ? ? O2 B DC 13 ? ? 1.57 7 2 HG1 A THR 120 ? ? OE2 A GLU 121 ? ? 1.59 8 3 H22 C DG 22 ? ? O2 B DC 19 ? ? 1.53 9 3 O2 C DC 38 ? ? H22 B DG 3 ? ? 1.57 10 3 H22 C DG 40 ? ? O2 B DC 1 ? ? 1.58 11 3 O4 C DT 29 ? ? H62 B DA 12 ? ? 1.60 12 4 H22 C DG 40 ? ? O2 B DC 1 ? ? 1.53 13 4 H22 C DG 28 ? ? O2 B DC 13 ? ? 1.59 14 4 O2 C DC 33 ? ? H22 B DG 8 ? ? 1.59 15 5 HZ2 A LYS 131 ? ? OE1 A GLU 132 ? ? 1.57 16 5 H22 C DG 28 ? ? O2 B DC 13 ? ? 1.59 17 5 O4 C DT 29 ? ? H62 B DA 12 ? ? 1.59 18 5 H22 C DG 23 ? ? O2 B DC 18 ? ? 1.60 19 6 O2 C DC 38 ? ? H22 B DG 3 ? ? 1.57 20 6 H62 C DA 25 ? ? O4 B DT 16 ? ? 1.58 21 6 H22 C DG 28 ? ? O2 B DC 13 ? ? 1.59 22 6 H22 C DG 22 ? ? O2 B DC 19 ? ? 1.59 23 6 O2 C DC 21 ? ? H22 B DG 20 ? ? 1.60 24 7 H22 C DG 28 ? ? O2 B DC 13 ? ? 1.52 25 7 O2 C DC 38 ? ? H22 B DG 3 ? ? 1.55 26 7 O2 C DC 21 ? ? H22 B DG 20 ? ? 1.57 27 7 H22 C DG 23 ? ? O2 B DC 18 ? ? 1.58 28 7 O2 C DC 33 ? ? H22 B DG 8 ? ? 1.58 29 8 H22 C DG 23 ? ? O2 B DC 18 ? ? 1.58 30 8 H22 C DG 28 ? ? O2 B DC 13 ? ? 1.59 31 9 H22 C DG 28 ? ? O2 B DC 13 ? ? 1.56 32 9 H22 C DG 22 ? ? O2 B DC 19 ? ? 1.57 33 9 O2 C DC 21 ? ? H22 B DG 20 ? ? 1.59 34 9 O2 C DC 38 ? ? H22 B DG 3 ? ? 1.59 35 9 H22 C DG 40 ? ? O2 B DC 1 ? ? 1.59 36 9 O2 C DC 39 ? ? H22 B DG 2 ? ? 1.60 37 10 O A LYS 162 ? ? H A LYS 164 ? ? 1.54 38 10 O2 C DC 33 ? ? H22 B DG 8 ? ? 1.56 39 10 H22 C DG 40 ? ? O2 B DC 1 ? ? 1.56 40 10 O2 C DC 39 ? ? H22 B DG 2 ? ? 1.56 41 10 O2 C DC 21 ? ? H22 B DG 20 ? ? 1.57 42 10 H22 C DG 22 ? ? O2 B DC 19 ? ? 1.60 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 112 ? ? -127.43 -106.30 2 1 GLN A 113 ? ? 174.29 157.70 3 1 ASN A 116 ? ? -159.86 -41.39 4 1 CYS A 117 ? ? -90.59 -73.40 5 1 SER A 118 ? ? 82.65 82.61 6 1 ARG A 126 ? ? -165.71 17.37 7 1 ILE A 128 ? ? 45.98 83.80 8 1 ARG A 129 ? ? -34.72 96.09 9 1 SER A 130 ? ? -153.33 -78.53 10 1 LYS A 131 ? ? -144.54 -66.63 11 1 LYS A 148 ? ? -162.67 -163.90 12 2 PHE A 112 ? ? -105.81 -96.76 13 2 GLN A 113 ? ? 165.59 160.57 14 2 ASN A 116 ? ? -160.00 -42.44 15 2 CYS A 117 ? ? -92.88 -76.96 16 2 SER A 118 ? ? 90.40 84.30 17 2 ARG A 124 ? ? -173.70 108.25 18 2 ARG A 126 ? ? -168.96 22.04 19 2 ILE A 128 ? ? 38.75 75.35 20 2 ARG A 129 ? ? -31.98 92.16 21 2 SER A 130 ? ? -130.99 -73.42 22 2 LYS A 131 ? ? -131.66 -64.56 23 2 GLU A 132 ? ? -92.50 -157.74 24 2 ASN A 147 ? ? -145.02 -37.79 25 2 LEU A 163 ? ? -69.15 7.49 26 3 PHE A 112 ? ? -94.96 -95.56 27 3 GLN A 113 ? ? 167.89 163.30 28 3 ASN A 116 ? ? -163.27 -49.36 29 3 CYS A 117 ? ? -88.09 -80.42 30 3 SER A 118 ? ? 93.98 78.98 31 3 ILE A 123 ? ? -57.99 -8.59 32 3 ARG A 124 ? ? 177.84 107.31 33 3 ARG A 126 ? ? -167.74 17.39 34 3 ILE A 128 ? ? 47.66 80.16 35 3 ARG A 129 ? ? -27.36 95.75 36 3 SER A 130 ? ? -151.11 -77.59 37 3 LYS A 131 ? ? -127.99 -71.07 38 3 ASN A 147 ? ? -132.65 -37.74 39 3 LEU A 163 ? ? -53.81 8.59 40 4 PHE A 112 ? ? -84.00 -99.32 41 4 GLN A 113 ? ? 168.94 162.36 42 4 ASN A 116 ? ? -164.62 -38.73 43 4 CYS A 117 ? ? -96.23 -129.08 44 4 SER A 118 ? ? 159.88 69.74 45 4 ARG A 124 ? ? 176.13 110.77 46 4 ARG A 126 ? ? -162.46 8.27 47 4 ILE A 128 ? ? 49.87 76.81 48 4 ARG A 129 ? ? -29.57 95.71 49 4 SER A 130 ? ? -145.96 -68.57 50 4 LYS A 131 ? ? -140.92 -60.70 51 5 PHE A 112 ? ? -82.77 -97.47 52 5 GLN A 113 ? ? 167.57 159.11 53 5 SER A 115 ? ? -98.15 32.22 54 5 ASN A 116 ? ? -162.43 -46.28 55 5 SER A 118 ? ? 78.45 75.43 56 5 ILE A 123 ? ? -56.27 -8.19 57 5 ARG A 124 ? ? -177.18 111.38 58 5 ARG A 126 ? ? -167.94 17.01 59 5 ILE A 128 ? ? 45.66 83.08 60 5 ARG A 129 ? ? -28.10 95.63 61 5 SER A 130 ? ? -145.87 -72.01 62 5 LYS A 131 ? ? -137.69 -72.67 63 5 ASN A 147 ? ? -144.44 -42.92 64 5 LYS A 164 ? ? -90.66 -84.47 65 5 VAL A 165 ? ? -173.51 147.40 66 6 PHE A 112 ? ? -77.08 -99.58 67 6 GLN A 113 ? ? 168.53 159.03 68 6 ASN A 116 ? ? -159.73 -48.25 69 6 CYS A 117 ? ? -89.13 -81.68 70 6 SER A 118 ? ? 96.80 83.37 71 6 ARG A 124 ? ? -178.15 109.68 72 6 ARG A 126 ? ? -162.68 17.62 73 6 ILE A 128 ? ? 45.47 80.30 74 6 ARG A 129 ? ? -30.51 92.38 75 6 SER A 130 ? ? -149.41 -80.23 76 6 LYS A 131 ? ? -123.64 -71.59 77 6 GLU A 132 ? ? -88.49 -159.69 78 6 LEU A 163 ? ? -54.09 16.52 79 7 PHE A 112 ? ? -121.90 -102.67 80 7 GLN A 113 ? ? 168.26 165.91 81 7 ASN A 116 ? ? -156.11 -43.41 82 7 CYS A 117 ? ? -90.07 -79.03 83 7 SER A 118 ? ? 87.76 82.08 84 7 ARG A 124 ? ? -168.27 113.16 85 7 ARG A 126 ? ? -172.27 26.55 86 7 ILE A 128 ? ? 45.24 79.41 87 7 ARG A 129 ? ? -33.19 90.10 88 7 SER A 130 ? ? -145.95 -84.82 89 7 LYS A 131 ? ? -129.84 -64.28 90 7 LEU A 163 ? ? -68.39 16.10 91 8 PHE A 112 ? ? -91.84 -94.78 92 8 GLN A 113 ? ? 164.20 167.66 93 8 ASN A 116 ? ? -161.64 -40.07 94 8 CYS A 117 ? ? -98.80 -79.65 95 8 SER A 118 ? ? 95.26 85.14 96 8 ARG A 124 ? ? -176.38 113.22 97 8 ARG A 126 ? ? -161.65 13.88 98 8 ILE A 128 ? ? 45.59 75.07 99 8 ARG A 129 ? ? -29.69 98.16 100 8 SER A 130 ? ? -146.43 -75.03 101 8 LYS A 131 ? ? -131.71 -68.88 102 8 ASN A 147 ? ? -134.95 -39.49 103 8 LYS A 164 ? ? -71.66 -86.00 104 9 GLN A 113 ? ? -66.46 -179.25 105 9 ASN A 116 ? ? -158.96 -41.65 106 9 CYS A 117 ? ? -93.48 -131.30 107 9 SER A 118 ? ? 162.18 63.94 108 9 ARG A 124 ? ? 174.51 112.56 109 9 ARG A 126 ? ? -162.40 14.76 110 9 ILE A 128 ? ? 45.94 76.02 111 9 ARG A 129 ? ? -28.51 91.96 112 9 SER A 130 ? ? -148.20 -77.35 113 9 LYS A 131 ? ? -131.71 -68.44 114 9 ASN A 147 ? ? -134.43 -35.11 115 9 LEU A 163 ? ? -55.61 -8.28 116 9 VAL A 165 ? ? -49.64 161.48 117 10 PHE A 112 ? ? -89.33 -98.06 118 10 GLN A 113 ? ? 165.52 165.02 119 10 ASN A 116 ? ? -159.86 -44.46 120 10 CYS A 117 ? ? -93.82 -78.21 121 10 SER A 118 ? ? 93.26 83.89 122 10 ARG A 124 ? ? -176.50 111.90 123 10 ARG A 126 ? ? -164.55 16.55 124 10 ILE A 128 ? ? 47.15 78.73 125 10 ARG A 129 ? ? -30.34 96.82 126 10 SER A 130 ? ? -146.92 -82.79 127 10 LYS A 131 ? ? -135.19 -55.86 128 10 ASN A 147 ? ? -134.17 -40.77 129 10 LEU A 163 ? ? -43.41 22.46 130 10 LYS A 164 ? ? -66.70 23.82 131 10 VAL A 165 ? ? -74.14 -165.21 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 104 ? A GLY 1 2 1 Y 1 A SER 105 ? A SER 2 3 1 Y 1 A HIS 106 ? A HIS 3 4 1 Y 1 A MET 107 ? A MET 4 5 1 Y 1 A ASN 108 ? A ASN 5 6 1 Y 1 A LYS 109 ? A LYS 6 7 1 Y 1 A LYS 110 ? A LYS 7 8 1 Y 1 A GLU 167 ? A GLU 64 9 1 Y 1 A THR 168 ? A THR 65 10 1 Y 1 A ASN 169 ? A ASN 66 11 1 Y 1 A GLY 170 ? A GLY 67 12 1 Y 1 A VAL 171 ? A VAL 68 13 1 Y 1 A ASP 172 ? A ASP 69 14 1 Y 1 A SER 173 ? A SER 70 15 1 Y 1 A PHE 174 ? A PHE 71 16 2 Y 1 A GLY 104 ? A GLY 1 17 2 Y 1 A SER 105 ? A SER 2 18 2 Y 1 A HIS 106 ? A HIS 3 19 2 Y 1 A MET 107 ? A MET 4 20 2 Y 1 A ASN 108 ? A ASN 5 21 2 Y 1 A LYS 109 ? A LYS 6 22 2 Y 1 A LYS 110 ? A LYS 7 23 2 Y 1 A GLU 167 ? A GLU 64 24 2 Y 1 A THR 168 ? A THR 65 25 2 Y 1 A ASN 169 ? A ASN 66 26 2 Y 1 A GLY 170 ? A GLY 67 27 2 Y 1 A VAL 171 ? A VAL 68 28 2 Y 1 A ASP 172 ? A ASP 69 29 2 Y 1 A SER 173 ? A SER 70 30 2 Y 1 A PHE 174 ? A PHE 71 31 3 Y 1 A GLY 104 ? A GLY 1 32 3 Y 1 A SER 105 ? A SER 2 33 3 Y 1 A HIS 106 ? A HIS 3 34 3 Y 1 A MET 107 ? A MET 4 35 3 Y 1 A ASN 108 ? A ASN 5 36 3 Y 1 A LYS 109 ? A LYS 6 37 3 Y 1 A LYS 110 ? A LYS 7 38 3 Y 1 A GLU 167 ? A GLU 64 39 3 Y 1 A THR 168 ? A THR 65 40 3 Y 1 A ASN 169 ? A ASN 66 41 3 Y 1 A GLY 170 ? A GLY 67 42 3 Y 1 A VAL 171 ? A VAL 68 43 3 Y 1 A ASP 172 ? A ASP 69 44 3 Y 1 A SER 173 ? A SER 70 45 3 Y 1 A PHE 174 ? A PHE 71 46 4 Y 1 A GLY 104 ? A GLY 1 47 4 Y 1 A SER 105 ? A SER 2 48 4 Y 1 A HIS 106 ? A HIS 3 49 4 Y 1 A MET 107 ? A MET 4 50 4 Y 1 A ASN 108 ? A ASN 5 51 4 Y 1 A LYS 109 ? A LYS 6 52 4 Y 1 A LYS 110 ? A LYS 7 53 4 Y 1 A GLU 167 ? A GLU 64 54 4 Y 1 A THR 168 ? A THR 65 55 4 Y 1 A ASN 169 ? A ASN 66 56 4 Y 1 A GLY 170 ? A GLY 67 57 4 Y 1 A VAL 171 ? A VAL 68 58 4 Y 1 A ASP 172 ? A ASP 69 59 4 Y 1 A SER 173 ? A SER 70 60 4 Y 1 A PHE 174 ? A PHE 71 61 5 Y 1 A GLY 104 ? A GLY 1 62 5 Y 1 A SER 105 ? A SER 2 63 5 Y 1 A HIS 106 ? A HIS 3 64 5 Y 1 A MET 107 ? A MET 4 65 5 Y 1 A ASN 108 ? A ASN 5 66 5 Y 1 A LYS 109 ? A LYS 6 67 5 Y 1 A LYS 110 ? A LYS 7 68 5 Y 1 A GLU 167 ? A GLU 64 69 5 Y 1 A THR 168 ? A THR 65 70 5 Y 1 A ASN 169 ? A ASN 66 71 5 Y 1 A GLY 170 ? A GLY 67 72 5 Y 1 A VAL 171 ? A VAL 68 73 5 Y 1 A ASP 172 ? A ASP 69 74 5 Y 1 A SER 173 ? A SER 70 75 5 Y 1 A PHE 174 ? A PHE 71 76 6 Y 1 A GLY 104 ? A GLY 1 77 6 Y 1 A SER 105 ? A SER 2 78 6 Y 1 A HIS 106 ? A HIS 3 79 6 Y 1 A MET 107 ? A MET 4 80 6 Y 1 A ASN 108 ? A ASN 5 81 6 Y 1 A LYS 109 ? A LYS 6 82 6 Y 1 A LYS 110 ? A LYS 7 83 6 Y 1 A GLU 167 ? A GLU 64 84 6 Y 1 A THR 168 ? A THR 65 85 6 Y 1 A ASN 169 ? A ASN 66 86 6 Y 1 A GLY 170 ? A GLY 67 87 6 Y 1 A VAL 171 ? A VAL 68 88 6 Y 1 A ASP 172 ? A ASP 69 89 6 Y 1 A SER 173 ? A SER 70 90 6 Y 1 A PHE 174 ? A PHE 71 91 7 Y 1 A GLY 104 ? A GLY 1 92 7 Y 1 A SER 105 ? A SER 2 93 7 Y 1 A HIS 106 ? A HIS 3 94 7 Y 1 A MET 107 ? A MET 4 95 7 Y 1 A ASN 108 ? A ASN 5 96 7 Y 1 A LYS 109 ? A LYS 6 97 7 Y 1 A LYS 110 ? A LYS 7 98 7 Y 1 A GLU 167 ? A GLU 64 99 7 Y 1 A THR 168 ? A THR 65 100 7 Y 1 A ASN 169 ? A ASN 66 101 7 Y 1 A GLY 170 ? A GLY 67 102 7 Y 1 A VAL 171 ? A VAL 68 103 7 Y 1 A ASP 172 ? A ASP 69 104 7 Y 1 A SER 173 ? A SER 70 105 7 Y 1 A PHE 174 ? A PHE 71 106 8 Y 1 A GLY 104 ? A GLY 1 107 8 Y 1 A SER 105 ? A SER 2 108 8 Y 1 A HIS 106 ? A HIS 3 109 8 Y 1 A MET 107 ? A MET 4 110 8 Y 1 A ASN 108 ? A ASN 5 111 8 Y 1 A LYS 109 ? A LYS 6 112 8 Y 1 A LYS 110 ? A LYS 7 113 8 Y 1 A GLU 167 ? A GLU 64 114 8 Y 1 A THR 168 ? A THR 65 115 8 Y 1 A ASN 169 ? A ASN 66 116 8 Y 1 A GLY 170 ? A GLY 67 117 8 Y 1 A VAL 171 ? A VAL 68 118 8 Y 1 A ASP 172 ? A ASP 69 119 8 Y 1 A SER 173 ? A SER 70 120 8 Y 1 A PHE 174 ? A PHE 71 121 9 Y 1 A GLY 104 ? A GLY 1 122 9 Y 1 A SER 105 ? A SER 2 123 9 Y 1 A HIS 106 ? A HIS 3 124 9 Y 1 A MET 107 ? A MET 4 125 9 Y 1 A ASN 108 ? A ASN 5 126 9 Y 1 A LYS 109 ? A LYS 6 127 9 Y 1 A LYS 110 ? A LYS 7 128 9 Y 1 A GLU 167 ? A GLU 64 129 9 Y 1 A THR 168 ? A THR 65 130 9 Y 1 A ASN 169 ? A ASN 66 131 9 Y 1 A GLY 170 ? A GLY 67 132 9 Y 1 A VAL 171 ? A VAL 68 133 9 Y 1 A ASP 172 ? A ASP 69 134 9 Y 1 A SER 173 ? A SER 70 135 9 Y 1 A PHE 174 ? A PHE 71 136 10 Y 1 A GLY 104 ? A GLY 1 137 10 Y 1 A SER 105 ? A SER 2 138 10 Y 1 A HIS 106 ? A HIS 3 139 10 Y 1 A MET 107 ? A MET 4 140 10 Y 1 A ASN 108 ? A ASN 5 141 10 Y 1 A LYS 109 ? A LYS 6 142 10 Y 1 A LYS 110 ? A LYS 7 143 10 Y 1 A GLU 167 ? A GLU 64 144 10 Y 1 A THR 168 ? A THR 65 145 10 Y 1 A ASN 169 ? A ASN 66 146 10 Y 1 A GLY 170 ? A GLY 67 147 10 Y 1 A VAL 171 ? A VAL 68 148 10 Y 1 A ASP 172 ? A ASP 69 149 10 Y 1 A SER 173 ? A SER 70 150 10 Y 1 A PHE 174 ? A PHE 71 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 2KAE 'double helix' 2KAE 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 B DC 1 1_555 C DG 20 1_555 0.529 -0.131 -0.041 -0.526 0.055 0.480 1 C_DC21:DG20_B C 21 ? B 20 ? 19 1 1 B DG 2 1_555 C DC 19 1_555 -0.384 -0.253 0.023 -1.673 -4.239 1.860 2 C_DG22:DC19_B C 22 ? B 19 ? 19 1 1 B DG 3 1_555 C DC 18 1_555 -0.686 -0.226 0.007 0.097 -2.799 3.177 3 C_DG23:DC18_B C 23 ? B 18 ? 19 1 1 B DA 4 1_555 C DT 17 1_555 0.024 -0.229 -0.020 0.232 -3.120 -7.558 4 C_DA24:DT17_B C 24 ? B 17 ? 20 1 1 B DA 5 1_555 C DT 16 1_555 0.243 -0.169 0.002 1.938 -1.594 -7.296 5 C_DA25:DT16_B C 25 ? B 16 ? 20 1 1 B DA 6 1_555 C DT 15 1_555 -0.398 -0.247 -0.103 0.641 3.688 -10.387 6 C_DA26:DT15_B C 26 ? B 15 ? 20 1 1 B DA 7 1_555 C DT 14 1_555 0.023 0.054 -0.197 -2.284 1.615 -3.254 7 C_DA27:DT14_B C 27 ? B 14 ? 20 1 1 B DG 8 1_555 C DC 13 1_555 -0.484 -0.051 0.012 -1.007 -0.318 6.319 8 C_DG28:DC13_B C 28 ? B 13 ? 19 1 1 B DT 9 1_555 C DA 12 1_555 -0.049 -0.261 0.035 2.280 -2.015 -1.769 9 C_DT29:DA12_B C 29 ? B 12 ? 20 1 1 B DA 10 1_555 C DT 11 1_555 0.344 -0.104 -0.078 -2.313 -0.218 -9.946 10 C_DA30:DT11_B C 30 ? B 11 ? 20 1 1 B DT 11 1_555 C DA 10 1_555 -0.026 0.030 -0.019 0.651 -0.812 2.584 11 C_DT31:DA10_B C 31 ? B 10 ? 20 1 1 B DA 12 1_555 C DT 9 1_555 0.195 -0.190 -0.089 -0.238 0.382 -1.723 12 C_DA32:DT9_B C 32 ? B 9 ? 20 1 1 B DC 13 1_555 C DG 8 1_555 0.766 -0.206 -0.082 1.373 -2.293 2.310 13 C_DC33:DG8_B C 33 ? B 8 ? 19 1 1 B DT 14 1_555 C DA 7 1_555 -0.217 -0.185 0.025 -0.859 -4.817 0.251 14 C_DT34:DA7_B C 34 ? B 7 ? 20 1 1 B DT 15 1_555 C DA 6 1_555 -0.171 -0.185 -0.024 0.608 -2.195 -2.081 15 C_DT35:DA6_B C 35 ? B 6 ? 20 1 1 B DT 16 1_555 C DA 5 1_555 -0.162 -0.150 -0.032 1.398 -0.673 -1.240 16 C_DT36:DA5_B C 36 ? B 5 ? 20 1 1 B DT 17 1_555 C DA 4 1_555 -0.075 -0.142 0.038 -0.944 -2.110 0.507 17 C_DT37:DA4_B C 37 ? B 4 ? 20 1 1 B DC 18 1_555 C DG 3 1_555 0.630 -0.223 -0.034 0.563 -0.702 2.345 18 C_DC38:DG3_B C 38 ? B 3 ? 19 1 1 B DC 19 1_555 C DG 2 1_555 0.634 -0.254 -0.002 0.038 -0.337 2.234 19 C_DC39:DG2_B C 39 ? B 2 ? 19 1 1 B DG 20 1_555 C DC 1 1_555 -0.513 -0.199 0.033 1.727 0.546 2.391 20 C_DG40:DC1_B C 40 ? B 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 B DC 1 1_555 C DG 20 1_555 B DG 2 1_555 C DC 19 1_555 0.110 0.681 3.157 2.452 2.517 36.161 0.751 0.156 3.196 4.043 -3.939 36.325 1 CC_DC21DG22:DC19DG20_BB C 21 ? B 20 ? C 22 ? B 19 ? 1 B DG 2 1_555 C DC 19 1_555 B DG 3 1_555 C DC 18 1_555 -0.051 1.235 3.504 -2.744 -3.618 36.953 2.442 -0.305 3.367 -5.682 4.310 37.221 2 CC_DG22DG23:DC18DC19_BB C 22 ? B 19 ? C 23 ? B 18 ? 1 B DG 3 1_555 C DC 18 1_555 B DA 4 1_555 C DT 17 1_555 -1.115 0.771 3.254 -4.892 4.971 39.880 0.541 1.049 3.429 7.221 7.106 40.461 3 CC_DG23DA24:DT17DC18_BB C 23 ? B 18 ? C 24 ? B 17 ? 1 B DA 4 1_555 C DT 17 1_555 B DA 5 1_555 C DT 16 1_555 -0.165 0.619 3.200 -2.051 -2.968 37.787 1.321 -0.001 3.148 -4.570 3.158 37.953 4 CC_DA24DA25:DT16DT17_BB C 24 ? B 17 ? C 25 ? B 16 ? 1 B DA 5 1_555 C DT 16 1_555 B DA 6 1_555 C DT 15 1_555 -0.402 -0.354 3.304 -5.621 -2.933 34.499 -0.137 -0.197 3.344 -4.894 9.379 35.060 5 CC_DA25DA26:DT15DT16_BB C 25 ? B 16 ? C 26 ? B 15 ? 1 B DA 6 1_555 C DT 15 1_555 B DA 7 1_555 C DT 14 1_555 0.674 -0.573 3.681 1.609 -3.742 34.814 -0.312 -0.845 3.747 -6.228 -2.677 35.044 6 CC_DA26DA27:DT14DT15_BB C 26 ? B 15 ? C 27 ? B 14 ? 1 B DA 7 1_555 C DT 14 1_555 B DG 8 1_555 C DC 13 1_555 0.723 0.419 3.557 0.849 -2.267 32.435 1.179 -1.129 3.537 -4.052 -1.518 32.523 7 CC_DA27DG28:DC13DT14_BB C 27 ? B 14 ? C 28 ? B 13 ? 1 B DG 8 1_555 C DC 13 1_555 B DT 9 1_555 C DA 12 1_555 -0.629 0.616 3.585 0.161 3.879 33.416 0.364 1.117 3.629 6.718 -0.278 33.634 8 CC_DG28DT29:DA12DC13_BB C 28 ? B 13 ? C 29 ? B 12 ? 1 B DT 9 1_555 C DA 12 1_555 B DA 10 1_555 C DT 11 1_555 -0.499 0.229 3.076 0.400 -0.261 42.514 0.341 0.727 3.070 -0.360 -0.551 42.517 9 CC_DT29DA30:DT11DA12_BB C 29 ? B 12 ? C 30 ? B 11 ? 1 B DA 10 1_555 C DT 11 1_555 B DT 11 1_555 C DA 10 1_555 0.918 0.231 3.666 1.698 -15.205 35.278 2.477 -1.161 3.332 -23.758 -2.653 38.356 10 CC_DA30DT31:DA10DT11_BB C 30 ? B 11 ? C 31 ? B 10 ? 1 B DT 11 1_555 C DA 10 1_555 B DA 12 1_555 C DT 9 1_555 -0.734 0.568 3.252 -3.935 8.721 36.154 -0.295 0.612 3.353 13.758 6.208 37.357 11 CC_DT31DA32:DT9DA10_BB C 31 ? B 10 ? C 32 ? B 9 ? 1 B DA 12 1_555 C DT 9 1_555 B DC 13 1_555 C DG 8 1_555 0.097 0.095 3.222 -1.189 0.659 36.153 0.061 -0.322 3.219 1.061 1.915 36.177 12 CC_DA32DC33:DG8DT9_BB C 32 ? B 9 ? C 33 ? B 8 ? 1 B DC 13 1_555 C DG 8 1_555 B DT 14 1_555 C DA 7 1_555 0.107 -0.852 3.008 1.703 2.058 31.090 -1.941 0.096 2.949 3.831 -3.170 31.202 13 CC_DC33DT34:DA7DG8_BB C 33 ? B 8 ? C 34 ? B 7 ? 1 B DT 14 1_555 C DA 7 1_555 B DT 15 1_555 C DA 6 1_555 0.030 0.460 3.456 2.092 -9.043 38.741 1.769 0.209 3.269 -13.398 -3.100 39.796 14 CC_DT34DT35:DA6DA7_BB C 34 ? B 7 ? C 35 ? B 6 ? 1 B DT 15 1_555 C DA 6 1_555 B DT 16 1_555 C DA 5 1_555 0.257 0.946 3.415 3.889 1.135 36.711 1.332 0.147 3.450 1.795 -6.152 36.926 15 CC_DT35DT36:DA5DA6_BB C 35 ? B 6 ? C 36 ? B 5 ? 1 B DT 16 1_555 C DA 5 1_555 B DT 17 1_555 C DA 4 1_555 0.272 0.672 3.472 0.467 10.655 33.211 -0.652 -0.377 3.518 18.070 -0.791 34.836 16 CC_DT36DT37:DA4DA5_BB C 36 ? B 5 ? C 37 ? B 4 ? 1 B DT 17 1_555 C DA 4 1_555 B DC 18 1_555 C DG 3 1_555 -0.020 0.781 3.545 -0.951 -1.224 40.945 1.260 -0.084 3.521 -1.749 1.359 40.973 17 CC_DT37DC38:DG3DA4_BB C 37 ? B 4 ? C 38 ? B 3 ? 1 B DC 18 1_555 C DG 3 1_555 B DC 19 1_555 C DG 2 1_555 0.564 0.947 3.420 4.629 0.928 37.547 1.335 -0.240 3.484 1.435 -7.156 37.832 18 CC_DC38DC39:DG2DG3_BB C 38 ? B 3 ? C 39 ? B 2 ? 1 B DC 19 1_555 C DG 2 1_555 B DG 20 1_555 C DC 1 1_555 -0.349 1.198 3.110 -2.542 2.081 34.576 1.699 0.209 3.191 3.491 4.266 34.727 19 CC_DC39DG40:DC1DG2_BB C 39 ? B 2 ? C 40 ? B 1 ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name 'ZINC ION' _pdbx_entity_nonpoly.comp_id ZN #