data_2KAW # _entry.id 2KAW # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 2KAW RCSB RCSB100893 WWPDB D_1000100893 # loop_ _pdbx_database_related.content_type _pdbx_database_related.db_id _pdbx_database_related.db_name _pdbx_database_related.details unspecified 1mc7 PDB 'mDvl1 PDZ' unspecified 1l6o PDB 'Xdsh PDZ' # _pdbx_database_status.deposit_site BMRB _pdbx_database_status.entry_id 2KAW _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2008-11-17 _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code REL _pdbx_database_status.status_code_mr REL _pdbx_database_status.status_code_sf ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Lee, H.J.' 1 'Shao, Y.' 2 'Wang, N.X.' 3 'Shi, D.L.' 4 'Zheng, J.J.' 5 # _citation.id primary _citation.title 'Sulindac inhibits canonical Wnt signaling by blocking the PDZ domain of the protein Dishevelled.' _citation.journal_abbrev Angew.Chem.Int.Ed.Engl. _citation.journal_volume 48 _citation.page_first 6448 _citation.page_last 6452 _citation.year 2009 _citation.journal_id_ASTM ? _citation.country GE _citation.journal_id_ISSN 1433-7851 _citation.journal_id_CSD 9999 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 19637179 _citation.pdbx_database_id_DOI 10.1002/anie.200902981 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Lee, H.J.' 1 primary 'Wang, N.X.' 2 primary 'Shi, D.L.' 3 primary 'Zheng, J.J.' 4 # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Segment polarity protein dishevelled homolog DVL-1' 9632.888 1 ? ? 'UNP RESIDUES 248-337, PDZ DOMAIN' ? 2 non-polymer syn '[(1Z)-5-fluoro-2-methyl-1-{4-[methylsulfinyl]benzylidene}-1H-inden-3-yl]acetic acid' 356.411 1 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Dishevelled-1, DSH homolog 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;NIITVTLNMERHHFLGISIVGQSNDRGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDVNFENMSNDDAVRVLREIVSQ TGPISLTVAK ; _entity_poly.pdbx_seq_one_letter_code_can ;NIITVTLNMERHHFLGISIVGQSNDRGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDVNFENMSNDDAVRVLREIVSQ TGPISLTVAK ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ASN n 1 2 ILE n 1 3 ILE n 1 4 THR n 1 5 VAL n 1 6 THR n 1 7 LEU n 1 8 ASN n 1 9 MET n 1 10 GLU n 1 11 ARG n 1 12 HIS n 1 13 HIS n 1 14 PHE n 1 15 LEU n 1 16 GLY n 1 17 ILE n 1 18 SER n 1 19 ILE n 1 20 VAL n 1 21 GLY n 1 22 GLN n 1 23 SER n 1 24 ASN n 1 25 ASP n 1 26 ARG n 1 27 GLY n 1 28 ASP n 1 29 GLY n 1 30 GLY n 1 31 ILE n 1 32 TYR n 1 33 ILE n 1 34 GLY n 1 35 SER n 1 36 ILE n 1 37 MET n 1 38 LYS n 1 39 GLY n 1 40 GLY n 1 41 ALA n 1 42 VAL n 1 43 ALA n 1 44 ALA n 1 45 ASP n 1 46 GLY n 1 47 ARG n 1 48 ILE n 1 49 GLU n 1 50 PRO n 1 51 GLY n 1 52 ASP n 1 53 MET n 1 54 LEU n 1 55 LEU n 1 56 GLN n 1 57 VAL n 1 58 ASN n 1 59 ASP n 1 60 VAL n 1 61 ASN n 1 62 PHE n 1 63 GLU n 1 64 ASN n 1 65 MET n 1 66 SER n 1 67 ASN n 1 68 ASP n 1 69 ASP n 1 70 ALA n 1 71 VAL n 1 72 ARG n 1 73 VAL n 1 74 LEU n 1 75 ARG n 1 76 GLU n 1 77 ILE n 1 78 VAL n 1 79 SER n 1 80 GLN n 1 81 THR n 1 82 GLY n 1 83 PRO n 1 84 ILE n 1 85 SER n 1 86 LEU n 1 87 THR n 1 88 VAL n 1 89 ALA n 1 90 LYS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name mouse _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'Dvl1, Dvl' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Mus musculus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10090 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'ESCHERICHIA COLI' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL-21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector PET28 _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code DVL1_MOUSE _struct_ref.pdbx_db_accession P51141 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;NIITVTLNMERHHFLGISIVGQSNDRGDGGIYIGSIMKGGAVAADGRIEPGDMLLQVNDVNFENMSNDDAVRVLREIVSQ TGPISLTVAK ; _struct_ref.pdbx_align_begin 248 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 2KAW _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 90 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P51141 _struct_ref_seq.db_align_beg 248 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 337 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 90 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SUZ non-polymer . '[(1Z)-5-fluoro-2-methyl-1-{4-[methylsulfinyl]benzylidene}-1H-inden-3-yl]acetic acid' SULINDAC 'C20 H17 F O3 S' 356.411 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_nmr_exptl.conditions_id _pdbx_nmr_exptl.experiment_id _pdbx_nmr_exptl.solution_id _pdbx_nmr_exptl.type 1 1 1 3D_13C-F1_HALF_FILTERED_F2_EDIT 1 2 1 '2D 1H-15N HSQC' 1 3 1 '2D 1H-13C HSQC' 1 4 1 '3D CBCA(CO)NH' 1 5 1 '3D HNCO' 1 6 1 '3D CBCA(CO)NH' 1 7 1 '3D HCCH-TOCSY' # _pdbx_nmr_exptl_sample_conditions.conditions_id 1 _pdbx_nmr_exptl_sample_conditions.ionic_strength 100 _pdbx_nmr_exptl_sample_conditions.pH 7.5 _pdbx_nmr_exptl_sample_conditions.pressure AMBIENT _pdbx_nmr_exptl_sample_conditions.pressure_units ? _pdbx_nmr_exptl_sample_conditions.temperature 293 _pdbx_nmr_exptl_sample_conditions.temperature_units K # _pdbx_nmr_sample_details.contents '1MM MDVL1 PDZ DOMAIN U-15N,13C, 10 MM SUZ, 100MM PHOSPHATE BUFFER PH 7.5, 90% H2O, 10% D2O' _pdbx_nmr_sample_details.solution_id 1 _pdbx_nmr_sample_details.solvent_system '90% H2O/10% D2O' # loop_ _pdbx_nmr_spectrometer.field_strength _pdbx_nmr_spectrometer.manufacturer _pdbx_nmr_spectrometer.model _pdbx_nmr_spectrometer.spectrometer_id _pdbx_nmr_spectrometer.type 600 Bruker Avance 1 'BRUKER AVANCE' 800 Bruker Avance 2 'BRUKER AVANCE' 600 Varian INOVA 3 'Varian INOVA' # _pdbx_nmr_refine.entry_id 2KAW _pdbx_nmr_refine.method 'simulated annealing, HADDOCK' _pdbx_nmr_refine.details 'NOE distance violation (<0.5A)' _pdbx_nmr_refine.software_ordinal 1 # _pdbx_nmr_details.entry_id 2KAW _pdbx_nmr_details.text ;THE STRUCTURE WAS DETERMINED WITH HADDOCK USING BASED ON A TOTAL OF 55 RESTRAINTS: 45 INTERMOLECULAR DISTANCE CONTRAINTS, 7 INTRAMOLECULAR DISTANCE CONTRAINTS FOR SMALL MOLECULE, AND 3 ARE DISTANCE RESTRAINTS FROM HYDROGEN BONDS ; # _pdbx_nmr_ensemble.average_constraint_violations_per_residue ? _pdbx_nmr_ensemble.average_constraints_per_residue ? _pdbx_nmr_ensemble.average_distance_constraint_violation ? _pdbx_nmr_ensemble.average_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.conformer_selection_criteria 'LOWEST ENERGY CONFORMATION' _pdbx_nmr_ensemble.conformers_calculated_total_number 2000 _pdbx_nmr_ensemble.conformers_submitted_total_number 20 _pdbx_nmr_ensemble.distance_constraint_violation_method ? _pdbx_nmr_ensemble.entry_id 2KAW _pdbx_nmr_ensemble.maximum_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_lower_distance_constraint_violation ? _pdbx_nmr_ensemble.maximum_torsion_angle_constraint_violation ? _pdbx_nmr_ensemble.maximum_upper_distance_constraint_violation ? _pdbx_nmr_ensemble.torsion_angle_constraint_violation_method ? # _pdbx_nmr_representative.conformer_id 1 _pdbx_nmr_representative.entry_id 2KAW _pdbx_nmr_representative.selection_criteria 'lowest energy' # loop_ _pdbx_nmr_software.authors _pdbx_nmr_software.classification _pdbx_nmr_software.name _pdbx_nmr_software.version _pdbx_nmr_software.ordinal 'Brunger, Adams, Clore, Gros, Nilges and Read' 'structure solution' HADDOCK 1.2 1 'Dominguez, Boelens, Bonvin' 'structure solution' HADDOCK 1.2 2 'Delaglio, Grzesiek, Vuister, Zhu, Pfeifer and Bax' processing NMRPIPE ? 3 Goddard 'chemical shift assignment' SPAKY 3.1 4 'Dominguez, Boelens, Bonvin' refinement HADDOCK 1.2 5 # _exptl.absorpt_coefficient_mu ? _exptl.absorpt_correction_T_max ? _exptl.absorpt_correction_T_min ? _exptl.absorpt_correction_type ? _exptl.absorpt_process_details ? _exptl.crystals_number ? _exptl.details ? _exptl.entry_id 2KAW _exptl.method 'SOLUTION NMR' _exptl.method_details ? # _struct.entry_id 2KAW _struct.title 'NMR structure of the mDvl1 PDZ domain in complex with its inhibitor' _struct.pdbx_descriptor 'Segment polarity protein dishevelled homolog DVL-1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 2KAW _struct_keywords.pdbx_keywords 'SIGNALING PROTEIN' _struct_keywords.text ;INHIBITOR OF PROTEIN-PROTEIN INTERACTIONS, PROTEIN STRUCTURE, PDZ DOMAIN, WNT SIGNALING, Developmental protein, Wnt signaling pathway, SIGNALING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # _struct_conf.conf_type_id HELX_P _struct_conf.id HELX_P1 _struct_conf.pdbx_PDB_helix_id 1 _struct_conf.beg_label_comp_id SER _struct_conf.beg_label_asym_id A _struct_conf.beg_label_seq_id 66 _struct_conf.pdbx_beg_PDB_ins_code ? _struct_conf.end_label_comp_id SER _struct_conf.end_label_asym_id A _struct_conf.end_label_seq_id 79 _struct_conf.pdbx_end_PDB_ins_code ? _struct_conf.beg_auth_comp_id SER _struct_conf.beg_auth_asym_id A _struct_conf.beg_auth_seq_id 66 _struct_conf.end_auth_comp_id SER _struct_conf.end_auth_asym_id A _struct_conf.end_auth_seq_id 79 _struct_conf.pdbx_PDB_helix_class 1 _struct_conf.details ? _struct_conf.pdbx_PDB_helix_length 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 2 ? LEU A 7 ? ILE A 2 LEU A 7 A 2 ILE A 84 ? ALA A 89 ? ILE A 84 ALA A 89 A 3 MET A 53 ? VAL A 57 ? MET A 53 VAL A 57 A 4 VAL A 60 ? ASN A 61 ? VAL A 60 ASN A 61 B 1 ILE A 17 ? GLY A 21 ? ILE A 17 GLY A 21 B 2 ILE A 31 ? ILE A 36 ? ILE A 31 ILE A 36 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 7 ? N LEU A 7 O ILE A 84 ? O ILE A 84 A 2 3 O THR A 87 ? O THR A 87 N LEU A 55 ? N LEU A 55 A 3 4 N VAL A 57 ? N VAL A 57 O VAL A 60 ? O VAL A 60 B 1 2 N VAL A 20 ? N VAL A 20 O TYR A 32 ? O TYR A 32 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 13 _struct_site.details 'BINDING SITE FOR RESIDUE SUZ A 91' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 13 MET A 9 ? MET A 9 . ? 1_555 ? 2 AC1 13 PHE A 14 ? PHE A 14 . ? 1_555 ? 3 AC1 13 LEU A 15 ? LEU A 15 . ? 1_555 ? 4 AC1 13 GLY A 16 ? GLY A 16 . ? 1_555 ? 5 AC1 13 ILE A 17 ? ILE A 17 . ? 1_555 ? 6 AC1 13 SER A 18 ? SER A 18 . ? 1_555 ? 7 AC1 13 ILE A 19 ? ILE A 19 . ? 1_555 ? 8 AC1 13 ASP A 68 ? ASP A 68 . ? 1_555 ? 9 AC1 13 VAL A 71 ? VAL A 71 . ? 1_555 ? 10 AC1 13 ARG A 72 ? ARG A 72 . ? 1_555 ? 11 AC1 13 VAL A 73 ? VAL A 73 . ? 1_555 ? 12 AC1 13 LEU A 74 ? LEU A 74 . ? 1_555 ? 13 AC1 13 ARG A 75 ? ARG A 75 . ? 1_555 ? # _atom_sites.entry_id 2KAW _atom_sites.fract_transf_matrix[1][1] 1.000000 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 1.000000 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 1.000000 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C F H N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ASN 1 1 1 ASN ASN A . n A 1 2 ILE 2 2 2 ILE ILE A . n A 1 3 ILE 3 3 3 ILE ILE A . n A 1 4 THR 4 4 4 THR THR A . n A 1 5 VAL 5 5 5 VAL VAL A . n A 1 6 THR 6 6 6 THR THR A . n A 1 7 LEU 7 7 7 LEU LEU A . n A 1 8 ASN 8 8 8 ASN ASN A . n A 1 9 MET 9 9 9 MET MET A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 ARG 11 11 11 ARG ARG A . n A 1 12 HIS 12 12 12 HIS HIS A . n A 1 13 HIS 13 13 13 HIS HIS A . n A 1 14 PHE 14 14 14 PHE PHE A . n A 1 15 LEU 15 15 15 LEU LEU A . n A 1 16 GLY 16 16 16 GLY GLY A . n A 1 17 ILE 17 17 17 ILE ILE A . n A 1 18 SER 18 18 18 SER SER A . n A 1 19 ILE 19 19 19 ILE ILE A . n A 1 20 VAL 20 20 20 VAL VAL A . n A 1 21 GLY 21 21 21 GLY GLY A . n A 1 22 GLN 22 22 22 GLN GLN A . n A 1 23 SER 23 23 23 SER SER A . n A 1 24 ASN 24 24 24 ASN ASN A . n A 1 25 ASP 25 25 25 ASP ASP A . n A 1 26 ARG 26 26 26 ARG ARG A . n A 1 27 GLY 27 27 27 GLY GLY A . n A 1 28 ASP 28 28 28 ASP ASP A . n A 1 29 GLY 29 29 29 GLY GLY A . n A 1 30 GLY 30 30 30 GLY GLY A . n A 1 31 ILE 31 31 31 ILE ILE A . n A 1 32 TYR 32 32 32 TYR TYR A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 GLY 34 34 34 GLY GLY A . n A 1 35 SER 35 35 35 SER SER A . n A 1 36 ILE 36 36 36 ILE ILE A . n A 1 37 MET 37 37 37 MET MET A . n A 1 38 LYS 38 38 38 LYS LYS A . n A 1 39 GLY 39 39 39 GLY GLY A . n A 1 40 GLY 40 40 40 GLY GLY A . n A 1 41 ALA 41 41 41 ALA ALA A . n A 1 42 VAL 42 42 42 VAL VAL A . n A 1 43 ALA 43 43 43 ALA ALA A . n A 1 44 ALA 44 44 44 ALA ALA A . n A 1 45 ASP 45 45 45 ASP ASP A . n A 1 46 GLY 46 46 46 GLY GLY A . n A 1 47 ARG 47 47 47 ARG ARG A . n A 1 48 ILE 48 48 48 ILE ILE A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 PRO 50 50 50 PRO PRO A . n A 1 51 GLY 51 51 51 GLY GLY A . n A 1 52 ASP 52 52 52 ASP ASP A . n A 1 53 MET 53 53 53 MET MET A . n A 1 54 LEU 54 54 54 LEU LEU A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 GLN 56 56 56 GLN GLN A . n A 1 57 VAL 57 57 57 VAL VAL A . n A 1 58 ASN 58 58 58 ASN ASN A . n A 1 59 ASP 59 59 59 ASP ASP A . n A 1 60 VAL 60 60 60 VAL VAL A . n A 1 61 ASN 61 61 61 ASN ASN A . n A 1 62 PHE 62 62 62 PHE PHE A . n A 1 63 GLU 63 63 63 GLU GLU A . n A 1 64 ASN 64 64 64 ASN ASN A . n A 1 65 MET 65 65 65 MET MET A . n A 1 66 SER 66 66 66 SER SER A . n A 1 67 ASN 67 67 67 ASN ASN A . n A 1 68 ASP 68 68 68 ASP ASP A . n A 1 69 ASP 69 69 69 ASP ASP A . n A 1 70 ALA 70 70 70 ALA ALA A . n A 1 71 VAL 71 71 71 VAL VAL A . n A 1 72 ARG 72 72 72 ARG ARG A . n A 1 73 VAL 73 73 73 VAL VAL A . n A 1 74 LEU 74 74 74 LEU LEU A . n A 1 75 ARG 75 75 75 ARG ARG A . n A 1 76 GLU 76 76 76 GLU GLU A . n A 1 77 ILE 77 77 77 ILE ILE A . n A 1 78 VAL 78 78 78 VAL VAL A . n A 1 79 SER 79 79 79 SER SER A . n A 1 80 GLN 80 80 80 GLN GLN A . n A 1 81 THR 81 81 81 THR THR A . n A 1 82 GLY 82 82 82 GLY GLY A . n A 1 83 PRO 83 83 83 PRO PRO A . n A 1 84 ILE 84 84 84 ILE ILE A . n A 1 85 SER 85 85 85 SER SER A . n A 1 86 LEU 86 86 86 LEU LEU A . n A 1 87 THR 87 87 87 THR THR A . n A 1 88 VAL 88 88 88 VAL VAL A . n A 1 89 ALA 89 89 89 ALA ALA A . n A 1 90 LYS 90 90 90 LYS LYS A . n # _pdbx_nonpoly_scheme.asym_id B _pdbx_nonpoly_scheme.entity_id 2 _pdbx_nonpoly_scheme.mon_id SUZ _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 91 _pdbx_nonpoly_scheme.auth_seq_num 91 _pdbx_nonpoly_scheme.pdb_mon_id SUZ _pdbx_nonpoly_scheme.auth_mon_id SUZ _pdbx_nonpoly_scheme.pdb_strand_id A _pdbx_nonpoly_scheme.pdb_ins_code . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2009-09-15 2 'Structure model' 1 1 2011-07-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Non-polymer description' 2 2 'Structure model' 'Version format compliance' # _pdbx_nmr_exptl_sample.component PDZ _pdbx_nmr_exptl_sample.concentration 1 _pdbx_nmr_exptl_sample.concentration_units mM _pdbx_nmr_exptl_sample.isotopic_labeling '[U-90% 15N, 13C]' _pdbx_nmr_exptl_sample.solution_id 1 # _pdbx_nmr_constraints.disulfide_bond_constraints_total_count ? _pdbx_nmr_constraints.entry_id 2KAW _pdbx_nmr_constraints.hydrogen_bond_constraints_total_count ? _pdbx_nmr_constraints.NA_alpha-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_beta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_chi-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_delta-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_epsilon-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_gamma-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_other-angle_constraints_total_count ? _pdbx_nmr_constraints.NA_sugar_pucker_constraints_total_count ? _pdbx_nmr_constraints.NOE_constraints_total 52 _pdbx_nmr_constraints.NOE_interentity_total_count ? _pdbx_nmr_constraints.NOE_interproton_distance_evaluation ? _pdbx_nmr_constraints.NOE_intraresidue_total_count ? _pdbx_nmr_constraints.NOE_long_range_total_count ? _pdbx_nmr_constraints.NOE_medium_range_total_count ? _pdbx_nmr_constraints.NOE_motional_averaging_correction ? _pdbx_nmr_constraints.NOE_pseudoatom_corrections ? _pdbx_nmr_constraints.NOE_sequential_total_count ? _pdbx_nmr_constraints.protein_chi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_other_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_phi_angle_constraints_total_count ? _pdbx_nmr_constraints.protein_psi_angle_constraints_total_count ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 2 H3 A ASN 1 ? ? O A LYS 90 ? ? 1.58 2 4 H3 A ASN 1 ? ? O A LYS 90 ? ? 1.59 3 8 OD2 A ASP 45 ? ? HH21 A ARG 47 ? ? 1.59 4 8 H3 A ASN 1 ? ? O A LYS 90 ? ? 1.60 5 9 OD2 A ASP 45 ? ? HH21 A ARG 47 ? ? 1.59 6 11 OD2 A ASP 45 ? ? HH21 A ARG 47 ? ? 1.59 7 18 H3 A ASN 1 ? ? O A LYS 90 ? ? 1.58 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 45 ? ? -95.18 -74.14 2 1 LEU A 55 ? ? -103.92 -64.77 3 1 ASP A 59 ? ? 77.39 -38.30 4 2 ASP A 45 ? ? -93.71 -69.03 5 2 LEU A 55 ? ? -90.62 -65.23 6 2 ASN A 58 ? ? 63.32 64.62 7 2 ASP A 59 ? ? 76.46 -48.04 8 3 ASN A 24 ? ? -142.05 -147.10 9 3 ARG A 26 ? ? -74.47 -77.34 10 3 ASP A 45 ? ? -93.06 -71.83 11 3 ASN A 58 ? ? 61.64 67.83 12 3 ASP A 59 ? ? 72.57 -46.01 13 4 ASP A 45 ? ? -102.15 -70.60 14 4 ASP A 59 ? ? 74.36 -18.68 15 5 ASN A 24 ? ? -100.45 -139.57 16 5 ASP A 45 ? ? -77.76 -73.07 17 5 PRO A 50 ? ? -57.46 106.91 18 5 LEU A 55 ? ? -97.52 -78.80 19 5 ASN A 58 ? ? 62.60 71.13 20 5 ASP A 59 ? ? 74.12 -52.35 21 5 ASN A 64 ? ? -119.20 56.66 22 6 ASN A 24 ? ? -156.22 -92.89 23 6 ASP A 45 ? ? -95.85 -70.29 24 6 LEU A 55 ? ? -102.81 -67.75 25 6 ASN A 58 ? ? 63.42 66.45 26 6 ASP A 59 ? ? 74.91 -44.36 27 7 ASP A 45 ? ? -100.96 -72.76 28 7 LEU A 55 ? ? -102.35 -71.58 29 7 ASP A 59 ? ? 76.33 -52.57 30 7 THR A 81 ? ? -109.35 74.88 31 8 ASN A 24 ? ? -123.65 -92.87 32 8 ASP A 28 ? ? -82.02 48.23 33 8 ASP A 45 ? ? -101.15 -74.01 34 8 LEU A 55 ? ? -102.97 -64.02 35 8 ASN A 58 ? ? 57.98 75.58 36 8 ASP A 59 ? ? 72.63 -51.76 37 9 ASN A 24 ? ? -174.86 -170.05 38 9 ARG A 26 ? ? -77.47 -70.09 39 9 ASP A 28 ? ? -83.25 39.54 40 9 ASP A 45 ? ? -96.83 -76.19 41 9 LEU A 55 ? ? -94.75 -69.30 42 9 ASN A 58 ? ? 51.86 74.52 43 9 ASP A 59 ? ? 75.45 -43.87 44 10 ASN A 24 ? ? -163.63 -160.94 45 10 ASP A 45 ? ? -77.41 -73.93 46 10 LEU A 55 ? ? -104.05 -74.79 47 10 ASN A 58 ? ? 60.17 72.60 48 10 ASP A 59 ? ? 72.90 -45.63 49 11 ASN A 24 ? ? -174.61 -161.33 50 11 ASP A 28 ? ? -79.70 47.36 51 11 ASP A 45 ? ? -84.68 -76.52 52 11 LEU A 55 ? ? -104.45 -60.77 53 11 ASN A 58 ? ? 62.40 61.30 54 11 ASP A 59 ? ? 74.78 -40.59 55 12 ASN A 24 ? ? -172.50 -160.62 56 12 ASP A 45 ? ? -100.66 -80.94 57 12 LEU A 55 ? ? -108.30 -77.59 58 12 ASP A 59 ? ? 78.34 -52.74 59 13 ASP A 45 ? ? -108.79 -67.06 60 13 LEU A 55 ? ? -97.05 -67.46 61 13 ASN A 58 ? ? 60.43 61.30 62 13 ASP A 59 ? ? 81.38 -45.18 63 14 ASN A 24 ? ? -163.57 -162.40 64 14 ASP A 45 ? ? -92.13 -64.30 65 14 LEU A 55 ? ? -94.87 -61.58 66 14 ASN A 58 ? ? 62.29 67.78 67 14 ASP A 59 ? ? 73.47 -54.22 68 15 ASN A 24 ? ? -102.70 -151.27 69 15 LEU A 55 ? ? -107.17 -68.15 70 15 ASP A 59 ? ? 78.50 -36.96 71 16 ASN A 24 ? ? -172.94 -175.25 72 16 ARG A 26 ? ? -84.87 -76.71 73 16 ASP A 59 ? ? 73.35 -14.74 74 17 LEU A 55 ? ? -103.60 -66.35 75 17 ASP A 59 ? ? 77.91 -45.91 76 18 ASN A 24 ? ? -165.37 -167.02 77 18 ASP A 28 ? ? -85.28 44.11 78 18 ASP A 45 ? ? -88.62 -73.29 79 18 LEU A 55 ? ? -103.04 -71.24 80 18 ASN A 58 ? ? 55.33 70.89 81 18 ASP A 59 ? ? 76.57 -50.51 82 19 ASN A 24 ? ? -163.84 -152.60 83 19 ASP A 45 ? ? -96.90 -81.42 84 19 LEU A 55 ? ? -100.44 -70.18 85 19 ASN A 58 ? ? 64.49 75.74 86 19 ASP A 59 ? ? 72.67 -51.27 87 20 ASP A 59 ? ? 76.82 -45.51 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name '[(1Z)-5-fluoro-2-methyl-1-{4-[methylsulfinyl]benzylidene}-1H-inden-3-yl]acetic acid' _pdbx_entity_nonpoly.comp_id SUZ #