HEADER HORMONE 04-JAN-09 2KD5 OBSLTE 28-JUL-10 2KD5 2KVK TITLE SOLUTION STRUCTURE OF ADF/COFILIN (LDCOF) FROM LEISHMANIA DONOVANI COMPND MOL_ID: 1; COMPND 2 MOLECULE: ACTIN SEVERING AND DYNAMICS REGULATORY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: ADF H; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: LEISHMANIA DONOVANI; SOURCE 3 ORGANISM_TAXID: 5661; SOURCE 4 GENE: COFILIN; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21 DE3; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: VECTOR; SOURCE 9 EXPRESSION_SYSTEM_VECTOR: PET-21D KEYWDS ADF, COFILIN, LEISHMANIA DONOVANI, SOLUTION STRUCTURE, HORMONE EXPDTA SOLUTION NMR NUMMDL 20 AUTHOR P.P.PATHAK,S.V.S.R.K.PULAVARTI,A.JAIN,A.A.SAHASRABUDDHE,C.M.GUPTA, AUTHOR 2 A.ARORA REVDAT 2 28-JUL-10 2KD5 1 OBSLTE REVDAT 1 12-JAN-10 2KD5 0 JRNL AUTH P.P.PATHAK,S.V.S.R.K.PULAVARTI,A.JAIN,A.A.SAHASRABUDDHE, JRNL AUTH 2 C.M.GUPTA,A.ARORA JRNL TITL SOLUTION STRUCTURE OF ADF/COFILIN (LDCOF) FROM LEISHMANIA JRNL TITL 2 DONOVANI JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. NOT APPLICABLE. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CYANA 3.0 REMARK 3 AUTHORS : GUNTERT, MUMENTHALER AND WUTHRICH REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 2KD5 COMPLIES WITH FORMAT V. 3.20, 01-DEC-08 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 06-JAN-09. REMARK 100 THE RCSB ID CODE IS RCSB100972. REMARK 210 REMARK 210 EXPERIMENTAL DETAILS REMARK 210 EXPERIMENT TYPE : NMR REMARK 210 TEMPERATURE (KELVIN) : 298 REMARK 210 PH : 6.5 REMARK 210 IONIC STRENGTH : 50 REMARK 210 PRESSURE : AMBIENT REMARK 210 SAMPLE CONTENTS : 20MM SODIUM PHOSPHATE-1, 50MM REMARK 210 SODIUM CHLORIDE-2, 1% SODIUM REMARK 210 AZIDE-3, 1MM AEBSF PROTEASE REMARK 210 INHIBITOR-4, 95% H2O-5, 5% [U-99% REMARK 210 2H] D2O-6, 1MM DTT-7, 95% H2O/5% REMARK 210 D2O; 20MM SODIUM PHOSPHATE-8, REMARK 210 50MM SODIUM CHLORIDE-9, 1% SODIUM REMARK 210 AZIDE-10, 1MM AEBSF PROTEASE REMARK 210 INHIBITOR-11, 95% H2O-12, 5% [U- REMARK 210 99% 2H] D2O-13, 1MM DTT-14, 95% REMARK 210 H2O/5% D2O; 20MM SODIUM PHOSPHATE REMARK 210 -15, 50MM SODIUM CHLORIDE-16, 1% REMARK 210 SODIUM AZIDE-17, 1MM AEBSF REMARK 210 PROTEASE INHIBITOR-18, 0% H2O-19, REMARK 210 100% [U-99% 2H] D2O-20, 1MM DTT- REMARK 210 21, 100% D2O REMARK 210 REMARK 210 NMR EXPERIMENTS CONDUCTED : 2D 1H-15N HSQC; 2D 1H-13C HSQC; REMARK 210 3D HNCA; 3D HNCACB; 3D CBCA(CO) REMARK 210 NH; 3D HNCO; 3D H(CA)CO; 3D REMARK 210 H(CCO)NH-TOCSY; 3D C(CO)NH-TOCSY; REMARK 210 3D HCCH-TOCSY; 3D 1H-15N NOESY; REMARK 210 3D 1H-13C NOESY REMARK 210 SPECTROMETER FIELD STRENGTH : 600 MHZ; 800 MHZ REMARK 210 SPECTROMETER MODEL : INOVA; AVANCE REMARK 210 SPECTROMETER MANUFACTURER : VARIAN; BRUKER REMARK 210 REMARK 210 STRUCTURE DETERMINATION. REMARK 210 SOFTWARE USED : NMRPIPE, CYANA 2.1, CARA 1.8.4 REMARK 210 METHOD USED : TORSION ANGLE DYNAMICS REMARK 210 REMARK 210 CONFORMERS, NUMBER CALCULATED : 100 REMARK 210 CONFORMERS, NUMBER SUBMITTED : 20 REMARK 210 CONFORMERS, SELECTION CRITERIA : TARGET FUNCTION REMARK 210 REMARK 210 BEST REPRESENTATIVE CONFORMER IN THIS ENSEMBLE : 1 REMARK 210 REMARK 210 REMARK: NULL REMARK 215 REMARK 215 NMR STUDY REMARK 215 THE COORDINATES IN THIS ENTRY WERE GENERATED FROM SOLUTION REMARK 215 NMR DATA. PROTEIN DATA BANK CONVENTIONS REQUIRE THAT REMARK 215 CRYST1 AND SCALE RECORDS BE INCLUDED, BUT THE VALUES ON REMARK 215 THESE RECORDS ARE MEANINGLESS. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HB VAL A 65 HB ILE A 84 1.59 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 1 ALA A 2 -37.49 -177.98 REMARK 500 1 SER A 4 41.30 -154.08 REMARK 500 1 ARG A 25 -65.43 72.65 REMARK 500 1 GLU A 45 35.05 -148.51 REMARK 500 1 ARG A 46 -9.54 69.67 REMARK 500 1 THR A 51 44.20 -84.30 REMARK 500 1 ASP A 52 -47.01 -150.67 REMARK 500 1 THR A 59 124.16 173.47 REMARK 500 1 VAL A 65 89.02 -62.30 REMARK 500 1 ALA A 66 89.84 -67.77 REMARK 500 1 ILE A 87 78.89 -153.09 REMARK 500 1 ASP A 89 68.75 64.65 REMARK 500 1 ALA A 91 -112.94 -65.42 REMARK 500 1 ARG A 92 -52.31 165.10 REMARK 500 1 PRO A 93 -156.83 -69.74 REMARK 500 1 SER A 110 -72.56 -104.29 REMARK 500 1 PRO A 115 91.62 -69.71 REMARK 500 1 ASP A 120 99.18 166.36 REMARK 500 1 VAL A 133 -74.28 -76.45 REMARK 500 1 HIS A 136 45.04 -104.14 REMARK 500 1 ARG A 137 -53.50 -157.16 REMARK 500 1 SER A 138 42.25 -94.33 REMARK 500 1 ALA A 142 -171.21 57.11 REMARK 500 2 SER A 4 34.06 -179.98 REMARK 500 2 THR A 7 -168.77 -103.87 REMARK 500 2 GLU A 10 41.05 -91.23 REMARK 500 2 ARG A 25 -63.55 72.17 REMARK 500 2 CYS A 30 145.77 -172.39 REMARK 500 2 VAL A 40 105.93 -49.96 REMARK 500 2 GLU A 45 36.14 -144.85 REMARK 500 2 ARG A 46 -9.86 69.82 REMARK 500 2 THR A 51 40.83 -91.98 REMARK 500 2 ASP A 52 -54.66 -150.38 REMARK 500 2 LYS A 56 -72.45 -86.22 REMARK 500 2 PHE A 57 -161.88 44.77 REMARK 500 2 SER A 58 -81.57 66.24 REMARK 500 2 VAL A 65 89.16 -62.41 REMARK 500 2 ALA A 66 92.87 -68.55 REMARK 500 2 LYS A 77 98.04 -69.45 REMARK 500 2 ILE A 87 80.49 -156.33 REMARK 500 2 ASP A 89 68.60 65.89 REMARK 500 2 THR A 90 30.24 -156.97 REMARK 500 2 ALA A 91 -121.76 -110.34 REMARK 500 2 SER A 110 -69.99 -109.05 REMARK 500 2 GLU A 111 18.45 59.87 REMARK 500 2 PRO A 115 89.10 -69.74 REMARK 500 2 ASP A 120 98.95 167.73 REMARK 500 2 GLU A 121 26.26 48.95 REMARK 500 2 ARG A 137 -32.51 -143.24 REMARK 500 2 SER A 138 12.38 -141.02 REMARK 500 REMARK 500 THIS ENTRY HAS 483 RAMACHANDRAN OUTLIERS. REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 15557 RELATED DB: BMRB DBREF 2KD5 A 1 142 UNP Q2QKR1 Q2QKR1_LEIDO 1 142 SEQADV 2KD5 LEU A 143 UNP Q2QKR1 EXPRESSION TAG SEQADV 2KD5 GLU A 144 UNP Q2QKR1 EXPRESSION TAG SEQRES 1 A 144 MET ALA ILE SER GLY VAL THR LEU GLU GLU SER VAL ARG SEQRES 2 A 144 GLY ALA ILE ASP ASP LEU ARG MET LYS LYS SER ARG TYR SEQRES 3 A 144 VAL MET MET CYS ILE GLY ALA ASP GLY LYS LYS ILE GLU SEQRES 4 A 144 VAL THR GLU VAL GLY GLU ARG SER VAL ASN TYR THR ASP SEQRES 5 A 144 LEU LYS GLU LYS PHE SER THR GLU LYS PRO CYS TYR VAL SEQRES 6 A 144 ALA PHE ASP PHE GLU TYR ASN ASP ALA GLY SER LYS ARG SEQRES 7 A 144 GLU LYS LEU ILE LEU ILE GLN TRP ILE PRO ASP THR ALA SEQRES 8 A 144 ARG PRO ARG GLU LYS MET MET TYR SER ALA SER ARG ASP SEQRES 9 A 144 ALA LEU SER SER VAL SER GLU GLY TYR LEU PRO ILE GLN SEQRES 10 A 144 ALA ASN ASP GLU SER GLY LEU ASP ALA GLU GLU ILE ILE SEQRES 11 A 144 ARG LYS VAL ARG LEU HIS ARG SER VAL ALA ALA ALA LEU SEQRES 12 A 144 GLU HELIX 1 1 GLU A 9 ARG A 20 1 12 HELIX 2 2 ASN A 49 LYS A 54 1 6 HELIX 3 3 PRO A 93 ARG A 103 1 11 HELIX 4 4 ASP A 104 SER A 107 5 4 HELIX 5 5 ASP A 125 HIS A 136 1 12 SHEET 1 A 5 ILE A 38 VAL A 43 0 SHEET 2 A 5 TYR A 26 ILE A 31 -1 N CYS A 30 O GLU A 39 SHEET 3 A 5 CYS A 63 ASN A 72 -1 O ALA A 66 N VAL A 27 SHEET 4 A 5 LYS A 77 TRP A 86 -1 O LYS A 80 N PHE A 69 SHEET 5 A 5 LEU A 114 ALA A 118 1 O ILE A 116 N GLN A 85 CRYST1 1.000 1.000 1.000 90.00 90.00 90.00 P 1 1 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 1.000000 0.000000 0.000000 0.00000 SCALE2 0.000000 1.000000 0.000000 0.00000 SCALE3 0.000000 0.000000 1.000000 0.00000 MODEL 1