HEADER LIGASE 19-DEC-08 2KCC TITLE SOLUTION STRUCTURE OF BIOTINOYL DOMAIN FROM HUMAN ACETYL-COA TITLE 2 CARBOXYLASE 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACETYL-COA CARBOXYLASE 2; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: BIOTINOYL DOMAIN, RESIDUES 891-964; COMPND 5 SYNONYM: ACC-BETA, BIOTIN CARBOXYLASE; COMPND 6 EC: 6.4.1.2, 6.3.4.14; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ACACB, ACC2, ACCB; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET-21B (+) KEYWDS ACETYL-COA CARBOXYLASE, BIOTINOYL DOMAIN, BCCP, BIRA, BIOTINYLATION, KEYWDS 2 ALTERNATIVE SPLICING, ATP-BINDING, BIOTIN, FATTY ACID BIOSYNTHESIS, KEYWDS 3 LIGASE, LIPID SYNTHESIS, MANGANESE, MEMBRANE, METAL-BINDING, KEYWDS 4 MULTIFUNCTIONAL ENZYME, NUCLEOTIDE-BINDING, PHOSPHOPROTEIN, KEYWDS 5 POLYMORPHISM EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR C.LEE,H.CHEONG,K.RYU,J.LEE,W.LEE,Y.JEON,C.CHEONG REVDAT 3 27-SEP-23 2KCC 1 REMARK REVDAT 2 16-MAR-22 2KCC 1 REMARK SEQADV REVDAT 1 17-FEB-09 2KCC 0 JRNL AUTH C.K.LEE,H.K.CHEONG,K.S.RYU,J.I.LEE,W.LEE,Y.H.JEON,C.CHEONG JRNL TITL BIOTINOYL DOMAIN OF HUMAN ACETYL-COA CARBOXYLASE: STRUCTURAL JRNL TITL 2 INSIGHTS INTO THE CARBOXYL TRANSFER MECHANISM. JRNL REF PROTEINS V. 72 613 2008 JRNL REFN ISSN 0887-3585 JRNL PMID 18247344 JRNL DOI 10.1002/PROT.21952 REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE REMARK 3 -KUNSTLEVE,JIANG,KUSZEWSKI,NILGES, PANNU,READ,RICE, REMARK 3 SIMONSON,WARREN REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KCC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-DEC-08. REMARK 100 THE DEPOSITION ID IS D_1000100944. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 293 REMARK 210 PH : 7.3 REMARK 210 IONIC STRENGTH : 0.05 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 50 MM HEPES-1, 1 MM DTT-2, 150 REMARK 210 MM SODIUM CHLORIDE-3, 90% H2O/10% REMARK 210 D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC REMARK 210 SPECTROMETER FIELD STRENGTH : 500 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : AVANCE REMARK 210 SPECTROMETER MANUFACTURER : BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NULL REMARK 210 METHOD USED : SIMULATED ANNEALING REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (RES=RESIDUE NAME; REMARK 470 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 470 MODELS 1-20 REMARK 470 RES CSSEQI ATOMS REMARK 470 ARG A 52 C O REMARK 470 VAL A 53 N CA CB CG1 CG2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 THR A 6 39.10 -90.75 REMARK 500 1 GLN A 18 -160.39 -166.95 REMARK 500 1 GLU A 22 -178.51 -68.30 REMARK 500 1 ALA A 34 -170.10 -172.56 REMARK 500 1 LYS A 40 -76.18 -77.08 REMARK 500 1 ALA A 65 97.74 -61.55 REMARK 500 1 ALA A 70 -163.70 -165.99 REMARK 500 1 HIS A 80 76.27 -102.54 REMARK 500 1 HIS A 83 115.77 -161.37 REMARK 500 2 ASN A 3 131.72 -170.29 REMARK 500 2 THR A 6 37.54 -90.84 REMARK 500 2 LEU A 16 97.14 -67.97 REMARK 500 2 GLN A 18 -161.05 -166.58 REMARK 500 2 GLU A 22 -178.57 -68.29 REMARK 500 2 ALA A 34 -172.77 -172.45 REMARK 500 2 LYS A 40 -72.45 -77.59 REMARK 500 2 ALA A 70 -163.82 -165.85 REMARK 500 3 THR A 6 42.68 -89.89 REMARK 500 3 LEU A 16 99.24 -68.07 REMARK 500 3 GLN A 18 -159.75 -166.92 REMARK 500 3 GLU A 22 -174.56 -68.12 REMARK 500 3 ALA A 34 -170.81 -172.39 REMARK 500 3 LYS A 40 -73.46 -77.51 REMARK 500 3 ALA A 65 96.10 -61.33 REMARK 500 3 ALA A 70 -166.59 -166.24 REMARK 500 3 LEU A 74 -75.10 -62.92 REMARK 500 3 ASP A 75 70.75 41.00 REMARK 500 4 ASN A 3 65.44 -113.55 REMARK 500 4 THR A 6 40.82 -90.15 REMARK 500 4 LEU A 16 96.56 -67.93 REMARK 500 4 GLN A 18 -163.11 -166.60 REMARK 500 4 GLU A 22 -178.66 -68.26 REMARK 500 4 ALA A 34 -172.55 -172.55 REMARK 500 4 LYS A 40 -72.99 -77.64 REMARK 500 4 ALA A 65 99.74 -61.57 REMARK 500 4 ALA A 70 -159.59 -165.97 REMARK 500 5 THR A 6 36.79 -90.71 REMARK 500 5 GLN A 18 -160.38 -166.58 REMARK 500 5 GLU A 22 -178.70 -68.36 REMARK 500 5 ALA A 34 -169.34 -172.40 REMARK 500 5 LYS A 40 -76.01 -76.96 REMARK 500 5 ILE A 56 -60.71 -105.36 REMARK 500 5 ALA A 65 96.11 -61.41 REMARK 500 5 ALA A 70 -164.98 -165.91 REMARK 500 5 HIS A 83 121.90 -170.22 REMARK 500 6 LEU A 16 97.43 -68.03 REMARK 500 6 GLN A 18 -160.29 -166.54 REMARK 500 6 GLU A 22 -179.02 -68.30 REMARK 500 6 ALA A 34 -169.80 -172.25 REMARK 500 6 LYS A 40 -73.75 -77.80 REMARK 500 REMARK 500 THIS ENTRY HAS 182 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL DBREF 2KCC A 2 76 UNP O00763 ACACB_HUMAN 891 965 SEQADV 2KCC MET A 1 UNP O00763 INITIATING METHIONINE SEQADV 2KCC LEU A 77 UNP O00763 EXPRESSION TAG SEQADV 2KCC GLU A 78 UNP O00763 EXPRESSION TAG SEQADV 2KCC HIS A 79 UNP O00763 EXPRESSION TAG SEQADV 2KCC HIS A 80 UNP O00763 EXPRESSION TAG SEQADV 2KCC HIS A 81 UNP O00763 EXPRESSION TAG SEQADV 2KCC HIS A 82 UNP O00763 EXPRESSION TAG SEQADV 2KCC HIS A 83 UNP O00763 EXPRESSION TAG SEQADV 2KCC HIS A 84 UNP O00763 EXPRESSION TAG SEQRES 1 A 84 MET GLU ASN ASP PRO THR VAL LEU ARG SER PRO SER ALA SEQRES 2 A 84 GLY LYS LEU THR GLN TYR THR VAL GLU ASP GLY GLY HIS SEQRES 3 A 84 VAL GLU ALA GLY SER SER TYR ALA GLU MET GLU VAL MET SEQRES 4 A 84 LYS MET ILE MET THR LEU ASN VAL GLN GLU ARG GLY ARG SEQRES 5 A 84 VAL LYS TYR ILE LYS ARG PRO GLY ALA VAL LEU GLU ALA SEQRES 6 A 84 GLY CYS VAL VAL ALA ARG LEU GLU LEU ASP ASP LEU GLU SEQRES 7 A 84 HIS HIS HIS HIS HIS HIS SHEET 1 A 4 VAL A 7 LEU A 8 0 SHEET 2 A 4 ALA A 70 GLU A 73 -1 O ALA A 70 N LEU A 8 SHEET 3 A 4 GLY A 51 TYR A 55 -1 N ARG A 52 O GLU A 73 SHEET 4 A 4 GLY A 25 VAL A 27 -1 N VAL A 27 O GLY A 51 SHEET 1 B 3 LEU A 16 TYR A 19 0 SHEET 2 B 3 SER A 32 GLU A 37 -1 O GLU A 35 N GLN A 18 SHEET 3 B 3 ILE A 42 ASN A 46 -1 O LEU A 45 N TYR A 33 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1